RchiOBHm_Chr1g0314111

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
1398352 .. 1403844
5493 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ54479

Sequence Viewer

Length: 2355 bp
ATGGCGATAGGAAAAGAGAAGGAAGCGATCAAGGGGCACTCGCACAGAGTGAGGAGAGACGTTGAGGAGGTGATATATGAGAGTGAATTCAGCATCCCAGCAGGTTTTGGAGAGATTGGAGCTGTTCTGGTTGAGAATGAGCACCACAAGGAGATTTACATCCAGACCATCGACCTCACCGGCTTCCCAAATGCCTCCACTCTCTCCATTTCCTGTACCTCCTGGGTTCATTCCAAACATTATAATGCACAGAAGAGAGTTTTCTTCACCAACAAGTCTTACTTGCCATCAGACACTCCAAGTGGGTTGAAGAGGCTAAGAGAAATGGAGCTGCAAAATTTGCGAGGAAATGGAGAGGGCGAAAGAAAAACATCGGACAGGATTTACGATTATGATAAATATAATGATCTCGGAGTTCCAGATAGCAAACTGGCTAGGCCAGTCCTGGGGGGCAAAGAGCTTCCCTACCCTAGGCGCTGCAGAACAGGACGTCCACGCACTGAAAAGGACCCATTATCTGAAGAAAGAAGCACCAATGTGTATATACCAAGAGATGAAGCGTTTTCAGAGGAGAAACATCTGACATTCTCAGGAAAGACACTAAAATCTGTGCTGCACGCTTTGCTCCCTCAGCTTGAGATATCACTTATTGATCGGGACTTGGGATTTCCACTCTTCAAAGAAATAGATTCATTGTTTAATGAAGGCATTGCATTGCCTAAGCCAAAAACAATTGGTTTTTTTAGGTCAATCATTCCAAGGCTAGTGAAGGCTGTCAGTGATGGGCAGAACGATCTTTTGCTCTTTGAGACCCCTGCAATGCTTGACCGTGATAAATTTTCTTGGTTCAGAGATGAAGAATTTTCTCGGCAAACTCTAGCTGGTCTTAATCCATTTAGTATTGAGCTAGTTAAGGAATGGCCACTGAAAAGTAAACTTGACCCTGAGATTTACGGCCCCCCTGAATCATTGATTACTACTGAACTGGTGGAGAAAGAGATCAAGGGTTTCATGACTGTCAATGAGGCCTTGGACAAAAAGAAGCTGTTTCTTTTGGATTATCATGACCTGCTCATTCCTTTAGTGAACAAAGTGAGAGAAATTGAAGGGACCACATTGTATGGTTCTCGGACACTATTCTTTCTCACTGAGAATGGCTCGCTGAGGCCTGTTGCTATTGAACTTACTCGGCCACCAATTGGTGACAAGCCACAATGGAAGCAAGTCTTCGTCCCATGCTGGGATGCCACCGGTGCCTGGCTATGGAGGCTTGCTAAAGCTCATGTTTGTGCTCATGACTCTGGCTATCATCAGCTTGTGATCCACTGGCTGCGGACTCATTGTGTGACAGAGCCATACATAATTGCAGCTAATCGGCAAATGAGTGCTATGCATCCCATTTATAGGCTTCTTTGTCCTCATTTTCGGTATACAATGGAAATCAATGCCCTGGCTCGAGAAAGCCTCATTAACGCAGGCGGAGTCATTGAGAGTAGCTTTTCACCAGGAAAGTACTCCATGGAGCTCAGTTCTGCTGCGTATGACCAGCTCTGGCGCTTTGACATGGAAGCTTTGCCAGCCGATCTGATAAGAAGAGGAATGGCAGTTGAGGATCCTACAGCCAAGCATGGTCTGAAGCTAACAATTGAAGACTATCCTTTTGCAAACGATGGTCTTATTCTTTGGGATGCCATTAACCAGTGGGTGAGCGACTATGTAAATCACTACTACCCAGACGCTAGTCTTGTTAAATGTGATCAGGAGCTTCAGGGTTGGTGGACAGAAGTTAGAACTAAAGGCCATGAAGACAAAAAAGATGAGCCATGGTGGCCTGTTTTGGAAACCCCAGAAGATCTCATTCATGTTTTGACAACAATAATTTGGGTGACATCCGGTCATCATGCAGCAGTGAACTTTGGTCAGTACACATACGCTGGATACTTTCCAAACCGACCTACAATAGCTCGAACCAACATGCCATGTGAAGATCCATCCGAGGAGGTTGTCAATACTTTTATGACGAAACCCGAAACAATACTGCTAAACTGCTTTCCCTCAAAGATTCAAGCAACAACAGTGATGGCTGTGTTAGATGTGTTATCGACACATTCACCTGATGAGGAGTATATTGGTGAGATTTTGGAGCCATCTTGGACTGAAAATCCTGTTATAATGGATGCATTCGAGTGTTTCAAAGACAGTTTAAAAGAGCTAGAAAGAATTATTAATCAGAGGAACGCCGATAAGAACCTGAAAAACAGAGTTGGAGCAGGGGTTGTTCCATATGAGCTTCTGAAACCATTCTCAAAACAAGGGGTCACAGGAATGGGAGTCCCTAATAGCATCTCCATCTAA

Protein Analysis

784

Amino Acids

89.45

Weight (kDa)

5.68

Isoelectric Point (pI)

42.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 20 - 89 4.1e-06 PLAT/LH2 domain
Lipoxygenase PF00305 102 - 767 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000211)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45140 AT3G45140
fragaria_vesca FvH4_3g43530 FvH4_3g43540 FvH4_3g43540 FvH4_5g05680 FvH4_5g26250 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00420 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440
malus_domestica MD02G1317800.v1.1 MD03G1021200.v1.1 MD07G1003600.v1.1 MD07G1003700.v1.1 MD07G1003900.v1.1 MD07G1004500.v1.1 MD11G1023100.v1.1
prunus_persica Prupe.2G005300_v2.0.a1 Prupe.2G005300_v2.0.a1 Prupe.2G005500_v2.0.a1 Prupe.2G005800_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1
pyrus_communis pycom02g26570 pycom02g26590 pycom02g26600 pycom07g00350 pycom11g01870
rosa_chinensis RchiOBHm_Chr1g0314111 RchiOBHm_Chr1g0314131 RchiOBHm_Chr1g0314151 RchiOBHm_Chr5g0078061 RchiOBHm_Chr5g0078091 RchiOBHm_Chr6g0285041 RchiOBHm_Chr6g0285051 RchiOBHm_Chr7g0216951
rosa_laevigata RLG00000002519 RLG00000002520 RLG00000002523 RLG00000002524 RLG00000002526 RLG00000012683 RLG00000030702 RLG00000030773 RLG00000030774 RLG00000030775 RLG00000036743 RLG00000036744 RLG00000036746 RLG00000036748
rosa_multiflora Rmu_co8050096.1_g000001 Rmu_co8091784.1_g000001 Rmu_co8342063.1_g000001 Rmu_co8353481.1_g000001 Rmu_co8390647.1_g000001 Rmu_sc0000670.1_g000032 Rmu_sc0000854.1_g000025 Rmu_sc0002478.1_g000009 Rmu_sc0004992.1_g000003 Rmu_sc0006851.1_g000003 Rmu_sc0009311.1_g000001 Rmu_sc0009311.1_g000005 Rmu_ssc0000154.1_g000036 Rmu_ssc0000154.1_g000041
rosa_roxburghii Rroxscaffold_1G00000310 Rroxscaffold_1G00000320 Rroxscaffold_1G00000330 Rroxscaffold_1G00000340 Rroxscaffold_1G00004130 Rroxscaffold_1G00004190 Rroxscaffold_3G00242690 Rroxscaffold_3G00242700 Rroxscaffold_3G00242710 Rroxscaffold_3G00242720 Rroxscaffold_3G00242740 Rroxscaffold_4G00332030 Rroxscaffold_4G00332050 Rroxscaffold_4G00332060 Rroxscaffold_6G00427990 Rroxscaffold_7G00183800 Rroxscaffold_7G00184080
rosa_rugosa Rorug01G0000100 Rorug01G0000200 Rorug01G0130400 Rorug05G0458200 Rorug05G0458300 Rorug05G0458400 Rorug06G0170200 Rorug07G0164500 RorugPtG0006300 RorugPtG0006400 RorugPtG0006500
rosa_samantha Rh1AG008700 Rh1AG008800 Rh1BG002100 Rh1BG002200 Rh1BG002700 Rh1BG012600 Rh1BG012900 Rh1BG120700 Rh1DG004500 Rh1DG004600 Rh1DG004700 Rh1DG004800 Rh1DG013000 Rh5BG535400 Rh5CG558800 Rh5DG547500 Rh5DG547600 Rh6AG281900 Rh6BG282500 Rh6CG284200 Rh6CG284300 Rh6CG284400 Rh6DG277500 Rh6DG277600 Rh7AG304700 Rh7BG296300 Rh7CG323200 Rh7CG323300 Rh7CG323400 Rh7CG323500 Rh7CG323800 Rh7DG304900
rosa_wichuraiana Rw1G000380 Rw1G000390 Rw1G000400 Rw5G047570 Rw5G047580 Rw6G024220 Rw7G025870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 243, 2171
AatII GACGTC 1 cut(s) 493
Acc36I ACCTGC 2 cut(s) 92, 1077
AccB1I GGYRCC 1 cut(s) 1253
AccB7I CCANNNNNTGG 1 cut(s) 1199
AccI GTMKAC 1 cut(s) 1430
AciI CCGC 2 cut(s) 1333, 1479
AclWI GGATC 4 cut(s) 1315, 1607, 1620, 1982
AcoI YGGCCR 2 cut(s) 920, 1190
AcsI RAATTY 4 cut(s) 86, 337, 836, 860
AcuI CTGAAG 3 cut(s) 540, 1655, 1751
AcyI GRCGYC 1 cut(s) 490
AdeI CACNNNGTG 1 cut(s) 49
AfaI GTAC 3 cut(s) 217, 1514, 1925
AfiI CCNNNNNNNGG 7 cut(s) 446, 471, 1199, 1240, 1257, 1263, 1404
AgeI ACCGGT 1 cut(s) 1250
AgsI TTSAA 7 cut(s) 310, 679, 1106, 1181, 1649, 2066, 2194
AhdI GACNNNNNGTC 1 cut(s) 1893
AjnI CCWGG 5 cut(s) 221, 444, 1256, 1449, 1504
AleI CACNNNNGTG 1 cut(s) 536
AloI GAACNNNNNNTCC 2 cut(s) 475, 507
Alw21I GWGCWC 3 cut(s) 144, 1294, 1527
Alw26I GTCTC 2 cut(s) 51, 803
AlwI GGATC 4 cut(s) 1315, 1607, 1620, 1982
Ama87I CYCGRG 1 cut(s) 1455
AoxI GGCC 8 cut(s) 437, 920, 955, 1026, 1166, 1190, 1798, 1829
ApeKI GCWGC 7 cut(s) 331, 477, 613, 1330, 1367, 1535, 1904
ApoI RAATTY 4 cut(s) 86, 337, 836, 860
ArsI GACNNNNNNTTYG 2 cut(s) 1643, 1675
AseI ATTAAT 1 cut(s) 2226
AsiGI ACCGGT 1 cut(s) 1250
Asp700I GAANNNNTTC 1 cut(s) 2300
AspA2I CCTAGG 1 cut(s) 470
AspLEI GCGC 2 cut(s) 477, 1557
AspS9I GGNCC 3 cut(s) 508, 956, 1110
AsuHPI GGTGA 9 cut(s) 82, 169, 259, 1214, 1494, 1717, 1897, 2103, 2144
AvaI CYCGRG 1 cut(s) 1455
AvaII GGWCC 2 cut(s) 508, 1110
AvrII CCTAGG 1 cut(s) 470
BaeGI GKGCMC 1 cut(s) 39
BalI TGGCCA 1 cut(s) 922
BamHI GGATCC 1 cut(s) 1612
BanI GGYRCC 1 cut(s) 1253
BanII GRGCYC 1 cut(s) 1527
BbsI GAAGAC 3 cut(s) 1219, 1656, 1812
Bbv12I GWGCWC 3 cut(s) 144, 1294, 1527
BbvCI CCTCAGC 2 cut(s) 630, 1163
BbvI GCAGC 7 cut(s) 318, 464, 600, 1317, 1379, 1522, 1916
BccI CCATC 7 cut(s) 176, 295, 776, 1664, 1999, 2074, 2155
BceAI ACGGC 1 cut(s) 970
BciT130I CCWGG 5 cut(s) 223, 446, 1258, 1451, 1506
BciVI GTATCC 1 cut(s) 1931
BclI TGATCA 1 cut(s) 1756
BcoDI GTCTC 2 cut(s) 51, 803
BfaI CTAG 7 cut(s) 435, 471, 764, 878, 908, 1740, 2213
BfmI CTRYAG 2 cut(s) 478, 1617
BfoI RGCGCY 2 cut(s) 478, 1558
BfuAI ACCTGC 2 cut(s) 92, 1077
BfuI GTATCC 1 cut(s) 1931
BglI GCCNNNNNGGC 1 cut(s) 1828
BglII AGATCT 1 cut(s) 1852
BisI GCNGC 7 cut(s) 332, 478, 614, 1331, 1368, 1536, 1905
BlnI CCTAGG 1 cut(s) 470
BlsI GCNGC 7 cut(s) 333, 479, 615, 1332, 1369, 1537, 1906
BmcAI AGTACT 1 cut(s) 1514
Bme1390I CCNGG 5 cut(s) 223, 446, 1258, 1451, 1506
Bme18I GGWCC 2 cut(s) 508, 1110
BmeRI GACNNNNNGTC 1 cut(s) 1893
BmeT110I CYCGRG 1 cut(s) 1455
BmgT120I GGNCC 3 cut(s) 508, 956, 1110
BmiI GGNNCC 6 cut(s) 510, 958, 1111, 1255, 1614, 2145
BmrFI CCNGG 5 cut(s) 223, 446, 1258, 1451, 1506
BmsI GCATC 5 cut(s) 102, 1234, 1402, 1678, 2167
BoxI GACNNNNGTC 1 cut(s) 1740
BpiI GAAGAC 3 cut(s) 1219, 1656, 1812
BplI GAGNNNNNCTC 4 cut(s) 1142, 1174, 1449, 1481
Bpu10I CCTNAGC 3 cut(s) 630, 720, 1163
BpuEI CTTGAG 1 cut(s) 656
BsaBI GATNNNNATC 1 cut(s) 158
BsaHI GRCGYC 1 cut(s) 490
BsaI GGTCTC 1 cut(s) 803
BsaJI CCNNGG 9 cut(s) 222, 445, 470, 758, 1029, 1449, 1518, 1823, 1995
BsaWI WCCGGW 2 cut(s) 1250, 1892
BsaXI ACNNNNNCTCC 2 cut(s) 2259, 2289
Bsc4I CCNNNNNNNGG 7 cut(s) 446, 471, 1199, 1240, 1257, 1263, 1404
Bse118I RCCGGY 2 cut(s) 179, 1250
Bse1I ACTGG 5 cut(s) 435, 440, 990, 1331, 1699
Bse3DI GCAATG 3 cut(s) 708, 713, 825
Bse8I GATNNNNATC 1 cut(s) 158
BseBI CCWGG 5 cut(s) 223, 446, 1258, 1451, 1506
BseDI CCNNGG 9 cut(s) 222, 445, 470, 758, 1029, 1449, 1518, 1823, 1995
BseGI GGATG 8 cut(s) 93, 159, 1249, 1393, 1693, 1889, 1991, 2182
BseJI GATNNNNATC 1 cut(s) 158
BseLI CCNNNNNNNGG 7 cut(s) 446, 471, 1199, 1240, 1257, 1263, 1404
BseMI GCAATG 3 cut(s) 708, 713, 825
BseMII CTCAG 6 cut(s) 603, 644, 936, 1140, 1154, 1540
BseNI ACTGG 5 cut(s) 435, 440, 990, 1331, 1699
BseRI GAGGAG 5 cut(s) 67, 80, 584, 2012, 2135
BseSI GKGCMC 1 cut(s) 39
BseXI GCAGC 7 cut(s) 318, 464, 600, 1317, 1379, 1522, 1916
BseYI CCCAGC 2 cut(s) 97, 1239
BsgI GTGCAG 1 cut(s) 599
BshFI GGCC 8 cut(s) 439, 922, 957, 1028, 1168, 1192, 1800, 1831
BshNI GGYRCC 1 cut(s) 1253
BshTI ACCGGT 1 cut(s) 1250
BsiHKAI GWGCWC 3 cut(s) 144, 1294, 1527
BsiHKCI CYCGRG 1 cut(s) 1455
BsiSI CCGG 3 cut(s) 180, 1251, 1893
BslFI GGGAC 4 cut(s) 671, 1123, 1217, 2318
BslI CCNNNNNNNGG 7 cut(s) 446, 471, 1199, 1240, 1257, 1263, 1404
BsmAI GTCTC 2 cut(s) 51, 803
BsmBI CGTCTC 1 cut(s) 51
BsmFI GGGAC 4 cut(s) 671, 1123, 1217, 2318
BsmI GAATGC 1 cut(s) 2180
BsnI GGCC 8 cut(s) 439, 922, 957, 1028, 1168, 1192, 1800, 1831
Bso31I GGTCTC 1 cut(s) 803
BsoBI CYCGRG 1 cut(s) 1455
Bsp1286I GDGCHC 4 cut(s) 39, 144, 1294, 1527
Bsp19I CCATGG 2 cut(s) 1518, 1823
BspACI CCGC 2 cut(s) 1333, 1479
BspANI GGCC 8 cut(s) 439, 922, 957, 1028, 1168, 1192, 1800, 1831
BspCNI CTCAG 6 cut(s) 602, 643, 937, 1141, 1155, 1539
BspHI TCATGA 3 cut(s) 1011, 1063, 1294
BspLI GGNNCC 6 cut(s) 510, 958, 1111, 1255, 1614, 2145
BspMAI CTGCAG 1 cut(s) 482
BspMI ACCTGC 2 cut(s) 92, 1077
BspPI GGATC 4 cut(s) 1315, 1607, 1620, 1982
BspT107I GGYRCC 1 cut(s) 1253
BspTNI GGTCTC 1 cut(s) 803
BsrDI GCAATG 3 cut(s) 708, 713, 825
BsrFI RCCGGY 2 cut(s) 179, 1250
BsrI ACTGG 5 cut(s) 435, 440, 990, 1331, 1699
BssAI RCCGGY 2 cut(s) 179, 1250
BssECI CCNNGG 9 cut(s) 222, 445, 470, 758, 1029, 1449, 1518, 1823, 1995
BssNAI GTATAC 1 cut(s) 1431
BssNI GRCGYC 1 cut(s) 490
BssT1I CCWWGG 5 cut(s) 470, 758, 1029, 1518, 1823
Bst1107I GTATAC 1 cut(s) 1431
Bst2UI CCWGG 5 cut(s) 223, 446, 1258, 1451, 1506
Bst4CI ACNGT 4 cut(s) 830, 1018, 2077, 2201
Bst6I CTCTTC 4 cut(s) 248, 305, 680, 1588
BstACI GRCGYC 1 cut(s) 490
BstAPI GCANNNNNTGC 2 cut(s) 340, 622
BstC8I GCNNGC 5 cut(s) 618, 1160, 1272, 1477, 1578
BstDEI CTNAG 8 cut(s) 317, 589, 630, 720, 945, 1149, 1163, 1526
BstDSI CCRYGG 2 cut(s) 1518, 1823
BstENI CCTNNNNNAGG 1 cut(s) 469
BstF5I GGATG 8 cut(s) 93, 159, 1249, 1393, 1693, 1889, 1991, 2182
BstH2I RGCGCY 2 cut(s) 478, 1558
BstHHI GCGC 2 cut(s) 477, 1557
BstMAI GTCTC 2 cut(s) 51, 803
BstMWI GCNNNNNNNGC 7 cut(s) 340, 622, 631, 1253, 1267, 1577, 1828
BstNI CCWGG 5 cut(s) 223, 446, 1258, 1451, 1506
BstNSI RCATGY 1 cut(s) 1978
BstPAI GACNNNNGTC 1 cut(s) 1740
BstSCI CCNGG 5 cut(s) 221, 444, 1256, 1449, 1504
BstSFI CTRYAG 2 cut(s) 478, 1617
BstSLI GKGCMC 1 cut(s) 39
BstV1I GCAGC 7 cut(s) 318, 464, 600, 1317, 1379, 1522, 1916
BstV2I GAAGAC 3 cut(s) 1219, 1656, 1812
BstX2I RGATCY 3 cut(s) 1612, 1852, 1987
BstYI RGATCY 3 cut(s) 1612, 1852, 1987
BstZ17I GTATAC 1 cut(s) 1431
BsuI GTATCC 1 cut(s) 1931
BsuRI GGCC 8 cut(s) 439, 922, 957, 1028, 1168, 1192, 1800, 1831
BtgI CCRYGG 2 cut(s) 1518, 1823
BtsCI GGATG 8 cut(s) 93, 159, 1249, 1393, 1693, 1889, 1991, 2182
BtsI GCAGTG 1 cut(s) 1914
BtsIMutI CAGTG 8 cut(s) 498, 784, 923, 1146, 1324, 1706, 1914, 2082
BveI ACCTGC 2 cut(s) 92, 1077
Cac8I GCNNGC 5 cut(s) 618, 1160, 1272, 1477, 1578
CciI TCATGA 3 cut(s) 1011, 1063, 1294
CfoI GCGC 2 cut(s) 477, 1557
Cfr10I RCCGGY 2 cut(s) 179, 1250
Cfr13I GGNCC 3 cut(s) 508, 956, 1110
CseI GACGC 1 cut(s) 1745
Csp6I GTAC 3 cut(s) 216, 1513, 1924
CspAI ACCGGT 1 cut(s) 1250
CviQI GTAC 3 cut(s) 216, 1513, 1924
DdeI CTNAG 8 cut(s) 317, 589, 630, 720, 945, 1149, 1163, 1526
DraI TTTAAA 1 cut(s) 2205
DraIII CACNNNGTG 1 cut(s) 49
DriI GACNNNNNGTC 1 cut(s) 1893
EaeI YGGCCR 2 cut(s) 920, 1190
Eam1104I CTCTTC 4 cut(s) 248, 305, 680, 1588
Eam1105I GACNNNNNGTC 1 cut(s) 1893
EarI CTCTTC 4 cut(s) 248, 305, 680, 1588
EciI GGCGGA 1 cut(s) 1494
Ecl136II GAGCTC 1 cut(s) 1525
Eco130I CCWWGG 5 cut(s) 470, 758, 1029, 1518, 1823
Eco147I AGGCCT 2 cut(s) 1028, 1168
Eco24I GRGCYC 1 cut(s) 1527
Eco31I GGTCTC 1 cut(s) 803
Eco32I GATATC 1 cut(s) 642
Eco47I GGWCC 2 cut(s) 508, 1110
Eco53kI GAGCTC 1 cut(s) 1525
Eco57I CTGAAG 3 cut(s) 540, 1655, 1751
Eco88I CYCGRG 1 cut(s) 1455
EcoICRI GAGCTC 1 cut(s) 1525
EcoNI CCTNNNNNAGG 1 cut(s) 469
EcoO109I RGGNCCY 1 cut(s) 508
EcoRI GAATTC 1 cut(s) 86
EcoRII CCWGG 5 cut(s) 221, 444, 1256, 1449, 1504
EcoRV GATATC 1 cut(s) 642
EcoT14I CCWWGG 5 cut(s) 470, 758, 1029, 1518, 1823
EcoT22I ATGCAT 2 cut(s) 1395, 2182
EcoT38I GRGCYC 1 cut(s) 1527
ErhI CCWWGG 5 cut(s) 470, 758, 1029, 1518, 1823
Esp3I CGTCTC 1 cut(s) 51
FalI AAGNNNNNCTT 4 cut(s) 266, 298, 1211, 1243
FaqI GGGAC 4 cut(s) 671, 1123, 1217, 2318
FauNDI CATATG 1 cut(s) 2284
FbaI TGATCA 1 cut(s) 1756
FblI GTMKAC 1 cut(s) 1430
Fnu4HI GCNGC 7 cut(s) 332, 478, 614, 1331, 1368, 1536, 1905
FokI GGATG 8 cut(s) 80, 146, 1256, 1380, 1700, 1876, 1978, 2189
FriOI GRGCYC 1 cut(s) 1527
Fsp4HI GCNGC 7 cut(s) 332, 478, 614, 1331, 1368, 1536, 1905
FspBI CTAG 7 cut(s) 435, 471, 764, 878, 908, 1740, 2213
GlaI GCGC 2 cut(s) 476, 1556
GluI GCNGC 7 cut(s) 332, 478, 614, 1331, 1368, 1536, 1905
GsaI CCCAGC 2 cut(s) 101, 1243
HaeII RGCGCY 2 cut(s) 478, 1558
HaeIII GGCC 8 cut(s) 439, 922, 957, 1028, 1168, 1192, 1800, 1831
HapII CCGG 3 cut(s) 180, 1251, 1893
HgaI GACGC 1 cut(s) 1745
HhaI GCGC 2 cut(s) 477, 1557
Hin1I GRCGYC 1 cut(s) 490
Hin6I GCGC 2 cut(s) 475, 1555
HinP1I GCGC 2 cut(s) 475, 1555
HindIII AAGCTT 1 cut(s) 1569
HinfI GANTC 7 cut(s) 689, 965, 1298, 1336, 1482, 2062, 2331
HpaII CCGG 3 cut(s) 180, 1251, 1893
HphI GGTGA 9 cut(s) 82, 169, 259, 1214, 1494, 1717, 1897, 2103, 2144
Hpy166II GTNNAC 7 cut(s) 494, 935, 1087, 1431, 1779, 1912, 1926
Hpy188III TCNNGA 9 cut(s) 163, 419, 591, 656, 1012, 1064, 1295, 1457, 1760
Hpy8I GTNNAC 7 cut(s) 494, 935, 1087, 1431, 1779, 1912, 1926
HpyAV CCTTC 4 cut(s) 13, 698, 763, 1100
HpyCH4III ACNGT 4 cut(s) 830, 1018, 2077, 2201
HpyCH4IV ACGT 2 cut(s) 60, 490
HpyF10VI GCNNNNNNNGC 7 cut(s) 340, 622, 631, 1253, 1267, 1577, 1828
HpyF3I CTNAG 8 cut(s) 317, 589, 630, 720, 945, 1149, 1163, 1526
HpySE526I ACGT 2 cut(s) 60, 490
Hsp92I GRCGYC 1 cut(s) 490
HspAI GCGC 2 cut(s) 475, 1555
Ksp22I TGATCA 1 cut(s) 1756
LmnI GCTCC 7 cut(s) 119, 328, 630, 1522, 1762, 2143, 2267
Lsp1109I GCAGC 7 cut(s) 318, 464, 600, 1317, 1379, 1522, 1916
LweI GCATC 5 cut(s) 102, 1234, 1402, 1678, 2167
MaeI CTAG 7 cut(s) 435, 471, 764, 878, 908, 1740, 2213
MaeII ACGT 2 cut(s) 60, 490
MaeIII GTNAC 4 cut(s) 1202, 1345, 1885, 2317
MfeI CAATTG 3 cut(s) 732, 1197, 1644
MflI RGATCY 3 cut(s) 1612, 1852, 1987
MhlI GDGCHC 4 cut(s) 39, 144, 1294, 1527
MlsI TGGCCA 1 cut(s) 922
MluNI TGGCCA 1 cut(s) 922
MlyI GAGTC 4 cut(s) 1292, 1330, 1491, 2340
MmeI TCCRAC 1 cut(s) 2245
Mox20I TGGCCA 1 cut(s) 922
Mph1103I ATGCAT 2 cut(s) 1395, 2182
MroXI GAANNNNTTC 1 cut(s) 2300
MscI TGGCCA 1 cut(s) 922
MseI TTAA 8 cut(s) 699, 888, 912, 1470, 1695, 1749, 2204, 2226
MslI CAYNNNNRTG 5 cut(s) 243, 536, 1287, 2185, 2324
Msp20I TGGCCA 1 cut(s) 922
MspI CCGG 3 cut(s) 180, 1251, 1893
MspR9I CCNGG 5 cut(s) 223, 446, 1258, 1451, 1506
MunI CAATTG 3 cut(s) 732, 1197, 1644
Mva1269I GAATGC 1 cut(s) 2180
MvaI CCWGG 5 cut(s) 223, 446, 1258, 1451, 1506
MwoI GCNNNNNNNGC 7 cut(s) 340, 622, 631, 1253, 1267, 1577, 1828
NcoI CCATGG 2 cut(s) 1518, 1823
NdeI CATATG 1 cut(s) 2284
NlaIV GGNNCC 6 cut(s) 510, 958, 1111, 1255, 1614, 2145
NmeAIII GCCGAG 2 cut(s) 847, 1168
NmuCI GTSAC 4 cut(s) 1202, 1345, 1885, 2317
NsiI ATGCAT 2 cut(s) 1395, 2182
NspI RCATGY 1 cut(s) 1978
OliI CACNNNNGTG 1 cut(s) 536
PaeR7I CTCGAG 1 cut(s) 1455
PagI TCATGA 3 cut(s) 1011, 1063, 1294
PceI AGGCCT 2 cut(s) 1028, 1168
PctI GAATGC 1 cut(s) 2180
PdmI GAANNNNTTC 1 cut(s) 2300
PfeI GAWTC 3 cut(s) 689, 965, 2062
PflMI CCANNNNNTGG 1 cut(s) 1199
PinAI ACCGGT 1 cut(s) 1250
PkrI GCNGC 7 cut(s) 333, 479, 615, 1332, 1369, 1537, 1906
PleI GAGTC 4 cut(s) 1292, 1330, 1490, 2339
PpsI GAGTC 4 cut(s) 1292, 1330, 1490, 2339
PpuMI RGGWCCY 1 cut(s) 508
PshAI GACNNNNGTC 1 cut(s) 1740
PshBI ATTAAT 1 cut(s) 2226
PsiI TTATAA 2 cut(s) 243, 2171
Psp124BI GAGCTC 1 cut(s) 1527
Psp5II RGGWCCY 1 cut(s) 508
Psp6I CCWGG 5 cut(s) 221, 444, 1256, 1449, 1504
PspFI CCCAGC 2 cut(s) 97, 1239
PspGI CCWGG 5 cut(s) 221, 444, 1256, 1449, 1504
PspN4I GGNNCC 6 cut(s) 510, 958, 1111, 1255, 1614, 2145
PspPI GGNCC 3 cut(s) 508, 956, 1110
PspPPI RGGWCCY 1 cut(s) 508
PstI CTGCAG 1 cut(s) 482
PsuI RGATCY 3 cut(s) 1612, 1852, 1987
RsaI GTAC 3 cut(s) 217, 1514, 1925
RsaNI GTAC 3 cut(s) 216, 1513, 1924
RseI CAYNNNNRTG 5 cut(s) 243, 536, 1287, 2185, 2324
SacI GAGCTC 1 cut(s) 1527
SaqAI TTAA 8 cut(s) 699, 888, 912, 1470, 1695, 1749, 2204, 2226
SatI GCNGC 7 cut(s) 332, 478, 614, 1331, 1368, 1536, 1905
Sau96I GGNCC 3 cut(s) 508, 956, 1110
ScaI AGTACT 1 cut(s) 1514
SchI GAGTC 4 cut(s) 1292, 1330, 1491, 2340
ScrFI CCNGG 5 cut(s) 223, 446, 1258, 1451, 1506
SduI GDGCHC 4 cut(s) 39, 144, 1294, 1527
SfaNI GCATC 5 cut(s) 102, 1234, 1402, 1678, 2167
SfcI CTRYAG 2 cut(s) 478, 1617
Sfr274I CTCGAG 1 cut(s) 1455
SgrAI CRCCGGYG 1 cut(s) 1250
SinI GGWCC 2 cut(s) 508, 1110
SlaI CTCGAG 1 cut(s) 1455
SmiMI CAYNNNNRTG 5 cut(s) 243, 536, 1287, 2185, 2324
SmlI CTYRAG 2 cut(s) 635, 1455
SmoI CTYRAG 2 cut(s) 635, 1455
SseBI AGGCCT 2 cut(s) 1028, 1168
SsiI CCGC 2 cut(s) 1333, 1479
SspMI CTAG 7 cut(s) 435, 471, 764, 878, 908, 1740, 2213
SstI GAGCTC 1 cut(s) 1527
StuI AGGCCT 2 cut(s) 1028, 1168
StyD4I CCNGG 5 cut(s) 221, 444, 1256, 1449, 1504
StyI CCWWGG 5 cut(s) 470, 758, 1029, 1518, 1823
TaaI ACNGT 4 cut(s) 830, 1018, 2077, 2201
TaiI ACGT 2 cut(s) 63, 493
TaqI TCGA 5 cut(s) 171, 1456, 1966, 2102, 2184
TatI WGTACW 2 cut(s) 1512, 1923
TfiI GAWTC 3 cut(s) 689, 965, 2062
Tru1I TTAA 8 cut(s) 699, 888, 912, 1470, 1695, 1749, 2204, 2226
Tru9I TTAA 8 cut(s) 699, 888, 912, 1470, 1695, 1749, 2204, 2226
TscAI CASTG 8 cut(s) 505, 784, 930, 1153, 1331, 1706, 1914, 2082
TseFI GTSAC 4 cut(s) 1202, 1345, 1885, 2317
TseI GCWGC 7 cut(s) 331, 477, 613, 1330, 1367, 1535, 1904
Tsp45I GTSAC 4 cut(s) 1202, 1345, 1885, 2317
TspDTI ATGAA 8 cut(s) 218, 570, 681, 717, 870, 1000, 1818, 1850
TspRI CASTG 8 cut(s) 505, 784, 930, 1153, 1331, 1706, 1914, 2082
Van91I CCANNNNNTGG 1 cut(s) 1199
VpaK11BI GGWCC 2 cut(s) 508, 1110
VspI ATTAAT 1 cut(s) 2226
XagI CCTNNNNNAGG 1 cut(s) 469
XapI RAATTY 4 cut(s) 86, 337, 836, 860
XceI RCATGY 1 cut(s) 1978
XhoI CTCGAG 1 cut(s) 1455
XmaJI CCTAGG 1 cut(s) 470
XmiI GTMKAC 1 cut(s) 1430
XmnI GAANNNNTTC 1 cut(s) 2300
XspI CTAG 7 cut(s) 435, 471, 764, 878, 908, 1740, 2213
ZraI GACGTC 1 cut(s) 491
ZrmI AGTACT 1 cut(s) 1514
Zsp2I ATGCAT 2 cut(s) 1395, 2182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.