FvH4_3g43530

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
36270861 .. 36276508
5648 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g43530.t1

Sequence Viewer

Length: 2853 bp
ATGTTGAAACCCCATAAGTCACTGTCTCTCCTTCTTCAGAACAAGCCGTTCATCCATGGAAGTAAAGGCAGCAGAGCTTCACTTTCAGTCTGGTCAGCAAGTCATTCATTCCCCAACAAACACAAAAACCTTCGAGTTGTCTCCGTTAAAACTTACAGCAACAATATAGAAGCCGTGAGTAGTACTAATAGTACTAACAGCAGTAGCAGCACTAGTACTAGTTCTTCAGGTTCAACAACAACTACAACAATCACTACTACGACTGAGGTGACAGAAATAGTGACGGAGAACGAAGATGCAGTGGCGGACAGAGAAGTAGTGACCACAAAAGAAGTGGTGACGGAGAAGTTCATCAGTGTTAAAGCAACCATAACGGTGACTCTTACAGTTGGTGGGTTTCTGTCTCACATGGGTATTGCCAGAGGACTAGATGATATCAAAGACGTGCTTGGTCGAACGCTCTTCATGGAGCTTCTTAGCGCTCACCTTGATCCCAAAACTGGATTAGAGAAGGAGCCAGTTCCAGGGTTTGCACACCGGAGTCGCCGAGCGGAGGGTGAGATTATATACGAGACAGATTTTAAAGTTCCATTAGATTTTGGAGAAGTGGGAGCCGTTCTAATAGAAAATGAGCATCACAAGGAGATGTATCTCAAGGACATTGTCCTGGATGGCTTGCCTAATAGCCCTGTACTCCTTACCTGTAATTCATGGCTTCACTCCAAGTATGACAATCCAGCCAAGAGGGTCTTCTTCACTAACAAGTCATATTTGCCATTCCAAACTCCAAGTGCATTGGTGAGGCTAAGAGAGGAGGAGCTTGTGACATTGCGCGGCAATGGCCAAGGAGAGCGCAAGAAGTTTGAGAGAATATACGATTATGATGTTTACAATGATCTTGGGGATCCTGATACGAGTCTAAGGCTTATAAGACCGGTTCTCGGAGGAAACGAAGAATTCCCCTATCCCAGGCGATGTCGAACTGGGCGGCCGATGAGTGAAGTAGACAAATATTCGGAGAAGAGGAGCAGCAAGGAAGTGTACGTTCCTAGAGATGAAGCCTTCTCGGAGATAAAGCAGTTAACATTTTCAGCCAAGACAGTGTACGCTGTCATGCATGCAGTAGTACCCTCCTTGGGGAAAGCCATCGACACTGATCTTGGATTCAATTTGTTCACGTCAATAGACTCACTTTTCCATGATGGCATCAAGTTGTCTTCATCTAAAGAACAAAAAGGGCTTCTCCAAGCCATACTTCCCAGACTAGTGAATGCTTTGGCTTCTGGAGGTGATGTTTTGCGGTTCGTGCCCCCAGAAACAATGAATAGAGACAGATTCTTCTGGTTTAGGGACGAGGAATTTGCTAGGCAGACTCTTGCCGGTCTCAACCCGTATAGCATTAAGTTGGTGAAGGAATGGCCATTGAAGAGTGAATTGGATCCCGATGTGTATGGACCCCCAGAATCTGCAATCACCACGGAAATGATTGAGCAAGAAATTAAAGGTTTTTCGTCCGTCGAAGAGGCCATACGAGAAAAGAAGTTGTTCATACTAGATTACCATGATTTGTTTTTACCATATGTGAGCAAAGTAAGAGAGATTAAAGGCACGACACTATATGGATCGAGGACATTGTTCTTCCTAACTCCAGAAGGAACCCTAAGGCCTCTGGCTATTGAGTTGACTCGATCGCCAATGGATGGAAAGCCTCAGTGGAAGCAAGCCTTCCAACCCAGCTGGAATGCTACCGGTGTCTGGCTTTGGAGGATTGCCAAAGCTCATGTCCTTGCTCATGACTCTGGTTACCATCAACTTGTTAGTCACTGGTTAAGAACGCATTGCGTTACAGAACCATATATAATCGCAACCAGTCGTCAGCTGAGTGTGTTGCACCCAGTCTACAAGTTGTTGCACCCCCATTTCAGATACACTATGGAGATCAATGCGCTTGCTCGTGAATCACTAATCAATGCCGGTGGCATAATTGAAACCTCATTCTCACCTGGAAAATACTCCTTGGAGCTTTGCTCTATTGCCTATGCTAAGGAGTGGCGATTCGACCAACAGGCTCTTCCAGCTGACCTAATTTGCAGGGGAATGGCTGTTGAGGACCCAACCGCTCCTCACGGTCTGAGGTTGACAATTCAAGACTACCCTTTTGCCAATGATGGACTCCTCCTATGGGATGCCATTAAAGAATGGGTCTCAGACTATGTAAACCACTACTACACAGACTCCAGGCTTGTACAAACTGATCATGAGCTCCAAGCATGGTGGACAGAGATCAGAACTGTAGGTCACGGGGACAAGAAAGACGAACCCTGGTGGCCAGACCTAAATACCCCTCAAGACCTCATCGACATCCTCACAACAATGCTTTGGGTCACATCCGGTCACCATGCATCAGTTAACTTTGGTCAGTATACCTATGCAGGTTACTTCCCTAACCGCCCAACAATTGCAAGGACCAATGTGCCCACGGAGGACCCCGACGATGAGGCTTGGGAAATGTTCATGAAAAAACCCGAAGCTGCTCTTCTGCGGTGCTTTCCTTCGCAAATCCAAGCCACAACGATAATGGCGGTTTTAGACATTTTGTCTACTCATTCGCCGGACGAGGAGTACATTGGAGAGAAGATGGAGGACGCATGGGCCGAAGACGAAGTTATAAAGGCGGCGTTTGAGCGGTTTAAGGGGAGGTTGAAGATGCTTGAAGAAACTATTGATGAGAGAAATGCTAATTTTGAGTTGAAGAACAGAACTGGAGCTGGGGTTGTGCCTTATGAACTTTTGAAGCCCGTTTCAGAACCTGGGGTTACCGGGAAGGGCGTTCCATATAGCATCTCTATTTAA

Protein Analysis

951

Amino Acids

107.44

Weight (kDa)

5.8

Isoelectric Point (pI)

40.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 190 - 252 2.3e-08 PLAT/LH2 domain
Lipoxygenase PF00305 266 - 933 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000211)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45140 AT3G45140
fragaria_vesca FvH4_3g43530 FvH4_3g43540 FvH4_3g43540 FvH4_5g05680 FvH4_5g26250 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00420 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440
malus_domestica MD02G1317800.v1.1 MD03G1021200.v1.1 MD07G1003600.v1.1 MD07G1003700.v1.1 MD07G1003900.v1.1 MD07G1004500.v1.1 MD11G1023100.v1.1
prunus_persica Prupe.2G005300_v2.0.a1 Prupe.2G005300_v2.0.a1 Prupe.2G005500_v2.0.a1 Prupe.2G005800_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1
pyrus_communis pycom02g26570 pycom02g26590 pycom02g26600 pycom07g00350 pycom11g01870
rosa_chinensis RchiOBHm_Chr1g0314111 RchiOBHm_Chr1g0314131 RchiOBHm_Chr1g0314151 RchiOBHm_Chr5g0078061 RchiOBHm_Chr5g0078091 RchiOBHm_Chr6g0285041 RchiOBHm_Chr6g0285051 RchiOBHm_Chr7g0216951
rosa_laevigata RLG00000002519 RLG00000002520 RLG00000002523 RLG00000002524 RLG00000002526 RLG00000012683 RLG00000030702 RLG00000030773 RLG00000030774 RLG00000030775 RLG00000036743 RLG00000036744 RLG00000036746 RLG00000036748
rosa_multiflora Rmu_co8050096.1_g000001 Rmu_co8091784.1_g000001 Rmu_co8342063.1_g000001 Rmu_co8353481.1_g000001 Rmu_co8390647.1_g000001 Rmu_sc0000670.1_g000032 Rmu_sc0000854.1_g000025 Rmu_sc0002478.1_g000009 Rmu_sc0004992.1_g000003 Rmu_sc0006851.1_g000003 Rmu_sc0009311.1_g000001 Rmu_sc0009311.1_g000005 Rmu_ssc0000154.1_g000036 Rmu_ssc0000154.1_g000041
rosa_roxburghii Rroxscaffold_1G00000310 Rroxscaffold_1G00000320 Rroxscaffold_1G00000330 Rroxscaffold_1G00000340 Rroxscaffold_1G00004130 Rroxscaffold_1G00004190 Rroxscaffold_3G00242690 Rroxscaffold_3G00242700 Rroxscaffold_3G00242710 Rroxscaffold_3G00242720 Rroxscaffold_3G00242740 Rroxscaffold_4G00332030 Rroxscaffold_4G00332050 Rroxscaffold_4G00332060 Rroxscaffold_6G00427990 Rroxscaffold_7G00183800 Rroxscaffold_7G00184080
rosa_rugosa Rorug01G0000100 Rorug01G0000200 Rorug01G0130400 Rorug05G0458200 Rorug05G0458300 Rorug05G0458400 Rorug06G0170200 Rorug07G0164500 RorugPtG0006300 RorugPtG0006400 RorugPtG0006500
rosa_samantha Rh1AG008700 Rh1AG008800 Rh1BG002100 Rh1BG002200 Rh1BG002700 Rh1BG012600 Rh1BG012900 Rh1BG120700 Rh1DG004500 Rh1DG004600 Rh1DG004700 Rh1DG004800 Rh1DG013000 Rh5BG535400 Rh5CG558800 Rh5DG547500 Rh5DG547600 Rh6AG281900 Rh6BG282500 Rh6CG284200 Rh6CG284300 Rh6CG284400 Rh6DG277500 Rh6DG277600 Rh7AG304700 Rh7BG296300 Rh7CG323200 Rh7CG323300 Rh7CG323400 Rh7CG323500 Rh7CG323800 Rh7DG304900
rosa_wichuraiana Rw1G000380 Rw1G000390 Rw1G000400 Rw5G047570 Rw5G047580 Rw6G024220 Rw7G025870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 929, 2669
Acc36I ACCTGC 1 cut(s) 2423
AccB7I CCANNNNNTGG 1 cut(s) 1700
AccBSI CCGCTC 3 cut(s) 551, 2120, 2686
AccI GTMKAC 4 cut(s) 1005, 1899, 2423, 2600
AccII CGCG 1 cut(s) 834
AclWI GGATC 6 cut(s) 485, 899, 912, 1433, 1446, 1630
AcoI YGGCCR 4 cut(s) 841, 989, 1418, 2327
AcsI RAATTY 2 cut(s) 956, 1358
AcuI CTGAAG 2 cut(s) 20, 210
AfaI GTAC 9 cut(s) 184, 193, 217, 693, 1043, 1106, 1128, 2247, 2624
AfeI AGCGCT 1 cut(s) 481
AgeI ACCGGT 2 cut(s) 934, 1748
AhdI GACNNNNNGTC 1 cut(s) 2596
AhlI ACTAGT 3 cut(s) 212, 218, 1264
AjiI CACGTC 2 cut(s) 445, 1179
AjnI CCWGG 7 cut(s) 523, 666, 968, 2002, 2237, 2321, 2809
AjuI GAANNNNNNNTTGG 8 cut(s) 734, 766, 1239, 1271, 1418, 1450, 2055, 2087
Alw21I GWGCWC 1 cut(s) 2265
Alw26I GTCTC 7 cut(s) 30, 145, 408, 566, 1323, 1388, 2209
AlwI GGATC 6 cut(s) 485, 899, 912, 1433, 1446, 1630
AlwNI CAGNNNCTG 2 cut(s) 1466, 2810
Aor51HI AGCGCT 1 cut(s) 481
AoxI GGCC 7 cut(s) 841, 989, 1418, 1524, 1664, 2327, 2652
ApeKI GCWGC 4 cut(s) 69, 207, 1029, 2531
ApoI RAATTY 2 cut(s) 956, 1358
ArsI GACNNNNNNTTYG 6 cut(s) 1343, 1375, 1767, 1799, 2141, 2173
AsiGI ACCGGT 2 cut(s) 934, 1748
Asp700I GAANNNNTTC 1 cut(s) 1544
AspLEI GCGC 4 cut(s) 482, 834, 855, 1948
AspS9I GGNCC 5 cut(s) 1454, 2110, 2466, 2485, 2652
AsuC2I CCSGG 1 cut(s) 2821
AvaII GGWCC 4 cut(s) 1454, 2110, 2466, 2485
AxyI CCTNAGG 1 cut(s) 1661
BaeGI GKGCMC 2 cut(s) 1311, 2478
BalI TGGCCA 3 cut(s) 843, 1420, 2329
BamHI GGATCC 2 cut(s) 904, 1438
BanII GRGCYC 1 cut(s) 2265
BarI GAAGNNNNNNTAC 4 cut(s) 208, 240, 1512, 1544
BauI CACGAG 1 cut(s) 1953
BbsI GAAGAC 3 cut(s) 742, 1209, 2664
Bbv12I GWGCWC 1 cut(s) 2265
BbvI GCAGC 4 cut(s) 81, 219, 1041, 2518
BccI CCATC 7 cut(s) 665, 1154, 1196, 1694, 1815, 2162, 2632
BceAI ACGGC 3 cut(s) 31, 158, 599
BcgI CGANNNNNNTGC 2 cut(s) 1343, 1377
BciT130I CCWGG 7 cut(s) 525, 668, 970, 2004, 2239, 2323, 2811
BclI TGATCA 1 cut(s) 2254
BcnI CCSGG 1 cut(s) 2821
BcoDI GTCTC 7 cut(s) 30, 145, 408, 566, 1323, 1388, 2209
BcuI ACTAGT 3 cut(s) 212, 218, 1264
BfaI CTAG 7 cut(s) 213, 219, 428, 1050, 1265, 1365, 1553
BfmI CTRYAG 1 cut(s) 2292
BfoI RGCGCY 1 cut(s) 483
BfuAI ACCTGC 1 cut(s) 2423
BisI GCNGC 7 cut(s) 70, 208, 835, 989, 1030, 2532, 2676
BlsI GCNGC 7 cut(s) 71, 209, 836, 990, 1031, 2533, 2677
BmcAI AGTACT 3 cut(s) 184, 193, 217
Bme1390I CCNGG 8 cut(s) 525, 668, 970, 2004, 2239, 2323, 2811, 2821
Bme18I GGWCC 4 cut(s) 1454, 2110, 2466, 2485
BmeRI GACNNNNNGTC 1 cut(s) 2596
BmgBI CACGTC 2 cut(s) 445, 1179
BmgT120I GGNCC 5 cut(s) 1454, 2110, 2466, 2485, 2652
BmiI GGNNCC 8 cut(s) 516, 613, 906, 1440, 1456, 1657, 2112, 2487
BmrFI CCNGG 8 cut(s) 525, 668, 970, 2004, 2239, 2323, 2811, 2821
BmrI ACTGGG 2 cut(s) 993, 1889
BmsI GCATC 6 cut(s) 286, 643, 1215, 2176, 2411, 2697
BmuI ACTGGG 2 cut(s) 993, 1889
BpiI GAAGAC 3 cut(s) 742, 1209, 2664
BplI GAGNNNNNCTC 2 cut(s) 2012, 2044
BpmI CTGGAG 4 cut(s) 1305, 1632, 2221, 2784
Bpu10I CCTNAGC 1 cut(s) 2043
BpuEI CTTGAG 2 cut(s) 638, 2331
BpuMI CCSGG 1 cut(s) 2821
BsaI GGTCTC 2 cut(s) 1388, 2209
BsaWI WCCGGW 4 cut(s) 537, 934, 1748, 2390
BsaXI ACNNNNNCTCC 8 cut(s) 12, 42, 1278, 1308, 2219, 2249, 2757, 2787
Bse118I RCCGGY 4 cut(s) 934, 1379, 1748, 1973
Bse1I ACTGG 7 cut(s) 505, 518, 988, 1829, 1869, 1895, 2767
Bse21I CCTNAGG 1 cut(s) 1661
Bse3DI GCAATG 3 cut(s) 827, 844, 1837
BseBI CCWGG 7 cut(s) 525, 668, 970, 2004, 2239, 2323, 2811
BseGI GGATG 6 cut(s) 51, 676, 1705, 2191, 2361, 2387
BseMI GCAATG 3 cut(s) 827, 844, 1837
BseMII CTCAG 5 cut(s) 255, 1724, 1871, 2123, 2220
BseNI ACTGG 7 cut(s) 505, 518, 988, 1829, 1869, 1895, 2767
BseRI GAGGAG 6 cut(s) 827, 830, 1039, 2112, 2165, 2633
BseSI GKGCMC 2 cut(s) 1311, 2478
BseX3I CGGCCG 1 cut(s) 989
BseXI GCAGC 4 cut(s) 81, 219, 1041, 2518
BseYI CCCAGC 2 cut(s) 1733, 2768
Bsh1236I CGCG 1 cut(s) 834
Bsh1285I CGRYCG 2 cut(s) 992, 1691
BshFI GGCC 7 cut(s) 843, 991, 1420, 1526, 1666, 2329, 2654
BshTI ACCGGT 2 cut(s) 934, 1748
BsiEI CGRYCG 2 cut(s) 992, 1691
BsiHKAI GWGCWC 1 cut(s) 2265
BsiSI CCGG 8 cut(s) 538, 935, 1380, 1749, 1974, 2391, 2612, 2820
BslFI GGGAC 2 cut(s) 1364, 2318
BsmAI GTCTC 7 cut(s) 30, 145, 408, 566, 1323, 1388, 2209
BsmFI GGGAC 2 cut(s) 1364, 2318
BsmI GAATGC 2 cut(s) 1276, 1747
BsnI GGCC 7 cut(s) 843, 991, 1420, 1526, 1666, 2329, 2654
Bso31I GGTCTC 2 cut(s) 1388, 2209
Bsp1286I GDGCHC 3 cut(s) 1311, 2265, 2478
Bsp1407I TGTACA 1 cut(s) 2245
Bsp19I CCATGG 1 cut(s) 55
BspANI GGCC 7 cut(s) 843, 991, 1420, 1526, 1666, 2329, 2654
BspCNI CTCAG 5 cut(s) 256, 1723, 1872, 2124, 2219
BspFNI CGCG 1 cut(s) 834
BspHI TCATGA 3 cut(s) 1792, 2257, 2514
BspLI GGNNCC 8 cut(s) 516, 613, 906, 1440, 1456, 1657, 2112, 2487
BspMI ACCTGC 1 cut(s) 2423
BspPI GGATC 6 cut(s) 485, 899, 912, 1433, 1446, 1630
BspQI GCTCTTC 3 cut(s) 467, 2076, 2541
BspTNI GGTCTC 2 cut(s) 1388, 2209
BsrBI CCGCTC 3 cut(s) 551, 2120, 2686
BsrDI GCAATG 3 cut(s) 827, 844, 1837
BsrFI RCCGGY 4 cut(s) 934, 1379, 1748, 1973
BsrGI TGTACA 1 cut(s) 2245
BsrI ACTGG 7 cut(s) 505, 518, 988, 1829, 1869, 1895, 2767
BssAI RCCGGY 4 cut(s) 934, 1379, 1748, 1973
BssNAI GTATAC 1 cut(s) 2424
BssSI CACGAG 1 cut(s) 1953
BssT1I CCWWGG 4 cut(s) 55, 844, 1134, 2016
Bst1107I GTATAC 1 cut(s) 2424
Bst2BI CACGAG 1 cut(s) 1953
Bst2UI CCWGG 7 cut(s) 525, 668, 970, 2004, 2239, 2323, 2811
Bst4CI ACNGT 6 cut(s) 24, 376, 388, 1102, 2129, 2293
Bst6I CTCTTC 6 cut(s) 467, 1016, 1421, 1515, 2076, 2541
BstAUI TGTACA 1 cut(s) 2245
BstC8I GCNNGC 4 cut(s) 677, 1119, 1722, 1950
BstDSI CCRYGG 3 cut(s) 55, 1476, 2478
BstEII GGTNACC 3 cut(s) 1802, 2393, 2815
BstENI CCTNNNNNAGG 1 cut(s) 967
BstF5I GGATG 6 cut(s) 51, 676, 1705, 2191, 2361, 2387
BstFNI CGCG 1 cut(s) 834
BstH2I RGCGCY 1 cut(s) 483
BstHHI GCGC 4 cut(s) 482, 834, 855, 1948
BstMAI GTCTC 7 cut(s) 30, 145, 408, 566, 1323, 1388, 2209
BstMCI CGRYCG 2 cut(s) 992, 1691
BstMWI GCNNNNNNNGC 4 cut(s) 207, 840, 1306, 2075
BstNI CCWGG 7 cut(s) 525, 668, 970, 2004, 2239, 2323, 2811
BstNSI RCATGY 1 cut(s) 1121
BstPI GGTNACC 3 cut(s) 1802, 2393, 2815
BstSCI CCNGG 8 cut(s) 523, 666, 968, 2002, 2237, 2321, 2809, 2819
BstSFI CTRYAG 1 cut(s) 2292
BstSLI GKGCMC 2 cut(s) 1311, 2478
BstUI CGCG 1 cut(s) 834
BstV1I GCAGC 4 cut(s) 81, 219, 1041, 2518
BstV2I GAAGAC 3 cut(s) 742, 1209, 2664
BstX2I RGATCY 2 cut(s) 904, 1438
BstYI RGATCY 2 cut(s) 904, 1438
BstZ17I GTATAC 1 cut(s) 2424
BstZI CGGCCG 1 cut(s) 989
Bsu36I CCTNAGG 1 cut(s) 1661
BsuRI GGCC 7 cut(s) 843, 991, 1420, 1526, 1666, 2329, 2654
BtgI CCRYGG 3 cut(s) 55, 1476, 2478
BtgZI GCGATG 1 cut(s) 988
BtrI CACGTC 2 cut(s) 445, 1179
BtsCI GGATG 6 cut(s) 51, 676, 1705, 2191, 2361, 2387
BtsI GCAGTG 1 cut(s) 306
BtsIMutI CAGTG 7 cut(s) 20, 306, 361, 1107, 1152, 1718, 1822
BveI ACCTGC 1 cut(s) 2423
Cac8I GCNNGC 4 cut(s) 677, 1119, 1722, 1950
CaiI CAGNNNCTG 2 cut(s) 1466, 2810
CciI TCATGA 3 cut(s) 1792, 2257, 2514
CfoI GCGC 4 cut(s) 482, 834, 855, 1948
Cfr10I RCCGGY 4 cut(s) 934, 1379, 1748, 1973
Cfr13I GGNCC 5 cut(s) 1454, 2110, 2466, 2485, 2652
CseI GACGC 1 cut(s) 2654
Csp6I GTAC 9 cut(s) 183, 192, 216, 692, 1042, 1105, 1127, 2246, 2623
CspAI ACCGGT 2 cut(s) 934, 1748
CspCI CAANNNNNGTGG 6 cut(s) 315, 350, 1957, 1992, 2255, 2290
CviQI GTAC 9 cut(s) 183, 192, 216, 692, 1042, 1105, 1127, 2246, 2623
DraI TTTAAA 1 cut(s) 583
DriI GACNNNNNGTC 1 cut(s) 2596
EaeI YGGCCR 4 cut(s) 841, 989, 1418, 2327
EagI CGGCCG 1 cut(s) 989
Eam1104I CTCTTC 6 cut(s) 467, 1016, 1421, 1515, 2076, 2541
Eam1105I GACNNNNNGTC 1 cut(s) 2596
EarI CTCTTC 6 cut(s) 467, 1016, 1421, 1515, 2076, 2541
EciI GGCGGA 1 cut(s) 320
Ecl136II GAGCTC 1 cut(s) 2263
EclXI CGGCCG 1 cut(s) 989
Eco130I CCWWGG 4 cut(s) 55, 844, 1134, 2016
Eco147I AGGCCT 1 cut(s) 1666
Eco24I GRGCYC 1 cut(s) 2265
Eco31I GGTCTC 2 cut(s) 1388, 2209
Eco32I GATATC 1 cut(s) 436
Eco47I GGWCC 4 cut(s) 1454, 2110, 2466, 2485
Eco47III AGCGCT 1 cut(s) 481
Eco52I CGGCCG 1 cut(s) 989
Eco53kI GAGCTC 1 cut(s) 2263
Eco57I CTGAAG 2 cut(s) 20, 210
Eco81I CCTNAGG 1 cut(s) 1661
Eco91I GGTNACC 3 cut(s) 1802, 2393, 2815
EcoICRI GAGCTC 1 cut(s) 2263
EcoNI CCTNNNNNAGG 1 cut(s) 967
EcoO109I RGGNCCY 2 cut(s) 2110, 2485
EcoO65I GGTNACC 3 cut(s) 1802, 2393, 2815
EcoRI GAATTC 1 cut(s) 956
EcoRII CCWGG 7 cut(s) 523, 666, 968, 2002, 2237, 2321, 2809
EcoRV GATATC 1 cut(s) 436
EcoT14I CCWWGG 4 cut(s) 55, 844, 1134, 2016
EcoT22I ATGCAT 2 cut(s) 1119, 2404
EcoT38I GRGCYC 1 cut(s) 2265
ErhI CCWWGG 4 cut(s) 55, 844, 1134, 2016
FaqI GGGAC 2 cut(s) 1364, 2318
FauNDI CATATG 1 cut(s) 1579
FbaI TGATCA 1 cut(s) 2254
FblI GTMKAC 4 cut(s) 1005, 1899, 2423, 2600
Fnu4HI GCNGC 7 cut(s) 70, 208, 835, 989, 1030, 2532, 2676
FokI GGATG 6 cut(s) 38, 683, 1712, 2198, 2348, 2374
FriOI GRGCYC 1 cut(s) 2265
Fsp4HI GCNGC 7 cut(s) 70, 208, 835, 989, 1030, 2532, 2676
FspBI CTAG 7 cut(s) 213, 219, 428, 1050, 1265, 1365, 1553
GlaI GCGC 4 cut(s) 481, 833, 854, 1947
GluI GCNGC 7 cut(s) 70, 208, 835, 989, 1030, 2532, 2676
GsaI CCCAGC 2 cut(s) 1737, 2772
GsuI CTGGAG 4 cut(s) 1305, 1632, 2221, 2784
HaeII RGCGCY 1 cut(s) 483
HaeIII GGCC 7 cut(s) 843, 991, 1420, 1526, 1666, 2329, 2654
HapII CCGG 8 cut(s) 538, 935, 1380, 1749, 1974, 2391, 2612, 2820
HgaI GACGC 1 cut(s) 2654
HhaI GCGC 4 cut(s) 482, 834, 855, 1948
Hin6I GCGC 4 cut(s) 480, 832, 853, 1946
HinP1I GCGC 4 cut(s) 480, 832, 853, 1946
HincII GTYRAC 4 cut(s) 1083, 1683, 2139, 2410
HindII GTYRAC 4 cut(s) 1083, 1683, 2139, 2410
HpaI GTTAAC 2 cut(s) 1083, 2410
HpaII CCGG 8 cut(s) 538, 935, 1380, 1749, 1974, 2391, 2612, 2820
Hpy188I TCNGA 9 cut(s) 39, 944, 1018, 1069, 1925, 2133, 2209, 2288, 2806
Hpy99I CGWCG 2 cut(s) 1520, 2495
HpyAV CCTTC 9 cut(s) 41, 140, 505, 1072, 1405, 1646, 1735, 2562, 2818
HpyCH4III ACNGT 6 cut(s) 24, 376, 388, 1102, 2129, 2293
HpyCH4IV ACGT 3 cut(s) 444, 1044, 1178
HpyF10VI GCNNNNNNNGC 4 cut(s) 207, 840, 1306, 2075
HpySE526I ACGT 3 cut(s) 444, 1044, 1178
HspAI GCGC 4 cut(s) 480, 832, 853, 1946
Ksp22I TGATCA 1 cut(s) 2254
KspAI GTTAAC 2 cut(s) 1083, 2410
LguI GCTCTTC 3 cut(s) 467, 2076, 2541
LmnI GCTCC 9 cut(s) 469, 514, 611, 817, 1026, 2020, 2125, 2268, 2765
Lsp1109I GCAGC 4 cut(s) 81, 219, 1041, 2518
LweI GCATC 6 cut(s) 286, 643, 1215, 2176, 2411, 2697
MaeI CTAG 7 cut(s) 213, 219, 428, 1050, 1265, 1365, 1553
MaeII ACGT 3 cut(s) 444, 1044, 1178
MbiI CCGCTC 3 cut(s) 551, 2120, 2686
MfeI CAATTG 1 cut(s) 2457
MflI RGATCY 2 cut(s) 904, 1438
MhlI GDGCHC 3 cut(s) 1311, 2265, 2478
MlsI TGGCCA 3 cut(s) 843, 1420, 2329
MluNI TGGCCA 3 cut(s) 843, 1420, 2329
MlyI GAGTC 9 cut(s) 373, 550, 925, 1181, 1366, 1678, 1790, 2166, 2228
MmeI TCCRAC 1 cut(s) 1753
Mox20I TGGCCA 3 cut(s) 843, 1420, 2329
Mph1103I ATGCAT 2 cut(s) 1119, 2404
MroXI GAANNNNTTC 1 cut(s) 1544
MscI TGGCCA 3 cut(s) 843, 1420, 2329
MslI CAYNNNNRTG 3 cut(s) 374, 1481, 2372
Msp20I TGGCCA 3 cut(s) 843, 1420, 2329
MspA1I CMGCKG 3 cut(s) 1737, 1879, 2078
MspI CCGG 8 cut(s) 538, 935, 1380, 1749, 1974, 2391, 2612, 2820
MspR9I CCNGG 8 cut(s) 525, 668, 970, 2004, 2239, 2323, 2811, 2821
MunI CAATTG 1 cut(s) 2457
Mva1269I GAATGC 2 cut(s) 1276, 1747
MvaI CCWGG 7 cut(s) 525, 668, 970, 2004, 2239, 2323, 2811
MvnI CGCG 1 cut(s) 834
MwoI GCNNNNNNNGC 4 cut(s) 207, 840, 1306, 2075
NciI CCSGG 1 cut(s) 2821
NcoI CCATGG 1 cut(s) 55
NdeI CATATG 1 cut(s) 1579
NlaIV GGNNCC 8 cut(s) 516, 613, 906, 1440, 1456, 1657, 2112, 2487
NmeAIII GCCGAG 1 cut(s) 572
NsiI ATGCAT 2 cut(s) 1119, 2404
NspI RCATGY 1 cut(s) 1121
PaeI GCATGC 1 cut(s) 1121
PagI TCATGA 3 cut(s) 1792, 2257, 2514
PceI AGGCCT 1 cut(s) 1666
PciSI GCTCTTC 3 cut(s) 467, 2076, 2541
PcsI WCGNNNNNNNCGW 2 cut(s) 948, 2652
PctI GAATGC 2 cut(s) 1276, 1747
PdmI GAANNNNTTC 1 cut(s) 1544
PfeI GAWTC 5 cut(s) 1164, 1335, 1463, 1958, 2055
PflFI GACNNNGTC 1 cut(s) 662
PflMI CCANNNNNTGG 1 cut(s) 1700
PfoI TCCNGGA 1 cut(s) 666
PinAI ACCGGT 2 cut(s) 934, 1748
PkrI GCNGC 7 cut(s) 71, 209, 836, 990, 1031, 2533, 2677
Ple19I CGATCG 1 cut(s) 1691
PleI GAGTC 9 cut(s) 373, 549, 924, 1181, 1366, 1678, 1790, 2166, 2228
PpsI GAGTC 9 cut(s) 373, 549, 924, 1181, 1366, 1678, 1790, 2166, 2228
PpuMI RGGWCCY 2 cut(s) 2110, 2485
PsiI TTATAA 2 cut(s) 929, 2669
Psp124BI GAGCTC 1 cut(s) 2265
Psp5II RGGWCCY 2 cut(s) 2110, 2485
Psp6I CCWGG 7 cut(s) 523, 666, 968, 2002, 2237, 2321, 2809
PspEI GGTNACC 3 cut(s) 1802, 2393, 2815
PspFI CCCAGC 2 cut(s) 1733, 2768
PspGI CCWGG 7 cut(s) 523, 666, 968, 2002, 2237, 2321, 2809
PspN4I GGNNCC 8 cut(s) 516, 613, 906, 1440, 1456, 1657, 2112, 2487
PspPI GGNCC 5 cut(s) 1454, 2110, 2466, 2485, 2652
PspPPI RGGWCCY 2 cut(s) 2110, 2485
PstNI CAGNNNCTG 2 cut(s) 1466, 2810
PsuI RGATCY 2 cut(s) 904, 1438
PsyI GACNNNGTC 1 cut(s) 662
PvuI CGATCG 1 cut(s) 1691
PvuII CAGCTG 3 cut(s) 1737, 1879, 2078
RsaI GTAC 9 cut(s) 184, 193, 217, 693, 1043, 1106, 1128, 2247, 2624
RsaNI GTAC 9 cut(s) 183, 192, 216, 692, 1042, 1105, 1127, 2246, 2623
RseI CAYNNNNRTG 3 cut(s) 374, 1481, 2372
SacI GAGCTC 1 cut(s) 2265
SapI GCTCTTC 3 cut(s) 467, 2076, 2541
SatI GCNGC 7 cut(s) 70, 208, 835, 989, 1030, 2532, 2676
Sau96I GGNCC 5 cut(s) 1454, 2110, 2466, 2485, 2652
ScaI AGTACT 3 cut(s) 184, 193, 217
SchI GAGTC 9 cut(s) 373, 550, 925, 1181, 1366, 1678, 1790, 2166, 2228
ScrFI CCNGG 8 cut(s) 525, 668, 970, 2004, 2239, 2323, 2811, 2821
SduI GDGCHC 3 cut(s) 1311, 2265, 2478
SfaNI GCATC 6 cut(s) 286, 643, 1215, 2176, 2411, 2697
SfcI CTRYAG 1 cut(s) 2292
SinI GGWCC 4 cut(s) 1454, 2110, 2466, 2485
SmiMI CAYNNNNRTG 3 cut(s) 374, 1481, 2372
SmlI CTYRAG 2 cut(s) 653, 2346
SmoI CTYRAG 2 cut(s) 653, 2346
SpeI ACTAGT 3 cut(s) 212, 218, 1264
SphI GCATGC 1 cut(s) 1121
SseBI AGGCCT 1 cut(s) 1666
SspI AATATT 1 cut(s) 1013
SspMI CTAG 7 cut(s) 213, 219, 428, 1050, 1265, 1365, 1553
SstI GAGCTC 1 cut(s) 2265
StuI AGGCCT 1 cut(s) 1666
StyD4I CCNGG 8 cut(s) 523, 666, 968, 2002, 2237, 2321, 2809, 2819
StyI CCWWGG 4 cut(s) 55, 844, 1134, 2016
TaaI ACNGT 6 cut(s) 24, 376, 388, 1102, 2129, 2293
TaiI ACGT 3 cut(s) 447, 1047, 1181
TaqI TCGA 9 cut(s) 133, 454, 979, 1149, 1518, 1625, 1687, 2058, 2358
TatI WGTACW 6 cut(s) 182, 191, 215, 691, 2245, 2622
TauI GCSGC 3 cut(s) 837, 991, 2678
TfiI GAWTC 5 cut(s) 1164, 1335, 1463, 1958, 2055
TscAI CASTG 7 cut(s) 27, 306, 361, 1107, 1159, 1718, 1829
TseI GCWGC 4 cut(s) 69, 207, 1029, 2531
TspGWI ACGGA 6 cut(s) 133, 299, 356, 1493, 1504, 2495
TspRI CASTG 7 cut(s) 27, 306, 361, 1107, 1159, 1718, 1829
Tth111I GACNNNGTC 1 cut(s) 662
Van91I CCANNNNNTGG 1 cut(s) 1700
VpaK11BI GGWCC 4 cut(s) 1454, 2110, 2466, 2485
XagI CCTNNNNNAGG 1 cut(s) 967
XapI RAATTY 2 cut(s) 956, 1358
XceI RCATGY 1 cut(s) 1121
XcmI CCANNNNNNNNNTGG 2 cut(s) 331, 2575
XmiI GTMKAC 4 cut(s) 1005, 1899, 2423, 2600
XmnI GAANNNNTTC 1 cut(s) 1544
XspI CTAG 7 cut(s) 213, 219, 428, 1050, 1265, 1365, 1553
ZrmI AGTACT 3 cut(s) 184, 193, 217
Zsp2I ATGCAT 2 cut(s) 1119, 2404
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.