RchiOBHm_Chr7g0216951

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
34853149 .. 34859784
6636 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19415

Sequence Viewer

Length: 2676 bp
ATGACGATCAACTCTCTGCTGCAAAAGCCGACCTCCTCCTCCTCTTTGCCCATAACAAACACAAAAAATAGCATTCTTGCCGCTTCCGTTGAGGTTGAAGAAGCTGAAGCAGCACTGATGAATACTAGTATTTCATCAGCAGAGAATAACAACAATAATGAGGCAGTTACGGTGAAGGCAGTGGTTACAGTGAAAATAACAACGGGAAGCCTGCTTTCCAACTTGTTTGGTTTGACAGCACCCCTCGATCTTTTCACTGATTTGCTCGGAAAAACCTTTCTTCTTGAGCTTGTTAGCACCGAGCTTGACCCTGATATTGGGTTGGAGAAGAAAACAATCCAGGGGTATGCGCACAAAGTGACCAGAATTGACGACGAGGTGAAGTATGAGAGCTCCTTCACCCTCCCAGCTGGTTTCGGAGAGGTGGGAGCTGTTCTGTTTGAAAATCAGCACCACGAGGAGCTTTACATCAAGACCATACATTTACACATCAATGGCTTCCCAGACCCTTCTGTGGTTACTGTCCCTTGTGATTCATGGGCTCACTCCAAGTATGTCAATCCAGACAAGAGAATCTTCTTCACCAGCAAGTCTTACTTACCATCAGAGACACCAAGTGGGTTGAAGAGGCTAAGAGAACTGGAGCTGCAATATTTGCGAGGAAATGGGGAGGGTGAAAGAAAAACGTCCGACAGAATTTATGATTATGATACATACAATGATCTTGGAAATCCTGATAGCGAAGATGATTTGGCTAGGCCCGTGCTTGGCGGCAAAGAGCATCCATACCCGAGGCGCTGCAGAACAGGACGACCACGCACCAAAAAGGATCCATTATCGGAGGAAAGAAGCAGCAGTGTGTATGTACCAAGAGATGAAGCTTTCGCAGAGGTGAAACAACTGACATTTGCTGCAAAGACCTTGAAATCCGTGCTGCACGCTTTGCTCCCGCAGCTTGAGATGTCACTTATTAATCCAAACCTAGGATTTCCCTACTTCACAGCCATAGATTCGCTGTTTAATGAAGGAGTCACAATGCCTAAGCCAAAAACTAGTGGGCTTTTTCAGTCTGTCATCCCAAGGCTAGTGAAGGCTGTTAGTGACAGCCAAGATGATCTTTTGCTCTTTGAGACCCCTGAAATAATCGATCGTGATAAATTTTCCTGGTTTAGAGATGAAGAATTTTCTCGGCAAACTCTAGCTGGTCTTAATCCATTTAGTATAGAGCTAGTCAAGGAGTGGCCATTGAAAAGTAAACTGGACCCCAAAATTTATGGTCCACCTGAATCATTGATCACAACAGAACTTGTGGAGAAAGAAATCAGAGGTTGTATGACTGTCAATGAGGCCTTGAAAAGAAAGAAGATGTTTATGTTGGATTATCATGATCTGCTCATGCCTTATGTAAACAAAGTGAGAGAGATTGAAGGGACCACATTATATGGTTCTAGGACACTGTTCTTCCTCACTGAAGAAGGCACATTGAGGCTTGTTGCCATTGAACTAACTCGCCCACCTGTTGGTGACAAGCCACAATGGAAGCAAGTGTTTACTCCTACCTGGGATGCCACTGGATGCTGGCTGTGGAGACTCGCTAAAGCGCATGTTTGTGCTCATGATGCTGGCTATCATCAGCTTGTCATCCACTGGCTGAGAACTCATTGTTGTACGGAGCCATATATAATTGCCGCCAATCGCCAATTAAGTGCAATGCATCCCATCTATAGACTTCTACTTCCTCATTTTCGGTACACAATGGAAATAAATGCCCTGGCTCGAGAAAGCCTCATCAATGCAGGTGGAATCATTGAGACCTCCTTCTCACCGGCAAAGTACTCCATTGAGCTCAGTTCAGCTGCTTATGACAAGTTCTGGCGCTTTGACATGGAAGCTTTGCCAGCAGATTTGATCAGAAGGGGAATGGCAGTTGAGGATCCCACAGCTGAGCATGGCTTAAAGCTAACAATTGAAGACTACCCATTTGCTAATGATGGTCTCATTCTTTGGGATGCTATTAAGGAGTGGGTGAGGGACTATGTGAACCACTACTATCCAGACCCAACTCTTGTTGAGAATGATCAAGAGCTTCAAGCTTGGTGGACAGAAGTTAGAACAAAAGGCCACGCTGACAAAAAGGATGAGCCATGGTGGCCAGTTCTGAATACCCCAGATAACCTAATACATGTTTTGACAACAATAATTTGGGTAACAGCTGGTCATCATGCAGCGGTAAACTTTGGCCAGTATATGTATGCCGGATACTTTCCAAACAGGCCTACAATAGCTCGAACCAACATGCCAACTGAAGATCCATCTGAGGAGTATTTCAACAACTTTTTGAAGAAGCCGGAGTCTGCATTGCTAATGTGCTTCCCCTCACAGATTCAAGCAACCAAAGTGATGGCTGTCTTAGACGTGTTATCGAACCATTCACCTGATGAGGAGTATCTTGGTGAGAAAATGGAGTCCTCTTGGGCTGAAAATCCTGTCATCAAGGCTGCATTTGAGCGCTTCAATGGGAATTTGAAAAAGCTAGAAGCAATAATTGATGAGAGGAATACTAATATAAACCTGAAAAACAGAGTTGGAGCAGGGGTGGTTCCATATGAGCTTTTGAAGCCATTCTCAAAGCCTGGGGTCACAGGAATGGGAGTTCCTAATAGTATTTCAATTTGA

Protein Analysis

891

Amino Acids

100.89

Weight (kDa)

5.53

Isoelectric Point (pI)

40.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 123 - 194 2.5e-06 PLAT/LH2 domain
Lipoxygenase PF00305 207 - 874 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000211)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45140 AT3G45140
fragaria_vesca FvH4_3g43530 FvH4_3g43540 FvH4_3g43540 FvH4_5g05680 FvH4_5g26250 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00420 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440
malus_domestica MD02G1317800.v1.1 MD03G1021200.v1.1 MD07G1003600.v1.1 MD07G1003700.v1.1 MD07G1003900.v1.1 MD07G1004500.v1.1 MD11G1023100.v1.1
prunus_persica Prupe.2G005300_v2.0.a1 Prupe.2G005300_v2.0.a1 Prupe.2G005500_v2.0.a1 Prupe.2G005800_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1
pyrus_communis pycom02g26570 pycom02g26590 pycom02g26600 pycom07g00350 pycom11g01870
rosa_chinensis RchiOBHm_Chr1g0314111 RchiOBHm_Chr1g0314131 RchiOBHm_Chr1g0314151 RchiOBHm_Chr5g0078061 RchiOBHm_Chr5g0078091 RchiOBHm_Chr6g0285041 RchiOBHm_Chr6g0285051 RchiOBHm_Chr7g0216951
rosa_laevigata RLG00000002519 RLG00000002520 RLG00000002523 RLG00000002524 RLG00000002526 RLG00000012683 RLG00000030702 RLG00000030773 RLG00000030774 RLG00000030775 RLG00000036743 RLG00000036744 RLG00000036746 RLG00000036748
rosa_multiflora Rmu_co8050096.1_g000001 Rmu_co8091784.1_g000001 Rmu_co8342063.1_g000001 Rmu_co8353481.1_g000001 Rmu_co8390647.1_g000001 Rmu_sc0000670.1_g000032 Rmu_sc0000854.1_g000025 Rmu_sc0002478.1_g000009 Rmu_sc0004992.1_g000003 Rmu_sc0006851.1_g000003 Rmu_sc0009311.1_g000001 Rmu_sc0009311.1_g000005 Rmu_ssc0000154.1_g000036 Rmu_ssc0000154.1_g000041
rosa_roxburghii Rroxscaffold_1G00000310 Rroxscaffold_1G00000320 Rroxscaffold_1G00000330 Rroxscaffold_1G00000340 Rroxscaffold_1G00004130 Rroxscaffold_1G00004190 Rroxscaffold_3G00242690 Rroxscaffold_3G00242700 Rroxscaffold_3G00242710 Rroxscaffold_3G00242720 Rroxscaffold_3G00242740 Rroxscaffold_4G00332030 Rroxscaffold_4G00332050 Rroxscaffold_4G00332060 Rroxscaffold_6G00427990 Rroxscaffold_7G00183800 Rroxscaffold_7G00184080
rosa_rugosa Rorug01G0000100 Rorug01G0000200 Rorug01G0130400 Rorug05G0458200 Rorug05G0458300 Rorug05G0458400 Rorug06G0170200 Rorug07G0164500 RorugPtG0006300 RorugPtG0006400 RorugPtG0006500
rosa_samantha Rh1AG008700 Rh1AG008800 Rh1BG002100 Rh1BG002200 Rh1BG002700 Rh1BG012600 Rh1BG012900 Rh1BG120700 Rh1DG004500 Rh1DG004600 Rh1DG004700 Rh1DG004800 Rh1DG013000 Rh5BG535400 Rh5CG558800 Rh5DG547500 Rh5DG547600 Rh6AG281900 Rh6BG282500 Rh6CG284200 Rh6CG284300 Rh6CG284400 Rh6DG277500 Rh6DG277600 Rh7AG304700 Rh7BG296300 Rh7CG323200 Rh7CG323300 Rh7CG323400 Rh7CG323500 Rh7CG323800 Rh7DG304900
rosa_wichuraiana Rw1G000380 Rw1G000390 Rw1G000400 Rw5G047570 Rw5G047580 Rw6G024220 Rw7G025870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1787
Acc16I TGCGCA 1 cut(s) 351
Acc36I ACCTGC 1 cut(s) 1787
AccB7I CCANNNNNTGG 1 cut(s) 1520
AciI CCGC 5 cut(s) 81, 771, 950, 1689, 2228
AclWI GGATC 5 cut(s) 824, 837, 1928, 1941, 2303
AcoI YGGCCR 3 cut(s) 1241, 2150, 2239
AcsI RAATTY 5 cut(s) 696, 1157, 1181, 1269, 2521
AcuI CTGAAG 3 cut(s) 126, 1491, 2325
AdeI CACNNNGTG 2 cut(s) 358, 617
AfaI GTAC 4 cut(s) 867, 1669, 1751, 1835
AfeI AGCGCT 1 cut(s) 2510
AfiI CCNNNNNNNGG 5 cut(s) 317, 514, 767, 983, 1520
AflIII ACRYGT 2 cut(s) 2182, 2415
AhlI ACTAGT 2 cut(s) 125, 1052
AjiI CACGTC 1 cut(s) 2416
AjnI CCWGG 5 cut(s) 339, 1163, 1559, 1770, 2632
AloI GAACNNNNNNTCC 2 cut(s) 2637, 2669
Alw21I GWGCWC 3 cut(s) 395, 1615, 1848
Alw26I GTCTC 5 cut(s) 602, 1124, 1582, 1805, 2000
AlwI GGATC 5 cut(s) 824, 837, 1928, 1941, 2303
Ama87I CYCGRG 2 cut(s) 790, 1776
Aor51HI AGCGCT 1 cut(s) 2510
AoxI GGCC 7 cut(s) 758, 1241, 1347, 2119, 2150, 2239, 2273
ApoI RAATTY 5 cut(s) 696, 1157, 1181, 1269, 2521
ArsI GACNNNNNNTTYG 2 cut(s) 1964, 1996
AseI ATTAAT 1 cut(s) 972
Asp700I GAANNNNTTC 1 cut(s) 2621
AspA2I CCTAGG 1 cut(s) 982
AspLEI GCGC 5 cut(s) 352, 798, 1603, 1878, 2511
AspS9I GGNCC 4 cut(s) 759, 1261, 1277, 1431
AvaI CYCGRG 2 cut(s) 790, 1776
AvaII GGWCC 3 cut(s) 1261, 1277, 1431
AvrII CCTAGG 1 cut(s) 982
BalI TGGCCA 3 cut(s) 1243, 2152, 2241
BamHI GGATCC 2 cut(s) 829, 1933
BanII GRGCYC 3 cut(s) 395, 544, 1848
BauI CACGAG 1 cut(s) 455
BbsI GAAGAC 1 cut(s) 1977
Bbv12I GWGCWC 3 cut(s) 395, 1615, 1848
BccI CCATC 5 cut(s) 610, 1727, 1985, 2320, 2395
BciT130I CCWGG 5 cut(s) 341, 1165, 1561, 1772, 2634
BciVI GTATCC 1 cut(s) 2252
BclI TGATCA 3 cut(s) 1293, 1908, 2077
BcoDI GTCTC 5 cut(s) 602, 1124, 1582, 1805, 2000
BcuI ACTAGT 2 cut(s) 125, 1052
BfaI CTAG 9 cut(s) 126, 756, 983, 1053, 1085, 1199, 1229, 1449, 2534
BfmI CTRYAG 2 cut(s) 799, 1723
BfoI RGCGCY 3 cut(s) 799, 1879, 2512
BfuAI ACCTGC 1 cut(s) 1787
BfuI GTATCC 1 cut(s) 2252
BglI GCCNNNNNGGC 1 cut(s) 2149
BlnI CCTAGG 1 cut(s) 982
BlpI GCTNAGC 1 cut(s) 1944
BmcAI AGTACT 1 cut(s) 1835
Bme1390I CCNGG 5 cut(s) 341, 1165, 1561, 1772, 2634
Bme18I GGWCC 3 cut(s) 1261, 1277, 1431
BmeT110I CYCGRG 2 cut(s) 790, 1776
BmgBI CACGTC 1 cut(s) 2416
BmgT120I GGNCC 4 cut(s) 759, 1261, 1277, 1431
BmiI GGNNCC 6 cut(s) 831, 1263, 1432, 1674, 1935, 2601
BmrFI CCNGG 5 cut(s) 341, 1165, 1561, 1772, 2634
BmsI GCATC 6 cut(s) 790, 1555, 1565, 1609, 1723, 1999
BpiI GAAGAC 1 cut(s) 1977
BplI GAGNNNNNCTC 2 cut(s) 1770, 1802
BpmI CTGGAG 1 cut(s) 662
Bpu10I CCTNAGC 1 cut(s) 1041
Bpu1102I GCTNAGC 1 cut(s) 1944
BpuEI CTTGAG 2 cut(s) 305, 977
Bsa29I ATCGAT 1 cut(s) 1146
BsaI GGTCTC 3 cut(s) 1124, 1805, 2000
BsaJI CCNNGG 8 cut(s) 340, 791, 982, 1079, 1560, 1770, 2144, 2633
BsaXI ACNNNNNCTCC 2 cut(s) 2580, 2610
Bsc4I CCNNNNNNNGG 5 cut(s) 317, 514, 767, 983, 1520
Bse118I RCCGGY 1 cut(s) 1825
Bse1I ACTGG 6 cut(s) 645, 1263, 1576, 1652, 2153, 2242
Bse3DI GCAATG 2 cut(s) 1716, 2357
BseBI CCWGG 5 cut(s) 341, 1165, 1561, 1772, 2634
BseCI ATCGAT 1 cut(s) 1146
BseDI CCNNGG 8 cut(s) 340, 791, 982, 1079, 1560, 1770, 2144, 2633
BseGI GGATG 8 cut(s) 781, 1074, 1570, 1580, 1641, 1714, 2014, 2143
BseLI CCNNNNNNNGG 5 cut(s) 317, 514, 767, 983, 1520
BseMI GCAATG 2 cut(s) 1716, 2357
BseMII CTCAG 4 cut(s) 1643, 1861, 1935, 2307
BseNI ACTGG 6 cut(s) 645, 1263, 1576, 1652, 2153, 2242
BseRI GAGGAG 6 cut(s) 25, 28, 31, 473, 2333, 2456
BseYI CCCAGC 1 cut(s) 406
BsgI GTGCAG 1 cut(s) 920
Bsh1285I CGRYCG 1 cut(s) 1150
BshFI GGCC 7 cut(s) 760, 1243, 1349, 2121, 2152, 2241, 2275
BshVI ATCGAT 1 cut(s) 1146
BsiEI CGRYCG 1 cut(s) 1150
BsiHKAI GWGCWC 3 cut(s) 395, 1615, 1848
BsiHKCI CYCGRG 2 cut(s) 790, 1776
BsiSI CCGG 3 cut(s) 1826, 2256, 2348
BslFI GGGAC 3 cut(s) 509, 1444, 2045
BslI CCNNNNNNNGG 5 cut(s) 317, 514, 767, 983, 1520
BsmAI GTCTC 5 cut(s) 602, 1124, 1582, 1805, 2000
BsmFI GGGAC 3 cut(s) 509, 1444, 2045
BsmI GAATGC 1 cut(s) 72
BsnI GGCC 7 cut(s) 760, 1243, 1349, 2121, 2152, 2241, 2275
Bso31I GGTCTC 3 cut(s) 1124, 1805, 2000
BsoBI CYCGRG 2 cut(s) 790, 1776
Bsp1286I GDGCHC 4 cut(s) 395, 544, 1615, 1848
Bsp1720I GCTNAGC 1 cut(s) 1944
Bsp19I CCATGG 1 cut(s) 2144
BspACI CCGC 5 cut(s) 81, 771, 950, 1689, 2228
BspANI GGCC 7 cut(s) 760, 1243, 1349, 2121, 2152, 2241, 2275
BspCNI CTCAG 4 cut(s) 1644, 1860, 1936, 2308
BspDI ATCGAT 1 cut(s) 1146
BspHI TCATGA 2 cut(s) 1384, 1615
BspLI GGNNCC 6 cut(s) 831, 1263, 1432, 1674, 1935, 2601
BspMAI CTGCAG 1 cut(s) 803
BspMI ACCTGC 1 cut(s) 1787
BspPI GGATC 5 cut(s) 824, 837, 1928, 1941, 2303
BspTNI GGTCTC 3 cut(s) 1124, 1805, 2000
BsrDI GCAATG 2 cut(s) 1716, 2357
BsrFI RCCGGY 1 cut(s) 1825
BsrI ACTGG 6 cut(s) 645, 1263, 1576, 1652, 2153, 2242
BssAI RCCGGY 1 cut(s) 1825
BssECI CCNNGG 8 cut(s) 340, 791, 982, 1079, 1560, 1770, 2144, 2633
BssSI CACGAG 1 cut(s) 455
BssT1I CCWWGG 3 cut(s) 982, 1079, 2144
Bst2BI CACGAG 1 cut(s) 455
Bst2UI CCWGG 5 cut(s) 341, 1165, 1561, 1772, 2634
Bst4CI ACNGT 5 cut(s) 172, 190, 523, 1339, 1458
Bst6I CTCTTC 1 cut(s) 620
BstAPI GCANNNNNTGC 2 cut(s) 655, 943
BstC8I GCNNGC 5 cut(s) 212, 939, 1580, 1624, 1899
BstDEI CTNAG 7 cut(s) 632, 1041, 1652, 1847, 1944, 2316, 2410
BstDSI CCRYGG 1 cut(s) 2144
BstF5I GGATG 8 cut(s) 781, 1074, 1570, 1580, 1641, 1714, 2014, 2143
BstH2I RGCGCY 3 cut(s) 799, 1879, 2512
BstHHI GCGC 5 cut(s) 352, 798, 1603, 1878, 2511
BstMAI GTCTC 5 cut(s) 602, 1124, 1582, 1805, 2000
BstMCI CGRYCG 1 cut(s) 1150
BstMWI GCNNNNNNNGC 9 cut(s) 25, 110, 655, 943, 952, 1619, 1898, 2149, 2617
BstNI CCWGG 5 cut(s) 341, 1165, 1561, 1772, 2634
BstNSI RCATGY 3 cut(s) 1607, 2186, 2299
BstSCI CCNGG 5 cut(s) 339, 1163, 1559, 1770, 2632
BstSFI CTRYAG 2 cut(s) 799, 1723
BstV2I GAAGAC 1 cut(s) 1977
BstX2I RGATCY 3 cut(s) 829, 1933, 2308
BstXI CCANNNNNNTGG 1 cut(s) 2401
BstYI RGATCY 3 cut(s) 829, 1933, 2308
Bsu15I ATCGAT 1 cut(s) 1146
BsuI GTATCC 1 cut(s) 2252
BsuRI GGCC 7 cut(s) 760, 1243, 1349, 2121, 2152, 2241, 2275
BsuTUI ATCGAT 1 cut(s) 1146
BtgI CCRYGG 1 cut(s) 2144
BtrI CACGTC 1 cut(s) 2416
BtsCI GGATG 8 cut(s) 781, 1074, 1570, 1580, 1641, 1714, 2014, 2143
BtsI GCAGTG 2 cut(s) 186, 862
BtsIMutI CAGTG 9 cut(s) 113, 186, 195, 255, 862, 1454, 1467, 1569, 1645
BveI ACCTGC 1 cut(s) 1787
Cac8I GCNNGC 5 cut(s) 212, 939, 1580, 1624, 1899
CciI TCATGA 2 cut(s) 1384, 1615
CfoI GCGC 5 cut(s) 352, 798, 1603, 1878, 2511
Cfr10I RCCGGY 1 cut(s) 1825
Cfr13I GGNCC 4 cut(s) 759, 1261, 1277, 1431
ClaI ATCGAT 1 cut(s) 1146
Csp6I GTAC 4 cut(s) 866, 1668, 1750, 1834
CspCI CAANNNNNGTGG 4 cut(s) 1780, 1815, 2078, 2113
CviQI GTAC 4 cut(s) 866, 1668, 1750, 1834
DdeI CTNAG 7 cut(s) 632, 1041, 1652, 1847, 1944, 2316, 2410
DraIII CACNNNGTG 2 cut(s) 358, 617
EaeI YGGCCR 3 cut(s) 1241, 2150, 2239
Eam1104I CTCTTC 1 cut(s) 620
EarI CTCTTC 1 cut(s) 620
Ecl136II GAGCTC 2 cut(s) 393, 1846
Eco130I CCWWGG 3 cut(s) 982, 1079, 2144
Eco147I AGGCCT 2 cut(s) 1349, 2275
Eco24I GRGCYC 3 cut(s) 395, 544, 1848
Eco31I GGTCTC 3 cut(s) 1124, 1805, 2000
Eco47I GGWCC 3 cut(s) 1261, 1277, 1431
Eco47III AGCGCT 1 cut(s) 2510
Eco53kI GAGCTC 2 cut(s) 393, 1846
Eco57I CTGAAG 3 cut(s) 126, 1491, 2325
Eco88I CYCGRG 2 cut(s) 790, 1776
EcoICRI GAGCTC 2 cut(s) 393, 1846
EcoRII CCWGG 5 cut(s) 339, 1163, 1559, 1770, 2632
EcoT14I CCWWGG 3 cut(s) 982, 1079, 2144
EcoT22I ATGCAT 1 cut(s) 1716
EcoT38I GRGCYC 3 cut(s) 395, 544, 1848
ErhI CCWWGG 3 cut(s) 982, 1079, 2144
FalI AAGNNNNNCTT 6 cut(s) 560, 592, 581, 613, 1101, 1133
FaqI GGGAC 3 cut(s) 509, 1444, 2045
FauI CCCGC 1 cut(s) 957
FauNDI CATATG 1 cut(s) 2605
FbaI TGATCA 3 cut(s) 1293, 1908, 2077
FokI GGATG 8 cut(s) 768, 1061, 1577, 1587, 1628, 1701, 2021, 2150
FriOI GRGCYC 3 cut(s) 395, 544, 1848
FspAI RTGCGCAY 1 cut(s) 351
FspBI CTAG 9 cut(s) 126, 756, 983, 1053, 1085, 1199, 1229, 1449, 2534
FspI TGCGCA 1 cut(s) 351
GlaI GCGC 5 cut(s) 351, 797, 1602, 1877, 2510
GsaI CCCAGC 1 cut(s) 410
GsuI CTGGAG 1 cut(s) 662
HaeII RGCGCY 3 cut(s) 799, 1879, 2512
HaeIII GGCC 7 cut(s) 760, 1243, 1349, 2121, 2152, 2241, 2275
HapII CCGG 3 cut(s) 1826, 2256, 2348
HhaI GCGC 5 cut(s) 352, 798, 1603, 1878, 2511
Hin6I GCGC 5 cut(s) 350, 796, 1601, 1876, 2509
HinP1I GCGC 5 cut(s) 350, 796, 1601, 1876, 2509
HindIII AAGCTT 3 cut(s) 879, 1890, 2091
HpaII CCGG 3 cut(s) 1826, 2256, 2348
Hpy166II GTNNAC 8 cut(s) 1256, 1280, 1408, 1551, 1752, 2041, 2100, 2233
Hpy188I TCNGA 9 cut(s) 269, 419, 607, 691, 841, 1325, 1913, 2160, 2317
Hpy8I GTNNAC 8 cut(s) 1256, 1280, 1408, 1551, 1752, 2041, 2100, 2233
Hpy99I CGWCG 1 cut(s) 377
HpyAV CCTTC 9 cut(s) 169, 406, 519, 1019, 1084, 1421, 1469, 1828, 1908
HpyCH4III ACNGT 5 cut(s) 172, 190, 523, 1339, 1458
HpyCH4IV ACGT 2 cut(s) 686, 2415
HpyF10VI GCNNNNNNNGC 9 cut(s) 25, 110, 655, 943, 952, 1619, 1898, 2149, 2617
HpyF3I CTNAG 7 cut(s) 632, 1041, 1652, 1847, 1944, 2316, 2410
HpySE526I ACGT 2 cut(s) 686, 2415
HspAI GCGC 5 cut(s) 350, 796, 1601, 1876, 2509
Ksp22I TGATCA 3 cut(s) 1293, 1908, 2077
LmnI GCTCC 7 cut(s) 398, 428, 460, 643, 951, 1672, 2588
LweI GCATC 6 cut(s) 790, 1555, 1565, 1609, 1723, 1999
MaeI CTAG 9 cut(s) 126, 756, 983, 1053, 1085, 1199, 1229, 1449, 2534
MaeII ACGT 2 cut(s) 686, 2415
MfeI CAATTG 1 cut(s) 1965
MflI RGATCY 3 cut(s) 829, 1933, 2308
MhlI GDGCHC 4 cut(s) 395, 544, 1615, 1848
MlsI TGGCCA 3 cut(s) 1243, 2152, 2241
MluNI TGGCCA 3 cut(s) 1243, 2152, 2241
MlyI GAGTC 4 cut(s) 1038, 1584, 2360, 2474
MmeI TCCRAC 5 cut(s) 243, 303, 714, 1356, 2566
Mox20I TGGCCA 3 cut(s) 1243, 2152, 2241
Mph1103I ATGCAT 1 cut(s) 1716
MroXI GAANNNNTTC 1 cut(s) 2621
MscI TGGCCA 3 cut(s) 1243, 2152, 2241
MseI TTAA 6 cut(s) 972, 1020, 1209, 1703, 1955, 2016
MslI CAYNNNNRTG 3 cut(s) 492, 1608, 2645
Msp20I TGGCCA 3 cut(s) 1243, 2152, 2241
MspA1I CMGCKG 5 cut(s) 410, 1856, 1943, 2213, 2228
MspI CCGG 3 cut(s) 1826, 2256, 2348
MspR9I CCNGG 5 cut(s) 341, 1165, 1561, 1772, 2634
MunI CAATTG 1 cut(s) 1965
Mva1269I GAATGC 1 cut(s) 72
MvaI CCWGG 5 cut(s) 341, 1165, 1561, 1772, 2634
MwoI GCNNNNNNNGC 9 cut(s) 25, 110, 655, 943, 952, 1619, 1898, 2149, 2617
NcoI CCATGG 1 cut(s) 2144
NdeI CATATG 1 cut(s) 2605
NlaIV GGNNCC 6 cut(s) 831, 1263, 1432, 1674, 1935, 2601
NmeAIII GCCGAG 1 cut(s) 1168
NmuCI GTSAC 6 cut(s) 358, 963, 1030, 1100, 1523, 2638
NsbI TGCGCA 1 cut(s) 351
NsiI ATGCAT 1 cut(s) 1716
NspI RCATGY 3 cut(s) 1607, 2186, 2299
PaeR7I CTCGAG 1 cut(s) 1776
PagI TCATGA 2 cut(s) 1384, 1615
PaqCI CACCTGC 1 cut(s) 1787
PceI AGGCCT 2 cut(s) 1349, 2275
PciI ACATGT 1 cut(s) 2182
PctI GAATGC 1 cut(s) 72
PdmI GAANNNNTTC 1 cut(s) 2621
PfeI GAWTC 6 cut(s) 533, 573, 1010, 1286, 1803, 2383
PflMI CCANNNNNTGG 1 cut(s) 1520
Ple19I CGATCG 1 cut(s) 1150
PleI GAGTC 4 cut(s) 1037, 1584, 2359, 2473
PpsI GAGTC 4 cut(s) 1037, 1584, 2359, 2473
PscI ACATGT 1 cut(s) 2182
PshBI ATTAAT 1 cut(s) 972
Psp124BI GAGCTC 2 cut(s) 395, 1848
Psp6I CCWGG 5 cut(s) 339, 1163, 1559, 1770, 2632
PspFI CCCAGC 1 cut(s) 406
PspGI CCWGG 5 cut(s) 339, 1163, 1559, 1770, 2632
PspN4I GGNNCC 6 cut(s) 831, 1263, 1432, 1674, 1935, 2601
PspPI GGNCC 4 cut(s) 759, 1261, 1277, 1431
PstI CTGCAG 1 cut(s) 803
PsuI RGATCY 3 cut(s) 829, 1933, 2308
PvuI CGATCG 1 cut(s) 1150
PvuII CAGCTG 4 cut(s) 410, 1856, 1943, 2213
RsaI GTAC 4 cut(s) 867, 1669, 1751, 1835
RsaNI GTAC 4 cut(s) 866, 1668, 1750, 1834
RseI CAYNNNNRTG 3 cut(s) 492, 1608, 2645
SacI GAGCTC 2 cut(s) 395, 1848
SaqAI TTAA 6 cut(s) 972, 1020, 1209, 1703, 1955, 2016
Sau96I GGNCC 4 cut(s) 759, 1261, 1277, 1431
ScaI AGTACT 1 cut(s) 1835
SchI GAGTC 4 cut(s) 1038, 1584, 2360, 2474
ScrFI CCNGG 5 cut(s) 341, 1165, 1561, 1772, 2634
SduI GDGCHC 4 cut(s) 395, 544, 1615, 1848
SfaNI GCATC 6 cut(s) 790, 1555, 1565, 1609, 1723, 1999
SfcI CTRYAG 2 cut(s) 799, 1723
Sfr274I CTCGAG 1 cut(s) 1776
SinI GGWCC 3 cut(s) 1261, 1277, 1431
SlaI CTCGAG 1 cut(s) 1776
SmiMI CAYNNNNRTG 3 cut(s) 492, 1608, 2645
SmlI CTYRAG 3 cut(s) 284, 956, 1776
SmoI CTYRAG 3 cut(s) 284, 956, 1776
SpeI ACTAGT 2 cut(s) 125, 1052
SseBI AGGCCT 2 cut(s) 1349, 2275
SsiI CCGC 5 cut(s) 81, 771, 950, 1689, 2228
SspI AATATT 1 cut(s) 653
SspMI CTAG 9 cut(s) 126, 756, 983, 1053, 1085, 1199, 1229, 1449, 2534
SstI GAGCTC 2 cut(s) 395, 1848
StuI AGGCCT 2 cut(s) 1349, 2275
StyD4I CCNGG 5 cut(s) 339, 1163, 1559, 1770, 2632
StyI CCWWGG 3 cut(s) 982, 1079, 2144
TaaI ACNGT 5 cut(s) 172, 190, 523, 1339, 1458
TaiI ACGT 2 cut(s) 689, 2418
TaqI TCGA 5 cut(s) 246, 1146, 1777, 2287, 2423
TatI WGTACW 1 cut(s) 1833
TauI GCSGC 3 cut(s) 83, 774, 1691
TfiI GAWTC 6 cut(s) 533, 573, 1010, 1286, 1803, 2383
Tru1I TTAA 6 cut(s) 972, 1020, 1209, 1703, 1955, 2016
Tru9I TTAA 6 cut(s) 972, 1020, 1209, 1703, 1955, 2016
TscAI CASTG 9 cut(s) 120, 186, 195, 262, 862, 1461, 1474, 1576, 1652
TseFI GTSAC 6 cut(s) 358, 963, 1030, 1100, 1523, 2638
Tsp45I GTSAC 6 cut(s) 358, 963, 1030, 1100, 1523, 2638
TspDTI ATGAA 6 cut(s) 123, 134, 525, 891, 1038, 1191
TspGWI ACGGA 3 cut(s) 76, 919, 1685
TspRI CASTG 9 cut(s) 120, 186, 195, 262, 862, 1461, 1474, 1576, 1652
Van91I CCANNNNNTGG 1 cut(s) 1520
VpaK11BI GGWCC 3 cut(s) 1261, 1277, 1431
VspI ATTAAT 1 cut(s) 972
XapI RAATTY 5 cut(s) 696, 1157, 1181, 1269, 2521
XceI RCATGY 3 cut(s) 1607, 2186, 2299
XhoI CTCGAG 1 cut(s) 1776
XmaJI CCTAGG 1 cut(s) 982
XmnI GAANNNNTTC 1 cut(s) 2621
XspI CTAG 9 cut(s) 126, 756, 983, 1053, 1085, 1199, 1229, 1449, 2534
ZrmI AGTACT 1 cut(s) 1835
Zsp2I ATGCAT 1 cut(s) 1716
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.