FvH4_5g05680

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
3365502 .. 3368891
3390 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g05680.t1

Sequence Viewer

Length: 2304 bp
ATGTATTTTATCTTACAAACAGAGACTGGATTGGAGAAAGAAACAATAAAGGGGTATGCGGACAAAGTGACTCAAAAAGAGACGATTGTGACGTACGAGAGTGTGCTGACTATCCCGCCAGGTTTTGGGGATATCGGAGCGGTTCAGGTTGAGAATGAGCACCAGAAGGAGGCTTACATCAAGAATATCGAGCTCACCGGATTCCCAGATGGTACTTCCTGTTACATACCATCGAAGACACCAAGCGGGATCAAGAGGCTAAGAGAAGAGGAGCTGCAACTTCTGCGAGGAAATGGGGAGGGTGAGCGAAAAGCATCTGAAAGGATTTACGATTATGATACATACAATGATCTTGGAGACCCGGATAGCAAAGACGAGTTGGCCAGGCCTGTCCTCGGTGGCAAAGAGCACCCGTACCCTAGGCGCTGCAGAACTGGACGACCGCGCACTAAAAAGGATCCATTATCTGAGGAAAGAAGCAGCAGCGTATATGTACCAAGAGATGAAGCGTTTGCAGAGTTGAAACAGCTCACTTTCTCTGCAAATACCCTGAAATATGTGCTGCCCGCATTGCTTTATCAGCTTGAGATAACACTTGTTGATCCAAAGCTAGGATTTCCCTACTTCACAGCCATAGATTCATTGTTCAACGAAGGAATCACATTGCCTGAGCCAAAATCGAGTGGCTTTTTTCGGTCATTCATCCAAAGGCTAATGAAGGGTATCAGCAATGGACAAGATGATCTCTTGCTCTTTGAGACCCCTGAAATAATTGATCGTGATAAATTTTCTTGGCTCAAAGATGAAGAGTTTTCTCGGCAAACTCTAGCTGGTCTCAATCCATATAGCATAGGGCTAGTTACAGAATGGCCTTTGAAAAGTAAACTTGACCCCGAGATTTATGGCAAAGCTGAATCATTGATCACCACAGAACTTGTGGAGAAGGAAATCAGAGGCTGTATGACTGTCGATGAGGCGTTAAAAAGAAAGAAGCTCTTTATTTTGGATTATCATGATCTGCTCATGCCTTATGTAAACAAAGTGAGAGAGGTTGAAGGAACTACACTGTATGGTTCTCGAACACTATTCTTCCTCACAGAGAATGGTATACTGATGCCTATTGCCATTGAACTCACTCGACCACCTATTGATGACAAGCCCCAATGGAAGGATGTGTTTACCCCAACCTGGGATGCAACTGGTTGCTGGCTGTGGAGGCTTGCCAAAGCCCATGTTTGTGCTCATGATGCTGGCTTTCATCAACTTGTCATCCACTGGCTGAGGACTCATTGTTGTACAGAACCATACATAATTGCAGCAAATAGACAACTAAGTGCAATGCATCCCATCTATAGGCTTTTACATCCTCATTTTAGGTATACAATGGAAATCAACGCTTTGGCTCGACAAAGCCTCATCAATGCAGGTGGAATCATTGAGACCTGCTTCTCACCAGCCAAGTACTCAATTGAGCTCAGTTCTGCTGCTTATGACCAGCTTTGGCGCTTCGACATGGAAGCTTTGCCTGCAGATCTAATTAGAAGGGGAATGGCAGTTGAGGATCCTACAGCTGAGCATGGTGTGAAGCTAACAATTGAAGACTACCCATTTGCAAATGATGGTCTCATTCTGTGGGATGCCATTAAAGAGTGGGTGGCTGACTATGTGAACCACTATTATCCAGACCCAGCTCTTGTGGATTCTGATAACGAGCTTCAAGAATGGTGGACAGAAGTTAGAACCAAGGGCCATGCAGACAAAAAAGATGAACCATGGTGGCCTGTTTTAAAAACCCCAAAAGATCTCATTCATATTTTGACAACTATAATTTGGGTTACAGCGGGACATCATGCTGCAGTGAACTTTGGCCAGTACACGTATGCCGGATACTTCCCGAACCGGCCCACAATAGCCCGAAGTAACATGCCAACTGAAGATGCAAACGAAGATCGTTTCAAGATATTTATGAAGAAACCAGAAGCTGCATTGCTGAGGTGCTTCCCTTCTCAGATTCAGGCAACAAAAGTGATGGCTGTCTTGCACGTGTTATCGAACCATTCACCAGACGAGGAGTACATTGGTGAGACTGTGGAGTCGTCTTGGGCTGAAAACCCTGTGATAAATGCAGCTTTCGAGAGGTTCAATGGTAACTTGAAGAAGCTAGAAGGAATAATTGATGAGAGGAACACCAATATGGAACTGAAAAACAGAGTTGGAGCAGGGGTTGTTCCATATGAGCTTCTGAAGCCATTCTCTAGACCAGGGGTCACAGGAAAGGGAGTTCCCAACAGCATCTCCATCTAA

Protein Analysis

768

Amino Acids

87.44

Weight (kDa)

5.46

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipoxygenase PF00305 83 - 750 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000211)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45140 AT3G45140
fragaria_vesca FvH4_3g43530 FvH4_3g43540 FvH4_3g43540 FvH4_5g05680 FvH4_5g26250 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00420 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440
malus_domestica MD02G1317800.v1.1 MD03G1021200.v1.1 MD07G1003600.v1.1 MD07G1003700.v1.1 MD07G1003900.v1.1 MD07G1004500.v1.1 MD11G1023100.v1.1
prunus_persica Prupe.2G005300_v2.0.a1 Prupe.2G005300_v2.0.a1 Prupe.2G005500_v2.0.a1 Prupe.2G005800_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1
pyrus_communis pycom02g26570 pycom02g26590 pycom02g26600 pycom07g00350 pycom11g01870
rosa_chinensis RchiOBHm_Chr1g0314111 RchiOBHm_Chr1g0314131 RchiOBHm_Chr1g0314151 RchiOBHm_Chr5g0078061 RchiOBHm_Chr5g0078091 RchiOBHm_Chr6g0285041 RchiOBHm_Chr6g0285051 RchiOBHm_Chr7g0216951
rosa_laevigata RLG00000002519 RLG00000002520 RLG00000002523 RLG00000002524 RLG00000002526 RLG00000012683 RLG00000030702 RLG00000030773 RLG00000030774 RLG00000030775 RLG00000036743 RLG00000036744 RLG00000036746 RLG00000036748
rosa_multiflora Rmu_co8050096.1_g000001 Rmu_co8091784.1_g000001 Rmu_co8342063.1_g000001 Rmu_co8353481.1_g000001 Rmu_co8390647.1_g000001 Rmu_sc0000670.1_g000032 Rmu_sc0000854.1_g000025 Rmu_sc0002478.1_g000009 Rmu_sc0004992.1_g000003 Rmu_sc0006851.1_g000003 Rmu_sc0009311.1_g000001 Rmu_sc0009311.1_g000005 Rmu_ssc0000154.1_g000036 Rmu_ssc0000154.1_g000041
rosa_roxburghii Rroxscaffold_1G00000310 Rroxscaffold_1G00000320 Rroxscaffold_1G00000330 Rroxscaffold_1G00000340 Rroxscaffold_1G00004130 Rroxscaffold_1G00004190 Rroxscaffold_3G00242690 Rroxscaffold_3G00242700 Rroxscaffold_3G00242710 Rroxscaffold_3G00242720 Rroxscaffold_3G00242740 Rroxscaffold_4G00332030 Rroxscaffold_4G00332050 Rroxscaffold_4G00332060 Rroxscaffold_6G00427990 Rroxscaffold_7G00183800 Rroxscaffold_7G00184080
rosa_rugosa Rorug01G0000100 Rorug01G0000200 Rorug01G0130400 Rorug05G0458200 Rorug05G0458300 Rorug05G0458400 Rorug06G0170200 Rorug07G0164500 RorugPtG0006300 RorugPtG0006400 RorugPtG0006500
rosa_samantha Rh1AG008700 Rh1AG008800 Rh1BG002100 Rh1BG002200 Rh1BG002700 Rh1BG012600 Rh1BG012900 Rh1BG120700 Rh1DG004500 Rh1DG004600 Rh1DG004700 Rh1DG004800 Rh1DG013000 Rh5BG535400 Rh5CG558800 Rh5DG547500 Rh5DG547600 Rh6AG281900 Rh6BG282500 Rh6CG284200 Rh6CG284300 Rh6CG284400 Rh6DG277500 Rh6DG277600 Rh7AG304700 Rh7BG296300 Rh7CG323200 Rh7CG323300 Rh7CG323400 Rh7CG323500 Rh7CG323800 Rh7DG304900
rosa_wichuraiana Rw1G000380 Rw1G000390 Rw1G000400 Rw5G047570 Rw5G047580 Rw6G024220 Rw7G025870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1415
AasI GACNNNNNNGTC 1 cut(s) 2092
Acc36I ACCTGC 2 cut(s) 1415, 1451
AccB7I CCANNNNNTGG 1 cut(s) 125
AccBSI CCGCTC 1 cut(s) 140
AccI GTMKAC 2 cut(s) 1108, 1379
AccII CGCG 1 cut(s) 445
AciI CCGC 7 cut(s) 59, 116, 140, 246, 443, 567, 1841
AclWI GGATC 6 cut(s) 257, 452, 465, 596, 1556, 1569
AcoI YGGCCR 2 cut(s) 381, 1867
AcsI RAATTY 1 cut(s) 785
AcuI CTGAAG 2 cut(s) 1953, 2264
AcvI CACGTG 1 cut(s) 2044
AfaI GTAC 8 cut(s) 95, 214, 416, 495, 1297, 1463, 1874, 2075
AfiI CCNNNNNNNGG 8 cut(s) 125, 169, 395, 611, 1168, 1188, 1189, 1353
AflIII ACRYGT 2 cut(s) 1875, 2043
AhdI GACNNNNNGTC 1 cut(s) 2264
AjnI CCWGG 4 cut(s) 118, 383, 1187, 2260
AloI GAACNNNNNNTCC 2 cut(s) 2265, 2297
Alw21I GWGCWC 5 cut(s) 162, 195, 411, 1243, 1476
Alw26I GTCTC 8 cut(s) 17, 74, 351, 752, 839, 1433, 1628, 2078
AlwI GGATC 6 cut(s) 257, 452, 465, 596, 1556, 1569
AlwNI CAGNNNCTG 3 cut(s) 26, 957, 1982
Ama87I CYCGRG 1 cut(s) 893
AoxI GGCC 7 cut(s) 381, 386, 869, 1747, 1778, 1867, 1901
ApoI RAATTY 1 cut(s) 785
ArsI GACNNNNNNTTYG 2 cut(s) 1592, 1624
Asp700I GAANNNNTTC 1 cut(s) 2249
AspA2I CCTAGG 1 cut(s) 419
AspLEI GCGC 3 cut(s) 426, 447, 1506
AspS9I GGNCC 2 cut(s) 1747, 1902
AsuC2I CCSGG 1 cut(s) 362
AsuHPI GGTGA 6 cut(s) 187, 314, 916, 1443, 2052, 2093
AvaI CYCGRG 1 cut(s) 893
AvrII CCTAGG 1 cut(s) 419
BalI TGGCCA 2 cut(s) 383, 1869
BamHI GGATCC 2 cut(s) 457, 1561
BanII GRGCYC 2 cut(s) 195, 1476
BarI GAAGNNNNNNTAC 2 cut(s) 158, 190
BbrPI CACGTG 1 cut(s) 2044
BbsI GAAGAC 2 cut(s) 242, 1605
Bbv12I GWGCWC 5 cut(s) 162, 195, 411, 1243, 1476
BbvCI CCTCAGC 2 cut(s) 1280, 1991
BccI CCATC 5 cut(s) 203, 238, 1355, 1613, 2023
BciT130I CCWGG 4 cut(s) 120, 385, 1189, 2262
BciVI GTATCC 1 cut(s) 1880
BclI TGATCA 1 cut(s) 921
BcnI CCSGG 1 cut(s) 362
BcoDI GTCTC 8 cut(s) 17, 74, 351, 752, 839, 1433, 1628, 2078
BfaI CTAG 6 cut(s) 420, 611, 827, 857, 2162, 2256
BfmI CTRYAG 5 cut(s) 427, 1351, 1527, 1566, 1854
BfoI RGCGCY 2 cut(s) 427, 1507
BfuAI ACCTGC 2 cut(s) 1415, 1451
BfuI GTATCC 1 cut(s) 1880
BglII AGATCT 2 cut(s) 1531, 1801
BlnI CCTAGG 1 cut(s) 419
BlpI GCTNAGC 1 cut(s) 1572
BmcAI AGTACT 1 cut(s) 1463
Bme1390I CCNGG 5 cut(s) 120, 362, 385, 1189, 2262
BmeRI GACNNNNNGTC 1 cut(s) 2264
BmeT110I CYCGRG 1 cut(s) 893
BmgT120I GGNCC 2 cut(s) 1747, 1902
BmiI GGNNCC 2 cut(s) 459, 1563
BmrFI CCNGG 5 cut(s) 120, 362, 385, 1189, 2262
BmsI GCATC 7 cut(s) 323, 1104, 1183, 1237, 1351, 1627, 1927
BpiI GAAGAC 2 cut(s) 242, 1605
Bpu10I CCTNAGC 3 cut(s) 669, 1280, 1991
Bpu1102I GCTNAGC 1 cut(s) 1572
BpuEI CTTGAG 1 cut(s) 605
BpuMI CCSGG 1 cut(s) 362
BsaAI YACGTR 2 cut(s) 1878, 2044
BsaI GGTCTC 5 cut(s) 351, 752, 839, 1433, 1628
BsaJI CCNNGG 6 cut(s) 394, 419, 1188, 1743, 1772, 2261
BsaWI WCCGGW 1 cut(s) 197
BsaXI ACNNNNNCTCC 3 cut(s) 2208, 2238, 2279
Bsc4I CCNNNNNNNGG 8 cut(s) 125, 169, 395, 611, 1168, 1188, 1189, 1353
Bse118I RCCGGY 1 cut(s) 1899
Bse1I ACTGG 5 cut(s) 31, 439, 1204, 1280, 1870
Bse3DI GCAATG 5 cut(s) 569, 662, 736, 1344, 1985
BseBI CCWGG 4 cut(s) 120, 385, 1189, 2262
BseDI CCNNGG 6 cut(s) 394, 419, 1188, 1743, 1772, 2261
BseGI GGATG 7 cut(s) 702, 1177, 1198, 1269, 1342, 1363, 1642
BseLI CCNNNNNNNGG 8 cut(s) 125, 169, 395, 611, 1168, 1188, 1189, 1353
BseMI GCAATG 5 cut(s) 569, 662, 736, 1344, 1985
BseMII CTCAG 7 cut(s) 459, 660, 1271, 1489, 1563, 1982, 2021
BseNI ACTGG 5 cut(s) 31, 439, 1204, 1280, 1870
BseRI GAGGAG 2 cut(s) 284, 2084
BseYI CCCAGC 1 cut(s) 1687
Bsh1236I CGCG 1 cut(s) 445
Bsh1285I CGRYCG 1 cut(s) 443
BshFI GGCC 7 cut(s) 383, 388, 871, 1749, 1780, 1869, 1903
BsiEI CGRYCG 1 cut(s) 443
BsiHKAI GWGCWC 5 cut(s) 162, 195, 411, 1243, 1476
BsiHKCI CYCGRG 1 cut(s) 893
BsiSI CCGG 4 cut(s) 198, 362, 1884, 1900
BsiWI CGTACG 1 cut(s) 93
BslFI GGGAC 1 cut(s) 1857
BslI CCNNNNNNNGG 8 cut(s) 125, 169, 395, 611, 1168, 1188, 1189, 1353
BsmAI GTCTC 8 cut(s) 17, 74, 351, 752, 839, 1433, 1628, 2078
BsmBI CGTCTC 1 cut(s) 74
BsmFI GGGAC 1 cut(s) 1857
BsnI GGCC 7 cut(s) 383, 388, 871, 1749, 1780, 1869, 1903
Bso31I GGTCTC 5 cut(s) 351, 752, 839, 1433, 1628
BsoBI CYCGRG 1 cut(s) 893
Bsp1286I GDGCHC 5 cut(s) 162, 195, 411, 1243, 1476
Bsp1407I TGTACA 1 cut(s) 1295
Bsp1720I GCTNAGC 1 cut(s) 1572
Bsp19I CCATGG 1 cut(s) 1772
BspACI CCGC 7 cut(s) 59, 116, 140, 246, 443, 567, 1841
BspANI GGCC 7 cut(s) 383, 388, 871, 1749, 1780, 1869, 1903
BspCNI CTCAG 7 cut(s) 460, 661, 1272, 1488, 1564, 1983, 2020
BspFNI CGCG 1 cut(s) 445
BspHI TCATGA 2 cut(s) 1012, 1243
BspLI GGNNCC 2 cut(s) 459, 1563
BspMAI CTGCAG 3 cut(s) 431, 1531, 1858
BspMI ACCTGC 2 cut(s) 1415, 1451
BspPI GGATC 6 cut(s) 257, 452, 465, 596, 1556, 1569
BspTNI GGTCTC 5 cut(s) 351, 752, 839, 1433, 1628
BsrBI CCGCTC 1 cut(s) 140
BsrDI GCAATG 5 cut(s) 569, 662, 736, 1344, 1985
BsrFI RCCGGY 1 cut(s) 1899
BsrGI TGTACA 1 cut(s) 1295
BsrI ACTGG 5 cut(s) 31, 439, 1204, 1280, 1870
BssAI RCCGGY 1 cut(s) 1899
BssECI CCNNGG 6 cut(s) 394, 419, 1188, 1743, 1772, 2261
BssNAI GTATAC 2 cut(s) 1109, 1380
BssT1I CCWWGG 3 cut(s) 419, 1743, 1772
Bst1107I GTATAC 2 cut(s) 1109, 1380
Bst2UI CCWGG 4 cut(s) 120, 385, 1189, 2262
Bst4CI ACNGT 3 cut(s) 967, 1068, 2089
Bst6I CTCTTC 2 cut(s) 261, 801
BstAPI GCANNNNNTGC 1 cut(s) 283
BstAUI TGTACA 1 cut(s) 1295
BstBAI YACGTR 2 cut(s) 1878, 2044
BstC8I GCNNGC 5 cut(s) 567, 1208, 1221, 1252, 1527
BstDEI CTNAG 9 cut(s) 260, 468, 669, 1280, 1331, 1475, 1572, 1991, 2007
BstDSI CCRYGG 1 cut(s) 1772
BstF5I GGATG 7 cut(s) 702, 1177, 1198, 1269, 1342, 1363, 1642
BstFNI CGCG 1 cut(s) 445
BstH2I RGCGCY 2 cut(s) 427, 1507
BstHHI GCGC 3 cut(s) 426, 447, 1506
BstMAI GTCTC 8 cut(s) 17, 74, 351, 752, 839, 1433, 1628, 2078
BstMCI CGRYCG 1 cut(s) 443
BstMWI GCNNNNNNNGC 7 cut(s) 283, 571, 580, 1216, 1247, 1526, 2245
BstNI CCWGG 4 cut(s) 120, 385, 1189, 2262
BstNSI RCATGY 1 cut(s) 1927
BstSCI CCNGG 5 cut(s) 118, 360, 383, 1187, 2260
BstSFI CTRYAG 5 cut(s) 427, 1351, 1527, 1566, 1854
BstUI CGCG 1 cut(s) 445
BstV2I GAAGAC 2 cut(s) 242, 1605
BstX2I RGATCY 4 cut(s) 457, 1531, 1561, 1801
BstYI RGATCY 4 cut(s) 457, 1531, 1561, 1801
BstZ17I GTATAC 2 cut(s) 1109, 1380
BsuI GTATCC 1 cut(s) 1880
BsuRI GGCC 7 cut(s) 383, 388, 871, 1749, 1780, 1869, 1903
BtgI CCRYGG 1 cut(s) 1772
BtsCI GGATG 7 cut(s) 702, 1177, 1198, 1269, 1342, 1363, 1642
BtsI GCAGTG 1 cut(s) 1863
BtsIMutI CAGTG 3 cut(s) 1064, 1273, 1863
BveI ACCTGC 2 cut(s) 1415, 1451
Cac8I GCNNGC 5 cut(s) 567, 1208, 1221, 1252, 1527
CaiI CAGNNNCTG 3 cut(s) 26, 957, 1982
CciI TCATGA 2 cut(s) 1012, 1243
CfoI GCGC 3 cut(s) 426, 447, 1506
Cfr10I RCCGGY 1 cut(s) 1899
Cfr13I GGNCC 2 cut(s) 1747, 1902
Csp6I GTAC 8 cut(s) 94, 213, 415, 494, 1296, 1462, 1873, 2074
CspCI CAANNNNNGTGG 6 cut(s) 916, 951, 1408, 1443, 1706, 1741
CviQI GTAC 8 cut(s) 94, 213, 415, 494, 1296, 1462, 1873, 2074
DdeI CTNAG 9 cut(s) 260, 468, 669, 1280, 1331, 1475, 1572, 1991, 2007
DraI TTTAAA 1 cut(s) 1788
DrdI GACNNNNNNGTC 1 cut(s) 2092
DriI GACNNNNNGTC 1 cut(s) 2264
DseDI GACNNNNNNGTC 1 cut(s) 2092
EaeI YGGCCR 2 cut(s) 381, 1867
Eam1104I CTCTTC 2 cut(s) 261, 801
Eam1105I GACNNNNNGTC 1 cut(s) 2264
EarI CTCTTC 2 cut(s) 261, 801
Ecl136II GAGCTC 2 cut(s) 193, 1474
Eco130I CCWWGG 3 cut(s) 419, 1743, 1772
Eco147I AGGCCT 1 cut(s) 388
Eco24I GRGCYC 2 cut(s) 195, 1476
Eco31I GGTCTC 5 cut(s) 351, 752, 839, 1433, 1628
Eco32I GATATC 1 cut(s) 133
Eco53kI GAGCTC 2 cut(s) 193, 1474
Eco57I CTGAAG 2 cut(s) 1953, 2264
Eco72I CACGTG 1 cut(s) 2044
Eco88I CYCGRG 1 cut(s) 893
EcoICRI GAGCTC 2 cut(s) 193, 1474
EcoRII CCWGG 4 cut(s) 118, 383, 1187, 2260
EcoRV GATATC 1 cut(s) 133
EcoT14I CCWWGG 3 cut(s) 419, 1743, 1772
EcoT22I ATGCAT 1 cut(s) 1344
EcoT38I GRGCYC 2 cut(s) 195, 1476
ErhI CCWWGG 3 cut(s) 419, 1743, 1772
Esp3I CGTCTC 1 cut(s) 74
FalI AAGNNNNNCTT 2 cut(s) 980, 1012
FaqI GGGAC 1 cut(s) 1857
FauI CCCGC 4 cut(s) 123, 239, 574, 1834
FauNDI CATATG 1 cut(s) 2233
FbaI TGATCA 1 cut(s) 921
FblI GTMKAC 2 cut(s) 1108, 1379
FokI GGATG 7 cut(s) 689, 1184, 1205, 1256, 1329, 1350, 1649
FriOI GRGCYC 2 cut(s) 195, 1476
FspBI CTAG 6 cut(s) 420, 611, 827, 857, 2162, 2256
GlaI GCGC 3 cut(s) 425, 446, 1505
GsaI CCCAGC 1 cut(s) 1691
HaeII RGCGCY 2 cut(s) 427, 1507
HaeIII GGCC 7 cut(s) 383, 388, 871, 1749, 1780, 1869, 1903
HapII CCGG 4 cut(s) 198, 362, 1884, 1900
HhaI GCGC 3 cut(s) 426, 447, 1506
Hin6I GCGC 3 cut(s) 424, 445, 1504
HinP1I GCGC 3 cut(s) 424, 445, 1504
HindIII AAGCTT 1 cut(s) 1518
HpaII CCGG 4 cut(s) 198, 362, 1884, 1900
HphI GGTGA 6 cut(s) 187, 314, 916, 1443, 2052, 2093
Hpy166II GTNNAC 9 cut(s) 884, 1036, 1109, 1179, 1380, 1669, 1728, 1861, 1875
Hpy188I TCNGA 7 cut(s) 137, 319, 469, 953, 1705, 2010, 2244
Hpy8I GTNNAC 9 cut(s) 884, 1036, 1109, 1179, 1380, 1669, 1728, 1861, 1875
HpyAV CCTTC 9 cut(s) 160, 647, 712, 937, 1049, 1162, 1536, 2013, 2159
HpyCH4III ACNGT 3 cut(s) 967, 1068, 2089
HpyCH4IV ACGT 3 cut(s) 92, 1877, 2043
HpyF10VI GCNNNNNNNGC 7 cut(s) 283, 571, 580, 1216, 1247, 1526, 2245
HpyF3I CTNAG 9 cut(s) 260, 468, 669, 1280, 1331, 1475, 1572, 1991, 2007
HpySE526I ACGT 3 cut(s) 92, 1877, 2043
HspAI GCGC 3 cut(s) 424, 445, 1504
Ksp22I TGATCA 1 cut(s) 921
LmnI GCTCC 3 cut(s) 137, 271, 2216
LweI GCATC 7 cut(s) 323, 1104, 1183, 1237, 1351, 1627, 1927
MaeI CTAG 6 cut(s) 420, 611, 827, 857, 2162, 2256
MaeII ACGT 3 cut(s) 92, 1877, 2043
MaeIII GTNAC 8 cut(s) 67, 88, 221, 859, 1834, 1919, 2147, 2266
MbiI CCGCTC 1 cut(s) 140
MboII GAAGA 9 cut(s) 247, 278, 818, 1081, 1610, 1946, 1958, 1981, 2167
MfeI CAATTG 2 cut(s) 1467, 1593
MflI RGATCY 4 cut(s) 457, 1531, 1561, 1801
MhlI GDGCHC 5 cut(s) 162, 195, 411, 1243, 1476
MlsI TGGCCA 2 cut(s) 383, 1869
MluCI AATT 8 cut(s) 771, 785, 1311, 1467, 1536, 1593, 1827, 2172
MluNI TGGCCA 2 cut(s) 383, 1869
MlyI GAGTC 3 cut(s) 64, 1279, 2102
MmeI TCCRAC 1 cut(s) 2194
Mox20I TGGCCA 2 cut(s) 383, 1869
Mph1103I ATGCAT 1 cut(s) 1344
MroXI GAANNNNTTC 1 cut(s) 2249
MscI TGGCCA 2 cut(s) 383, 1869
MseI TTAA 3 cut(s) 980, 1644, 1787
MslI CAYNNNNRTG 2 cut(s) 1236, 2192
Msp20I TGGCCA 2 cut(s) 383, 1869
MspA1I CMGCKG 2 cut(s) 1571, 1841
MspI CCGG 4 cut(s) 198, 362, 1884, 1900
MspR9I CCNGG 5 cut(s) 120, 362, 385, 1189, 2262
MunI CAATTG 2 cut(s) 1467, 1593
MvaI CCWGG 4 cut(s) 120, 385, 1189, 2262
MvnI CGCG 1 cut(s) 445
MwoI GCNNNNNNNGC 7 cut(s) 283, 571, 580, 1216, 1247, 1526, 2245
NciI CCSGG 1 cut(s) 362
NcoI CCATGG 1 cut(s) 1772
NdeI CATATG 1 cut(s) 2233
NlaIV GGNNCC 2 cut(s) 459, 1563
NmeAIII GCCGAG 1 cut(s) 796
NmuCI GTSAC 3 cut(s) 67, 88, 2266
NsiI ATGCAT 1 cut(s) 1344
NspI RCATGY 1 cut(s) 1927
PagI TCATGA 2 cut(s) 1012, 1243
PaqCI CACCTGC 1 cut(s) 1415
PceI AGGCCT 1 cut(s) 388
PcsI WCGNNNNNNNCGW 1 cut(s) 89
PdmI GAANNNNTTC 1 cut(s) 2249
PfeI GAWTC 7 cut(s) 201, 638, 657, 914, 1431, 1700, 2011
Pfl23II CGTACG 1 cut(s) 93
PflMI CCANNNNNTGG 1 cut(s) 125
PleI GAGTC 3 cut(s) 64, 1279, 2101
PmaCI CACGTG 1 cut(s) 2044
PmlI CACGTG 1 cut(s) 2044
PpsI GAGTC 3 cut(s) 64, 1279, 2101
Ppu21I YACGTR 2 cut(s) 1878, 2044
Psp124BI GAGCTC 2 cut(s) 195, 1476
Psp6I CCWGG 4 cut(s) 118, 383, 1187, 2260
PspCI CACGTG 1 cut(s) 2044
PspFI CCCAGC 1 cut(s) 1687
PspGI CCWGG 4 cut(s) 118, 383, 1187, 2260
PspLI CGTACG 1 cut(s) 93
PspN4I GGNNCC 2 cut(s) 459, 1563
PspPI GGNCC 2 cut(s) 1747, 1902
PstI CTGCAG 3 cut(s) 431, 1531, 1858
PstNI CAGNNNCTG 3 cut(s) 26, 957, 1982
PsuI RGATCY 4 cut(s) 457, 1531, 1561, 1801
PvuII CAGCTG 1 cut(s) 1571
RsaI GTAC 8 cut(s) 95, 214, 416, 495, 1297, 1463, 1874, 2075
RsaNI GTAC 8 cut(s) 94, 213, 415, 494, 1296, 1462, 1873, 2074
RseI CAYNNNNRTG 2 cut(s) 1236, 2192
SacI GAGCTC 2 cut(s) 195, 1476
SaqAI TTAA 3 cut(s) 980, 1644, 1787
Sau96I GGNCC 2 cut(s) 1747, 1902
ScaI AGTACT 1 cut(s) 1463
SchI GAGTC 3 cut(s) 64, 1279, 2102
ScrFI CCNGG 5 cut(s) 120, 362, 385, 1189, 2262
SduI GDGCHC 5 cut(s) 162, 195, 411, 1243, 1476
SfaNI GCATC 7 cut(s) 323, 1104, 1183, 1237, 1351, 1627, 1927
SfcI CTRYAG 5 cut(s) 427, 1351, 1527, 1566, 1854
SmiMI CAYNNNNRTG 2 cut(s) 1236, 2192
SmlI CTYRAG 1 cut(s) 584
SmoI CTYRAG 1 cut(s) 584
Sse9I AATT 8 cut(s) 771, 785, 1311, 1467, 1536, 1593, 1827, 2172
SseBI AGGCCT 1 cut(s) 388
SsiI CCGC 7 cut(s) 59, 116, 140, 246, 443, 567, 1841
SspMI CTAG 6 cut(s) 420, 611, 827, 857, 2162, 2256
SstI GAGCTC 2 cut(s) 195, 1476
StuI AGGCCT 1 cut(s) 388
StyD4I CCNGG 5 cut(s) 118, 360, 383, 1187, 2260
StyI CCWWGG 3 cut(s) 419, 1743, 1772
TaaI ACNGT 3 cut(s) 967, 1068, 2089
TaiI ACGT 3 cut(s) 95, 1880, 2046
TaqII GACCGA 1 cut(s) 684
TasI AATT 8 cut(s) 771, 785, 1311, 1467, 1536, 1593, 1827, 2172
TatI WGTACW 4 cut(s) 1295, 1461, 1872, 2073
TfiI GAWTC 7 cut(s) 201, 638, 657, 914, 1431, 1700, 2011
Tru1I TTAA 3 cut(s) 980, 1644, 1787
Tru9I TTAA 3 cut(s) 980, 1644, 1787
TscAI CASTG 3 cut(s) 1071, 1280, 1863
TseFI GTSAC 3 cut(s) 67, 88, 2266
Tsp45I GTSAC 3 cut(s) 67, 88, 2266
TspDTI ATGAA 9 cut(s) 519, 630, 691, 731, 819, 1247, 1782, 1799, 1982
TspRI CASTG 3 cut(s) 1071, 1280, 1863
Van91I CCANNNNNTGG 1 cut(s) 125
XapI RAATTY 1 cut(s) 785
XbaI TCTAGA 1 cut(s) 2255
XceI RCATGY 1 cut(s) 1927
XcmI CCANNNNNNNNNTGG 1 cut(s) 934
XmaJI CCTAGG 1 cut(s) 419
XmiI GTMKAC 2 cut(s) 1108, 1379
XmnI GAANNNNTTC 1 cut(s) 2249
XspI CTAG 6 cut(s) 420, 611, 827, 857, 2162, 2256
ZrmI AGTACT 1 cut(s) 1463
Zsp2I ATGCAT 1 cut(s) 1344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.