RH5DG547600

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG547600.1

Sequence Viewer

Length: 2946 bp
ATGTTGAAACCCAGACTACTTCACCCATCAGAGTCTCTGTTTCTCCACCCCAAGCCGTTCCTCCATGGAAGCAGTGGCCGCAGCAGTACTGCTTCACTTCCTGTCTGGTCAACAAAGCCCTCATTCCCCAATAAACACAAAAGCCTTCGATTCGGCTCAACTAATTATAGATACAAAACAAAAGCCGTAAGCAGTGATAGTACTAGTACTAGTAGCAGCAGCGATAGTACCAGTACTATTAGCAACAGTGATGGTACTAGTAGCAGCGTCAGCAGTACTAGTACTAGCAGCAGCAGCACTAGTAATACTAGCACTCCTGGACCGACGACGACAACAACGATAACCACTACCACTGAGGTGACGGAAGTAGTGACGGAAACTGAAGATGCAGTGGTCGACAAAGAAGTAGAAGTAGTGACCACAAAAGAAGTGGTGACGGAGAAGTTCACGAGTGTTAAAGCAACCATAACGGTGACGCTTACTGTTGGAGGGTTTCTGAACAACTTAGGCCTAACCCGAGGAATCGATGATGTCAGAGATATGCTTGGTCAAACTCTCTTCATGGATCTTATTAGTGCTCACGTTGATCCCAAAACTGGATCAGAGAAGGAGCATGTTACCGGGTTCGCACGCAGGAGTAGCCAGAAGGACAGTGAGATTGTATACGAGACAGATTTTAAAGTTCCATTAGATTTTGGAGAAGTGGGTGCCGTTTTAATAGAGAATGAGCACCACAAGGAGATGTTTCTCAAGGATATTGTGCTGGATGGCTTGCCTAATGGTCCTGTACTACTTACCTGTAATTCATGGCTCCATTCCAAGTATGACAATCCAGCGAAGAGAGTCTTCTTCACAAACAAGTCATATTTGCCATCTCAAACTCCAAGTGCATTGGTGAGGCTAAGAGAAGAGGAGCTTGTGACATTGCGCGGCAATGGCCAAGGAGAGCGCAAGAGCTTTGAGAGAATATACGATTACGATGTTTACAATGATCTTGGGAATCCTGATTCGAGTCTAAAGCTTATAAGACCGGTTCTTGGAGGAAGCAAAGAATTCCCCTATCCCAGGCGATGTCGAACTGGGCGACCAATGAGTGAAGCAGATAAACATTCGGAGAAAAGGAGCAGCAAGGTGTACGTTCCTAGAGACGAAGCTTTCTCAGAGGTGAAGCAGTTAACATTTTCAGCAAAGACAGTGTACGCTGTCATGCATGCAGTAGTACCGTCCCTGGAGAACGCCATCACTGACACTAATCTTGGATTCACATTGTTCACGTCAATAGACACACTTTTCAATGAAGGCATTAAGTTGCCTCCAATTAAAGAACAAGGGATTCTCCAAGCTATACTTCCTAGACTAGTAAATGCTTTGGCTTCTGGAGGTGATGTTTTGCGGTTCGTGCCCCCAGAAACAATGAATAGAGACAAATTCTTCTGGTTTAGGGACGAGGAATTTGCTAGGCAGACTCTTGCCGGTCTCAACCCATATAGCATTAAGTTGGTGACGGAATGGCCATTGAAGAGTGAATTGGATCCCGACGTGTATGGTCCCCCAGAATCTGCAATTACCTCGGAAATGATTGAGCGAGAAATTAAAGGCTTTGCGACCATCAAAGAGGCCATAAGAGAAAAGAAGTTGTTCATACTAGATTACCATGATTTGTTTTTACCATACGTGAGCAAAGTACGAGAGATTGAAGGCACAACACTATATGGATCAAGGACATTGTTCTTCCTTACCCTAGAAGGCACCCTAAGGCCGCTGGCCATTGAGTTGACTCGACCGCCAATGGACGGGAAGCCTCAGTGGAAGCAAGCCTTCCAACCCAGCTGGAATGCTACCGGTGTCTGGCTTTGGAGGATTGCCAAAGCTCATGTCCTTGCTCATGACTCTGGTTACCATCAACTTGTTAGTCACTGGCTAAGAACGCATTGTGCCACAGAACCATATATAATCGCAACCAATCGTCAACTGAGTGTGTTGCACCCAATCTACAAATTGTTGCATCCCCATTTCAGATACACTATGGAGATCAATGCTCTTGCTCGTGAATCACTTATCAATGCCGGTGGCATCATTGAAACCTCATTCTCACCTAGAAAATATTCCATGGAGCTTTGCTCTATTGCCTATGCTAAGGAGTGGCGATTCGACCAAGAGGCCCTACCAGCCGACCTTATTCGCAGGGGCATGGCTGTTGAGGACCCAACTGCTCCCCACGGTCTAAGGCTATCGATTCAGGATTACCCTTTTGCCAATGATGGACTCCTCCTATGGGATGCCATTAAACAGTGGGTCTCTGACTATGTAAACCACTACTACAGAGAGTCCACCCTTGTACAAACTGATCAAGAGCTCCAAGCATGGTGGACAGAGATCAGAACAGTAGGTCACGGAGACAAGAAGGACGAACCCTGGTGGCCTGACCTAAATACCCCTCAAGACCTCATCGACATCCTCACAACAATACTTTGGGTTACATCCGGTCACCATGCAGCAGTCAACTTTGGTCAGTATGCCTATGCAGGCTATTTCCCTAATCGCCCAACCATTGCAAGAACCAATGTGCCCACGGAGGACCCTGACGATGAGGTTTGGGAAATGTTCATGAAAAAACCCGAAGCTGCCCTTTTGCGGTGCTTTCCTTCCCAAATTCAAGCCACAACGATCATGGCGGTTTTAGACATTTTGTCTAGTCATTCGCCGGACGAGGAGTACATTGGAGAGAAGATGGAGGACGCGTGGGCTGAAGACGAAGTTATAAGGGCGGCGTTTGAGCGGTTTAAGGGGAGGCTGATAATGCTTGAACAAACTATTGATGAAAGAAATGCTAATTTTGAGTTGAAGAACAGAAATGGAGCTGGGGTTGTGCCTTATGAGCTTTTGAAGCCCTTTTCAGAACCTGGGGTTACCGCGAAGGGTGTTCCATATAGCATCTCTATTTGA

Protein Analysis

981

Amino Acids

110.52

Weight (kDa)

5.74

Isoelectric Point (pI)

39.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 211 - 284 2.8e-09 PLAT/LH2 domain
Lipoxygenase PF00305 298 - 964 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000211)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45140 AT3G45140
fragaria_vesca FvH4_3g43530 FvH4_3g43540 FvH4_3g43540 FvH4_5g05680 FvH4_5g26250 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00420 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440
malus_domestica MD02G1317800.v1.1 MD03G1021200.v1.1 MD07G1003600.v1.1 MD07G1003700.v1.1 MD07G1003900.v1.1 MD07G1004500.v1.1 MD11G1023100.v1.1
prunus_persica Prupe.2G005300_v2.0.a1 Prupe.2G005300_v2.0.a1 Prupe.2G005500_v2.0.a1 Prupe.2G005800_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1
pyrus_communis pycom02g26570 pycom02g26590 pycom02g26600 pycom07g00350 pycom11g01870
rosa_chinensis RchiOBHm_Chr1g0314111 RchiOBHm_Chr1g0314131 RchiOBHm_Chr1g0314151 RchiOBHm_Chr5g0078061 RchiOBHm_Chr5g0078091 RchiOBHm_Chr6g0285041 RchiOBHm_Chr6g0285051 RchiOBHm_Chr7g0216951
rosa_laevigata RLG00000002519 RLG00000002520 RLG00000002523 RLG00000002524 RLG00000002526 RLG00000012683 RLG00000030702 RLG00000030773 RLG00000030774 RLG00000030775 RLG00000036743 RLG00000036744 RLG00000036746 RLG00000036748
rosa_multiflora Rmu_co8050096.1_g000001 Rmu_co8091784.1_g000001 Rmu_co8342063.1_g000001 Rmu_co8353481.1_g000001 Rmu_co8390647.1_g000001 Rmu_sc0000670.1_g000032 Rmu_sc0000854.1_g000025 Rmu_sc0002478.1_g000009 Rmu_sc0004992.1_g000003 Rmu_sc0006851.1_g000003 Rmu_sc0009311.1_g000001 Rmu_sc0009311.1_g000005 Rmu_ssc0000154.1_g000036 Rmu_ssc0000154.1_g000041
rosa_roxburghii Rroxscaffold_1G00000310 Rroxscaffold_1G00000320 Rroxscaffold_1G00000330 Rroxscaffold_1G00000340 Rroxscaffold_1G00004130 Rroxscaffold_1G00004190 Rroxscaffold_3G00242690 Rroxscaffold_3G00242700 Rroxscaffold_3G00242710 Rroxscaffold_3G00242720 Rroxscaffold_3G00242740 Rroxscaffold_4G00332030 Rroxscaffold_4G00332050 Rroxscaffold_4G00332060 Rroxscaffold_6G00427990 Rroxscaffold_7G00183800 Rroxscaffold_7G00184080
rosa_rugosa Rorug01G0000100 Rorug01G0000200 Rorug01G0130400 Rorug05G0458200 Rorug05G0458300 Rorug05G0458400 Rorug06G0170200 Rorug07G0164500 RorugPtG0006300 RorugPtG0006400 RorugPtG0006500
rosa_samantha Rh1AG008700 Rh1AG008800 Rh1BG002100 Rh1BG002200 Rh1BG002700 Rh1BG012600 Rh1BG012900 Rh1BG120700 Rh1DG004500 Rh1DG004600 Rh1DG004700 Rh1DG004800 Rh1DG013000 Rh5BG535400 Rh5CG558800 Rh5DG547500 Rh5DG547600 Rh6AG281900 Rh6BG282500 Rh6CG284200 Rh6CG284300 Rh6CG284400 Rh6DG277500 Rh6DG277600 Rh7AG304700 Rh7BG296300 Rh7CG323200 Rh7CG323300 Rh7CG323400 Rh7CG323500 Rh7CG323800 Rh7DG304900
rosa_wichuraiana Rw1G000380 Rw1G000390 Rw1G000400 Rw5G047570 Rw5G047580 Rw6G024220 Rw7G025870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1025, 2762
AccB1I GGYRCC 2 cut(s) 707, 1748
AccBSI CCGCTC 1 cut(s) 2779
AccI GTMKAC 2 cut(s) 396, 663
AccII CGCG 3 cut(s) 930, 2741, 2915
AclWI GGATC 6 cut(s) 573, 581, 607, 1526, 1539, 1723
AcoI YGGCCR 4 cut(s) 76, 937, 1511, 1764
AcsI RAATTY 4 cut(s) 1052, 1427, 1451, 2652
AcuI CTGAAG 2 cut(s) 402, 2769
AfiI CCNNNNNNNGG 7 cut(s) 596, 1037, 1065, 1793, 1848, 2275, 2634
AflIII ACRYGT 2 cut(s) 1539, 2739
AgeI ACCGGT 2 cut(s) 1030, 1841
AgsI TTSAA 9 cut(s) 7, 1294, 1519, 1697, 2081, 2657, 2807, 2845, 2887
AhdI GACNNNNNGTC 1 cut(s) 2689
AhlI ACTAGT 6 cut(s) 203, 209, 257, 278, 299, 1357
AjiI CACGTC 2 cut(s) 1275, 1540
AjnI CCWGG 5 cut(s) 316, 1064, 1227, 2414, 2902
AjuI GAANNNNNNNTTGG 4 cut(s) 1332, 1364, 1511, 1543
AleI CACNNNNGTG 1 cut(s) 356
Alw21I GWGCWC 3 cut(s) 580, 732, 2358
Alw26I GTCTC 7 cut(s) 39, 662, 1140, 1416, 1481, 2302, 2391
AlwI GGATC 6 cut(s) 573, 581, 607, 1526, 1539, 1723
AlwNI CAGNNNCTG 2 cut(s) 1559, 2903
Ama87I CYCGRG 1 cut(s) 516
AoxI GGCC 9 cut(s) 76, 508, 937, 1511, 1617, 1757, 1764, 2160, 2420
ApoI RAATTY 4 cut(s) 1052, 1427, 1451, 2652
ArsI GACNNNNNNTTYG 4 cut(s) 1436, 1468, 1860, 1892
AsiGI ACCGGT 2 cut(s) 1030, 1841
Asp700I GAANNNNTTC 2 cut(s) 1637, 2104
AspLEI GCGC 2 cut(s) 930, 951
AspS9I GGNCC 6 cut(s) 320, 782, 1547, 2161, 2203, 2578
AsuC2I CCSGG 1 cut(s) 622
AvaI CYCGRG 1 cut(s) 516
AvaII GGWCC 5 cut(s) 320, 782, 1547, 2203, 2578
AxyI CCTNAGG 1 cut(s) 1754
BaeGI GKGCMC 2 cut(s) 1404, 2571
BalI TGGCCA 3 cut(s) 939, 1513, 1766
BamHI GGATCC 1 cut(s) 1531
BanI GGYRCC 2 cut(s) 707, 1748
BanII GRGCYC 1 cut(s) 2358
BauI CACGAG 2 cut(s) 448, 2046
BbsI GAAGAC 2 cut(s) 838, 2757
Bbv12I GWGCWC 3 cut(s) 580, 732, 2358
BccI CCATC 9 cut(s) 34, 245, 761, 880, 1247, 1616, 1908, 2255, 2725
BceAI ACGGC 3 cut(s) 40, 170, 695
BcgI CGANNNNNNTGC 4 cut(s) 1436, 1470, 1551, 1585
BciT130I CCWGG 5 cut(s) 318, 1066, 1229, 2416, 2904
BclI TGATCA 1 cut(s) 2347
BcnI CCSGG 1 cut(s) 622
BcoDI GTCTC 7 cut(s) 39, 662, 1140, 1416, 1481, 2302, 2391
BcuI ACTAGT 6 cut(s) 203, 209, 257, 278, 299, 1357
BfmI CTRYAG 1 cut(s) 2320
BmcAI AGTACT 6 cut(s) 88, 202, 208, 235, 277, 283
Bme1390I CCNGG 6 cut(s) 318, 622, 1066, 1229, 2416, 2904
Bme18I GGWCC 5 cut(s) 320, 782, 1547, 2203, 2578
BmeRI GACNNNNNGTC 1 cut(s) 2689
BmeT110I CYCGRG 1 cut(s) 516
BmgBI CACGTC 2 cut(s) 1275, 1540
BmgT120I GGNCC 6 cut(s) 320, 782, 1547, 2161, 2203, 2578
BmiI GGNNCC 7 cut(s) 709, 812, 1533, 1549, 1750, 2205, 2580
BmrFI CCNGG 6 cut(s) 318, 622, 1066, 1229, 2416, 2904
BmrI ACTGGG 1 cut(s) 1089
BmsI GCATC 4 cut(s) 376, 2014, 2082, 2269
BmuI ACTGGG 1 cut(s) 1089
BpiI GAAGAC 2 cut(s) 838, 2757
BplI GAGNNNNNCTC 2 cut(s) 2105, 2137
BpmI CTGGAG 2 cut(s) 1250, 1398
Bpu10I CCTNAGC 1 cut(s) 2136
BpuEI CTTGAG 2 cut(s) 734, 2424
BpuMI CCSGG 1 cut(s) 622
Bsa29I ATCGAT 2 cut(s) 525, 2234
BsaAI YACGTR 1 cut(s) 1675
BsaI GGTCTC 2 cut(s) 1481, 2302
BsaWI WCCGGW 3 cut(s) 1030, 1841, 2483
BsaXI ACNNNNNCTCC 8 cut(s) 298, 328, 1371, 1401, 2726, 2756, 2850, 2880
Bsc4I CCNNNNNNNGG 7 cut(s) 596, 1037, 1065, 1793, 1848, 2275, 2634
Bse118I RCCGGY 4 cut(s) 1030, 1472, 1841, 2066
Bse1I ACTGG 4 cut(s) 231, 601, 1084, 1922
Bse21I CCTNAGG 1 cut(s) 1754
Bse3DI GCAATG 3 cut(s) 923, 940, 2550
BseBI CCWGG 5 cut(s) 318, 1066, 1229, 2416, 2904
BseCI ATCGAT 2 cut(s) 525, 2234
BseGI GGATG 5 cut(s) 772, 2005, 2284, 2454, 2480
BseLI CCNNNNNNNGG 7 cut(s) 596, 1037, 1065, 1793, 1848, 2275, 2634
BseMI GCAATG 3 cut(s) 923, 940, 2550
BseMII CTCAG 4 cut(s) 345, 1173, 1817, 1964
BseNI ACTGG 4 cut(s) 231, 601, 1084, 1922
BseRI GAGGAG 3 cut(s) 926, 2258, 2726
BseSI GKGCMC 2 cut(s) 1404, 2571
BseYI CCCAGC 2 cut(s) 1826, 2861
Bsh1236I CGCG 3 cut(s) 930, 2741, 2915
Bsh1285I CGRYCG 1 cut(s) 1784
BshFI GGCC 9 cut(s) 78, 510, 939, 1513, 1619, 1759, 1766, 2162, 2422
BshNI GGYRCC 2 cut(s) 707, 1748
BshTI ACCGGT 2 cut(s) 1030, 1841
BshVI ATCGAT 2 cut(s) 525, 2234
BsiEI CGRYCG 1 cut(s) 1784
BsiHKAI GWGCWC 3 cut(s) 580, 732, 2358
BsiHKCI CYCGRG 1 cut(s) 516
BsiSI CCGG 7 cut(s) 621, 1031, 1473, 1842, 2067, 2484, 2705
BslFI GGGAC 3 cut(s) 1210, 1457, 1533
BslI CCNNNNNNNGG 7 cut(s) 596, 1037, 1065, 1793, 1848, 2275, 2634
BsmAI GTCTC 7 cut(s) 39, 662, 1140, 1416, 1481, 2302, 2391
BsmBI CGTCTC 1 cut(s) 1140
BsmFI GGGAC 3 cut(s) 1210, 1457, 1533
BsmI GAATGC 1 cut(s) 1840
BsnI GGCC 9 cut(s) 78, 510, 939, 1513, 1619, 1759, 1766, 2162, 2422
Bso31I GGTCTC 2 cut(s) 1481, 2302
BsoBI CYCGRG 1 cut(s) 516
Bsp1286I GDGCHC 5 cut(s) 580, 732, 1404, 2358, 2571
Bsp1407I TGTACA 1 cut(s) 2338
Bsp19I CCATGG 2 cut(s) 64, 2109
BspANI GGCC 9 cut(s) 78, 510, 939, 1513, 1619, 1759, 1766, 2162, 2422
BspCNI CTCAG 4 cut(s) 346, 1172, 1816, 1965
BspDI ATCGAT 2 cut(s) 525, 2234
BspFNI CGCG 3 cut(s) 930, 2741, 2915
BspHI TCATGA 2 cut(s) 1885, 2607
BspLI GGNNCC 7 cut(s) 709, 812, 1533, 1549, 1750, 2205, 2580
BspPI GGATC 6 cut(s) 573, 581, 607, 1526, 1539, 1723
BspT107I GGYRCC 2 cut(s) 707, 1748
BspTNI GGTCTC 2 cut(s) 1481, 2302
BsrBI CCGCTC 1 cut(s) 2779
BsrDI GCAATG 3 cut(s) 923, 940, 2550
BsrFI RCCGGY 4 cut(s) 1030, 1472, 1841, 2066
BsrGI TGTACA 1 cut(s) 2338
BsrI ACTGG 4 cut(s) 231, 601, 1084, 1922
BssAI RCCGGY 4 cut(s) 1030, 1472, 1841, 2066
BssNAI GTATAC 1 cut(s) 664
BssSI CACGAG 2 cut(s) 448, 2046
BssT1I CCWWGG 3 cut(s) 64, 940, 2109
Bst1107I GTATAC 1 cut(s) 664
Bst2BI CACGAG 2 cut(s) 448, 2046
Bst2UI CCWGG 5 cut(s) 318, 1066, 1229, 2416, 2904
Bst4CI ACNGT 9 cut(s) 248, 472, 484, 653, 1195, 1224, 2222, 2292, 2386
Bst6I CTCTTC 4 cut(s) 563, 833, 903, 1514
BstAUI TGTACA 1 cut(s) 2338
BstBAI YACGTR 1 cut(s) 1675
BstC8I GCNNGC 6 cut(s) 631, 773, 1212, 1764, 1815, 2527
BstDSI CCRYGG 4 cut(s) 64, 2109, 2218, 2571
BstEII GGTNACC 3 cut(s) 1895, 2486, 2908
BstENI CCTNNNNNAGG 1 cut(s) 1063
BstF5I GGATG 5 cut(s) 772, 2005, 2284, 2454, 2480
BstFNI CGCG 3 cut(s) 930, 2741, 2915
BstHHI GCGC 2 cut(s) 930, 951
BstMAI GTCTC 7 cut(s) 39, 662, 1140, 1416, 1481, 2302, 2391
BstMCI CGRYCG 1 cut(s) 1784
BstNI CCWGG 5 cut(s) 318, 1066, 1229, 2416, 2904
BstNSI RCATGY 2 cut(s) 617, 1214
BstPI GGTNACC 3 cut(s) 1895, 2486, 2908
BstSCI CCNGG 6 cut(s) 316, 620, 1064, 1227, 2414, 2902
BstSFI CTRYAG 1 cut(s) 2320
BstSLI GKGCMC 2 cut(s) 1404, 2571
BstUI CGCG 3 cut(s) 930, 2741, 2915
BstV2I GAAGAC 2 cut(s) 838, 2757
BstX2I RGATCY 2 cut(s) 565, 1531
BstYI RGATCY 2 cut(s) 565, 1531
BstZ17I GTATAC 1 cut(s) 664
Bsu15I ATCGAT 2 cut(s) 525, 2234
Bsu36I CCTNAGG 1 cut(s) 1754
BsuRI GGCC 9 cut(s) 78, 510, 939, 1513, 1619, 1759, 1766, 2162, 2422
BsuTUI ATCGAT 2 cut(s) 525, 2234
BtgI CCRYGG 4 cut(s) 64, 2109, 2218, 2571
BtgZI GCGATG 1 cut(s) 1084
BtrI CACGTC 2 cut(s) 1275, 1540
BtsCI GGATG 5 cut(s) 772, 2005, 2284, 2454, 2480
BtsI GCAGTG 3 cut(s) 79, 199, 396
Cac8I GCNNGC 6 cut(s) 631, 773, 1212, 1764, 1815, 2527
CaiI CAGNNNCTG 2 cut(s) 1559, 2903
CciI TCATGA 2 cut(s) 1885, 2607
CfoI GCGC 2 cut(s) 930, 951
Cfr10I RCCGGY 4 cut(s) 1030, 1472, 1841, 2066
Cfr13I GGNCC 6 cut(s) 320, 782, 1547, 2161, 2203, 2578
ClaI ATCGAT 2 cut(s) 525, 2234
CseI GACGC 3 cut(s) 256, 484, 2747
CspAI ACCGGT 2 cut(s) 1030, 1841
CspCI CAANNNNNGTGG 6 cut(s) 411, 446, 2050, 2085, 2348, 2383
DraI TTTAAA 1 cut(s) 679
DriI GACNNNNNGTC 1 cut(s) 2689
EaeI YGGCCR 4 cut(s) 76, 937, 1511, 1764
Eam1104I CTCTTC 4 cut(s) 563, 833, 903, 1514
Eam1105I GACNNNNNGTC 1 cut(s) 2689
EarI CTCTTC 4 cut(s) 563, 833, 903, 1514
Ecl136II GAGCTC 1 cut(s) 2356
Eco130I CCWWGG 3 cut(s) 64, 940, 2109
Eco147I AGGCCT 1 cut(s) 510
Eco24I GRGCYC 1 cut(s) 2358
Eco31I GGTCTC 2 cut(s) 1481, 2302
Eco47I GGWCC 5 cut(s) 320, 782, 1547, 2203, 2578
Eco53kI GAGCTC 1 cut(s) 2356
Eco57I CTGAAG 2 cut(s) 402, 2769
Eco81I CCTNAGG 1 cut(s) 1754
Eco88I CYCGRG 1 cut(s) 516
Eco91I GGTNACC 3 cut(s) 1895, 2486, 2908
EcoICRI GAGCTC 1 cut(s) 2356
EcoNI CCTNNNNNAGG 1 cut(s) 1063
EcoO109I RGGNCCY 3 cut(s) 2161, 2203, 2578
EcoO65I GGTNACC 3 cut(s) 1895, 2486, 2908
EcoRI GAATTC 1 cut(s) 1052
EcoRII CCWGG 5 cut(s) 316, 1064, 1227, 2414, 2902
EcoT14I CCWWGG 3 cut(s) 64, 940, 2109
EcoT22I ATGCAT 1 cut(s) 1212
EcoT38I GRGCYC 1 cut(s) 2358
ErhI CCWWGG 3 cut(s) 64, 940, 2109
Esp3I CGTCTC 1 cut(s) 1140
FaqI GGGAC 3 cut(s) 1210, 1457, 1533
FbaI TGATCA 1 cut(s) 2347
FblI GTMKAC 2 cut(s) 396, 663
FokI GGATG 5 cut(s) 779, 1992, 2291, 2441, 2467
FriOI GRGCYC 1 cut(s) 2358
GlaI GCGC 2 cut(s) 929, 950
GsaI CCCAGC 2 cut(s) 1830, 2865
GsuI CTGGAG 2 cut(s) 1250, 1398
HaeIII GGCC 9 cut(s) 78, 510, 939, 1513, 1619, 1759, 1766, 2162, 2422
HapII CCGG 7 cut(s) 621, 1031, 1473, 1842, 2067, 2484, 2705
HgaI GACGC 3 cut(s) 256, 484, 2747
HhaI GCGC 2 cut(s) 930, 951
Hin6I GCGC 2 cut(s) 928, 949
HinP1I GCGC 2 cut(s) 928, 949
HincII GTYRAC 6 cut(s) 111, 397, 1176, 1776, 1970, 2503
HindII GTYRAC 6 cut(s) 111, 397, 1176, 1776, 1970, 2503
HindIII AAGCTT 2 cut(s) 1019, 1152
HpaI GTTAAC 1 cut(s) 1176
HpaII CCGG 7 cut(s) 621, 1031, 1473, 1842, 2067, 2484, 2705
Hpy99I CGWCG 3 cut(s) 328, 331, 1541
HpyCH4III ACNGT 9 cut(s) 248, 472, 484, 653, 1195, 1224, 2222, 2292, 2386
HpyCH4IV ACGT 5 cut(s) 582, 1137, 1274, 1539, 1674
HpySE526I ACGT 5 cut(s) 582, 1137, 1274, 1539, 1674
HspAI GCGC 2 cut(s) 928, 949
Ksp22I TGATCA 1 cut(s) 2347
KspAI GTTAAC 1 cut(s) 1176
LmnI GCTCC 8 cut(s) 610, 816, 913, 1122, 2113, 2218, 2361, 2858
LweI GCATC 4 cut(s) 376, 2014, 2082, 2269
MaeII ACGT 5 cut(s) 582, 1137, 1274, 1539, 1674
MbiI CCGCTC 1 cut(s) 2779
MflI RGATCY 2 cut(s) 565, 1531
MhlI GDGCHC 5 cut(s) 580, 732, 1404, 2358, 2571
MlsI TGGCCA 3 cut(s) 939, 1513, 1766
MluI ACGCGT 1 cut(s) 2739
MluNI TGGCCA 3 cut(s) 939, 1513, 1766
MlyI GAGTC 8 cut(s) 41, 852, 1021, 1459, 1771, 1883, 2259, 2336
MmeI TCCRAC 2 cut(s) 466, 1846
Mox20I TGGCCA 3 cut(s) 939, 1513, 1766
Mph1103I ATGCAT 1 cut(s) 1212
MroXI GAANNNNTTC 2 cut(s) 1637, 2104
MscI TGGCCA 3 cut(s) 939, 1513, 1766
MslI CAYNNNNRTG 2 cut(s) 356, 470
Msp20I TGGCCA 3 cut(s) 939, 1513, 1766
MspA1I CMGCKG 2 cut(s) 1762, 1830
MspI CCGG 7 cut(s) 621, 1031, 1473, 1842, 2067, 2484, 2705
MspR9I CCNGG 6 cut(s) 318, 622, 1066, 1229, 2416, 2904
Mva1269I GAATGC 1 cut(s) 1840
MvaI CCWGG 5 cut(s) 318, 1066, 1229, 2416, 2904
MvnI CGCG 3 cut(s) 930, 2741, 2915
NciI CCSGG 1 cut(s) 622
NcoI CCATGG 2 cut(s) 64, 2109
NlaIV GGNNCC 7 cut(s) 709, 812, 1533, 1549, 1750, 2205, 2580
NsiI ATGCAT 1 cut(s) 1212
NspI RCATGY 2 cut(s) 617, 1214
OliI CACNNNNGTG 1 cut(s) 356
PaeI GCATGC 1 cut(s) 1214
PagI TCATGA 2 cut(s) 1885, 2607
PceI AGGCCT 1 cut(s) 510
PcsI WCGNNNNNNNCGW 2 cut(s) 335, 1081
PctI GAATGC 1 cut(s) 1840
PdmI GAANNNNTTC 2 cut(s) 1637, 2104
PfoI TCCNGGA 1 cut(s) 316
PinAI ACCGGT 2 cut(s) 1030, 1841
PleI GAGTC 8 cut(s) 40, 851, 1020, 1459, 1771, 1883, 2259, 2335
PpsI GAGTC 8 cut(s) 40, 851, 1020, 1459, 1771, 1883, 2259, 2335
Ppu21I YACGTR 1 cut(s) 1675
PpuMI RGGWCCY 2 cut(s) 2203, 2578
PsiI TTATAA 2 cut(s) 1025, 2762
Psp124BI GAGCTC 1 cut(s) 2358
Psp5II RGGWCCY 2 cut(s) 2203, 2578
Psp6I CCWGG 5 cut(s) 316, 1064, 1227, 2414, 2902
PspEI GGTNACC 3 cut(s) 1895, 2486, 2908
PspFI CCCAGC 2 cut(s) 1826, 2861
PspGI CCWGG 5 cut(s) 316, 1064, 1227, 2414, 2902
PspN4I GGNNCC 7 cut(s) 709, 812, 1533, 1549, 1750, 2205, 2580
PspPI GGNCC 6 cut(s) 320, 782, 1547, 2161, 2203, 2578
PspPPI RGGWCCY 2 cut(s) 2203, 2578
PstNI CAGNNNCTG 2 cut(s) 1559, 2903
PsuI RGATCY 2 cut(s) 565, 1531
PvuII CAGCTG 1 cut(s) 1830
RseI CAYNNNNRTG 2 cut(s) 356, 470
SacI GAGCTC 1 cut(s) 2358
SalI GTCGAC 1 cut(s) 395
Sau96I GGNCC 6 cut(s) 320, 782, 1547, 2161, 2203, 2578
ScaI AGTACT 6 cut(s) 88, 202, 208, 235, 277, 283
SchI GAGTC 8 cut(s) 41, 852, 1021, 1459, 1771, 1883, 2259, 2336
ScrFI CCNGG 6 cut(s) 318, 622, 1066, 1229, 2416, 2904
SduI GDGCHC 5 cut(s) 580, 732, 1404, 2358, 2571
SfaNI GCATC 4 cut(s) 376, 2014, 2082, 2269
SfcI CTRYAG 1 cut(s) 2320
SinI GGWCC 5 cut(s) 320, 782, 1547, 2203, 2578
SmiMI CAYNNNNRTG 2 cut(s) 356, 470
SmlI CTYRAG 2 cut(s) 749, 2439
SmoI CTYRAG 2 cut(s) 749, 2439
SpeI ACTAGT 6 cut(s) 203, 209, 257, 278, 299, 1357
SphI GCATGC 1 cut(s) 1214
SseBI AGGCCT 1 cut(s) 510
SspI AATATT 1 cut(s) 2105
SstI GAGCTC 1 cut(s) 2358
StuI AGGCCT 1 cut(s) 510
StyD4I CCNGG 6 cut(s) 316, 620, 1064, 1227, 2414, 2902
StyI CCWWGG 3 cut(s) 64, 940, 2109
TaaI ACNGT 9 cut(s) 248, 472, 484, 653, 1195, 1224, 2222, 2292, 2386
TaiI ACGT 5 cut(s) 585, 1140, 1277, 1542, 1677
TaqI TCGA 9 cut(s) 148, 396, 525, 1010, 1075, 1780, 2151, 2234, 2451
TaqII GACCGA 1 cut(s) 337
TatI WGTACW 9 cut(s) 86, 200, 206, 233, 275, 281, 787, 2338, 2715
TauI GCSGC 4 cut(s) 81, 933, 1762, 2771
TspDTI ATGAA 8 cut(s) 550, 795, 1311, 1430, 1630, 2596, 2624, 2835
TspGWI ACGGA 6 cut(s) 377, 389, 452, 1520, 2409, 2588
VpaK11BI GGWCC 5 cut(s) 320, 782, 1547, 2203, 2578
XagI CCTNNNNNAGG 1 cut(s) 1063
XapI RAATTY 4 cut(s) 1052, 1427, 1451, 2652
XceI RCATGY 2 cut(s) 617, 1214
XcmI CCANNNNNNNNNTGG 3 cut(s) 71, 427, 2668
XmiI GTMKAC 2 cut(s) 396, 663
XmnI GAANNNNTTC 2 cut(s) 1637, 2104
ZrmI AGTACT 6 cut(s) 88, 202, 208, 235, 277, 283
Zsp2I ATGCAT 1 cut(s) 1212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.