Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 112 |
| Acc36I | ACCTGC | 1 cut(s) | 129 |
| AccII | CGCG | 3 cut(s) | 306, 684, 1916 |
| AclI | AACGTT | 1 cut(s) | 533 |
| AclWI | GGATC | 5 cut(s) | 758, 1289, 1926, 2318, 2436 |
| AcoI | YGGCCR | 2 cut(s) | 1256, 1281 |
| AcsI | RAATTY | 1 cut(s) | 698 |
| AcuI | CTGAAG | 2 cut(s) | 453, 843 |
| AcyI | GRCGYC | 2 cut(s) | 109, 1635 |
| AdeI | CACNNNGTG | 1 cut(s) | 380 |
| AfaI | GTAC | 8 cut(s) | 410, 737, 891, 948, 1684, 1971, 2261, 2462 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 165, 499, 788, 1740, 2416 |
| AflII | CTTAAG | 1 cut(s) | 2378 |
| AflIII | ACRYGT | 2 cut(s) | 379, 539 |
| AgeI | ACCGGT | 1 cut(s) | 827 |
| AgsI | TTSAA | 8 cut(s) | 40, 179, 1024, 1046, 1250, 2522, 2530, 2632 |
| AjnI | CCWGG | 2 cut(s) | 1570, 1899 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 237, 269, 572, 604, 996, 1028, 2448, 2480 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2652, 2684 |
| Alw21I | GWGCWC | 2 cut(s) | 660, 1792 |
| Alw26I | GTCTC | 9 cut(s) | 32, 59, 287, 656, 839, 891, 1182, 1820, 2136 |
| Alw44I | GTGCAC | 1 cut(s) | 1788 |
| AlwI | GGATC | 5 cut(s) | 758, 1289, 1926, 2318, 2436 |
| Ama87I | CYCGRG | 2 cut(s) | 659, 1841 |
| ApaLI | GTGCAC | 1 cut(s) | 1788 |
| ApeKI | GCWGC | 3 cut(s) | 953, 2240, 2513 |
| ApoI | RAATTY | 1 cut(s) | 698 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1181, 1213, 1979, 2011 |
| AsiGI | ACCGGT | 1 cut(s) | 827 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 207, 252, 1011, 1053 |
| AspLEI | GCGC | 2 cut(s) | 338, 717 |
| AspS9I | GGNCC | 6 cut(s) | 241, 387, 443, 556, 1839, 2490 |
| AsuC2I | CCSGG | 4 cut(s) | 519, 1280, 1842, 1843 |
| AsuHPI | GGTGA | 8 cut(s) | 148, 707, 761, 1304, 2053, 2215, 2225, 2439 |
| AvaI | CYCGRG | 2 cut(s) | 659, 1841 |
| AvaII | GGWCC | 1 cut(s) | 443 |
| AxyI | CCTNAGG | 1 cut(s) | 2227 |
| BaeGI | GKGCMC | 2 cut(s) | 926, 1792 |
| BanII | GRGCYC | 1 cut(s) | 660 |
| BauI | CACGAG | 1 cut(s) | 1785 |
| BbsI | GAAGAC | 4 cut(s) | 148, 372, 441, 1555 |
| Bbv12I | GWGCWC | 2 cut(s) | 660, 1792 |
| BbvCI | CCTCAGC | 2 cut(s) | 1481, 1941 |
| BbvI | GCAGC | 3 cut(s) | 965, 2252, 2500 |
| BccI | CCATC | 7 cut(s) | 464, 486, 974, 2000, 2103, 2398, 2410 |
| BceAI | ACGGC | 5 cut(s) | 255, 929, 1243, 1268, 1856 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 275, 309, 1181, 1215 |
| BciT130I | CCWGG | 2 cut(s) | 1572, 1901 |
| BciVI | GTATCC | 2 cut(s) | 224, 2267 |
| BclI | TGATCA | 1 cut(s) | 2082 |
| BcnI | CCSGG | 4 cut(s) | 519, 1280, 1842, 1843 |
| BcoDI | GTCTC | 9 cut(s) | 32, 59, 287, 656, 839, 891, 1182, 1820, 2136 |
| BfaI | CTAG | 5 cut(s) | 1244, 1274, 1464, 2411, 2549 |
| BfmI | CTRYAG | 1 cut(s) | 912 |
| BfoI | RGCGCY | 1 cut(s) | 339 |
| BfrI | CTTAAG | 1 cut(s) | 2378 |
| BfuAI | ACCTGC | 1 cut(s) | 129 |
| BfuI | GTATCC | 2 cut(s) | 224, 2267 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 950 |
| BisI | GCNGC | 5 cut(s) | 307, 954, 1704, 2241, 2514 |
| BlsI | GCNGC | 5 cut(s) | 308, 955, 1705, 2242, 2515 |
| Bme1390I | CCNGG | 6 cut(s) | 519, 1280, 1572, 1842, 1843, 1901 |
| Bme18I | GGWCC | 1 cut(s) | 443 |
| BmeT110I | CYCGRG | 2 cut(s) | 659, 1841 |
| BmgT120I | GGNCC | 6 cut(s) | 241, 387, 443, 556, 1839, 2490 |
| BmiI | GGNNCC | 3 cut(s) | 454, 558, 1689 |
| BmrFI | CCNGG | 6 cut(s) | 519, 1280, 1572, 1842, 1843, 1901 |
| BmrI | ACTGGG | 1 cut(s) | 1145 |
| BmsI | GCATC | 8 cut(s) | 417, 1060, 1135, 1570, 1738, 1759, 2014, 2492 |
| BmuI | ACTGGG | 1 cut(s) | 1145 |
| BpiI | GAAGAC | 4 cut(s) | 148, 372, 441, 1555 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 893, 925 |
| BpmI | CTGGAG | 4 cut(s) | 14, 278, 1121, 2622 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1481, 1941 |
| BpuEI | CTTGAG | 2 cut(s) | 479, 1107 |
| BpuMI | CCSGG | 4 cut(s) | 519, 1280, 1842, 1843 |
| BsaHI | GRCGYC | 2 cut(s) | 109, 1635 |
| BsaI | GGTCTC | 2 cut(s) | 287, 656 |
| BsaWI | WCCGGW | 3 cut(s) | 781, 827, 2657 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 83, 113, 1074, 1104, 2595, 2625 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 165, 499, 788, 1740, 2416 |
| Bse118I | RCCGGY | 3 cut(s) | 827, 1217, 1637 |
| Bse1I | ACTGG | 4 cut(s) | 446, 954, 1138, 1151 |
| Bse21I | CCTNAGG | 1 cut(s) | 2227 |
| Bse3DI | GCAATG | 2 cut(s) | 291, 314 |
| BseBI | CCWGG | 2 cut(s) | 1572, 1901 |
| BseGI | GGATG | 6 cut(s) | 802, 1075, 1729, 1750, 2029, 2114 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 165, 499, 788, 1740, 2416 |
| BseMI | GCAATG | 2 cut(s) | 291, 314 |
| BseMII | CTCAG | 7 cut(s) | 70, 151, 989, 1495, 1932, 2241, 2634 |
| BseNI | ACTGG | 4 cut(s) | 446, 954, 1138, 1151 |
| BseRI | GAGGAG | 2 cut(s) | 668, 917 |
| BseSI | GKGCMC | 2 cut(s) | 926, 1792 |
| BseX3I | CGGCCG | 1 cut(s) | 1281 |
| BseXI | GCAGC | 3 cut(s) | 965, 2252, 2500 |
| Bsh1236I | CGCG | 3 cut(s) | 306, 684, 1916 |
| Bsh1285I | CGRYCG | 2 cut(s) | 832, 1284 |
| BshTI | ACCGGT | 1 cut(s) | 827 |
| BsiEI | CGRYCG | 2 cut(s) | 832, 1284 |
| BsiHKAI | GWGCWC | 2 cut(s) | 660, 1792 |
| BsiHKCI | CYCGRG | 2 cut(s) | 659, 1841 |
| BsiSI | CCGG | 8 cut(s) | 519, 782, 828, 1218, 1280, 1638, 1842, 2658 |
| BslFI | GGGAC | 1 cut(s) | 984 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 165, 499, 788, 1740, 2416 |
| BsmAI | GTCTC | 9 cut(s) | 32, 59, 287, 656, 839, 891, 1182, 1820, 2136 |
| BsmBI | CGTCTC | 2 cut(s) | 891, 1182 |
| BsmFI | GGGAC | 1 cut(s) | 984 |
| BsmI | GAATGC | 3 cut(s) | 1053, 1236, 2316 |
| Bso31I | GGTCTC | 2 cut(s) | 287, 656 |
| BsoBI | CYCGRG | 2 cut(s) | 659, 1841 |
| Bsp1286I | GDGCHC | 3 cut(s) | 660, 926, 1792 |
| Bsp1407I | TGTACA | 1 cut(s) | 735 |
| Bsp143I | GATC | 9 cut(s) | 96, 311, 763, 978, 1294, 1918, 2082, 2323, 2428 |
| Bsp19I | CCATGG | 1 cut(s) | 1770 |
| BspCNI | CTCAG | 7 cut(s) | 69, 150, 988, 1494, 1933, 2240, 2635 |
| BspFNI | CGCG | 3 cut(s) | 306, 684, 1916 |
| BspHI | TCATGA | 2 cut(s) | 1399, 1630 |
| BspLI | GGNNCC | 3 cut(s) | 454, 558, 1689 |
| BspMI | ACCTGC | 1 cut(s) | 129 |
| BspPI | GGATC | 5 cut(s) | 758, 1289, 1926, 2318, 2436 |
| BspQI | GCTCTTC | 1 cut(s) | 963 |
| BspTI | CTTAAG | 1 cut(s) | 2378 |
| BspTNI | GGTCTC | 2 cut(s) | 287, 656 |
| BsrDI | GCAATG | 2 cut(s) | 291, 314 |
| BsrFI | RCCGGY | 3 cut(s) | 827, 1217, 1637 |
| BsrGI | TGTACA | 1 cut(s) | 735 |
| BsrI | ACTGG | 4 cut(s) | 446, 954, 1138, 1151 |
| BssAI | RCCGGY | 3 cut(s) | 827, 1217, 1637 |
| BssMI | GATC | 9 cut(s) | 96, 311, 763, 978, 1294, 1918, 2082, 2323, 2428 |
| BssNI | GRCGYC | 2 cut(s) | 109, 1635 |
| BssSI | CACGAG | 1 cut(s) | 1785 |
| BssT1I | CCWWGG | 6 cut(s) | 812, 918, 1065, 1770, 2104, 2159 |
| Bst2BI | CACGAG | 1 cut(s) | 1785 |
| Bst2UI | CCWGG | 2 cut(s) | 1572, 1901 |
| Bst4CI | ACNGT | 5 cut(s) | 196, 361, 486, 1354, 2259 |
| Bst6I | CTCTTC | 5 cut(s) | 243, 862, 963, 1245, 2451 |
| BstACI | GRCGYC | 2 cut(s) | 109, 1635 |
| BstAFI | CTTAAG | 1 cut(s) | 2378 |
| BstAUI | TGTACA | 1 cut(s) | 735 |
| BstC8I | GCNNGC | 6 cut(s) | 1075, 1204, 1219, 1595, 1792, 2537 |
| BstDSI | CCRYGG | 4 cut(s) | 304, 1770, 1914, 2137 |
| BstEII | GGTNACC | 4 cut(s) | 154, 749, 2221, 2231 |
| BstF5I | GGATG | 6 cut(s) | 802, 1075, 1729, 1750, 2029, 2114 |
| BstFNI | CGCG | 3 cut(s) | 306, 684, 1916 |
| BstH2I | RGCGCY | 1 cut(s) | 339 |
| BstHHI | GCGC | 2 cut(s) | 338, 717 |
| BstKTI | GATC | 9 cut(s) | 99, 314, 766, 981, 1297, 1921, 2085, 2326, 2431 |
| BstMAI | GTCTC | 9 cut(s) | 32, 59, 287, 656, 839, 891, 1182, 1820, 2136 |
| BstMBI | GATC | 9 cut(s) | 96, 311, 763, 978, 1294, 1918, 2082, 2323, 2428 |
| BstMCI | CGRYCG | 2 cut(s) | 832, 1284 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 167, 325, 681, 950, 1491, 2489, 2632 |
| BstNI | CCWGG | 2 cut(s) | 1572, 1901 |
| BstNSI | RCATGY | 1 cut(s) | 543 |
| BstPI | GGTNACC | 4 cut(s) | 154, 749, 2221, 2231 |
| BstSCI | CCNGG | 6 cut(s) | 517, 1278, 1570, 1840, 1841, 1899 |
| BstSFI | CTRYAG | 1 cut(s) | 912 |
| BstSLI | GKGCMC | 2 cut(s) | 926, 1792 |
| BstUI | CGCG | 3 cut(s) | 306, 684, 1916 |
| BstV1I | GCAGC | 3 cut(s) | 965, 2252, 2500 |
| BstV2I | GAAGAC | 4 cut(s) | 148, 372, 441, 1555 |
| BstX2I | RGATCY | 3 cut(s) | 1918, 2323, 2428 |
| BstYI | RGATCY | 3 cut(s) | 1918, 2323, 2428 |
| BstZI | CGGCCG | 1 cut(s) | 1281 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2227 |
| BsuI | GTATCC | 2 cut(s) | 224, 2267 |
| BtgI | CCRYGG | 4 cut(s) | 304, 1770, 1914, 2137 |
| BtgZI | GCGATG | 2 cut(s) | 1500, 2376 |
| BtsCI | GGATG | 6 cut(s) | 802, 1075, 1729, 1750, 2029, 2114 |
| BtsIMutI | CAGTG | 2 cut(s) | 201, 453 |
| BveI | ACCTGC | 1 cut(s) | 129 |
| Cac8I | GCNNGC | 6 cut(s) | 1075, 1204, 1219, 1595, 1792, 2537 |
| CciI | TCATGA | 2 cut(s) | 1399, 1630 |
| CfoI | GCGC | 2 cut(s) | 338, 717 |
| Cfr10I | RCCGGY | 3 cut(s) | 827, 1217, 1637 |
| Cfr13I | GGNCC | 6 cut(s) | 241, 387, 443, 556, 1839, 2490 |
| Cfr42I | CCGCGG | 2 cut(s) | 307, 1917 |
| Cfr9I | CCCGGG | 1 cut(s) | 1841 |
| CseI | GACGC | 1 cut(s) | 1643 |
| Csp6I | GTAC | 8 cut(s) | 409, 736, 890, 947, 1683, 1970, 2260, 2461 |
| CspAI | ACCGGT | 1 cut(s) | 827 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1795, 1830, 2093, 2128 |
| CviQI | GTAC | 8 cut(s) | 409, 736, 890, 947, 1683, 1970, 2260, 2461 |
| DpnI | GATC | 9 cut(s) | 98, 313, 765, 980, 1296, 1920, 2084, 2325, 2430 |
| DpnII | GATC | 9 cut(s) | 96, 311, 763, 978, 1294, 1918, 2082, 2323, 2428 |
| DraIII | CACNNNGTG | 1 cut(s) | 380 |
| EaeI | YGGCCR | 2 cut(s) | 1256, 1281 |
| EagI | CGGCCG | 1 cut(s) | 1281 |
| Eam1104I | CTCTTC | 5 cut(s) | 243, 862, 963, 1245, 2451 |
| EarI | CTCTTC | 5 cut(s) | 243, 862, 963, 1245, 2451 |
| Ecl136II | GAGCTC | 1 cut(s) | 658 |
| EclXI | CGGCCG | 1 cut(s) | 1281 |
| Eco130I | CCWWGG | 6 cut(s) | 812, 918, 1065, 1770, 2104, 2159 |
| Eco147I | AGGCCT | 2 cut(s) | 795, 1504 |
| Eco24I | GRGCYC | 1 cut(s) | 660 |
| Eco31I | GGTCTC | 2 cut(s) | 287, 656 |
| Eco32I | GATATC | 1 cut(s) | 301 |
| Eco47I | GGWCC | 1 cut(s) | 443 |
| Eco52I | CGGCCG | 1 cut(s) | 1281 |
| Eco53kI | GAGCTC | 1 cut(s) | 658 |
| Eco57I | CTGAAG | 2 cut(s) | 453, 843 |
| Eco81I | CCTNAGG | 1 cut(s) | 2227 |
| Eco88I | CYCGRG | 2 cut(s) | 659, 1841 |
| Eco91I | GGTNACC | 4 cut(s) | 154, 749, 2221, 2231 |
| EcoICRI | GAGCTC | 1 cut(s) | 658 |
| EcoO65I | GGTNACC | 4 cut(s) | 154, 749, 2221, 2231 |
| EcoRII | CCWGG | 2 cut(s) | 1570, 1899 |
| EcoRV | GATATC | 1 cut(s) | 301 |
| EcoT14I | CCWWGG | 6 cut(s) | 812, 918, 1065, 1770, 2104, 2159 |
| EcoT22I | ATGCAT | 2 cut(s) | 1731, 1855 |
| EcoT38I | GRGCYC | 1 cut(s) | 660 |
| ErhI | CCWWGG | 6 cut(s) | 812, 918, 1065, 1770, 2104, 2159 |
| Esp3I | CGTCTC | 2 cut(s) | 891, 1182 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 593, 625, 2361, 2393 |
| FaqI | GGGAC | 1 cut(s) | 984 |
| FauI | CCCGC | 2 cut(s) | 515, 1921 |
| FauNDI | CATATG | 1 cut(s) | 1417 |
| FbaI | TGATCA | 1 cut(s) | 2082 |
| Fnu4HI | GCNGC | 5 cut(s) | 307, 954, 1704, 2241, 2514 |
| FokI | GGATG | 6 cut(s) | 789, 1082, 1716, 1737, 2036, 2121 |
| FriOI | GRGCYC | 1 cut(s) | 660 |
| Fsp4HI | GCNGC | 5 cut(s) | 307, 954, 1704, 2241, 2514 |
| FspBI | CTAG | 5 cut(s) | 1244, 1274, 1464, 2411, 2549 |
| GlaI | GCGC | 2 cut(s) | 337, 716 |
| GluI | GCNGC | 5 cut(s) | 307, 954, 1704, 2241, 2514 |
| GsuI | CTGGAG | 4 cut(s) | 14, 278, 1121, 2622 |
| HaeII | RGCGCY | 1 cut(s) | 339 |
| HapII | CCGG | 8 cut(s) | 519, 782, 828, 1218, 1280, 1638, 1842, 2658 |
| HgaI | GACGC | 1 cut(s) | 1643 |
| HhaI | GCGC | 2 cut(s) | 338, 717 |
| Hin1I | GRCGYC | 2 cut(s) | 109, 1635 |
| Hin6I | GCGC | 2 cut(s) | 336, 715 |
| HinP1I | GCGC | 2 cut(s) | 336, 715 |
| HincII | GTYRAC | 3 cut(s) | 571, 1521, 1807 |
| HindII | GTYRAC | 3 cut(s) | 571, 1521, 1807 |
| HpaII | CCGG | 8 cut(s) | 519, 782, 828, 1218, 1280, 1638, 1842, 2658 |
| HphI | GGTGA | 8 cut(s) | 148, 707, 761, 1304, 2053, 2215, 2225, 2439 |
| Hpy99I | CGWCG | 3 cut(s) | 114, 326, 1196 |
| HpyAV | CCTTC | 5 cut(s) | 179, 624, 1043, 1898, 2546 |
| HpyCH4III | ACNGT | 5 cut(s) | 196, 361, 486, 1354, 2259 |
| HpyCH4IV | ACGT | 8 cut(s) | 42, 109, 379, 533, 1586, 1972, 2423, 2574 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 167, 325, 681, 950, 1491, 2489, 2632 |
| HpySE526I | ACGT | 8 cut(s) | 42, 109, 379, 533, 1586, 1972, 2423, 2574 |
| Hsp92I | GRCGYC | 2 cut(s) | 109, 1635 |
| HspAI | GCGC | 2 cut(s) | 336, 715 |
| KroI | GCCGGC | 1 cut(s) | 1217 |
| KroNI | GCCGGC | 1 cut(s) | 1219 |
| Ksp22I | TGATCA | 1 cut(s) | 2082 |
| KspI | CCGCGG | 2 cut(s) | 307, 1917 |
| Kzo9I | GATC | 9 cut(s) | 96, 311, 763, 978, 1294, 1918, 2082, 2323, 2428 |
| LguI | GCTCTTC | 1 cut(s) | 963 |
| LmnI | GCTCC | 6 cut(s) | 452, 655, 1095, 1687, 2544, 2603 |
| Lsp1109I | GCAGC | 3 cut(s) | 965, 2252, 2500 |
| LweI | GCATC | 8 cut(s) | 417, 1060, 1135, 1570, 1738, 1759, 2014, 2492 |
| MaeI | CTAG | 5 cut(s) | 1244, 1274, 1464, 2411, 2549 |
| MaeII | ACGT | 8 cut(s) | 42, 109, 379, 533, 1586, 1972, 2423, 2574 |
| MalI | GATC | 9 cut(s) | 98, 313, 765, 980, 1296, 1920, 2084, 2325, 2430 |
| MboI | GATC | 9 cut(s) | 96, 311, 763, 978, 1294, 1918, 2082, 2323, 2428 |
| MflI | RGATCY | 3 cut(s) | 1918, 2323, 2428 |
| MhlI | GDGCHC | 3 cut(s) | 660, 926, 1792 |
| MluCI | AATT | 5 cut(s) | 512, 698, 786, 1320, 2028 |
| MlyI | GAGTC | 9 cut(s) | 23, 34, 61, 554, 992, 1006, 1609, 1666, 2366 |
| MmeI | TCCRAC | 4 cut(s) | 621, 1371, 2351, 2406 |
| Mph1103I | ATGCAT | 2 cut(s) | 1731, 1855 |
| MroNI | GCCGGC | 1 cut(s) | 1217 |
| MroXI | GAANNNNTTC | 4 cut(s) | 207, 252, 1011, 1053 |
| MspA1I | CMGCKG | 5 cut(s) | 104, 306, 352, 1916, 2243 |
| MspCI | CTTAAG | 1 cut(s) | 2378 |
| MspI | CCGG | 8 cut(s) | 519, 782, 828, 1218, 1280, 1638, 1842, 2658 |
| MspR9I | CCNGG | 6 cut(s) | 519, 1280, 1572, 1842, 1843, 1901 |
| Mva1269I | GAATGC | 3 cut(s) | 1053, 1236, 2316 |
| MvaI | CCWGG | 2 cut(s) | 1572, 1901 |
| MvnI | CGCG | 3 cut(s) | 306, 684, 1916 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 167, 325, 681, 950, 1491, 2489, 2632 |
| NaeI | GCCGGC | 1 cut(s) | 1219 |
| NciI | CCSGG | 4 cut(s) | 519, 1280, 1842, 1843 |
| NcoI | CCATGG | 1 cut(s) | 1770 |
| NdeI | CATATG | 1 cut(s) | 1417 |
| NdeII | GATC | 9 cut(s) | 96, 311, 763, 978, 1294, 1918, 2082, 2323, 2428 |
| NgoMIV | GCCGGC | 1 cut(s) | 1217 |
| NlaIV | GGNNCC | 3 cut(s) | 454, 558, 1689 |
| NmuCI | GTSAC | 6 cut(s) | 154, 749, 2041, 2221, 2231, 2419 |
| NsiI | ATGCAT | 2 cut(s) | 1731, 1855 |
| NspI | RCATGY | 1 cut(s) | 543 |
| PaeR7I | CTCGAG | 1 cut(s) | 659 |
| PagI | TCATGA | 2 cut(s) | 1399, 1630 |
| PceI | AGGCCT | 2 cut(s) | 795, 1504 |
| PciI | ACATGT | 1 cut(s) | 539 |
| PciSI | GCTCTTC | 1 cut(s) | 963 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2324 |
| PctI | GAATGC | 3 cut(s) | 1053, 1236, 2316 |
| PdiI | GCCGGC | 1 cut(s) | 1219 |
| PdmI | GAANNNNTTC | 4 cut(s) | 207, 252, 1011, 1053 |
| PfeI | GAWTC | 5 cut(s) | 463, 1098, 1603, 1818, 2526 |
| PinAI | ACCGGT | 1 cut(s) | 827 |
| PkrI | GCNGC | 5 cut(s) | 308, 955, 1705, 2242, 2515 |
| PleI | GAGTC | 9 cut(s) | 22, 33, 60, 553, 991, 1005, 1609, 1666, 2365 |
| PpsI | GAGTC | 9 cut(s) | 22, 33, 60, 553, 991, 1005, 1609, 1666, 2365 |
| PscI | ACATGT | 1 cut(s) | 539 |
| Psp124BI | GAGCTC | 1 cut(s) | 660 |
| Psp1406I | AACGTT | 1 cut(s) | 533 |
| Psp6I | CCWGG | 2 cut(s) | 1570, 1899 |
| PspEI | GGTNACC | 4 cut(s) | 154, 749, 2221, 2231 |
| PspGI | CCWGG | 2 cut(s) | 1570, 1899 |
| PspN4I | GGNNCC | 3 cut(s) | 454, 558, 1689 |
| PspPI | GGNCC | 6 cut(s) | 241, 387, 443, 556, 1839, 2490 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1953, 1985 |
| PsuI | RGATCY | 3 cut(s) | 1918, 2323, 2428 |
| PvuII | CAGCTG | 1 cut(s) | 2243 |
| RsaI | GTAC | 8 cut(s) | 410, 737, 891, 948, 1684, 1971, 2261, 2462 |
| RsaNI | GTAC | 8 cut(s) | 409, 736, 890, 947, 1683, 1970, 2260, 2461 |
| SacI | GAGCTC | 1 cut(s) | 660 |
| SacII | CCGCGG | 2 cut(s) | 307, 1917 |
| SapI | GCTCTTC | 1 cut(s) | 963 |
| SatI | GCNGC | 5 cut(s) | 307, 954, 1704, 2241, 2514 |
| Sau3AI | GATC | 9 cut(s) | 96, 311, 763, 978, 1294, 1918, 2082, 2323, 2428 |
| Sau96I | GGNCC | 6 cut(s) | 241, 387, 443, 556, 1839, 2490 |
| SchI | GAGTC | 9 cut(s) | 23, 34, 61, 554, 992, 1006, 1609, 1666, 2366 |
| ScrFI | CCNGG | 6 cut(s) | 519, 1280, 1572, 1842, 1843, 1901 |
| SduI | GDGCHC | 3 cut(s) | 660, 926, 1792 |
| SfaNI | GCATC | 8 cut(s) | 417, 1060, 1135, 1570, 1738, 1759, 2014, 2492 |
| SfcI | CTRYAG | 1 cut(s) | 912 |
| Sfr274I | CTCGAG | 1 cut(s) | 659 |
| Sfr303I | CCGCGG | 2 cut(s) | 307, 1917 |
| SgrBI | CCGCGG | 2 cut(s) | 307, 1917 |
| SinI | GGWCC | 1 cut(s) | 443 |
| SlaI | CTCGAG | 1 cut(s) | 659 |
| SmaI | CCCGGG | 1 cut(s) | 1843 |
| SmlI | CTYRAG | 4 cut(s) | 494, 659, 1122, 2378 |
| SmoI | CTYRAG | 4 cut(s) | 494, 659, 1122, 2378 |
| Sse9I | AATT | 5 cut(s) | 512, 698, 786, 1320, 2028 |
| SseBI | AGGCCT | 2 cut(s) | 795, 1504 |
| SspI | AATATT | 3 cut(s) | 175, 217, 2016 |
| SspMI | CTAG | 5 cut(s) | 1244, 1274, 1464, 2411, 2549 |
| SstI | GAGCTC | 1 cut(s) | 660 |
| StuI | AGGCCT | 2 cut(s) | 795, 1504 |
| StyD4I | CCNGG | 6 cut(s) | 517, 1278, 1570, 1840, 1841, 1899 |
| StyI | CCWWGG | 6 cut(s) | 812, 918, 1065, 1770, 2104, 2159 |
| TaaI | ACNGT | 5 cut(s) | 196, 361, 486, 1354, 2259 |
| TaiI | ACGT | 8 cut(s) | 45, 112, 382, 536, 1589, 1975, 2426, 2577 |
| TasI | AATT | 5 cut(s) | 512, 698, 786, 1320, 2028 |
| TatI | WGTACW | 2 cut(s) | 735, 2460 |
| TauI | GCSGC | 2 cut(s) | 309, 1706 |
| TfiI | GAWTC | 5 cut(s) | 463, 1098, 1603, 1818, 2526 |
| TscAI | CASTG | 2 cut(s) | 201, 453 |
| TseFI | GTSAC | 6 cut(s) | 154, 749, 2041, 2221, 2231, 2419 |
| TseI | GCWGC | 3 cut(s) | 953, 2240, 2513 |
| Tsp45I | GTSAC | 6 cut(s) | 154, 749, 2041, 2221, 2231, 2419 |
| TspDTI | ATGAA | 4 cut(s) | 918, 1167, 2088, 2349 |
| TspGWI | ACGGA | 6 cut(s) | 556, 1700, 1824, 2154, 2277, 2333 |
| TspMI | CCCGGG | 1 cut(s) | 1841 |
| TspRI | CASTG | 2 cut(s) | 201, 453 |
| Vha464I | CTTAAG | 1 cut(s) | 2378 |
| VneI | GTGCAC | 1 cut(s) | 1788 |
| VpaK11BI | GGWCC | 1 cut(s) | 443 |
| XapI | RAATTY | 1 cut(s) | 698 |
| XbaI | TCTAGA | 2 cut(s) | 1463, 2548 |
| XceI | RCATGY | 1 cut(s) | 543 |
| XhoI | CTCGAG | 1 cut(s) | 659 |
| XmaI | CCCGGG | 1 cut(s) | 1841 |
| XmnI | GAANNNNTTC | 4 cut(s) | 207, 252, 1011, 1053 |
| XspI | CTAG | 5 cut(s) | 1244, 1274, 1464, 2411, 2549 |
| ZraI | GACGTC | 1 cut(s) | 110 |
| Zsp2I | ATGCAT | 2 cut(s) | 1731, 1855 |