MD02G1317800.v1.1

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
37219640 .. 37227516
7877 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1317800.v1.1.491

Sequence Viewer

Length: 2745 bp
ATGATGACATCTCAGCTGCAGAAACCCAACTATGCTCCATCCTTCCCTCTCTTACCAAAATCCTCTATTAACCCTAATCATCTGATTAAGCATGGTAGCCCCTCCCTGATCAGCATCCTTCCGCGCCACCATGTCCATCAAAATCGTAATAAGAAAAACTCCTCATCCTTGGTGATCCGTGCCACTTCTAGTGATCTCAAATCATCACCCGTATCAGTGTCCACGGTTACTTCTACGGAAAATAACGCGTTTACGGTAAAGGCTTTGGTGACGGTGACAGTAACAGGAGGGTTACTCTCCAGCATAGGCTTGACTCGGCCCCTCGATGACTTAACCGACTTGCTCGGAAAAACTTTGCTTTTGGAGCTTGTTAGCGCCGAGCTTGACCCCAAGACGGGGTTGGAGAAAGAAACAGTGAAGGGGTATGGGCACAAAGCGAGCCACAAGGATGACGAGGTGGTGTATGAGGCTACTTTCACCATCCCAGCAGGGTTTGGAGAGGTTGGAGCTGTTCAGGTAGAGAATGAACACCACAAGGAGATGTTCATCAAGAGCATCGACCTCAACGGCTTCCCAAACGGCACTGTTAATGTTCCGTGTAATACCTGGGCTCATTCCAAATTTGACAACCCAGAGAAGAGAATTTTTTTCACTAACAAGTCGTACCTACCATCAGAGACACCGAGTGGGTTGAAGAAGCTAAGAGAATCGGAGCTGCAGACTTTGCGAGGAAATGGAGAGGGCCAAAGAAAAACATCTGATAGGATCTACGATTATGACACTTACAATGACATTGGCGATCCGGACAGCAAAGATGAACTGGCTAGGCCTGTCCTTGGTGGCAAAGATCACCCGTACCCGAGGCGCTGCAGAACTGGAAGACCACGCTCTAAAAAGGATCCTTTGTCGGAACAAAGAAGCAGCAGTGTGTATGTACCAAGAGATGAAGCTTTTGCAGACGTGAAACAGCTGACATTTTCAACAAAGACCCTGAAATCTGTGCTACATGCTTTGCTCCCTTCCCTCGAGACAGCACTTCTTGACCCAGACCTAGGATTTCCATACTTCAAAGCCATAGATTCACTGTATAACGAAGGAGTCACGTTACCTAAGCCAAAGACTGGTGGGTTTTTCCAGACAATCATCCCAAGGCTAGTCAAGACCATTATAGATGGTGGAGATGATCTTTTGCTCTTTGAGACCCCCGAAATAATAGACCGTGATAAATTTTCTTGGTTTAGAGATGAAGAATTTTCCCGGCAAACTCTTGCTGGTCTTAATCCATATAGTATCGAGCTAGTGACGGAATGGCCATTGAAAAGTAAACTCAACCCCGAGATTTATGGCCCCCCTGAATCATTGATCACAACAGAACTGGTTGAGAAGGAGATCAAAGGTTGTATGACTGTCAATGAGGCCTTGGAAAGGAAGAAGATGTTTATTTTGGATTACCATGATCTGCTCATGCCTTACGTGAACAAAGTAAGAGAGATTGAAGGTACCACACTGTATGGTTCTCGTACACTATTCTTCCTCACTGCAGATGGGACACTGAGGCCTGTTGCCATTGAACTCACTCGACCGCCTGTTGGTGACAAGCCACAATGGAAGCAAGTCTTTACTCCAACCTGGGATGCCACCGGTTGCTGGCTCTGGAGGCTTGCTAAAGCCCACGTTCTTGCACATGACGCCGGCTATCATCAGCTTGTCGTGCACTGGCTGAGGACTCATTGCTGTACAGAGCCATATATAATTGCTGCTAATCGACAATTAAGCGCAATGCATCCCATCTACAGACTTCTTCACCCTCATTTCCGGTATACAATGGAAATCAATGCTCTGGCTCGAGAAAGCCTCATCAATGCAGGTGGAGTCATTGAGAGCACCTTTTCACCTGGAAAGTACTCCATAGAGTTGAGTTCTGCCGCTTATGACCAGCTTTGGCGCTTTGACATGGAAGCTTTGCCAGCAGATCTCATCAGAAGGGGAATGGCAGTTGAGGATTCTACAGCTGAGCATGGCTTGAAGCTAGCAATTGAAGACTACCCATTTGCAAATGATGGCCTCATCCTGTGGGATGCCATTAAGGAGTGGGTGAGTGATTATGTGAACCACTACTATACAGACCCAAATCTTATTGAGTCTGATACAGAGCTTCAAGGTTGGTGGACAGAAGTTAGAACCAAAGGCCATGCAGACAAGAAAGATGAGCCATGGTGGCCTGTTTTGAAAACCCCGGAAAATCTGATTCACATTTTGACAACCATAATTTGGGTAACAGCAGGTCACCATGCAGCAGTGAACTTTGGCCAGTACATGTATGCTGGATATTTCCCTAACCGCCCTACAATTGCTCGAACCAATATGCCAACTGAAGATCCATCTGATGAGTATTTCCAGAACTTCTTGAAGAAACCAGAAATGGCTCTACTGATGTGCTTCCCCTCACAGATTCAAGCAACAAAAGTTATGGCCGTCTTAGATGTGCTTTCGAATCATTCACCCGATGAGGAGTATATTGGTGGGAATCCAGAGTCATCTTGGGCTGAAAATCCTGTCATCAAGGCCGCATATGAGAAATTCAATGGCAATTTGAAGAGGCTAGAAGGAATTATTGATGAGAGGAATACCAATTTGAAACTGAAAAACAGAGTTGGAGCAGGCGTCGTTCCATATGAGCTTTTGAAGCCATTCTCAACATCCGGTGTCACAGGAATGGGAGTTCCAAACAGCATCTCCATCTAA

Protein Analysis

915

Amino Acids

102.87

Weight (kDa)

6.04

Isoelectric Point (pI)

39.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 148 - 217 8.8e-10 PLAT/LH2 domain
Lipoxygenase PF00305 230 - 897 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000211)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45140 AT3G45140
fragaria_vesca FvH4_3g43530 FvH4_3g43540 FvH4_3g43540 FvH4_5g05680 FvH4_5g26250 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00420 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440
malus_domestica MD02G1317800.v1.1 MD03G1021200.v1.1 MD07G1003600.v1.1 MD07G1003700.v1.1 MD07G1003900.v1.1 MD07G1004500.v1.1 MD11G1023100.v1.1
prunus_persica Prupe.2G005300_v2.0.a1 Prupe.2G005300_v2.0.a1 Prupe.2G005500_v2.0.a1 Prupe.2G005800_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1
pyrus_communis pycom02g26570 pycom02g26590 pycom02g26600 pycom07g00350 pycom11g01870
rosa_chinensis RchiOBHm_Chr1g0314111 RchiOBHm_Chr1g0314131 RchiOBHm_Chr1g0314151 RchiOBHm_Chr5g0078061 RchiOBHm_Chr5g0078091 RchiOBHm_Chr6g0285041 RchiOBHm_Chr6g0285051 RchiOBHm_Chr7g0216951
rosa_laevigata RLG00000002519 RLG00000002520 RLG00000002523 RLG00000002524 RLG00000002526 RLG00000012683 RLG00000030702 RLG00000030773 RLG00000030774 RLG00000030775 RLG00000036743 RLG00000036744 RLG00000036746 RLG00000036748
rosa_multiflora Rmu_co8050096.1_g000001 Rmu_co8091784.1_g000001 Rmu_co8342063.1_g000001 Rmu_co8353481.1_g000001 Rmu_co8390647.1_g000001 Rmu_sc0000670.1_g000032 Rmu_sc0000854.1_g000025 Rmu_sc0002478.1_g000009 Rmu_sc0004992.1_g000003 Rmu_sc0006851.1_g000003 Rmu_sc0009311.1_g000001 Rmu_sc0009311.1_g000005 Rmu_ssc0000154.1_g000036 Rmu_ssc0000154.1_g000041
rosa_roxburghii Rroxscaffold_1G00000310 Rroxscaffold_1G00000320 Rroxscaffold_1G00000330 Rroxscaffold_1G00000340 Rroxscaffold_1G00004130 Rroxscaffold_1G00004190 Rroxscaffold_3G00242690 Rroxscaffold_3G00242700 Rroxscaffold_3G00242710 Rroxscaffold_3G00242720 Rroxscaffold_3G00242740 Rroxscaffold_4G00332030 Rroxscaffold_4G00332050 Rroxscaffold_4G00332060 Rroxscaffold_6G00427990 Rroxscaffold_7G00183800 Rroxscaffold_7G00184080
rosa_rugosa Rorug01G0000100 Rorug01G0000200 Rorug01G0130400 Rorug05G0458200 Rorug05G0458300 Rorug05G0458400 Rorug06G0170200 Rorug07G0164500 RorugPtG0006300 RorugPtG0006400 RorugPtG0006500
rosa_samantha Rh1AG008700 Rh1AG008800 Rh1BG002100 Rh1BG002200 Rh1BG002700 Rh1BG012600 Rh1BG012900 Rh1BG120700 Rh1DG004500 Rh1DG004600 Rh1DG004700 Rh1DG004800 Rh1DG013000 Rh5BG535400 Rh5CG558800 Rh5DG547500 Rh5DG547600 Rh6AG281900 Rh6BG282500 Rh6CG284200 Rh6CG284300 Rh6CG284400 Rh6DG277500 Rh6DG277600 Rh7AG304700 Rh7BG296300 Rh7CG323200 Rh7CG323300 Rh7CG323400 Rh7CG323500 Rh7CG323800 Rh7DG304900
rosa_wichuraiana Rw1G000380 Rw1G000390 Rw1G000400 Rw5G047570 Rw5G047580 Rw6G024220 Rw7G025870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1856
Acc36I ACCTGC 2 cut(s) 1856, 2273
Acc65I GGTACC 1 cut(s) 1499
AccB1I GGYRCC 1 cut(s) 1499
AccB7I CCANNNNNTGG 2 cut(s) 1121, 2271
AccI GTMKAC 1 cut(s) 1820
AccII CGCG 2 cut(s) 124, 248
AccIII TCCGGA 1 cut(s) 802
AciI CCGC 5 cut(s) 122, 1583, 1926, 2341, 2568
AclWI GGATC 6 cut(s) 169, 773, 794, 893, 906, 2372
AcoI YGGCCR 3 cut(s) 1310, 2308, 2472
AcsI RAATTY 5 cut(s) 620, 642, 1226, 1250, 2579
AcuI CTGAAG 1 cut(s) 2394
AcyI GRCGYC 2 cut(s) 1689, 2664
AdeI CACNNNGTG 1 cut(s) 686
AfaI GTAC 8 cut(s) 665, 857, 936, 1501, 1522, 1738, 1904, 2315
AflIII ACRYGT 2 cut(s) 246, 2316
AgeI ACCGGT 1 cut(s) 1640
AjiI CACGTC 1 cut(s) 961
AjnI CCWGG 3 cut(s) 605, 1628, 1894
AloI GAACNNNNNNTCC 2 cut(s) 2706, 2738
Alw21I GWGCWC 2 cut(s) 1716, 1886
Alw26I GTCTC 3 cut(s) 671, 1022, 1193
Alw44I GTGCAC 1 cut(s) 1712
AlwI GGATC 6 cut(s) 169, 773, 794, 893, 906, 2372
Ama87I CYCGRG 4 cut(s) 859, 1025, 1334, 1845
Aor13HI TCCGGA 1 cut(s) 802
ApaLI GTGCAC 1 cut(s) 1712
ApeKI GCWGC 6 cut(s) 16, 715, 867, 921, 1757, 2294
ApoI RAATTY 5 cut(s) 620, 642, 1226, 1250, 2579
ArsI GACNNNNNNTTYG 2 cut(s) 2033, 2065
AsiGI ACCGGT 1 cut(s) 1640
Asp700I GAANNNNTTC 1 cut(s) 2690
Asp718I GGTACC 1 cut(s) 1499
AspA2I CCTAGG 1 cut(s) 1051
AspLEI GCGC 5 cut(s) 126, 377, 867, 1778, 1947
AspS9I GGNCC 3 cut(s) 318, 742, 1346
AsuC2I CCSGG 2 cut(s) 1258, 2237
AsuII TTCGAA 1 cut(s) 2492
AsuNHI GCTAGC 1 cut(s) 2029
AvaI CYCGRG 4 cut(s) 859, 1025, 1334, 1845
AvrII CCTAGG 1 cut(s) 1051
BaeGI GKGCMC 2 cut(s) 432, 1716
BalI TGGCCA 2 cut(s) 1312, 2310
BamHI GGATCC 1 cut(s) 898
BanI GGYRCC 1 cut(s) 1499
BanII GRGCYC 1 cut(s) 613
BbsI GAAGAC 2 cut(s) 886, 2046
Bbv12I GWGCWC 2 cut(s) 1716, 1886
BbvCI CCTCAGC 1 cut(s) 1721
BbvI GCAGC 6 cut(s) 3, 702, 854, 933, 1744, 2306
BccI CCATC 9 cut(s) 46, 144, 488, 679, 1166, 1538, 1796, 2054, 2389
BceAI ACGGC 3 cut(s) 583, 595, 2459
BciT130I CCWGG 3 cut(s) 607, 1630, 1896
BclI TGATCA 2 cut(s) 108, 1362
BcnI CCSGG 2 cut(s) 1258, 2237
BcoDI GTCTC 3 cut(s) 671, 1022, 1193
BfaI CTAG 7 cut(s) 189, 825, 1052, 1154, 1298, 2030, 2603
BfmI CTRYAG 6 cut(s) 17, 716, 868, 1539, 1792, 2007
BfoI RGCGCY 3 cut(s) 378, 868, 1948
BfuAI ACCTGC 2 cut(s) 1856, 2273
BglI GCCNNNNNGGC 1 cut(s) 2218
BglII AGATCT 1 cut(s) 1972
BisI GCNGC 8 cut(s) 17, 716, 868, 922, 1758, 1926, 2295, 2568
BlnI CCTAGG 1 cut(s) 1051
BlpI GCTNAGC 1 cut(s) 2013
BlsI GCNGC 8 cut(s) 18, 717, 869, 923, 1759, 1927, 2296, 2569
BmcAI AGTACT 1 cut(s) 1904
Bme1390I CCNGG 5 cut(s) 607, 1258, 1630, 1896, 2237
BmeT110I CYCGRG 4 cut(s) 859, 1025, 1334, 1845
BmgBI CACGTC 1 cut(s) 961
BmgT120I GGNCC 3 cut(s) 318, 742, 1346
BmiI GGNNCC 4 cut(s) 320, 900, 1348, 1501
BmrFI CCNGG 5 cut(s) 607, 1258, 1630, 1896, 2237
BmsI GCATC 5 cut(s) 123, 564, 1624, 1792, 2068
BmtI GCTAGC 1 cut(s) 2033
BpiI GAAGAC 2 cut(s) 886, 2046
BplI GAGNNNNNCTC 4 cut(s) 279, 311, 1839, 1871
BpmI CTGGAG 2 cut(s) 283, 1675
Bpu10I CCTNAGC 2 cut(s) 1110, 1721
Bpu1102I GCTNAGC 1 cut(s) 2013
Bpu14I TTCGAA 1 cut(s) 2492
BpuMI CCSGG 2 cut(s) 1258, 2237
BsaAI YACGTR 1 cut(s) 1474
BsaBI GATNNNNATC 2 cut(s) 113, 545
BsaHI GRCGYC 2 cut(s) 1689, 2664
BsaI GGTCTC 1 cut(s) 1193
BsaWI WCCGGW 4 cut(s) 802, 1640, 1815, 2702
BsaXI ACNNNNNCTCC 3 cut(s) 2649, 2679, 2720
Bse118I RCCGGY 2 cut(s) 1640, 1691
Bse1I ACTGG 6 cut(s) 825, 880, 1126, 1380, 1721, 2311
Bse3DI GCAATG 2 cut(s) 1729, 1785
Bse8I GATNNNNATC 2 cut(s) 113, 545
BseAI TCCGGA 1 cut(s) 802
BseBI CCWGG 3 cut(s) 607, 1630, 1896
BseJI GATNNNNATC 2 cut(s) 113, 545
BseMI GCAATG 2 cut(s) 1729, 1785
BseMII CTCAG 4 cut(s) 26, 1544, 1712, 2004
BseNI ACTGG 6 cut(s) 825, 880, 1126, 1380, 1721, 2311
BseRI GAGGAG 2 cut(s) 151, 2525
BseSI GKGCMC 2 cut(s) 432, 1716
BseXI GCAGC 6 cut(s) 3, 702, 854, 933, 1744, 2306
BseYI CCCAGC 1 cut(s) 484
Bsh1236I CGCG 2 cut(s) 124, 248
Bsh1285I CGRYCG 1 cut(s) 1583
BshNI GGYRCC 1 cut(s) 1499
BshTI ACCGGT 1 cut(s) 1640
BsiEI CGRYCG 1 cut(s) 1583
BsiHKAI GWGCWC 2 cut(s) 1716, 1886
BsiHKCI CYCGRG 4 cut(s) 859, 1025, 1334, 1845
BsiSI CCGG 7 cut(s) 803, 1258, 1641, 1692, 1816, 2237, 2703
BslFI GGGAC 1 cut(s) 1561
BsmAI GTCTC 3 cut(s) 671, 1022, 1193
BsmFI GGGAC 1 cut(s) 1561
Bso31I GGTCTC 1 cut(s) 1193
BsoBI CYCGRG 4 cut(s) 859, 1025, 1334, 1845
Bsp119I TTCGAA 1 cut(s) 2492
Bsp1286I GDGCHC 4 cut(s) 432, 613, 1716, 1886
Bsp13I TCCGGA 1 cut(s) 802
Bsp1407I TGTACA 1 cut(s) 1736
Bsp1720I GCTNAGC 1 cut(s) 2013
Bsp19I CCATGG 1 cut(s) 2213
BspACI CCGC 5 cut(s) 122, 1583, 1926, 2341, 2568
BspCNI CTCAG 4 cut(s) 25, 1545, 1713, 2005
BspEI TCCGGA 1 cut(s) 802
BspFNI CGCG 2 cut(s) 124, 248
BspLI GGNNCC 4 cut(s) 320, 900, 1348, 1501
BspMAI CTGCAG 4 cut(s) 21, 720, 872, 1543
BspMI ACCTGC 2 cut(s) 1856, 2273
BspOI GCTAGC 1 cut(s) 2033
BspPI GGATC 6 cut(s) 169, 773, 794, 893, 906, 2372
BspT104I TTCGAA 1 cut(s) 2492
BspT107I GGYRCC 1 cut(s) 1499
BspTNI GGTCTC 1 cut(s) 1193
BsrDI GCAATG 2 cut(s) 1729, 1785
BsrFI RCCGGY 2 cut(s) 1640, 1691
BsrGI TGTACA 1 cut(s) 1736
BsrI ACTGG 6 cut(s) 825, 880, 1126, 1380, 1721, 2311
BssAI RCCGGY 2 cut(s) 1640, 1691
BssNAI GTATAC 1 cut(s) 1821
BssNI GRCGYC 2 cut(s) 1689, 2664
BssT1I CCWWGG 6 cut(s) 168, 835, 1051, 1148, 1419, 2213
Bst1107I GTATAC 1 cut(s) 1821
Bst2UI CCWGG 3 cut(s) 607, 1630, 1896
Bst6I CTCTTC 2 cut(s) 632, 2591
BstACI GRCGYC 2 cut(s) 1689, 2664
BstAPI GCANNNNNTGC 1 cut(s) 724
BstAUI TGTACA 1 cut(s) 1736
BstBAI YACGTR 1 cut(s) 1474
BstBI TTCGAA 1 cut(s) 2492
BstC8I GCNNGC 7 cut(s) 439, 1649, 1662, 1693, 1968, 2031, 2662
BstDEI CTNAG 7 cut(s) 12, 701, 1110, 1553, 1721, 2013, 2479
BstDSI CCRYGG 2 cut(s) 222, 2213
BstEII GGTNACC 1 cut(s) 2285
BstENI CCTNNNNNAGG 1 cut(s) 1423
BstFNI CGCG 2 cut(s) 124, 248
BstH2I RGCGCY 3 cut(s) 378, 868, 1948
BstHHI GCGC 5 cut(s) 126, 377, 867, 1778, 1947
BstMAI GTCTC 3 cut(s) 671, 1022, 1193
BstMCI CGRYCG 1 cut(s) 1583
BstMWI GCNNNNNNNGC 8 cut(s) 364, 724, 1657, 1688, 1711, 1967, 2218, 2686
BstNI CCWGG 3 cut(s) 607, 1630, 1896
BstNSI RCATGY 2 cut(s) 1010, 2320
BstPI GGTNACC 1 cut(s) 2285
BstSCI CCNGG 5 cut(s) 605, 1256, 1628, 1894, 2235
BstSFI CTRYAG 6 cut(s) 17, 716, 868, 1539, 1792, 2007
BstSLI GKGCMC 2 cut(s) 432, 1716
BstUI CGCG 2 cut(s) 124, 248
BstV1I GCAGC 6 cut(s) 3, 702, 854, 933, 1744, 2306
BstV2I GAAGAC 2 cut(s) 886, 2046
BstX2I RGATCY 4 cut(s) 765, 898, 1972, 2377
BstYI RGATCY 4 cut(s) 765, 898, 1972, 2377
BstZ17I GTATAC 1 cut(s) 1821
BtgI CCRYGG 2 cut(s) 222, 2213
BtrI CACGTC 1 cut(s) 961
BtsI GCAGTG 3 cut(s) 931, 1536, 2304
BveI ACCTGC 2 cut(s) 1856, 2273
Cac8I GCNNGC 7 cut(s) 439, 1649, 1662, 1693, 1968, 2031, 2662
CfoI GCGC 5 cut(s) 126, 377, 867, 1778, 1947
Cfr10I RCCGGY 2 cut(s) 1640, 1691
Cfr13I GGNCC 3 cut(s) 318, 742, 1346
CseI GACGC 2 cut(s) 1697, 2653
Csp6I GTAC 8 cut(s) 664, 856, 935, 1500, 1521, 1737, 1903, 2314
CspAI ACCGGT 1 cut(s) 1640
CspCI CAANNNNNGTGG 4 cut(s) 1849, 1884, 2147, 2182
CviQI GTAC 8 cut(s) 664, 856, 935, 1500, 1521, 1737, 1903, 2314
DdeI CTNAG 7 cut(s) 12, 701, 1110, 1553, 1721, 2013, 2479
DraIII CACNNNGTG 1 cut(s) 686
EaeI YGGCCR 3 cut(s) 1310, 2308, 2472
Eam1104I CTCTTC 2 cut(s) 632, 2591
EarI CTCTTC 2 cut(s) 632, 2591
Eco130I CCWWGG 6 cut(s) 168, 835, 1051, 1148, 1419, 2213
Eco147I AGGCCT 3 cut(s) 829, 1418, 1558
Eco24I GRGCYC 1 cut(s) 613
Eco31I GGTCTC 1 cut(s) 1193
Eco57I CTGAAG 1 cut(s) 2394
Eco88I CYCGRG 4 cut(s) 859, 1025, 1334, 1845
Eco91I GGTNACC 1 cut(s) 2285
EcoNI CCTNNNNNAGG 1 cut(s) 1423
EcoO65I GGTNACC 1 cut(s) 2285
EcoRII CCWGG 3 cut(s) 605, 1628, 1894
EcoT14I CCWWGG 6 cut(s) 168, 835, 1051, 1148, 1419, 2213
EcoT22I ATGCAT 1 cut(s) 1785
EcoT38I GRGCYC 1 cut(s) 613
ErhI CCWWGG 6 cut(s) 168, 835, 1051, 1148, 1419, 2213
FalI AAGNNNNNCTT 2 cut(s) 1601, 1633
FaqI GGGAC 1 cut(s) 1561
FauNDI CATATG 2 cut(s) 2572, 2674
FbaI TGATCA 2 cut(s) 108, 1362
FblI GTMKAC 1 cut(s) 1820
Fnu4HI GCNGC 8 cut(s) 17, 716, 868, 922, 1758, 1926, 2295, 2568
FriOI GRGCYC 1 cut(s) 613
Fsp4HI GCNGC 8 cut(s) 17, 716, 868, 922, 1758, 1926, 2295, 2568
FspBI CTAG 7 cut(s) 189, 825, 1052, 1154, 1298, 2030, 2603
GlaI GCGC 5 cut(s) 125, 376, 866, 1777, 1946
GluI GCNGC 8 cut(s) 17, 716, 868, 922, 1758, 1926, 2295, 2568
GsaI CCCAGC 1 cut(s) 488
GsuI CTGGAG 2 cut(s) 283, 1675
HaeII RGCGCY 3 cut(s) 378, 868, 1948
HapII CCGG 7 cut(s) 803, 1258, 1641, 1692, 1816, 2237, 2703
HgaI GACGC 2 cut(s) 1697, 2653
HhaI GCGC 5 cut(s) 126, 377, 867, 1778, 1947
Hin1I GRCGYC 2 cut(s) 1689, 2664
Hin6I GCGC 5 cut(s) 124, 375, 865, 1776, 1945
HinP1I GCGC 5 cut(s) 124, 375, 865, 1776, 1945
HindIII AAGCTT 2 cut(s) 948, 1959
HpaII CCGG 7 cut(s) 803, 1258, 1641, 1692, 1816, 2237, 2703
Hpy99I CGWCG 1 cut(s) 2669
HpyAV CCTTC 9 cut(s) 52, 128, 412, 1029, 1088, 1378, 1490, 1977, 2600
HpyCH4IV ACGT 4 cut(s) 960, 1103, 1473, 1674
HpyF10VI GCNNNNNNNGC 8 cut(s) 364, 724, 1657, 1688, 1711, 1967, 2218, 2686
HpyF3I CTNAG 7 cut(s) 12, 701, 1110, 1553, 1721, 2013, 2479
HpySE526I ACGT 4 cut(s) 960, 1103, 1473, 1674
Hsp92I GRCGYC 2 cut(s) 1689, 2664
HspAI GCGC 5 cut(s) 124, 375, 865, 1776, 1945
Kpn2I TCCGGA 1 cut(s) 802
KpnI GGTACC 1 cut(s) 1503
KroI GCCGGC 1 cut(s) 1691
KroNI GCCGGC 1 cut(s) 1693
Ksp22I TGATCA 2 cut(s) 108, 1362
LmnI GCTCC 6 cut(s) 40, 364, 506, 712, 1020, 2657
Lsp1109I GCAGC 6 cut(s) 3, 702, 854, 933, 1744, 2306
LweI GCATC 5 cut(s) 123, 564, 1624, 1792, 2068
MaeI CTAG 7 cut(s) 189, 825, 1052, 1154, 1298, 2030, 2603
MaeII ACGT 4 cut(s) 960, 1103, 1473, 1674
MfeI CAATTG 2 cut(s) 2034, 2349
MflI RGATCY 4 cut(s) 765, 898, 1972, 2377
MhlI GDGCHC 4 cut(s) 432, 613, 1716, 1886
MlsI TGGCCA 2 cut(s) 1312, 2310
MluI ACGCGT 1 cut(s) 246
MluNI TGGCCA 2 cut(s) 1312, 2310
MlyI GAGTC 6 cut(s) 307, 1107, 1720, 1881, 2150, 2543
MmeI TCCRAC 5 cut(s) 381, 484, 888, 1649, 2635
Mox20I TGGCCA 2 cut(s) 1312, 2310
Mph1103I ATGCAT 1 cut(s) 1785
MroI TCCGGA 1 cut(s) 802
MroNI GCCGGC 1 cut(s) 1691
MroXI GAANNNNTTC 1 cut(s) 2690
MscI TGGCCA 2 cut(s) 1312, 2310
MseI TTAA 7 cut(s) 69, 87, 332, 588, 1278, 1772, 2085
MslI CAYNNNNRTG 2 cut(s) 447, 2714
Msp20I TGGCCA 2 cut(s) 1312, 2310
MspA1I CMGCKG 3 cut(s) 16, 970, 2012
MspI CCGG 7 cut(s) 803, 1258, 1641, 1692, 1816, 2237, 2703
MspR9I CCNGG 5 cut(s) 607, 1258, 1630, 1896, 2237
MunI CAATTG 2 cut(s) 2034, 2349
MvaI CCWGG 3 cut(s) 607, 1630, 1896
MvnI CGCG 2 cut(s) 124, 248
MwoI GCNNNNNNNGC 8 cut(s) 364, 724, 1657, 1688, 1711, 1967, 2218, 2686
NaeI GCCGGC 1 cut(s) 1693
NciI CCSGG 2 cut(s) 1258, 2237
NcoI CCATGG 1 cut(s) 2213
NdeI CATATG 2 cut(s) 2572, 2674
NgoMIV GCCGGC 1 cut(s) 1691
NheI GCTAGC 1 cut(s) 2029
NlaIV GGNNCC 4 cut(s) 320, 900, 1348, 1501
NmeAIII GCCGAG 2 cut(s) 295, 403
NmuCI GTSAC 7 cut(s) 268, 274, 1099, 1300, 1592, 2285, 2707
NsiI ATGCAT 1 cut(s) 1785
NspI RCATGY 2 cut(s) 1010, 2320
NspV TTCGAA 1 cut(s) 2492
PaeR7I CTCGAG 2 cut(s) 1025, 1845
PaqCI CACCTGC 1 cut(s) 1856
PceI AGGCCT 3 cut(s) 829, 1418, 1558
PciI ACATGT 1 cut(s) 2316
PdiI GCCGGC 1 cut(s) 1693
PdmI GAANNNNTTC 1 cut(s) 2690
PfeI GAWTC 8 cut(s) 707, 1079, 1355, 2003, 2248, 2452, 2494, 2527
PflMI CCANNNNNTGG 2 cut(s) 1121, 2271
PinAI ACCGGT 1 cut(s) 1640
PkrI GCNGC 8 cut(s) 18, 717, 869, 923, 1759, 1927, 2296, 2569
PleI GAGTC 6 cut(s) 307, 1106, 1720, 1880, 2149, 2542
PpsI GAGTC 6 cut(s) 307, 1106, 1720, 1880, 2149, 2542
Ppu21I YACGTR 1 cut(s) 1474
PscI ACATGT 1 cut(s) 2316
Psp6I CCWGG 3 cut(s) 605, 1628, 1894
PspEI GGTNACC 1 cut(s) 2285
PspFI CCCAGC 1 cut(s) 484
PspGI CCWGG 3 cut(s) 605, 1628, 1894
PspN4I GGNNCC 4 cut(s) 320, 900, 1348, 1501
PspPI GGNCC 3 cut(s) 318, 742, 1346
PstI CTGCAG 4 cut(s) 21, 720, 872, 1543
PsuI RGATCY 4 cut(s) 765, 898, 1972, 2377
PvuII CAGCTG 3 cut(s) 16, 970, 2012
RsaI GTAC 8 cut(s) 665, 857, 936, 1501, 1522, 1738, 1904, 2315
RsaNI GTAC 8 cut(s) 664, 856, 935, 1500, 1521, 1737, 1903, 2314
RseI CAYNNNNRTG 2 cut(s) 447, 2714
SaqAI TTAA 7 cut(s) 69, 87, 332, 588, 1278, 1772, 2085
SatI GCNGC 8 cut(s) 17, 716, 868, 922, 1758, 1926, 2295, 2568
Sau96I GGNCC 3 cut(s) 318, 742, 1346
ScaI AGTACT 1 cut(s) 1904
SchI GAGTC 6 cut(s) 307, 1107, 1720, 1881, 2150, 2543
ScrFI CCNGG 5 cut(s) 607, 1258, 1630, 1896, 2237
SduI GDGCHC 4 cut(s) 432, 613, 1716, 1886
SfaNI GCATC 5 cut(s) 123, 564, 1624, 1792, 2068
SfcI CTRYAG 6 cut(s) 17, 716, 868, 1539, 1792, 2007
Sfr274I CTCGAG 2 cut(s) 1025, 1845
SfuI TTCGAA 1 cut(s) 2492
SlaI CTCGAG 2 cut(s) 1025, 1845
SmiMI CAYNNNNRTG 2 cut(s) 447, 2714
SmlI CTYRAG 2 cut(s) 1025, 1845
SmoI CTYRAG 2 cut(s) 1025, 1845
SseBI AGGCCT 3 cut(s) 829, 1418, 1558
SsiI CCGC 5 cut(s) 122, 1583, 1926, 2341, 2568
SspMI CTAG 7 cut(s) 189, 825, 1052, 1154, 1298, 2030, 2603
StuI AGGCCT 3 cut(s) 829, 1418, 1558
StyD4I CCNGG 5 cut(s) 605, 1256, 1628, 1894, 2235
StyI CCWWGG 6 cut(s) 168, 835, 1051, 1148, 1419, 2213
TaiI ACGT 4 cut(s) 963, 1106, 1476, 1677
TaqI TCGA 9 cut(s) 324, 558, 1026, 1293, 1579, 1765, 1846, 2356, 2492
TatI WGTACW 3 cut(s) 1736, 1902, 2313
TauI GCSGC 2 cut(s) 1928, 2570
TfiI GAWTC 8 cut(s) 707, 1079, 1355, 2003, 2248, 2452, 2494, 2527
Tru1I TTAA 7 cut(s) 69, 87, 332, 588, 1278, 1772, 2085
Tru9I TTAA 7 cut(s) 69, 87, 332, 588, 1278, 1772, 2085
TseFI GTSAC 7 cut(s) 268, 274, 1099, 1300, 1592, 2285, 2707
TseI GCWGC 6 cut(s) 16, 715, 867, 921, 1757, 2294
Tsp45I GTSAC 7 cut(s) 268, 274, 1099, 1300, 1592, 2285, 2707
TspDTI ATGAA 5 cut(s) 535, 540, 831, 960, 1260
TspGWI ACGGA 4 cut(s) 167, 251, 585, 1319
Van91I CCANNNNNTGG 2 cut(s) 1121, 2271
VneI GTGCAC 1 cut(s) 1712
XagI CCTNNNNNAGG 1 cut(s) 1423
XapI RAATTY 5 cut(s) 620, 642, 1226, 1250, 2579
XceI RCATGY 2 cut(s) 1010, 2320
XcmI CCANNNNNNNNNTGG 2 cut(s) 397, 2538
XhoI CTCGAG 2 cut(s) 1025, 1845
XmaJI CCTAGG 1 cut(s) 1051
XmiI GTMKAC 1 cut(s) 1820
XmnI GAANNNNTTC 1 cut(s) 2690
XspI CTAG 7 cut(s) 189, 825, 1052, 1154, 1298, 2030, 2603
ZrmI AGTACT 1 cut(s) 1904
Zsp2I ATGCAT 1 cut(s) 1785
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.