FvH4_5g26250

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
17707447 .. 17711908
4462 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g26250.t1

Sequence Viewer

Length: 2679 bp
ATGATGATCAATTCTCACCTGCAGAAACCTCCCTCCTCGTTGCCCTCCTCATTGTCATCTCCATTGCCGGTGACGAATACCAAAGATGGTATTCGTGCCACTGCCGCTGAGGTTGAAGCTCGAGCCATGATGAATACTATAACTTCATTAGCACAGAGTAATGAAGCAGTTACAGTGAAGGCTGTGGTCACTGTGAAACTAACAGCCGGAAGTATCATCTCCAACTTGTTTGGTTTGACAGCACCCCTCGATCTTTTCACTGATTTGCTCGGCAAAACCTTTCTTCTTGAGCTTGTCAGCGCCGAGCTTGACCCTAAAACTGGGTTGGAGAAGAAACCGATCCAGGGATATGCGCACAAAGTGAACAAGATCAATGACGAGGTGATGTACGAGAGTTCCTTCTCCGTCCCAGCCGGTTTTGGAGAGGTGGGGGCTGTTCTGTTTGAAAATCAGCACCACGAGGAGCTTTACATCAAAACCATACATTTACACATCAATGGCTTCCCAGATCCTTCTCCTGTTACTGTTACTTGTGATTCATGGGCTCACTCCAAGTATGTCAATCCAGACAAGAGAATCTTCTTCACCACCAAGTCTTACTTACCATCAGCGACACCAAGTGGATTGAAGAAGCTAAGAGAACTGGAGCTGCAATATTTGCGAGGAAATGGAGAGGGTGAAAGAGAAACATCAGACAGGATTTATGATTATGACACATACAATGATCTCGGAGATCCGGATAGTGATGATGGATTGGCCAGGCCTGTGCTCGGCGGCAAAGAGCACCCATACCCTAGGCGCTGCAGAACAGGACGGCCACGCACTGAAAAGGATCCACTATCGGAGCAGAGAAGCAGCAGTGTGTATGTACCAAGAGATGAAGCTTTTGCAGAGGTGAAACAAGTGACATTCGCGGCAAAGACCCTGAAATCGGTGCTGCACGCATTGCTTCCTCAGCTTGAGATGACACTGGTTAATCCAAACCTAGGGTTTCCCTACTTCACAGCCATAGATTCACTGTATAATGAAGGAGTCACAATGCCTAAGCCAAATGTTAGTGGGTTTTTTCAATCAATCATCCCAAGGCTAGTGAAGTCTGTTAGTAACAGCCAAGACGATCTTCTGCTCTTTGAGACACCTGAAATAATTGATCGTGACAAGTTTTCCTGGTTTAGAGACGAAGAATTTTCTCGGCAAACACTAGCTGGTCTTAATCCATTTAGCATACAGCTAGTCACGGAATGGCCATTGAAGAGTAAGCTTGACCCCGAGATATATGGTCCACCTGAATCATTGATCACCACAGAACTTGTGGAGAAAGAAGTCAGAGGTTGCATGACTGTCAAGGAGGCCATGAAAAGAAAGAAGATGTTCATTTTGGATTATCATGATCTGCTCTTGCCTTATGTGAGCAAAGTGAGAGAAATAGAAGGGACCACGCTGTATGGTTCTAGGACACTCTTCTTCCTCACTAGAGAAGAGACACTGAGGCCTATTGCCATTGAACTAACTCGTCCGCCTATCGGTGACAAGCCGCAATGGAAGCAAGTGTTTACTCCAACCTGGGATGCTACAGGATGCTGGCTGTGGAGAATTGCTAAAGCACATGTTTGTGCTCATGATGCTGGCTATCATCAGCTCGTCGTCCACTGGCTGAGGACTCATTGCTGCACAGAGCCATACATAATTGCTGCCAATCGCCAATTGAGTGCAATGCATCCCATCTATAGACTTCTACTTCCTCATTTTCGGTACACAATGGAAATCAATGCCCTCGCTCGAGAAAGTCTCATCAATGCAGGTGGAATCATCGAGAGCTCCTTCTCACCGGCAAAGTACTCCATTGAGCTCAGTTCAGCTGCTTATGACAAGTTTTGGCGCTTTGACATGGAAGCTTTGCCAGCAGATTTGATCAGAAGGGGAATGGCAGTTGAGGATCCCACCACTGAGCATGGCTTGAAGCTAACAATTAAAGATTACCCATTTGCAAATGATGGTCTCATTCTTTGGGATGCCATTAAGGAGTGGGTGAGTGACTATGTGAAACACTACTATCCAGACCCAGCTCTGGTTGAGAATGATCAAGAGCTTCAAGCATGGTGGACAGAAGTTAGAACCAAAGGCCATGCTGACAAAAAGGATGAGCCATGGTGGCCAGTTCTGAAAACCCAAGAAAACCTTACACAAGTTTTGACAACAATAATTTGGGTAACAGCTGGTCATCATGCAGCAGTAAACTTTGGCCAGTACATGTATGGGGGATACTTCCCAAATCGACCTACAATAGCTCGAACCAACATGCCAACTGAAGATCCATCTGAGGAGTTTTATCAAAACTTTTTGAAGAGGCCAGAATCTGCATTGCTAATGTGTTTCCCCTCACAAATTCAAGCAACCAAAATTATGGCTGTTTTAGACGTGTTGTCGAACCATTCACCGGATGAGGAGTATCTTGGGGAGATTATGGAGTCGTCTTGGGCTGAAAACCCTGTCATAAAAGCCACATTTGAGCGCTTCAATGGGAATCTGAAGAAGCTAGAAGGAATAATCGATGAAAGGAATACCGATACAAACCTTAAAAACAGAGTTGGAGCAGGAGTTATCCCGTATGAGCTTTTGAAGCCATTCTCAAAGCCAGGGGTCACAGGAATGGGAGTTCCTTATAGTATTTCAATTTGA

Protein Analysis

893

Amino Acids

100.93

Weight (kDa)

5.73

Isoelectric Point (pI)

39.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipoxygenase PF00305 208 - 875 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000211)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45140 AT3G45140
fragaria_vesca FvH4_3g43530 FvH4_3g43540 FvH4_3g43540 FvH4_5g05680 FvH4_5g26250 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00420 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440
malus_domestica MD02G1317800.v1.1 MD03G1021200.v1.1 MD07G1003600.v1.1 MD07G1003700.v1.1 MD07G1003900.v1.1 MD07G1004500.v1.1 MD11G1023100.v1.1
prunus_persica Prupe.2G005300_v2.0.a1 Prupe.2G005300_v2.0.a1 Prupe.2G005500_v2.0.a1 Prupe.2G005800_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1
pyrus_communis pycom02g26570 pycom02g26590 pycom02g26600 pycom07g00350 pycom11g01870
rosa_chinensis RchiOBHm_Chr1g0314111 RchiOBHm_Chr1g0314131 RchiOBHm_Chr1g0314151 RchiOBHm_Chr5g0078061 RchiOBHm_Chr5g0078091 RchiOBHm_Chr6g0285041 RchiOBHm_Chr6g0285051 RchiOBHm_Chr7g0216951
rosa_laevigata RLG00000002519 RLG00000002520 RLG00000002523 RLG00000002524 RLG00000002526 RLG00000012683 RLG00000030702 RLG00000030773 RLG00000030774 RLG00000030775 RLG00000036743 RLG00000036744 RLG00000036746 RLG00000036748
rosa_multiflora Rmu_co8050096.1_g000001 Rmu_co8091784.1_g000001 Rmu_co8342063.1_g000001 Rmu_co8353481.1_g000001 Rmu_co8390647.1_g000001 Rmu_sc0000670.1_g000032 Rmu_sc0000854.1_g000025 Rmu_sc0002478.1_g000009 Rmu_sc0004992.1_g000003 Rmu_sc0006851.1_g000003 Rmu_sc0009311.1_g000001 Rmu_sc0009311.1_g000005 Rmu_ssc0000154.1_g000036 Rmu_ssc0000154.1_g000041
rosa_roxburghii Rroxscaffold_1G00000310 Rroxscaffold_1G00000320 Rroxscaffold_1G00000330 Rroxscaffold_1G00000340 Rroxscaffold_1G00004130 Rroxscaffold_1G00004190 Rroxscaffold_3G00242690 Rroxscaffold_3G00242700 Rroxscaffold_3G00242710 Rroxscaffold_3G00242720 Rroxscaffold_3G00242740 Rroxscaffold_4G00332030 Rroxscaffold_4G00332050 Rroxscaffold_4G00332060 Rroxscaffold_6G00427990 Rroxscaffold_7G00183800 Rroxscaffold_7G00184080
rosa_rugosa Rorug01G0000100 Rorug01G0000200 Rorug01G0130400 Rorug05G0458200 Rorug05G0458300 Rorug05G0458400 Rorug06G0170200 Rorug07G0164500 RorugPtG0006300 RorugPtG0006400 RorugPtG0006500
rosa_samantha Rh1AG008700 Rh1AG008800 Rh1BG002100 Rh1BG002200 Rh1BG002700 Rh1BG012600 Rh1BG012900 Rh1BG120700 Rh1DG004500 Rh1DG004600 Rh1DG004700 Rh1DG004800 Rh1DG013000 Rh5BG535400 Rh5CG558800 Rh5DG547500 Rh5DG547600 Rh6AG281900 Rh6BG282500 Rh6CG284200 Rh6CG284300 Rh6CG284400 Rh6DG277500 Rh6DG277600 Rh7AG304700 Rh7BG296300 Rh7CG323200 Rh7CG323300 Rh7CG323400 Rh7CG323500 Rh7CG323800 Rh7DG304900
rosa_wichuraiana Rw1G000380 Rw1G000390 Rw1G000400 Rw5G047570 Rw5G047580 Rw6G024220 Rw7G025870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 27, 1790
Acc16I TGCGCA 1 cut(s) 354
Acc36I ACCTGC 2 cut(s) 27, 1790
AccII CGCG 1 cut(s) 914
AccIII TCCGGA 1 cut(s) 736
AciI CCGC 5 cut(s) 105, 774, 914, 1517, 1535
AclWI GGATC 8 cut(s) 334, 503, 728, 827, 840, 1931, 1944, 2306
AcoI YGGCCR 5 cut(s) 756, 815, 1244, 2153, 2242
AcsI RAATTY 2 cut(s) 1184, 2385
AcuI CTGAAG 2 cut(s) 2328, 2549
AdeI CACNNNGTG 2 cut(s) 361, 620
AfaI GTAC 5 cut(s) 389, 870, 1754, 1838, 2249
AfeI AGCGCT 1 cut(s) 2513
AfiI CCNNNNNNNGG 8 cut(s) 320, 344, 770, 931, 986, 1523, 2068, 2437
AflIII ACRYGT 3 cut(s) 1606, 2250, 2418
AhdI GACNNNNNGTC 1 cut(s) 2422
AjiI CACGTC 1 cut(s) 2419
AjnI CCWGG 5 cut(s) 342, 758, 1166, 1562, 2635
AjuI GAANNNNNNNTTGG 2 cut(s) 1104, 1136
AloI GAACNNNNNNTCC 2 cut(s) 2640, 2672
Alw21I GWGCWC 5 cut(s) 771, 786, 1618, 1820, 1851
Alw26I GTCTC 5 cut(s) 1127, 1170, 1475, 1793, 2003
AlwI GGATC 8 cut(s) 334, 503, 728, 827, 840, 1931, 1944, 2306
AlwNI CAGNNNCTG 1 cut(s) 2357
Ama87I CYCGRG 3 cut(s) 120, 1268, 1779
Aor13HI TCCGGA 1 cut(s) 736
Aor51HI AGCGCT 1 cut(s) 2513
ApeKI GCWGC 8 cut(s) 649, 801, 855, 937, 1668, 1691, 1859, 2228
ApoI RAATTY 2 cut(s) 1184, 2385
Asp700I GAANNNNTTC 2 cut(s) 1370, 2624
AspA2I CCTAGG 2 cut(s) 794, 985
AspLEI GCGC 5 cut(s) 302, 355, 801, 1881, 2514
AspS9I GGNCC 2 cut(s) 1280, 1434
AvaI CYCGRG 3 cut(s) 120, 1268, 1779
AvaII GGWCC 2 cut(s) 1280, 1434
AvrII CCTAGG 2 cut(s) 794, 985
BalI TGGCCA 4 cut(s) 758, 1246, 2155, 2244
BamHI GGATCC 2 cut(s) 832, 1936
BanII GRGCYC 3 cut(s) 547, 1820, 1851
BauI CACGAG 1 cut(s) 458
Bbv12I GWGCWC 5 cut(s) 771, 786, 1618, 1820, 1851
BbvCI CCTCAGC 3 cut(s) 108, 954, 1655
BbvI GCAGC 8 cut(s) 636, 788, 867, 924, 1655, 1678, 1846, 2240
BccI CCATC 6 cut(s) 80, 613, 743, 1730, 1988, 2323
BceAI ACGGC 1 cut(s) 830
BciT130I CCWGG 5 cut(s) 344, 760, 1168, 1564, 2637
BciVI GTATCC 1 cut(s) 2255
BclI TGATCA 4 cut(s) 6, 1296, 1911, 2080
BcoDI GTCTC 5 cut(s) 1127, 1170, 1475, 1793, 2003
BfaI CTAG 8 cut(s) 795, 986, 1088, 1202, 1232, 1452, 1473, 2537
BfmI CTRYAG 4 cut(s) 20, 802, 1572, 1726
BfoI RGCGCY 4 cut(s) 303, 802, 1882, 2515
BfuAI ACCTGC 2 cut(s) 27, 1790
BfuI GTATCC 1 cut(s) 2255
BglI GCCNNNNNGGC 1 cut(s) 2152
BlnI CCTAGG 2 cut(s) 794, 985
BmcAI AGTACT 1 cut(s) 1838
Bme1390I CCNGG 5 cut(s) 344, 760, 1168, 1564, 2637
Bme18I GGWCC 2 cut(s) 1280, 1434
BmeRI GACNNNNNGTC 1 cut(s) 2422
BmeT110I CYCGRG 3 cut(s) 120, 1268, 1779
BmgBI CACGTC 1 cut(s) 2419
BmgT120I GGNCC 2 cut(s) 1280, 1434
BmiI GGNNCC 3 cut(s) 834, 1435, 1938
BmrFI CCNGG 5 cut(s) 344, 760, 1168, 1564, 2637
BmrI ACTGGG 1 cut(s) 330
BmsI GCATC 5 cut(s) 1558, 1568, 1612, 1726, 2002
BmuI ACTGGG 1 cut(s) 330
BplI GAGNNNNNCTC 2 cut(s) 1773, 1805
BpmI CTGGAG 1 cut(s) 665
Bpu10I CCTNAGC 4 cut(s) 108, 954, 1044, 1655
BpuEI CTTGAG 2 cut(s) 308, 980
Bsa29I ATCGAT 1 cut(s) 2550
BsaI GGTCTC 1 cut(s) 2003
BsaJI CCNNGG 7 cut(s) 343, 794, 985, 1082, 1563, 2147, 2636
BsaWI WCCGGW 2 cut(s) 736, 2437
BsaXI ACNNNNNCTCC 2 cut(s) 2583, 2613
Bsc4I CCNNNNNNNGG 8 cut(s) 320, 344, 770, 931, 986, 1523, 2068, 2437
Bse118I RCCGGY 3 cut(s) 67, 413, 1828
Bse1I ACTGG 6 cut(s) 325, 648, 975, 1655, 2156, 2245
Bse3DI GCAATG 6 cut(s) 62, 944, 1544, 1663, 1719, 2360
BseAI TCCGGA 1 cut(s) 736
BseBI CCWGG 5 cut(s) 344, 760, 1168, 1564, 2637
BseCI ATCGAT 1 cut(s) 2550
BseDI CCNNGG 7 cut(s) 343, 794, 985, 1082, 1563, 2147, 2636
BseGI GGATG 7 cut(s) 1077, 1573, 1583, 1717, 2017, 2146, 2446
BseLI CCNNNNNNNGG 8 cut(s) 320, 344, 770, 931, 986, 1523, 2068, 2437
BseMI GCAATG 6 cut(s) 62, 944, 1544, 1663, 1719, 2360
BseMII CTCAG 7 cut(s) 99, 968, 1478, 1646, 1864, 1938, 2310
BseNI ACTGG 6 cut(s) 325, 648, 975, 1655, 2156, 2245
BseRI GAGGAG 5 cut(s) 25, 37, 476, 2336, 2459
BseXI GCAGC 8 cut(s) 636, 788, 867, 924, 1655, 1678, 1846, 2240
BseYI CCCAGC 2 cut(s) 409, 2062
BsgI GTGCAG 2 cut(s) 923, 1654
Bsh1236I CGCG 1 cut(s) 914
BshVI ATCGAT 1 cut(s) 2550
BsiHKAI GWGCWC 5 cut(s) 771, 786, 1618, 1820, 1851
BsiHKCI CYCGRG 3 cut(s) 120, 1268, 1779
BsiSI CCGG 6 cut(s) 68, 207, 414, 737, 1829, 2438
BslFI GGGAC 2 cut(s) 392, 1447
BslI CCNNNNNNNGG 8 cut(s) 320, 344, 770, 931, 986, 1523, 2068, 2437
BsmAI GTCTC 5 cut(s) 1127, 1170, 1475, 1793, 2003
BsmBI CGTCTC 1 cut(s) 1170
BsmFI GGGAC 2 cut(s) 392, 1447
Bso31I GGTCTC 1 cut(s) 2003
BsoBI CYCGRG 3 cut(s) 120, 1268, 1779
Bsp1286I GDGCHC 6 cut(s) 547, 771, 786, 1618, 1820, 1851
Bsp13I TCCGGA 1 cut(s) 736
Bsp19I CCATGG 1 cut(s) 2147
BspACI CCGC 5 cut(s) 105, 774, 914, 1517, 1535
BspCNI CTCAG 7 cut(s) 100, 967, 1479, 1647, 1863, 1939, 2311
BspDI ATCGAT 1 cut(s) 2550
BspEI TCCGGA 1 cut(s) 736
BspFNI CGCG 1 cut(s) 914
BspHI TCATGA 2 cut(s) 1387, 1618
BspLI GGNNCC 3 cut(s) 834, 1435, 1938
BspMAI CTGCAG 2 cut(s) 24, 806
BspMI ACCTGC 2 cut(s) 27, 1790
BspPI GGATC 8 cut(s) 334, 503, 728, 827, 840, 1931, 1944, 2306
BspTNI GGTCTC 1 cut(s) 2003
BsrDI GCAATG 6 cut(s) 62, 944, 1544, 1663, 1719, 2360
BsrFI RCCGGY 3 cut(s) 67, 413, 1828
BsrI ACTGG 6 cut(s) 325, 648, 975, 1655, 2156, 2245
BssAI RCCGGY 3 cut(s) 67, 413, 1828
BssECI CCNNGG 7 cut(s) 343, 794, 985, 1082, 1563, 2147, 2636
BssSI CACGAG 1 cut(s) 458
BssT1I CCWWGG 4 cut(s) 794, 985, 1082, 2147
Bst2BI CACGAG 1 cut(s) 458
Bst2UI CCWGG 5 cut(s) 344, 760, 1168, 1564, 2637
Bst4CI ACNGT 5 cut(s) 175, 193, 526, 1020, 1342
Bst6I CTCTTC 4 cut(s) 1247, 1466, 1473, 2339
BstAPI GCANNNNNTGC 2 cut(s) 658, 946
BstC8I GCNNGC 4 cut(s) 942, 1583, 1627, 1902
BstDEI CTNAG 9 cut(s) 108, 635, 954, 1044, 1487, 1655, 1850, 1947, 2319
BstDSI CCRYGG 1 cut(s) 2147
BstF5I GGATG 7 cut(s) 1077, 1573, 1583, 1717, 2017, 2146, 2446
BstFNI CGCG 1 cut(s) 914
BstH2I RGCGCY 4 cut(s) 303, 802, 1882, 2515
BstHHI GCGC 5 cut(s) 302, 355, 801, 1881, 2514
BstMAI GTCTC 5 cut(s) 1127, 1170, 1475, 1793, 2003
BstMWI GCNNNNNNNGC 9 cut(s) 104, 658, 946, 955, 1543, 1622, 1901, 2152, 2620
BstNI CCWGG 5 cut(s) 344, 760, 1168, 1564, 2637
BstNSI RCATGY 3 cut(s) 1610, 2254, 2302
BstSCI CCNGG 5 cut(s) 342, 758, 1166, 1562, 2635
BstSFI CTRYAG 4 cut(s) 20, 802, 1572, 1726
BstUI CGCG 1 cut(s) 914
BstV1I GCAGC 8 cut(s) 636, 788, 867, 924, 1655, 1678, 1846, 2240
BstX2I RGATCY 5 cut(s) 508, 733, 832, 1936, 2311
BstXI CCANNNNNNTGG 1 cut(s) 2404
BstYI RGATCY 5 cut(s) 508, 733, 832, 1936, 2311
Bsu15I ATCGAT 1 cut(s) 2550
BsuI GTATCC 1 cut(s) 2255
BsuTUI ATCGAT 1 cut(s) 2550
BtgI CCRYGG 1 cut(s) 2147
BtrI CACGTC 1 cut(s) 2419
BtsCI GGATG 7 cut(s) 1077, 1573, 1583, 1717, 2017, 2146, 2446
BtsI GCAGTG 2 cut(s) 99, 865
BveI ACCTGC 2 cut(s) 27, 1790
Cac8I GCNNGC 4 cut(s) 942, 1583, 1627, 1902
CaiI CAGNNNCTG 1 cut(s) 2357
CciI TCATGA 2 cut(s) 1387, 1618
CfoI GCGC 5 cut(s) 302, 355, 801, 1881, 2514
Cfr10I RCCGGY 3 cut(s) 67, 413, 1828
Cfr13I GGNCC 2 cut(s) 1280, 1434
ClaI ATCGAT 1 cut(s) 2550
Csp6I GTAC 5 cut(s) 388, 869, 1753, 1837, 2248
CspCI CAANNNNNGTGG 6 cut(s) 1291, 1326, 1783, 1818, 2081, 2116
CviQI GTAC 5 cut(s) 388, 869, 1753, 1837, 2248
DdeI CTNAG 9 cut(s) 108, 635, 954, 1044, 1487, 1655, 1850, 1947, 2319
DraIII CACNNNGTG 2 cut(s) 361, 620
DriI GACNNNNNGTC 1 cut(s) 2422
EaeI YGGCCR 5 cut(s) 756, 815, 1244, 2153, 2242
Eam1104I CTCTTC 4 cut(s) 1247, 1466, 1473, 2339
Eam1105I GACNNNNNGTC 1 cut(s) 2422
EarI CTCTTC 4 cut(s) 1247, 1466, 1473, 2339
EciI GGCGGA 1 cut(s) 1506
Ecl136II GAGCTC 2 cut(s) 1818, 1849
Eco130I CCWWGG 4 cut(s) 794, 985, 1082, 2147
Eco147I AGGCCT 2 cut(s) 763, 1492
Eco24I GRGCYC 3 cut(s) 547, 1820, 1851
Eco31I GGTCTC 1 cut(s) 2003
Eco47I GGWCC 2 cut(s) 1280, 1434
Eco47III AGCGCT 1 cut(s) 2513
Eco53kI GAGCTC 2 cut(s) 1818, 1849
Eco57I CTGAAG 2 cut(s) 2328, 2549
Eco88I CYCGRG 3 cut(s) 120, 1268, 1779
EcoICRI GAGCTC 2 cut(s) 1818, 1849
EcoRII CCWGG 5 cut(s) 342, 758, 1166, 1562, 2635
EcoT14I CCWWGG 4 cut(s) 794, 985, 1082, 2147
EcoT22I ATGCAT 1 cut(s) 1719
EcoT38I GRGCYC 3 cut(s) 547, 1820, 1851
ErhI CCWWGG 4 cut(s) 794, 985, 1082, 2147
Esp3I CGTCTC 1 cut(s) 1170
FalI AAGNNNNNCTT 8 cut(s) 563, 595, 584, 616, 1104, 1136, 2163, 2195
FaqI GGGAC 2 cut(s) 392, 1447
FbaI TGATCA 4 cut(s) 6, 1296, 1911, 2080
FokI GGATG 7 cut(s) 1064, 1580, 1590, 1704, 2024, 2153, 2453
FriOI GRGCYC 3 cut(s) 547, 1820, 1851
FspAI RTGCGCAY 1 cut(s) 354
FspBI CTAG 8 cut(s) 795, 986, 1088, 1202, 1232, 1452, 1473, 2537
FspI TGCGCA 1 cut(s) 354
GlaI GCGC 5 cut(s) 301, 354, 800, 1880, 2513
GsaI CCCAGC 2 cut(s) 413, 2066
GsuI CTGGAG 1 cut(s) 665
HaeII RGCGCY 4 cut(s) 303, 802, 1882, 2515
HapII CCGG 6 cut(s) 68, 207, 414, 737, 1829, 2438
HhaI GCGC 5 cut(s) 302, 355, 801, 1881, 2514
Hin6I GCGC 5 cut(s) 300, 353, 799, 1879, 2512
HinP1I GCGC 5 cut(s) 300, 353, 799, 1879, 2512
HindIII AAGCTT 3 cut(s) 882, 1259, 1893
HpaII CCGG 6 cut(s) 68, 207, 414, 737, 1829, 2438
Hpy166II GTNNAC 7 cut(s) 364, 1283, 1554, 1648, 1755, 2103, 2236
Hpy188I TCNGA 8 cut(s) 694, 731, 844, 1328, 1916, 2163, 2320, 2529
Hpy8I GTNNAC 7 cut(s) 364, 1283, 1554, 1648, 1755, 2103, 2236
Hpy99I CGWCG 1 cut(s) 1646
HpyAV CCTTC 8 cut(s) 172, 409, 522, 1022, 1424, 1831, 1911, 2534
HpyCH4III ACNGT 5 cut(s) 175, 193, 526, 1020, 1342
HpyCH4IV ACGT 1 cut(s) 2418
HpyF10VI GCNNNNNNNGC 9 cut(s) 104, 658, 946, 955, 1543, 1622, 1901, 2152, 2620
HpyF3I CTNAG 9 cut(s) 108, 635, 954, 1044, 1487, 1655, 1850, 1947, 2319
HpySE526I ACGT 1 cut(s) 2418
HspAI GCGC 5 cut(s) 300, 353, 799, 1879, 2512
Kpn2I TCCGGA 1 cut(s) 736
Ksp22I TGATCA 4 cut(s) 6, 1296, 1911, 2080
LmnI GCTCC 5 cut(s) 463, 646, 844, 1823, 2591
Lsp1109I GCAGC 8 cut(s) 636, 788, 867, 924, 1655, 1678, 1846, 2240
LweI GCATC 5 cut(s) 1558, 1568, 1612, 1726, 2002
MaeI CTAG 8 cut(s) 795, 986, 1088, 1202, 1232, 1452, 1473, 2537
MaeII ACGT 1 cut(s) 2418
MfeI CAATTG 1 cut(s) 1703
MflI RGATCY 5 cut(s) 508, 733, 832, 1936, 2311
MhlI GDGCHC 6 cut(s) 547, 771, 786, 1618, 1820, 1851
MlsI TGGCCA 4 cut(s) 758, 1246, 2155, 2244
MluNI TGGCCA 4 cut(s) 758, 1246, 2155, 2244
MlyI GAGTC 3 cut(s) 1041, 1654, 2477
MmeI TCCRAC 4 cut(s) 246, 306, 1583, 2569
Mox20I TGGCCA 4 cut(s) 758, 1246, 2155, 2244
Mph1103I ATGCAT 1 cut(s) 1719
MroI TCCGGA 1 cut(s) 736
MroXI GAANNNNTTC 2 cut(s) 1370, 2624
MscI TGGCCA 4 cut(s) 758, 1246, 2155, 2244
MseI TTAA 5 cut(s) 975, 1212, 1971, 2019, 2577
MslI CAYNNNNRTG 3 cut(s) 495, 1611, 2648
Msp20I TGGCCA 4 cut(s) 758, 1246, 2155, 2244
MspA1I CMGCKG 3 cut(s) 107, 1859, 2216
MspI CCGG 6 cut(s) 68, 207, 414, 737, 1829, 2438
MspR9I CCNGG 5 cut(s) 344, 760, 1168, 1564, 2637
MunI CAATTG 1 cut(s) 1703
MvaI CCWGG 5 cut(s) 344, 760, 1168, 1564, 2637
MvnI CGCG 1 cut(s) 914
MwoI GCNNNNNNNGC 9 cut(s) 104, 658, 946, 955, 1543, 1622, 1901, 2152, 2620
NcoI CCATGG 1 cut(s) 2147
NlaIV GGNNCC 3 cut(s) 834, 1435, 1938
NmeAIII GCCGAG 4 cut(s) 249, 328, 750, 1171
NmuCI GTSAC 9 cut(s) 70, 187, 904, 1033, 1154, 1234, 1526, 2033, 2641
NsbI TGCGCA 1 cut(s) 354
NsiI ATGCAT 1 cut(s) 1719
NspI RCATGY 3 cut(s) 1610, 2254, 2302
PaeR7I CTCGAG 2 cut(s) 120, 1779
PagI TCATGA 2 cut(s) 1387, 1618
PaqCI CACCTGC 2 cut(s) 27, 1790
PceI AGGCCT 2 cut(s) 763, 1492
PciI ACATGT 2 cut(s) 1606, 2250
PdmI GAANNNNTTC 2 cut(s) 1370, 2624
PfeI GAWTC 7 cut(s) 536, 576, 1013, 1289, 1806, 2354, 2524
PleI GAGTC 3 cut(s) 1040, 1654, 2476
PpsI GAGTC 3 cut(s) 1040, 1654, 2476
PscI ACATGT 2 cut(s) 1606, 2250
Psp124BI GAGCTC 2 cut(s) 1820, 1851
Psp6I CCWGG 5 cut(s) 342, 758, 1166, 1562, 2635
PspFI CCCAGC 2 cut(s) 409, 2062
PspGI CCWGG 5 cut(s) 342, 758, 1166, 1562, 2635
PspN4I GGNNCC 3 cut(s) 834, 1435, 1938
PspPI GGNCC 2 cut(s) 1280, 1434
PspXI VCTCGAGB 1 cut(s) 120
PstI CTGCAG 2 cut(s) 24, 806
PstNI CAGNNNCTG 1 cut(s) 2357
PsuI RGATCY 5 cut(s) 508, 733, 832, 1936, 2311
PvuII CAGCTG 2 cut(s) 1859, 2216
RsaI GTAC 5 cut(s) 389, 870, 1754, 1838, 2249
RsaNI GTAC 5 cut(s) 388, 869, 1753, 1837, 2248
RseI CAYNNNNRTG 3 cut(s) 495, 1611, 2648
SacI GAGCTC 2 cut(s) 1820, 1851
SaqAI TTAA 5 cut(s) 975, 1212, 1971, 2019, 2577
Sau96I GGNCC 2 cut(s) 1280, 1434
ScaI AGTACT 1 cut(s) 1838
SchI GAGTC 3 cut(s) 1041, 1654, 2477
ScrFI CCNGG 5 cut(s) 344, 760, 1168, 1564, 2637
SduI GDGCHC 6 cut(s) 547, 771, 786, 1618, 1820, 1851
SfaNI GCATC 5 cut(s) 1558, 1568, 1612, 1726, 2002
SfcI CTRYAG 4 cut(s) 20, 802, 1572, 1726
Sfr274I CTCGAG 2 cut(s) 120, 1779
SinI GGWCC 2 cut(s) 1280, 1434
SlaI CTCGAG 2 cut(s) 120, 1779
SmiMI CAYNNNNRTG 3 cut(s) 495, 1611, 2648
SmlI CTYRAG 4 cut(s) 120, 287, 959, 1779
SmoI CTYRAG 4 cut(s) 120, 287, 959, 1779
SseBI AGGCCT 2 cut(s) 763, 1492
SsiI CCGC 5 cut(s) 105, 774, 914, 1517, 1535
SspI AATATT 1 cut(s) 656
SspMI CTAG 8 cut(s) 795, 986, 1088, 1202, 1232, 1452, 1473, 2537
SstI GAGCTC 2 cut(s) 1820, 1851
StuI AGGCCT 2 cut(s) 763, 1492
StyD4I CCNGG 5 cut(s) 342, 758, 1166, 1562, 2635
StyI CCWWGG 4 cut(s) 794, 985, 1082, 2147
TaaI ACNGT 5 cut(s) 175, 193, 526, 1020, 1342
TaiI ACGT 1 cut(s) 2421
TaqI TCGA 8 cut(s) 121, 249, 1780, 1812, 2275, 2290, 2426, 2550
TatI WGTACW 2 cut(s) 1836, 2247
TauI GCSGC 4 cut(s) 107, 777, 917, 1537
TfiI GAWTC 7 cut(s) 536, 576, 1013, 1289, 1806, 2354, 2524
Tru1I TTAA 5 cut(s) 975, 1212, 1971, 2019, 2577
Tru9I TTAA 5 cut(s) 975, 1212, 1971, 2019, 2577
TseFI GTSAC 9 cut(s) 70, 187, 904, 1033, 1154, 1234, 1526, 2033, 2641
TseI GCWGC 8 cut(s) 649, 801, 855, 937, 1668, 1691, 1859, 2228
Tsp45I GTSAC 9 cut(s) 70, 187, 904, 1033, 1154, 1234, 1526, 2033, 2641
TspDTI ATGAA 9 cut(s) 135, 146, 177, 528, 894, 1041, 1363, 1370, 2568
TspGWI ACGGA 2 cut(s) 394, 1253
VpaK11BI GGWCC 2 cut(s) 1280, 1434
XapI RAATTY 2 cut(s) 1184, 2385
XceI RCATGY 3 cut(s) 1610, 2254, 2302
XcmI CCANNNNNNNNNTGG 2 cut(s) 1309, 2252
XhoI CTCGAG 2 cut(s) 120, 1779
XmaJI CCTAGG 2 cut(s) 794, 985
XmnI GAANNNNTTC 2 cut(s) 1370, 2624
XspI CTAG 8 cut(s) 795, 986, 1088, 1202, 1232, 1452, 1473, 2537
ZrmI AGTACT 1 cut(s) 1838
Zsp2I ATGCAT 1 cut(s) 1719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.