Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Lipoxygenase | PF00305 | 2 - 659 | 0.0 | Lipoxygenase |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1847 |
| AatII | GACGTC | 1 cut(s) | 169 |
| Acc36I | ACCTGC | 1 cut(s) | 753 |
| AccB1I | GGYRCC | 1 cut(s) | 929 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 875, 1415 |
| AccI | GTMKAC | 1 cut(s) | 1106 |
| AciI | CCGC | 2 cut(s) | 1009, 1155 |
| AclWI | GGATC | 4 cut(s) | 991, 1283, 1296, 1658 |
| AcoI | YGGCCR | 2 cut(s) | 596, 866 |
| AcsI | RAATTY | 3 cut(s) | 13, 512, 536 |
| AcuI | CTGAAG | 3 cut(s) | 216, 1331, 1427 |
| AcyI | GRCGYC | 1 cut(s) | 166 |
| AfaI | GTAC | 2 cut(s) | 1190, 1601 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 122, 147, 875, 916, 933, 939, 1080, 1415 |
| AgeI | ACCGGT | 1 cut(s) | 926 |
| AgsI | TTSAA | 6 cut(s) | 782, 857, 1325, 1516, 1742, 1870 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1569 |
| AjnI | CCWGG | 3 cut(s) | 120, 932, 1180 |
| AleI | CACNNNNGTG | 1 cut(s) | 212 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 151, 183 |
| Alw21I | GWGCWC | 2 cut(s) | 970, 1203 |
| Alw26I | GTCTC | 1 cut(s) | 479 |
| AlwI | GGATC | 4 cut(s) | 991, 1283, 1296, 1658 |
| Ama87I | CYCGRG | 1 cut(s) | 1131 |
| AoxI | GGCC | 8 cut(s) | 113, 596, 631, 702, 842, 866, 1474, 1505 |
| ApeKI | GCWGC | 7 cut(s) | 7, 153, 289, 1006, 1043, 1211, 1580 |
| ApoI | RAATTY | 3 cut(s) | 13, 512, 536 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1319, 1351 |
| AseI | ATTAAT | 1 cut(s) | 1902 |
| AsiGI | ACCGGT | 1 cut(s) | 926 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1976 |
| AspA2I | CCTAGG | 1 cut(s) | 146 |
| AspLEI | GCGC | 2 cut(s) | 153, 1233 |
| AspS9I | GGNCC | 3 cut(s) | 184, 632, 786 |
| AsuHPI | GGTGA | 6 cut(s) | 890, 1170, 1393, 1573, 1779, 1820 |
| AsuII | TTCGAA | 1 cut(s) | 354 |
| AvaI | CYCGRG | 1 cut(s) | 1131 |
| AvaII | GGWCC | 2 cut(s) | 184, 786 |
| AvrII | CCTAGG | 1 cut(s) | 146 |
| BalI | TGGCCA | 1 cut(s) | 598 |
| BamHI | GGATCC | 1 cut(s) | 1288 |
| BanI | GGYRCC | 1 cut(s) | 929 |
| BanII | GRGCYC | 1 cut(s) | 1203 |
| BbsI | GAAGAC | 3 cut(s) | 895, 1332, 1488 |
| Bbv12I | GWGCWC | 2 cut(s) | 970, 1203 |
| BbvCI | CCTCAGC | 1 cut(s) | 306 |
| BbvI | GCAGC | 6 cut(s) | 140, 276, 993, 1055, 1198, 1592 |
| BccI | CCATC | 5 cut(s) | 452, 1340, 1675, 1750, 1831 |
| BceAI | ACGGC | 2 cut(s) | 646, 1483 |
| BciT130I | CCWGG | 3 cut(s) | 122, 934, 1182 |
| BciVI | GTATCC | 1 cut(s) | 1607 |
| BclI | TGATCA | 1 cut(s) | 1432 |
| BcoDI | GTCTC | 1 cut(s) | 479 |
| BfaI | CTAG | 7 cut(s) | 111, 147, 440, 554, 584, 1641, 1889 |
| BfmI | CTRYAG | 2 cut(s) | 154, 1293 |
| BfoI | RGCGCY | 2 cut(s) | 154, 1234 |
| BfuAI | ACCTGC | 1 cut(s) | 753 |
| BfuI | GTATCC | 1 cut(s) | 1607 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1504 |
| BglII | AGATCT | 1 cut(s) | 1528 |
| BisI | GCNGC | 7 cut(s) | 8, 154, 290, 1007, 1044, 1212, 1581 |
| BlnI | CCTAGG | 1 cut(s) | 146 |
| BlsI | GCNGC | 7 cut(s) | 9, 155, 291, 1008, 1045, 1213, 1582 |
| BmcAI | AGTACT | 1 cut(s) | 1190 |
| Bme1390I | CCNGG | 3 cut(s) | 122, 934, 1182 |
| Bme18I | GGWCC | 2 cut(s) | 184, 786 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1569 |
| BmeT110I | CYCGRG | 1 cut(s) | 1131 |
| BmgT120I | GGNCC | 3 cut(s) | 184, 632, 786 |
| BmiI | GGNNCC | 6 cut(s) | 186, 634, 787, 931, 1290, 1821 |
| BmrFI | CCNGG | 3 cut(s) | 122, 934, 1182 |
| BmsI | GCATC | 4 cut(s) | 910, 1078, 1354, 1843 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1416 |
| BpiI | GAAGAC | 3 cut(s) | 895, 1332, 1488 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 818, 850, 1125, 1157 |
| Bpu10I | CCTNAGC | 2 cut(s) | 306, 396 |
| Bpu14I | TTCGAA | 1 cut(s) | 354 |
| BpuEI | CTTGAG | 1 cut(s) | 332 |
| BsaHI | GRCGYC | 1 cut(s) | 166 |
| BsaI | GGTCTC | 1 cut(s) | 479 |
| BsaJI | CCNNGG | 7 cut(s) | 121, 146, 434, 705, 1194, 1499, 1671 |
| BsaWI | WCCGGW | 1 cut(s) | 926 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1935, 1965 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 122, 147, 875, 916, 933, 939, 1080, 1415 |
| Bse118I | RCCGGY | 1 cut(s) | 926 |
| Bse1I | ACTGG | 6 cut(s) | 111, 116, 210, 666, 1007, 1375 |
| Bse3DI | GCAATG | 3 cut(s) | 384, 389, 501 |
| BseBI | CCWGG | 3 cut(s) | 122, 934, 1182 |
| BseDI | CCNNGG | 7 cut(s) | 121, 146, 434, 705, 1194, 1499, 1671 |
| BseGI | GGATG | 5 cut(s) | 925, 1069, 1369, 1667, 1858 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 122, 147, 875, 916, 933, 939, 1080, 1415 |
| BseMI | GCAATG | 3 cut(s) | 384, 389, 501 |
| BseMII | CTCAG | 6 cut(s) | 279, 320, 612, 816, 830, 1216 |
| BseNI | ACTGG | 6 cut(s) | 111, 116, 210, 666, 1007, 1375 |
| BseRI | GAGGAG | 3 cut(s) | 260, 1688, 1811 |
| BseXI | GCAGC | 6 cut(s) | 140, 276, 993, 1055, 1198, 1592 |
| BseYI | CCCAGC | 1 cut(s) | 915 |
| BsgI | GTGCAG | 1 cut(s) | 275 |
| BshFI | GGCC | 8 cut(s) | 115, 598, 633, 704, 844, 868, 1476, 1507 |
| BshNI | GGYRCC | 1 cut(s) | 929 |
| BshTI | ACCGGT | 1 cut(s) | 926 |
| BsiHKAI | GWGCWC | 2 cut(s) | 970, 1203 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1131 |
| BsiSI | CCGG | 1 cut(s) | 927 |
| BslFI | GGGAC | 4 cut(s) | 347, 799, 893, 1994 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 122, 147, 875, 916, 933, 939, 1080, 1415 |
| BsmAI | GTCTC | 1 cut(s) | 479 |
| BsmFI | GGGAC | 4 cut(s) | 347, 799, 893, 1994 |
| BsmI | GAATGC | 1 cut(s) | 1856 |
| BsnI | GGCC | 8 cut(s) | 115, 598, 633, 704, 844, 868, 1476, 1507 |
| Bso31I | GGTCTC | 1 cut(s) | 479 |
| BsoBI | CYCGRG | 1 cut(s) | 1131 |
| Bsp119I | TTCGAA | 1 cut(s) | 354 |
| Bsp1286I | GDGCHC | 2 cut(s) | 970, 1203 |
| Bsp19I | CCATGG | 1 cut(s) | 1194 |
| BspACI | CCGC | 2 cut(s) | 1009, 1155 |
| BspANI | GGCC | 8 cut(s) | 115, 598, 633, 704, 844, 868, 1476, 1507 |
| BspCNI | CTCAG | 6 cut(s) | 278, 319, 613, 817, 831, 1215 |
| BspHI | TCATGA | 3 cut(s) | 687, 739, 970 |
| BspLI | GGNNCC | 6 cut(s) | 186, 634, 787, 931, 1290, 1821 |
| BspMAI | CTGCAG | 1 cut(s) | 158 |
| BspMI | ACCTGC | 1 cut(s) | 753 |
| BspPI | GGATC | 4 cut(s) | 991, 1283, 1296, 1658 |
| BspT104I | TTCGAA | 1 cut(s) | 354 |
| BspT107I | GGYRCC | 1 cut(s) | 929 |
| BspTNI | GGTCTC | 1 cut(s) | 479 |
| BsrDI | GCAATG | 3 cut(s) | 384, 389, 501 |
| BsrFI | RCCGGY | 1 cut(s) | 926 |
| BsrI | ACTGG | 6 cut(s) | 111, 116, 210, 666, 1007, 1375 |
| BssAI | RCCGGY | 1 cut(s) | 926 |
| BssECI | CCNNGG | 7 cut(s) | 121, 146, 434, 705, 1194, 1499, 1671 |
| BssNAI | GTATAC | 1 cut(s) | 1107 |
| BssNI | GRCGYC | 1 cut(s) | 166 |
| BssT1I | CCWWGG | 4 cut(s) | 146, 434, 705, 1194 |
| Bst1107I | GTATAC | 1 cut(s) | 1107 |
| Bst2UI | CCWGG | 3 cut(s) | 122, 934, 1182 |
| Bst4CI | ACNGT | 5 cut(s) | 506, 694, 811, 1753, 1877 |
| Bst6I | CTCTTC | 1 cut(s) | 356 |
| BstACI | GRCGYC | 1 cut(s) | 166 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 16, 298 |
| BstBI | TTCGAA | 1 cut(s) | 354 |
| BstC8I | GCNNGC | 4 cut(s) | 294, 948, 1153, 1254 |
| BstDEI | CTNAG | 7 cut(s) | 265, 306, 396, 621, 825, 839, 1202 |
| BstDSI | CCRYGG | 2 cut(s) | 1194, 1499 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 145 |
| BstF5I | GGATG | 5 cut(s) | 925, 1069, 1369, 1667, 1858 |
| BstH2I | RGCGCY | 2 cut(s) | 154, 1234 |
| BstHHI | GCGC | 2 cut(s) | 153, 1233 |
| BstMAI | GTCTC | 1 cut(s) | 479 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 16, 298, 307, 929, 943, 1253, 1504 |
| BstNI | CCWGG | 3 cut(s) | 122, 934, 1182 |
| BstNSI | RCATGY | 1 cut(s) | 1654 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1416 |
| BstSCI | CCNGG | 3 cut(s) | 120, 932, 1180 |
| BstSFI | CTRYAG | 2 cut(s) | 154, 1293 |
| BstV1I | GCAGC | 6 cut(s) | 140, 276, 993, 1055, 1198, 1592 |
| BstV2I | GAAGAC | 3 cut(s) | 895, 1332, 1488 |
| BstX2I | RGATCY | 3 cut(s) | 1288, 1528, 1663 |
| BstYI | RGATCY | 3 cut(s) | 1288, 1528, 1663 |
| BstZ17I | GTATAC | 1 cut(s) | 1107 |
| BsuI | GTATCC | 1 cut(s) | 1607 |
| BsuRI | GGCC | 8 cut(s) | 115, 598, 633, 704, 844, 868, 1476, 1507 |
| BtgI | CCRYGG | 2 cut(s) | 1194, 1499 |
| BtsCI | GGATG | 5 cut(s) | 925, 1069, 1369, 1667, 1858 |
| BtsI | GCAGTG | 1 cut(s) | 1590 |
| BveI | ACCTGC | 1 cut(s) | 753 |
| Cac8I | GCNNGC | 4 cut(s) | 294, 948, 1153, 1254 |
| CciI | TCATGA | 3 cut(s) | 687, 739, 970 |
| CfoI | GCGC | 2 cut(s) | 153, 1233 |
| Cfr10I | RCCGGY | 1 cut(s) | 926 |
| Cfr13I | GGNCC | 3 cut(s) | 184, 632, 786 |
| Csp6I | GTAC | 2 cut(s) | 1189, 1600 |
| CspAI | ACCGGT | 1 cut(s) | 926 |
| CviQI | GTAC | 2 cut(s) | 1189, 1600 |
| DdeI | CTNAG | 7 cut(s) | 265, 306, 396, 621, 825, 839, 1202 |
| DraI | TTTAAA | 1 cut(s) | 1881 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1569 |
| EaeI | YGGCCR | 2 cut(s) | 596, 866 |
| Eam1104I | CTCTTC | 1 cut(s) | 356 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1569 |
| EarI | CTCTTC | 1 cut(s) | 356 |
| EciI | GGCGGA | 1 cut(s) | 1170 |
| Ecl136II | GAGCTC | 1 cut(s) | 1201 |
| Eco130I | CCWWGG | 4 cut(s) | 146, 434, 705, 1194 |
| Eco147I | AGGCCT | 2 cut(s) | 704, 844 |
| Eco24I | GRGCYC | 1 cut(s) | 1203 |
| Eco31I | GGTCTC | 1 cut(s) | 479 |
| Eco32I | GATATC | 1 cut(s) | 318 |
| Eco47I | GGWCC | 2 cut(s) | 184, 786 |
| Eco53kI | GAGCTC | 1 cut(s) | 1201 |
| Eco57I | CTGAAG | 3 cut(s) | 216, 1331, 1427 |
| Eco88I | CYCGRG | 1 cut(s) | 1131 |
| EcoICRI | GAGCTC | 1 cut(s) | 1201 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 145 |
| EcoO109I | RGGNCCY | 1 cut(s) | 184 |
| EcoRII | CCWGG | 3 cut(s) | 120, 932, 1180 |
| EcoRV | GATATC | 1 cut(s) | 318 |
| EcoT14I | CCWWGG | 4 cut(s) | 146, 434, 705, 1194 |
| EcoT22I | ATGCAT | 2 cut(s) | 1071, 1858 |
| EcoT38I | GRGCYC | 1 cut(s) | 1203 |
| ErhI | CCWWGG | 4 cut(s) | 146, 434, 705, 1194 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 887, 919 |
| FaqI | GGGAC | 4 cut(s) | 347, 799, 893, 1994 |
| FauNDI | CATATG | 1 cut(s) | 1960 |
| FbaI | TGATCA | 1 cut(s) | 1432 |
| FblI | GTMKAC | 1 cut(s) | 1106 |
| Fnu4HI | GCNGC | 7 cut(s) | 8, 154, 290, 1007, 1044, 1212, 1581 |
| FokI | GGATG | 5 cut(s) | 932, 1056, 1376, 1654, 1865 |
| FriOI | GRGCYC | 1 cut(s) | 1203 |
| Fsp4HI | GCNGC | 7 cut(s) | 8, 154, 290, 1007, 1044, 1212, 1581 |
| FspBI | CTAG | 7 cut(s) | 111, 147, 440, 554, 584, 1641, 1889 |
| GlaI | GCGC | 2 cut(s) | 152, 1232 |
| GluI | GCNGC | 7 cut(s) | 8, 154, 290, 1007, 1044, 1212, 1581 |
| GsaI | CCCAGC | 1 cut(s) | 919 |
| HaeII | RGCGCY | 2 cut(s) | 154, 1234 |
| HaeIII | GGCC | 8 cut(s) | 115, 598, 633, 704, 844, 868, 1476, 1507 |
| HapII | CCGG | 1 cut(s) | 927 |
| HhaI | GCGC | 2 cut(s) | 153, 1233 |
| Hin1I | GRCGYC | 1 cut(s) | 166 |
| Hin6I | GCGC | 2 cut(s) | 151, 1231 |
| HinP1I | GCGC | 2 cut(s) | 151, 1231 |
| HindIII | AAGCTT | 1 cut(s) | 1245 |
| HinfI | GANTC | 8 cut(s) | 365, 625, 641, 974, 1012, 1158, 1738, 2007 |
| HpaII | CCGG | 1 cut(s) | 927 |
| HphI | GGTGA | 6 cut(s) | 890, 1170, 1393, 1573, 1779, 1820 |
| Hpy166II | GTNNAC | 6 cut(s) | 170, 611, 1107, 1455, 1588, 1602 |
| Hpy188III | TCNNGA | 8 cut(s) | 95, 267, 332, 688, 740, 971, 1133, 1436 |
| Hpy8I | GTNNAC | 6 cut(s) | 170, 611, 1107, 1455, 1588, 1602 |
| HpyAV | CCTTC | 4 cut(s) | 374, 439, 776, 1263 |
| HpyCH4III | ACNGT | 5 cut(s) | 506, 694, 811, 1753, 1877 |
| HpyCH4IV | ACGT | 2 cut(s) | 166, 1413 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 16, 298, 307, 929, 943, 1253, 1504 |
| HpyF3I | CTNAG | 7 cut(s) | 265, 306, 396, 621, 825, 839, 1202 |
| HpySE526I | ACGT | 2 cut(s) | 166, 1413 |
| Hsp92I | GRCGYC | 1 cut(s) | 166 |
| HspAI | GCGC | 2 cut(s) | 151, 1231 |
| Ksp22I | TGATCA | 1 cut(s) | 1432 |
| LmnI | GCTCC | 6 cut(s) | 4, 306, 1198, 1438, 1819, 1943 |
| Lsp1109I | GCAGC | 6 cut(s) | 140, 276, 993, 1055, 1198, 1592 |
| LweI | GCATC | 4 cut(s) | 910, 1078, 1354, 1843 |
| MaeI | CTAG | 7 cut(s) | 111, 147, 440, 554, 584, 1641, 1889 |
| MaeII | ACGT | 2 cut(s) | 166, 1413 |
| MaeIII | GTNAC | 4 cut(s) | 878, 1021, 1561, 1993 |
| MboII | GAAGA | 9 cut(s) | 209, 343, 368, 545, 895, 1337, 1493, 1538, 1673 |
| MfeI | CAATTG | 2 cut(s) | 873, 1320 |
| MflI | RGATCY | 3 cut(s) | 1288, 1528, 1663 |
| MhlI | GDGCHC | 2 cut(s) | 970, 1203 |
| MlsI | TGGCCA | 1 cut(s) | 598 |
| MluCI | AATT | 9 cut(s) | 13, 512, 536, 777, 873, 1038, 1320, 1554, 1896 |
| MluNI | TGGCCA | 1 cut(s) | 598 |
| MlyI | GAGTC | 4 cut(s) | 968, 1006, 1167, 2016 |
| MmeI | TCCRAC | 1 cut(s) | 1921 |
| Mox20I | TGGCCA | 1 cut(s) | 598 |
| Mph1103I | ATGCAT | 2 cut(s) | 1071, 1858 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1976 |
| MscI | TGGCCA | 1 cut(s) | 598 |
| MseI | TTAA | 8 cut(s) | 375, 564, 588, 1146, 1371, 1425, 1880, 1902 |
| MslI | CAYNNNNRTG | 4 cut(s) | 212, 963, 1861, 2000 |
| Msp20I | TGGCCA | 1 cut(s) | 598 |
| MspI | CCGG | 1 cut(s) | 927 |
| MspR9I | CCNGG | 3 cut(s) | 122, 934, 1182 |
| MunI | CAATTG | 2 cut(s) | 873, 1320 |
| Mva1269I | GAATGC | 1 cut(s) | 1856 |
| MvaI | CCWGG | 3 cut(s) | 122, 934, 1182 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 16, 298, 307, 929, 943, 1253, 1504 |
| NcoI | CCATGG | 1 cut(s) | 1194 |
| NdeI | CATATG | 1 cut(s) | 1960 |
| NlaIV | GGNNCC | 6 cut(s) | 186, 634, 787, 931, 1290, 1821 |
| NmeAIII | GCCGAG | 2 cut(s) | 523, 844 |
| NmuCI | GTSAC | 4 cut(s) | 878, 1021, 1561, 1993 |
| NsiI | ATGCAT | 2 cut(s) | 1071, 1858 |
| NspI | RCATGY | 1 cut(s) | 1654 |
| NspV | TTCGAA | 1 cut(s) | 354 |
| OliI | CACNNNNGTG | 1 cut(s) | 212 |
| PaeR7I | CTCGAG | 1 cut(s) | 1131 |
| PagI | TCATGA | 3 cut(s) | 687, 739, 970 |
| PceI | AGGCCT | 2 cut(s) | 704, 844 |
| PctI | GAATGC | 1 cut(s) | 1856 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1976 |
| PfeI | GAWTC | 4 cut(s) | 365, 625, 641, 1738 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 875, 1415 |
| PinAI | ACCGGT | 1 cut(s) | 926 |
| PkrI | GCNGC | 7 cut(s) | 9, 155, 291, 1008, 1045, 1213, 1582 |
| PleI | GAGTC | 4 cut(s) | 968, 1006, 1166, 2015 |
| PpsI | GAGTC | 4 cut(s) | 968, 1006, 1166, 2015 |
| PpuMI | RGGWCCY | 1 cut(s) | 184 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1416 |
| PshBI | ATTAAT | 1 cut(s) | 1902 |
| PsiI | TTATAA | 1 cut(s) | 1847 |
| Psp124BI | GAGCTC | 1 cut(s) | 1203 |
| Psp5II | RGGWCCY | 1 cut(s) | 184 |
| Psp6I | CCWGG | 3 cut(s) | 120, 932, 1180 |
| PspFI | CCCAGC | 1 cut(s) | 915 |
| PspGI | CCWGG | 3 cut(s) | 120, 932, 1180 |
| PspN4I | GGNNCC | 6 cut(s) | 186, 634, 787, 931, 1290, 1821 |
| PspPI | GGNCC | 3 cut(s) | 184, 632, 786 |
| PspPPI | RGGWCCY | 1 cut(s) | 184 |
| PstI | CTGCAG | 1 cut(s) | 158 |
| PsuI | RGATCY | 3 cut(s) | 1288, 1528, 1663 |
| RsaI | GTAC | 2 cut(s) | 1190, 1601 |
| RsaNI | GTAC | 2 cut(s) | 1189, 1600 |
| RseI | CAYNNNNRTG | 4 cut(s) | 212, 963, 1861, 2000 |
| SacI | GAGCTC | 1 cut(s) | 1203 |
| SaqAI | TTAA | 8 cut(s) | 375, 564, 588, 1146, 1371, 1425, 1880, 1902 |
| SatI | GCNGC | 7 cut(s) | 8, 154, 290, 1007, 1044, 1212, 1581 |
| Sau96I | GGNCC | 3 cut(s) | 184, 632, 786 |
| ScaI | AGTACT | 1 cut(s) | 1190 |
| SchI | GAGTC | 4 cut(s) | 968, 1006, 1167, 2016 |
| ScrFI | CCNGG | 3 cut(s) | 122, 934, 1182 |
| SduI | GDGCHC | 2 cut(s) | 970, 1203 |
| SfaNI | GCATC | 4 cut(s) | 910, 1078, 1354, 1843 |
| SfcI | CTRYAG | 2 cut(s) | 154, 1293 |
| Sfr274I | CTCGAG | 1 cut(s) | 1131 |
| SfuI | TTCGAA | 1 cut(s) | 354 |
| SgrAI | CRCCGGYG | 1 cut(s) | 926 |
| SinI | GGWCC | 2 cut(s) | 184, 786 |
| SlaI | CTCGAG | 1 cut(s) | 1131 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 212, 963, 1861, 2000 |
| SmlI | CTYRAG | 2 cut(s) | 311, 1131 |
| SmoI | CTYRAG | 2 cut(s) | 311, 1131 |
| Sse9I | AATT | 9 cut(s) | 13, 512, 536, 777, 873, 1038, 1320, 1554, 1896 |
| SseBI | AGGCCT | 2 cut(s) | 704, 844 |
| SsiI | CCGC | 2 cut(s) | 1009, 1155 |
| SspMI | CTAG | 7 cut(s) | 111, 147, 440, 554, 584, 1641, 1889 |
| SstI | GAGCTC | 1 cut(s) | 1203 |
| StuI | AGGCCT | 2 cut(s) | 704, 844 |
| StyD4I | CCNGG | 3 cut(s) | 120, 932, 1180 |
| StyI | CCWWGG | 4 cut(s) | 146, 434, 705, 1194 |
| TaaI | ACNGT | 5 cut(s) | 506, 694, 811, 1753, 1877 |
| TaiI | ACGT | 2 cut(s) | 169, 1416 |
| TaqI | TCGA | 4 cut(s) | 354, 1132, 1778, 1860 |
| TasI | AATT | 9 cut(s) | 13, 512, 536, 777, 873, 1038, 1320, 1554, 1896 |
| TatI | WGTACW | 2 cut(s) | 1188, 1599 |
| TfiI | GAWTC | 4 cut(s) | 365, 625, 641, 1738 |
| Tru1I | TTAA | 8 cut(s) | 375, 564, 588, 1146, 1371, 1425, 1880, 1902 |
| Tru9I | TTAA | 8 cut(s) | 375, 564, 588, 1146, 1371, 1425, 1880, 1902 |
| TseFI | GTSAC | 4 cut(s) | 878, 1021, 1561, 1993 |
| TseI | GCWGC | 7 cut(s) | 7, 153, 289, 1006, 1043, 1211, 1580 |
| Tsp45I | GTSAC | 4 cut(s) | 878, 1021, 1561, 1993 |
| TspDTI | ATGAA | 7 cut(s) | 246, 357, 393, 546, 676, 1494, 1526 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 875, 1415 |
| VpaK11BI | GGWCC | 2 cut(s) | 184, 786 |
| VspI | ATTAAT | 1 cut(s) | 1902 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 145 |
| XapI | RAATTY | 3 cut(s) | 13, 512, 536 |
| XceI | RCATGY | 1 cut(s) | 1654 |
| XhoI | CTCGAG | 1 cut(s) | 1131 |
| XmaJI | CCTAGG | 1 cut(s) | 146 |
| XmiI | GTMKAC | 1 cut(s) | 1106 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1976 |
| XspI | CTAG | 7 cut(s) | 111, 147, 440, 554, 584, 1641, 1889 |
| ZraI | GACGTC | 1 cut(s) | 167 |
| ZrmI | AGTACT | 1 cut(s) | 1190 |
| Zsp2I | ATGCAT | 2 cut(s) | 1071, 1858 |