Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 956, 2693 |
| AccB1I | GGYRCC | 1 cut(s) | 1679 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 968 |
| AccBSI | CCGCTC | 1 cut(s) | 2710 |
| AccII | CGCG | 3 cut(s) | 861, 2672, 2846 |
| AclWI | GGATC | 8 cut(s) | 144, 157, 512, 736, 749, 1457, 1470, 1654 |
| AcoI | YGGCCR | 4 cut(s) | 478, 868, 1442, 1695 |
| AcsI | RAATTY | 3 cut(s) | 1358, 1382, 2583 |
| AcuI | CTGAAG | 2 cut(s) | 29, 2700 |
| AfaI | GTAC | 9 cut(s) | 193, 202, 720, 1067, 1130, 1152, 1617, 2271, 2648 |
| AfeI | AGCGCT | 1 cut(s) | 508 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 527, 551, 580, 968, 996, 1724, 1779, 2206, 2565 |
| AflIII | ACRYGT | 2 cut(s) | 1470, 2670 |
| AgeI | ACCGGT | 1 cut(s) | 1772 |
| AgsI | TTSAA | 8 cut(s) | 7, 1225, 1450, 2012, 2588, 2738, 2776, 2818 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2620 |
| AhlI | ACTAGT | 3 cut(s) | 203, 224, 1288 |
| AjiI | CACGTC | 2 cut(s) | 1206, 1471 |
| AjnI | CCWGG | 4 cut(s) | 693, 995, 2345, 2833 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 761, 793, 1263, 1295, 1442, 1474 |
| AleI | CACNNNNGTG | 1 cut(s) | 287 |
| Alw21I | GWGCWC | 1 cut(s) | 2289 |
| Alw26I | GTCTC | 8 cut(s) | 39, 435, 593, 1071, 1347, 1412, 2233, 2322 |
| AlwI | GGATC | 8 cut(s) | 144, 157, 512, 736, 749, 1457, 1470, 1654 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1490, 2834 |
| Ama87I | CYCGRG | 1 cut(s) | 447 |
| Aor51HI | AGCGCT | 1 cut(s) | 508 |
| AoxI | GGCC | 7 cut(s) | 478, 868, 1442, 1548, 1688, 1695, 2351 |
| ApeKI | GCWGC | 7 cut(s) | 78, 216, 219, 320, 1056, 2426, 2555 |
| ApoI | RAATTY | 3 cut(s) | 1358, 1382, 2583 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1367, 1399, 1791, 1823 |
| AsiGI | ACCGGT | 1 cut(s) | 1772 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1568, 2035 |
| AspLEI | GCGC | 3 cut(s) | 509, 861, 882 |
| AspS9I | GGNCC | 4 cut(s) | 245, 1478, 2134, 2509 |
| AvaI | CYCGRG | 1 cut(s) | 447 |
| AvaII | GGWCC | 4 cut(s) | 245, 1478, 2134, 2509 |
| AxyI | CCTNAGG | 1 cut(s) | 1685 |
| BaeGI | GKGCMC | 2 cut(s) | 1335, 2502 |
| BalI | TGGCCA | 4 cut(s) | 480, 870, 1444, 1697 |
| BamHI | GGATCC | 3 cut(s) | 149, 741, 1462 |
| BanI | GGYRCC | 1 cut(s) | 1679 |
| BanII | GRGCYC | 1 cut(s) | 2289 |
| BauI | CACGAG | 1 cut(s) | 1977 |
| BbsI | GAAGAC | 2 cut(s) | 769, 2688 |
| Bbv12I | GWGCWC | 1 cut(s) | 2289 |
| BbvI | GCAGC | 7 cut(s) | 90, 228, 231, 332, 1068, 2438, 2542 |
| BccI | CCATC | 7 cut(s) | 692, 811, 1178, 1547, 1839, 2186, 2656 |
| BceAI | ACGGC | 2 cut(s) | 40, 167 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1367, 1401, 1482, 1516 |
| BciT130I | CCWGG | 4 cut(s) | 695, 997, 2347, 2835 |
| BclI | TGATCA | 1 cut(s) | 2278 |
| BcoDI | GTCTC | 8 cut(s) | 39, 435, 593, 1071, 1347, 1412, 2233, 2322 |
| BcuI | ACTAGT | 3 cut(s) | 203, 224, 1288 |
| BfmI | CTRYAG | 1 cut(s) | 2251 |
| BfoI | RGCGCY | 1 cut(s) | 510 |
| BmcAI | AGTACT | 2 cut(s) | 193, 202 |
| Bme1390I | CCNGG | 4 cut(s) | 695, 997, 2347, 2835 |
| Bme18I | GGWCC | 4 cut(s) | 245, 1478, 2134, 2509 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2620 |
| BmeT110I | CYCGRG | 1 cut(s) | 447 |
| BmgBI | CACGTC | 2 cut(s) | 1206, 1471 |
| BmgT120I | GGNCC | 4 cut(s) | 245, 1478, 2134, 2509 |
| BmiI | GGNNCC | 9 cut(s) | 151, 543, 640, 743, 1464, 1480, 1681, 2136, 2511 |
| BmrFI | CCNGG | 4 cut(s) | 695, 997, 2347, 2835 |
| BmrI | ACTGGG | 1 cut(s) | 1020 |
| BmsI | GCATC | 7 cut(s) | 307, 663, 670, 685, 1945, 2013, 2200 |
| BmuI | ACTGGG | 1 cut(s) | 1020 |
| BpiI | GAAGAC | 2 cut(s) | 769, 2688 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2036, 2068 |
| BpmI | CTGGAG | 2 cut(s) | 1181, 1329 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2067 |
| BpuEI | CTTGAG | 2 cut(s) | 665, 2355 |
| Bsa29I | ATCGAT | 1 cut(s) | 2165 |
| BsaAI | YACGTR | 1 cut(s) | 1606 |
| BsaI | GGTCTC | 2 cut(s) | 1412, 2233 |
| BsaWI | WCCGGW | 2 cut(s) | 1772, 2414 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1302, 1332, 2657, 2687, 2781, 2811 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 527, 551, 580, 968, 996, 1724, 1779, 2206, 2565 |
| Bse118I | RCCGGY | 3 cut(s) | 1403, 1772, 1997 |
| Bse1I | ACTGG | 7 cut(s) | 153, 303, 532, 545, 1015, 1164, 1853 |
| Bse21I | CCTNAGG | 1 cut(s) | 1685 |
| Bse3DI | GCAATG | 3 cut(s) | 854, 871, 2481 |
| BseBI | CCWGG | 4 cut(s) | 695, 997, 2347, 2835 |
| BseCI | ATCGAT | 1 cut(s) | 2165 |
| BseGI | GGATG | 6 cut(s) | 60, 703, 1936, 2215, 2385, 2411 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 527, 551, 580, 968, 996, 1724, 1779, 2206, 2565 |
| BseMI | GCAATG | 3 cut(s) | 854, 871, 2481 |
| BseMII | CTCAG | 6 cut(s) | 276, 739, 1104, 1748, 1895, 2147 |
| BseNI | ACTGG | 7 cut(s) | 153, 303, 532, 545, 1015, 1164, 1853 |
| BseRI | GAGGAG | 4 cut(s) | 713, 857, 2189, 2657 |
| BseSI | GKGCMC | 2 cut(s) | 1335, 2502 |
| BseXI | GCAGC | 7 cut(s) | 90, 228, 231, 332, 1068, 2438, 2542 |
| BseYI | CCCAGC | 2 cut(s) | 1757, 2792 |
| Bsh1236I | CGCG | 3 cut(s) | 861, 2672, 2846 |
| Bsh1285I | CGRYCG | 2 cut(s) | 327, 1715 |
| BshFI | GGCC | 7 cut(s) | 480, 870, 1444, 1550, 1690, 1697, 2353 |
| BshNI | GGYRCC | 1 cut(s) | 1679 |
| BshTI | ACCGGT | 1 cut(s) | 1772 |
| BshVI | ATCGAT | 1 cut(s) | 2165 |
| BsiEI | CGRYCG | 2 cut(s) | 327, 1715 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2289 |
| BsiHKCI | CYCGRG | 1 cut(s) | 447 |
| BsiSI | CCGG | 5 cut(s) | 1404, 1773, 1998, 2415, 2636 |
| BslFI | GGGAC | 2 cut(s) | 1388, 1464 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 527, 551, 580, 968, 996, 1724, 1779, 2206, 2565 |
| BsmAI | GTCTC | 8 cut(s) | 39, 435, 593, 1071, 1347, 1412, 2233, 2322 |
| BsmBI | CGTCTC | 1 cut(s) | 1071 |
| BsmFI | GGGAC | 2 cut(s) | 1388, 1464 |
| BsmI | GAATGC | 1 cut(s) | 1771 |
| BsnI | GGCC | 7 cut(s) | 480, 870, 1444, 1550, 1690, 1697, 2353 |
| Bso31I | GGTCTC | 2 cut(s) | 1412, 2233 |
| BsoBI | CYCGRG | 1 cut(s) | 447 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1335, 2289, 2502 |
| Bsp1407I | TGTACA | 1 cut(s) | 2269 |
| Bsp19I | CCATGG | 2 cut(s) | 64, 2040 |
| BspANI | GGCC | 7 cut(s) | 480, 870, 1444, 1550, 1690, 1697, 2353 |
| BspCNI | CTCAG | 6 cut(s) | 277, 738, 1103, 1747, 1896, 2148 |
| BspDI | ATCGAT | 1 cut(s) | 2165 |
| BspFNI | CGCG | 3 cut(s) | 861, 2672, 2846 |
| BspHI | TCATGA | 2 cut(s) | 1816, 2538 |
| BspLI | GGNNCC | 9 cut(s) | 151, 543, 640, 743, 1464, 1480, 1681, 2136, 2511 |
| BspPI | GGATC | 8 cut(s) | 144, 157, 512, 736, 749, 1457, 1470, 1654 |
| BspQI | GCTCTTC | 1 cut(s) | 494 |
| BspT107I | GGYRCC | 1 cut(s) | 1679 |
| BspTNI | GGTCTC | 2 cut(s) | 1412, 2233 |
| BsrBI | CCGCTC | 1 cut(s) | 2710 |
| BsrDI | GCAATG | 3 cut(s) | 854, 871, 2481 |
| BsrFI | RCCGGY | 3 cut(s) | 1403, 1772, 1997 |
| BsrGI | TGTACA | 1 cut(s) | 2269 |
| BsrI | ACTGG | 7 cut(s) | 153, 303, 532, 545, 1015, 1164, 1853 |
| BssAI | RCCGGY | 3 cut(s) | 1403, 1772, 1997 |
| BssSI | CACGAG | 1 cut(s) | 1977 |
| BssT1I | CCWWGG | 4 cut(s) | 64, 241, 871, 2040 |
| Bst2BI | CACGAG | 1 cut(s) | 1977 |
| Bst2UI | CCWGG | 4 cut(s) | 695, 997, 2347, 2835 |
| Bst4CI | ACNGT | 7 cut(s) | 33, 403, 415, 1155, 2153, 2223, 2317 |
| Bst6I | CTCTTC | 3 cut(s) | 494, 834, 1445 |
| BstAUI | TGTACA | 1 cut(s) | 2269 |
| BstBAI | YACGTR | 1 cut(s) | 1606 |
| BstC8I | GCNNGC | 5 cut(s) | 704, 1143, 1695, 1746, 2458 |
| BstDSI | CCRYGG | 4 cut(s) | 64, 2040, 2149, 2502 |
| BstEII | GGTNACC | 3 cut(s) | 1826, 2417, 2839 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 994 |
| BstF5I | GGATG | 6 cut(s) | 60, 703, 1936, 2215, 2385, 2411 |
| BstFNI | CGCG | 3 cut(s) | 861, 2672, 2846 |
| BstH2I | RGCGCY | 1 cut(s) | 510 |
| BstHHI | GCGC | 3 cut(s) | 509, 861, 882 |
| BstMAI | GTCTC | 8 cut(s) | 39, 435, 593, 1071, 1347, 1412, 2233, 2322 |
| BstMCI | CGRYCG | 2 cut(s) | 327, 1715 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 216, 867, 1330, 1858, 2099, 2731, 2809, 2818 |
| BstNI | CCWGG | 4 cut(s) | 695, 997, 2347, 2835 |
| BstNSI | RCATGY | 1 cut(s) | 1145 |
| BstPI | GGTNACC | 3 cut(s) | 1826, 2417, 2839 |
| BstSCI | CCNGG | 4 cut(s) | 693, 995, 2345, 2833 |
| BstSFI | CTRYAG | 1 cut(s) | 2251 |
| BstSLI | GKGCMC | 2 cut(s) | 1335, 2502 |
| BstUI | CGCG | 3 cut(s) | 861, 2672, 2846 |
| BstV1I | GCAGC | 7 cut(s) | 90, 228, 231, 332, 1068, 2438, 2542 |
| BstV2I | GAAGAC | 2 cut(s) | 769, 2688 |
| BstX2I | RGATCY | 3 cut(s) | 149, 741, 1462 |
| BstYI | RGATCY | 3 cut(s) | 149, 741, 1462 |
| Bsu15I | ATCGAT | 1 cut(s) | 2165 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1685 |
| BsuRI | GGCC | 7 cut(s) | 480, 870, 1444, 1550, 1690, 1697, 2353 |
| BsuTUI | ATCGAT | 1 cut(s) | 2165 |
| BtgI | CCRYGG | 4 cut(s) | 64, 2040, 2149, 2502 |
| BtgZI | GCGATG | 1 cut(s) | 1015 |
| BtrI | CACGTC | 2 cut(s) | 1206, 1471 |
| BtsCI | GGATG | 6 cut(s) | 60, 703, 1936, 2215, 2385, 2411 |
| BtsIMutI | CAGTG | 7 cut(s) | 282, 388, 1157, 1173, 1742, 1846, 2228 |
| Cac8I | GCNNGC | 5 cut(s) | 704, 1143, 1695, 1746, 2458 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1490, 2834 |
| CciI | TCATGA | 2 cut(s) | 1816, 2538 |
| CfoI | GCGC | 3 cut(s) | 509, 861, 882 |
| Cfr10I | RCCGGY | 3 cut(s) | 1403, 1772, 1997 |
| Cfr13I | GGNCC | 4 cut(s) | 245, 1478, 2134, 2509 |
| ClaI | ATCGAT | 1 cut(s) | 2165 |
| CseI | GACGC | 2 cut(s) | 415, 2678 |
| Csp6I | GTAC | 9 cut(s) | 192, 201, 719, 1066, 1129, 1151, 1616, 2270, 2647 |
| CspAI | ACCGGT | 1 cut(s) | 1772 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1981, 2016, 2279, 2314 |
| CviQI | GTAC | 9 cut(s) | 192, 201, 719, 1066, 1129, 1151, 1616, 2270, 2647 |
| DraI | TTTAAA | 1 cut(s) | 610 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2620 |
| EaeI | YGGCCR | 4 cut(s) | 478, 868, 1442, 1695 |
| Eam1104I | CTCTTC | 3 cut(s) | 494, 834, 1445 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2620 |
| EarI | CTCTTC | 3 cut(s) | 494, 834, 1445 |
| Ecl136II | GAGCTC | 1 cut(s) | 2287 |
| Eco130I | CCWWGG | 4 cut(s) | 64, 241, 871, 2040 |
| Eco24I | GRGCYC | 1 cut(s) | 2289 |
| Eco31I | GGTCTC | 2 cut(s) | 1412, 2233 |
| Eco47I | GGWCC | 4 cut(s) | 245, 1478, 2134, 2509 |
| Eco47III | AGCGCT | 1 cut(s) | 508 |
| Eco53kI | GAGCTC | 1 cut(s) | 2287 |
| Eco57I | CTGAAG | 2 cut(s) | 29, 2700 |
| Eco81I | CCTNAGG | 1 cut(s) | 1685 |
| Eco88I | CYCGRG | 1 cut(s) | 447 |
| Eco91I | GGTNACC | 3 cut(s) | 1826, 2417, 2839 |
| EcoICRI | GAGCTC | 1 cut(s) | 2287 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 994 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2134, 2509 |
| EcoO65I | GGTNACC | 3 cut(s) | 1826, 2417, 2839 |
| EcoRII | CCWGG | 4 cut(s) | 693, 995, 2345, 2833 |
| EcoT14I | CCWWGG | 4 cut(s) | 64, 241, 871, 2040 |
| EcoT22I | ATGCAT | 2 cut(s) | 678, 1143 |
| EcoT38I | GRGCYC | 1 cut(s) | 2289 |
| ErhI | CCWWGG | 4 cut(s) | 64, 241, 871, 2040 |
| Esp3I | CGTCTC | 1 cut(s) | 1071 |
| FaqI | GGGAC | 2 cut(s) | 1388, 1464 |
| FbaI | TGATCA | 1 cut(s) | 2278 |
| FokI | GGATG | 6 cut(s) | 47, 710, 1923, 2222, 2372, 2398 |
| FriOI | GRGCYC | 1 cut(s) | 2289 |
| GlaI | GCGC | 3 cut(s) | 508, 860, 881 |
| GsaI | CCCAGC | 2 cut(s) | 1761, 2796 |
| GsuI | CTGGAG | 2 cut(s) | 1181, 1329 |
| HaeII | RGCGCY | 1 cut(s) | 510 |
| HaeIII | GGCC | 7 cut(s) | 480, 870, 1444, 1550, 1690, 1697, 2353 |
| HapII | CCGG | 5 cut(s) | 1404, 1773, 1998, 2415, 2636 |
| HgaI | GACGC | 2 cut(s) | 415, 2678 |
| HhaI | GCGC | 3 cut(s) | 509, 861, 882 |
| Hin6I | GCGC | 3 cut(s) | 507, 859, 880 |
| HinP1I | GCGC | 3 cut(s) | 507, 859, 880 |
| HincII | GTYRAC | 4 cut(s) | 1107, 1707, 1901, 2434 |
| HindII | GTYRAC | 4 cut(s) | 1107, 1707, 1901, 2434 |
| HindIII | AAGCTT | 2 cut(s) | 950, 1083 |
| HpaI | GTTAAC | 1 cut(s) | 1107 |
| HpaII | CCGG | 5 cut(s) | 1404, 1773, 1998, 2415, 2636 |
| Hpy166II | GTNNAC | 9 cut(s) | 916, 1066, 1107, 1203, 1707, 1901, 2262, 2301, 2434 |
| Hpy188I | TCNGA | 9 cut(s) | 48, 1045, 1093, 1504, 1949, 2157, 2233, 2312, 2830 |
| Hpy8I | GTNNAC | 9 cut(s) | 916, 1066, 1107, 1203, 1707, 1901, 2262, 2301, 2434 |
| Hpy99I | CGWCG | 3 cut(s) | 253, 1472, 2690 |
| HpyCH4III | ACNGT | 7 cut(s) | 33, 403, 415, 1155, 2153, 2223, 2317 |
| HpyCH4IV | ACGT | 5 cut(s) | 1068, 1205, 1470, 1605, 2688 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 216, 867, 1330, 1858, 2099, 2731, 2809, 2818 |
| HpySE526I | ACGT | 5 cut(s) | 1068, 1205, 1470, 1605, 2688 |
| HspAI | GCGC | 3 cut(s) | 507, 859, 880 |
| Ksp22I | TGATCA | 1 cut(s) | 2278 |
| KspAI | GTTAAC | 1 cut(s) | 1107 |
| LguI | GCTCTTC | 1 cut(s) | 494 |
| LmnI | GCTCC | 9 cut(s) | 496, 541, 638, 844, 1053, 2044, 2149, 2292, 2789 |
| Lsp1109I | GCAGC | 7 cut(s) | 90, 228, 231, 332, 1068, 2438, 2542 |
| LweI | GCATC | 7 cut(s) | 307, 663, 670, 685, 1945, 2013, 2200 |
| MaeII | ACGT | 5 cut(s) | 1068, 1205, 1470, 1605, 2688 |
| MbiI | CCGCTC | 1 cut(s) | 2710 |
| MflI | RGATCY | 3 cut(s) | 149, 741, 1462 |
| MhlI | GDGCHC | 3 cut(s) | 1335, 2289, 2502 |
| MlsI | TGGCCA | 4 cut(s) | 480, 870, 1444, 1697 |
| MluI | ACGCGT | 1 cut(s) | 2670 |
| MluNI | TGGCCA | 4 cut(s) | 480, 870, 1444, 1697 |
| MlyI | GAGTC | 6 cut(s) | 952, 1390, 1702, 1814, 2190, 2267 |
| MmeI | TCCRAC | 2 cut(s) | 127, 1777 |
| Mox20I | TGGCCA | 4 cut(s) | 480, 870, 1444, 1697 |
| Mph1103I | ATGCAT | 2 cut(s) | 678, 1143 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1568, 2035 |
| MscI | TGGCCA | 4 cut(s) | 480, 870, 1444, 1697 |
| MslI | CAYNNNNRTG | 2 cut(s) | 287, 401 |
| Msp20I | TGGCCA | 4 cut(s) | 480, 870, 1444, 1697 |
| MspA1I | CMGCKG | 3 cut(s) | 323, 1693, 1761 |
| MspI | CCGG | 5 cut(s) | 1404, 1773, 1998, 2415, 2636 |
| MspR9I | CCNGG | 4 cut(s) | 695, 997, 2347, 2835 |
| Mva1269I | GAATGC | 1 cut(s) | 1771 |
| MvaI | CCWGG | 4 cut(s) | 695, 997, 2347, 2835 |
| MvnI | CGCG | 3 cut(s) | 861, 2672, 2846 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 216, 867, 1330, 1858, 2099, 2731, 2809, 2818 |
| NcoI | CCATGG | 2 cut(s) | 64, 2040 |
| NlaIV | GGNNCC | 9 cut(s) | 151, 543, 640, 743, 1464, 1480, 1681, 2136, 2511 |
| NsiI | ATGCAT | 2 cut(s) | 678, 1143 |
| NspI | RCATGY | 1 cut(s) | 1145 |
| OliI | CACNNNNGTG | 1 cut(s) | 287 |
| PaeI | GCATGC | 1 cut(s) | 1145 |
| PaeR7I | CTCGAG | 1 cut(s) | 447 |
| PagI | TCATGA | 2 cut(s) | 1816, 2538 |
| PciSI | GCTCTTC | 1 cut(s) | 494 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1012 |
| PctI | GAATGC | 1 cut(s) | 1771 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1568, 2035 |
| PfeI | GAWTC | 8 cut(s) | 931, 938, 1191, 1264, 1487, 1982, 2079, 2167 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 968 |
| PfoI | TCCNGGA | 1 cut(s) | 693 |
| PinAI | ACCGGT | 1 cut(s) | 1772 |
| PleI | GAGTC | 6 cut(s) | 951, 1390, 1702, 1814, 2190, 2266 |
| PpsI | GAGTC | 6 cut(s) | 951, 1390, 1702, 1814, 2190, 2266 |
| Ppu21I | YACGTR | 1 cut(s) | 1606 |
| PpuMI | RGGWCCY | 2 cut(s) | 2134, 2509 |
| PsiI | TTATAA | 2 cut(s) | 956, 2693 |
| Psp124BI | GAGCTC | 1 cut(s) | 2289 |
| Psp5II | RGGWCCY | 2 cut(s) | 2134, 2509 |
| Psp6I | CCWGG | 4 cut(s) | 693, 995, 2345, 2833 |
| PspEI | GGTNACC | 3 cut(s) | 1826, 2417, 2839 |
| PspFI | CCCAGC | 2 cut(s) | 1757, 2792 |
| PspGI | CCWGG | 4 cut(s) | 693, 995, 2345, 2833 |
| PspN4I | GGNNCC | 9 cut(s) | 151, 543, 640, 743, 1464, 1480, 1681, 2136, 2511 |
| PspPI | GGNCC | 4 cut(s) | 245, 1478, 2134, 2509 |
| PspPPI | RGGWCCY | 2 cut(s) | 2134, 2509 |
| PspXI | VCTCGAGB | 1 cut(s) | 447 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1490, 2834 |
| PsuI | RGATCY | 3 cut(s) | 149, 741, 1462 |
| PvuII | CAGCTG | 1 cut(s) | 1761 |
| RsaI | GTAC | 9 cut(s) | 193, 202, 720, 1067, 1130, 1152, 1617, 2271, 2648 |
| RsaNI | GTAC | 9 cut(s) | 192, 201, 719, 1066, 1129, 1151, 1616, 2270, 2647 |
| RseI | CAYNNNNRTG | 2 cut(s) | 287, 401 |
| SacI | GAGCTC | 1 cut(s) | 2289 |
| SapI | GCTCTTC | 1 cut(s) | 494 |
| Sau96I | GGNCC | 4 cut(s) | 245, 1478, 2134, 2509 |
| ScaI | AGTACT | 2 cut(s) | 193, 202 |
| SchI | GAGTC | 6 cut(s) | 952, 1390, 1702, 1814, 2190, 2267 |
| ScrFI | CCNGG | 4 cut(s) | 695, 997, 2347, 2835 |
| SduI | GDGCHC | 3 cut(s) | 1335, 2289, 2502 |
| SfaNI | GCATC | 7 cut(s) | 307, 663, 670, 685, 1945, 2013, 2200 |
| SfcI | CTRYAG | 1 cut(s) | 2251 |
| Sfr274I | CTCGAG | 1 cut(s) | 447 |
| SinI | GGWCC | 4 cut(s) | 245, 1478, 2134, 2509 |
| SlaI | CTCGAG | 1 cut(s) | 447 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 287, 401 |
| SmlI | CTYRAG | 3 cut(s) | 447, 680, 2370 |
| SmoI | CTYRAG | 3 cut(s) | 447, 680, 2370 |
| SpeI | ACTAGT | 3 cut(s) | 203, 224, 1288 |
| SphI | GCATGC | 1 cut(s) | 1145 |
| SspI | AATATT | 1 cut(s) | 2036 |
| SstI | GAGCTC | 1 cut(s) | 2289 |
| StyD4I | CCNGG | 4 cut(s) | 693, 995, 2345, 2833 |
| StyI | CCWWGG | 4 cut(s) | 64, 241, 871, 2040 |
| TaaI | ACNGT | 7 cut(s) | 33, 403, 415, 1155, 2153, 2223, 2317 |
| TaiI | ACGT | 5 cut(s) | 1071, 1208, 1473, 1608, 2691 |
| TaqII | GACCGA | 1 cut(s) | 262 |
| TatI | WGTACW | 5 cut(s) | 191, 200, 718, 2269, 2646 |
| TauI | GCSGC | 3 cut(s) | 864, 1693, 2702 |
| TfiI | GAWTC | 8 cut(s) | 931, 938, 1191, 1264, 1487, 1982, 2079, 2167 |
| TscAI | CASTG | 7 cut(s) | 289, 388, 1164, 1180, 1742, 1853, 2228 |
| TseI | GCWGC | 7 cut(s) | 78, 216, 219, 320, 1056, 2426, 2555 |
| TspGWI | ACGGA | 6 cut(s) | 85, 308, 320, 1451, 2340, 2519 |
| TspRI | CASTG | 7 cut(s) | 289, 388, 1164, 1180, 1742, 1853, 2228 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 968 |
| VpaK11BI | GGWCC | 4 cut(s) | 245, 1478, 2134, 2509 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 994 |
| XapI | RAATTY | 3 cut(s) | 1358, 1382, 2583 |
| XceI | RCATGY | 1 cut(s) | 1145 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2599 |
| XhoI | CTCGAG | 1 cut(s) | 447 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1568, 2035 |
| ZrmI | AGTACT | 2 cut(s) | 193, 202 |
| Zsp2I | ATGCAT | 2 cut(s) | 678, 1143 |