RchiOBHm_Chr6g0285041

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
48372014 .. 48374918
2905 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ25565

Sequence Viewer

Length: 1773 bp
ATGCAATTCGTTTTTACAATAGAGACTGGGTTGGAGAAAAAAACAATAAAAGGGTATGCACACAAAGTGAATCAAAAAGAGACGATCGTCACGTATGAGAGTGTGCTGACGATCCCAGTGGGTTTCGGGGATATCAGAGCGGTTCAGGTTGAGAATGAGCACCACGAGGAGGCTTACATCAAGAGTATCGAGATCTCTGGCTTCCCAAATGGCACCTCTGTTAGTGTTCCATGTAATTCATGGACTCATTCCAAGTATGACAATAACCAGAAGAGAATCTTTTTCACCAACAAGTCTTACTTACCATCAGAGACACCAAGTGGGATCAAGAGGCTAAGAGAAGAGGAGCTGCAACTTCTGCGAGGAAATGGCGAGGGTGAAAGGAAAGCATCTGAAGGGATTTATGATTATGATACATACAATGATCTAGGAGACCCAAATAGCAAAGACAAGTTGGCTAGGCCTGTCCTTGGTGGCAAAGACCACCCGTACCCTAGGCGCTGCAGAACTGGACGACCACGCACTAAAAAGGATCCATTATCAGAGGAAAGAAGCAGCAGCGTGTATGTGCCAAGAGATGAAGCGTTTTCAGAGTTGAAACAGCTCACATTCTCTGCAAAGACCCTGAAATCTGTGCTGCATGCATTGCTTCCTCAACTTGAGATAACACTTGTTGATCCAGAGCTAGGATTTCCCTACTTCACAGCCATAGATTCATTGTTCAATGAAGGAGTCACATTGCCTAAGCCAAAAGCTAGTGGCTTTATTCAGTCAATCATCCCAAGGCTAGTCAAGGCAATTAGCGATGGACAAGATGATCTCTTGCTCTTTGAGACCCCTGAAATACTTGATCGTGATAAATTTTCTTGGTTCAAAGATGAAGAATTTTCTAGGCAAACTCTAGTTGGTCTTAATCCATATAGCATAGAGCTAGTTACGGAATGGCCATTGAAAAGTAAACTTGACCCCGAGATTTATGGCCCAGCTGAATCATTGATCACCACAAAACTGGTGGAGAAGGAAATCAGAGGCTTTATGACTGTCAATGAGGCCTTAAAAAGAAAGAAGCTCTTTATTTTGGATTATCATGATCTGCTCATGCCTTATGTGAGCAAAGTGAGAGAGGTTGAAGGAACCACACTGTATGGTTCTCGAACACTTTTCTTCCTCACTGAGAATGGCACACTAAGGCCTGTTGTTATTGAACTCACTCGACCACCCATTGATGACAAGCCCCAATGGAAGGAAGTGTCTACCCCAACATGGGGCCACTGGCTGAGGACTCATTGTTGTACAGAACCATACATAATTGCAGCTAATCAACAACTAAGTGCAATGCATCCCATCTATAGGCTTCTACATCCTCATTTCCGTTATACAATGGAAATCAATGCTCTGGCTCGAGAAAGCCTCATTAATGCAGGTGGAGCCATTGAGACCTGCTTCTCACCAGCAAAGTACTCAATTGAGCTCAGTTCTGCTGCTTACAATAAGCTTTGGCACTTTGACATGGAAGCTTTGCTTGCAGATCTAATCAGAAGGGGAATGGCAGTTGAGGATTCTACAGCTGAGCATGGTGTGAAGCTAACAATTGAAGACTACCCATTTGCAAATGATGGTCTCATTTTGTGGGATGCCATTAAGGAGTGGGTGGGTGACTATGTGAACCACTATTATCCAGTCCCAACCCTTGTTGAATCTGATAACGAGCTTCAAGCTTGGTGGACAGAAGTTAGAACGGAAGGCCATGCAGACAAAAAAGATGAACCATAG

Protein Analysis

590

Amino Acids

67.43

Weight (kDa)

5.53

Isoelectric Point (pI)

42.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 24 - 95 2e-06 PLAT/LH2 domain
Lipoxygenase PF00305 108 - 421 8.3e-123 Lipoxygenase
Lipoxygenase PF00305 424 - 590 5.6e-93 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000211)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45140 AT3G45140
fragaria_vesca FvH4_3g43530 FvH4_3g43540 FvH4_3g43540 FvH4_5g05680 FvH4_5g26250 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00380 FvH4_7g00420 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440 FvH4_7g00440
malus_domestica MD02G1317800.v1.1 MD03G1021200.v1.1 MD07G1003600.v1.1 MD07G1003700.v1.1 MD07G1003900.v1.1 MD07G1004500.v1.1 MD11G1023100.v1.1
prunus_persica Prupe.2G005300_v2.0.a1 Prupe.2G005300_v2.0.a1 Prupe.2G005500_v2.0.a1 Prupe.2G005800_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1 Prupe.6G018700_v2.0.a1
pyrus_communis pycom02g26570 pycom02g26590 pycom02g26600 pycom07g00350 pycom11g01870
rosa_chinensis RchiOBHm_Chr1g0314111 RchiOBHm_Chr1g0314131 RchiOBHm_Chr1g0314151 RchiOBHm_Chr5g0078061 RchiOBHm_Chr5g0078091 RchiOBHm_Chr6g0285041 RchiOBHm_Chr6g0285051 RchiOBHm_Chr7g0216951
rosa_laevigata RLG00000002519 RLG00000002520 RLG00000002523 RLG00000002524 RLG00000002526 RLG00000012683 RLG00000030702 RLG00000030773 RLG00000030774 RLG00000030775 RLG00000036743 RLG00000036744 RLG00000036746 RLG00000036748
rosa_multiflora Rmu_co8050096.1_g000001 Rmu_co8091784.1_g000001 Rmu_co8342063.1_g000001 Rmu_co8353481.1_g000001 Rmu_co8390647.1_g000001 Rmu_sc0000670.1_g000032 Rmu_sc0000854.1_g000025 Rmu_sc0002478.1_g000009 Rmu_sc0004992.1_g000003 Rmu_sc0006851.1_g000003 Rmu_sc0009311.1_g000001 Rmu_sc0009311.1_g000005 Rmu_ssc0000154.1_g000036 Rmu_ssc0000154.1_g000041
rosa_roxburghii Rroxscaffold_1G00000310 Rroxscaffold_1G00000320 Rroxscaffold_1G00000330 Rroxscaffold_1G00000340 Rroxscaffold_1G00004130 Rroxscaffold_1G00004190 Rroxscaffold_3G00242690 Rroxscaffold_3G00242700 Rroxscaffold_3G00242710 Rroxscaffold_3G00242720 Rroxscaffold_3G00242740 Rroxscaffold_4G00332030 Rroxscaffold_4G00332050 Rroxscaffold_4G00332060 Rroxscaffold_6G00427990 Rroxscaffold_7G00183800 Rroxscaffold_7G00184080
rosa_rugosa Rorug01G0000100 Rorug01G0000200 Rorug01G0130400 Rorug05G0458200 Rorug05G0458300 Rorug05G0458400 Rorug06G0170200 Rorug07G0164500 RorugPtG0006300 RorugPtG0006400 RorugPtG0006500
rosa_samantha Rh1AG008700 Rh1AG008800 Rh1BG002100 Rh1BG002200 Rh1BG002700 Rh1BG012600 Rh1BG012900 Rh1BG120700 Rh1DG004500 Rh1DG004600 Rh1DG004700 Rh1DG004800 Rh1DG013000 Rh5BG535400 Rh5CG558800 Rh5DG547500 Rh5DG547600 Rh6AG281900 Rh6BG282500 Rh6CG284200 Rh6CG284300 Rh6CG284400 Rh6DG277500 Rh6DG277600 Rh7AG304700 Rh7BG296300 Rh7CG323200 Rh7CG323300 Rh7CG323400 Rh7CG323500 Rh7CG323800 Rh7DG304900
rosa_wichuraiana Rw1G000380 Rw1G000390 Rw1G000400 Rw5G047570 Rw5G047580 Rw6G024220 Rw7G025870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1412
Acc36I ACCTGC 2 cut(s) 1412, 1448
AccB1I GGYRCC 1 cut(s) 212
AccBSI CCGCTC 1 cut(s) 140
AccI GTMKAC 1 cut(s) 1253
AciI CCGC 1 cut(s) 140
AclWI GGATC 5 cut(s) 106, 332, 527, 540, 671
AcoI YGGCCR 1 cut(s) 944
AcsI RAATTY 2 cut(s) 860, 884
AcuI CTGAAG 1 cut(s) 414
AdeI CACNNNGTG 2 cut(s) 67, 320
AfaI GTAC 3 cut(s) 491, 1294, 1460
AfiI CCNNNNNNNGG 8 cut(s) 169, 470, 686, 1243, 1263, 1264, 1265, 1350
AgsI TTSAA 9 cut(s) 598, 724, 874, 952, 1130, 1205, 1595, 1697, 1715
Alw21I GWGCWC 2 cut(s) 162, 1473
Alw26I GTCTC 7 cut(s) 17, 74, 305, 426, 827, 1430, 1625
AlwI GGATC 5 cut(s) 106, 332, 527, 540, 671
Ama87I CYCGRG 2 cut(s) 968, 1401
AoxI GGCC 7 cut(s) 461, 944, 979, 1050, 1190, 1267, 1744
ApeKI GCWGC 7 cut(s) 349, 501, 555, 558, 637, 1313, 1481
ApoI RAATTY 2 cut(s) 860, 884
ArsI GACNNNNNNTTYG 2 cut(s) 1589, 1621
AseI ATTAAT 1 cut(s) 1416
AspA2I CCTAGG 1 cut(s) 494
AspLEI GCGC 1 cut(s) 501
AspS9I GGNCC 2 cut(s) 980, 1267
AsuHPI GGTGA 5 cut(s) 277, 389, 991, 1440, 1667
AvaI CYCGRG 2 cut(s) 968, 1401
AvrII CCTAGG 1 cut(s) 494
BalI TGGCCA 1 cut(s) 946
BamHI GGATCC 1 cut(s) 532
BanI GGYRCC 1 cut(s) 212
BanII GRGCYC 1 cut(s) 1473
BauI CACGAG 1 cut(s) 164
BbsI GAAGAC 1 cut(s) 1602
Bbv12I GWGCWC 2 cut(s) 162, 1473
BbvCI CCTCAGC 1 cut(s) 1277
BbvI GCAGC 7 cut(s) 336, 488, 567, 570, 624, 1325, 1468
BccI CCATC 4 cut(s) 313, 800, 1352, 1610
BclI TGATCA 1 cut(s) 996
BcoDI GTCTC 7 cut(s) 17, 74, 305, 426, 827, 1430, 1625
BfaI CTAG 9 cut(s) 428, 459, 495, 686, 756, 788, 891, 902, 932
BfmI CTRYAG 3 cut(s) 502, 1348, 1563
BfoI RGCGCY 1 cut(s) 502
BfuAI ACCTGC 2 cut(s) 1412, 1448
BglII AGATCT 2 cut(s) 192, 1528
BisI GCNGC 7 cut(s) 350, 502, 556, 559, 638, 1314, 1482
BlnI CCTAGG 1 cut(s) 494
BlpI GCTNAGC 1 cut(s) 1569
BlsI GCNGC 7 cut(s) 351, 503, 557, 560, 639, 1315, 1483
BmcAI AGTACT 1 cut(s) 1460
BmeT110I CYCGRG 2 cut(s) 968, 1401
BmgT120I GGNCC 2 cut(s) 980, 1267
BmiI GGNNCC 5 cut(s) 214, 534, 1135, 1268, 1429
BmrI ACTGGG 2 cut(s) 36, 110
BmsI GCATC 3 cut(s) 398, 1348, 1624
BmuI ACTGGG 2 cut(s) 36, 110
BoxI GACNNNNGTC 1 cut(s) 86
BpiI GAAGAC 1 cut(s) 1602
BplI GAGNNNNNCTC 2 cut(s) 1395, 1427
Bpu10I CCTNAGC 2 cut(s) 744, 1277
Bpu1102I GCTNAGC 1 cut(s) 1569
BpuEI CTTGAG 1 cut(s) 680
BsaAI YACGTR 1 cut(s) 93
BsaI GGTCTC 4 cut(s) 426, 827, 1430, 1625
BsaJI CCNNGG 3 cut(s) 469, 494, 782
Bsc4I CCNNNNNNNGG 8 cut(s) 169, 470, 686, 1243, 1263, 1264, 1265, 1350
Bse1I ACTGG 6 cut(s) 31, 116, 514, 1014, 1277, 1679
Bse3DI GCAATG 3 cut(s) 644, 737, 1341
BseDI CCNNGG 3 cut(s) 469, 494, 782
BseGI GGATG 4 cut(s) 777, 1339, 1360, 1639
BseLI CCNNNNNNNGG 8 cut(s) 169, 470, 686, 1243, 1263, 1264, 1265, 1350
BseMI GCAATG 3 cut(s) 644, 737, 1341
BseMII CTCAG 4 cut(s) 1164, 1268, 1486, 1560
BseNI ACTGG 6 cut(s) 31, 116, 514, 1014, 1277, 1679
BseRI GAGGAG 2 cut(s) 182, 359
BseXI GCAGC 7 cut(s) 336, 488, 567, 570, 624, 1325, 1468
BseYI CCCAGC 1 cut(s) 982
Bsh1285I CGRYCG 1 cut(s) 87
BshFI GGCC 7 cut(s) 463, 946, 981, 1052, 1192, 1269, 1746
BshNI GGYRCC 1 cut(s) 212
BsiEI CGRYCG 1 cut(s) 87
BsiHKAI GWGCWC 2 cut(s) 162, 1473
BsiHKCI CYCGRG 2 cut(s) 968, 1401
BslFI GGGAC 1 cut(s) 1667
BslI CCNNNNNNNGG 8 cut(s) 169, 470, 686, 1243, 1263, 1264, 1265, 1350
BsmAI GTCTC 7 cut(s) 17, 74, 305, 426, 827, 1430, 1625
BsmBI CGTCTC 1 cut(s) 74
BsmFI GGGAC 1 cut(s) 1667
BsnI GGCC 7 cut(s) 463, 946, 981, 1052, 1192, 1269, 1746
Bso31I GGTCTC 4 cut(s) 426, 827, 1430, 1625
BsoBI CYCGRG 2 cut(s) 968, 1401
Bsp1286I GDGCHC 2 cut(s) 162, 1473
Bsp1407I TGTACA 1 cut(s) 1292
Bsp1720I GCTNAGC 1 cut(s) 1569
BspACI CCGC 1 cut(s) 140
BspANI GGCC 7 cut(s) 463, 946, 981, 1052, 1192, 1269, 1746
BspCNI CTCAG 4 cut(s) 1165, 1269, 1485, 1561
BspHI TCATGA 1 cut(s) 1087
BspLI GGNNCC 5 cut(s) 214, 534, 1135, 1268, 1429
BspMAI CTGCAG 1 cut(s) 506
BspMI ACCTGC 2 cut(s) 1412, 1448
BspPI GGATC 5 cut(s) 106, 332, 527, 540, 671
BspT107I GGYRCC 1 cut(s) 212
BspTNI GGTCTC 4 cut(s) 426, 827, 1430, 1625
BsrBI CCGCTC 1 cut(s) 140
BsrDI GCAATG 3 cut(s) 644, 737, 1341
BsrGI TGTACA 1 cut(s) 1292
BsrI ACTGG 6 cut(s) 31, 116, 514, 1014, 1277, 1679
BssECI CCNNGG 3 cut(s) 469, 494, 782
BssSI CACGAG 1 cut(s) 164
BssT1I CCWWGG 3 cut(s) 469, 494, 782
Bst2BI CACGAG 1 cut(s) 164
Bst4CI ACNGT 2 cut(s) 1042, 1143
Bst6I CTCTTC 2 cut(s) 266, 336
BstAPI GCANNNNNTGC 2 cut(s) 358, 646
BstAUI TGTACA 1 cut(s) 1292
BstBAI YACGTR 1 cut(s) 93
BstC8I GCNNGC 2 cut(s) 642, 1524
BstDEI CTNAG 8 cut(s) 335, 744, 1173, 1187, 1277, 1328, 1472, 1569
BstF5I GGATG 4 cut(s) 777, 1339, 1360, 1639
BstH2I RGCGCY 1 cut(s) 502
BstHHI GCGC 1 cut(s) 501
BstMAI GTCTC 7 cut(s) 17, 74, 305, 426, 827, 1430, 1625
BstMCI CGRYCG 1 cut(s) 87
BstMWI GCNNNNNNNGC 4 cut(s) 358, 646, 1427, 1523
BstNSI RCATGY 1 cut(s) 644
BstPAI GACNNNNGTC 1 cut(s) 86
BstSFI CTRYAG 3 cut(s) 502, 1348, 1563
BstV1I GCAGC 7 cut(s) 336, 488, 567, 570, 624, 1325, 1468
BstV2I GAAGAC 1 cut(s) 1602
BstX2I RGATCY 3 cut(s) 192, 532, 1528
BstXI CCANNNNNNTGG 1 cut(s) 1009
BstYI RGATCY 3 cut(s) 192, 532, 1528
BsuRI GGCC 7 cut(s) 463, 946, 981, 1052, 1192, 1269, 1746
BtgZI GCGATG 1 cut(s) 819
BtsCI GGATG 4 cut(s) 777, 1339, 1360, 1639
BtsIMutI CAGTG 4 cut(s) 123, 1139, 1170, 1270
BveI ACCTGC 2 cut(s) 1412, 1448
Cac8I GCNNGC 2 cut(s) 642, 1524
CciI TCATGA 1 cut(s) 1087
CfoI GCGC 1 cut(s) 501
Cfr13I GGNCC 2 cut(s) 980, 1267
Csp6I GTAC 3 cut(s) 490, 1293, 1459
CspCI CAANNNNNGTGG 4 cut(s) 993, 1028, 1703, 1738
CviAII CATG 9 cut(s) 231, 240, 641, 1088, 1099, 1263, 1510, 1574, 1748
CviQI GTAC 3 cut(s) 490, 1293, 1459
DdeI CTNAG 8 cut(s) 335, 744, 1173, 1187, 1277, 1328, 1472, 1569
DraIII CACNNNGTG 2 cut(s) 67, 320
EaeI YGGCCR 1 cut(s) 944
Eam1104I CTCTTC 2 cut(s) 266, 336
EarI CTCTTC 2 cut(s) 266, 336
Ecl136II GAGCTC 1 cut(s) 1471
Eco130I CCWWGG 3 cut(s) 469, 494, 782
Eco147I AGGCCT 3 cut(s) 463, 1052, 1192
Eco24I GRGCYC 1 cut(s) 1473
Eco31I GGTCTC 4 cut(s) 426, 827, 1430, 1625
Eco32I GATATC 1 cut(s) 133
Eco53kI GAGCTC 1 cut(s) 1471
Eco57I CTGAAG 1 cut(s) 414
Eco88I CYCGRG 2 cut(s) 968, 1401
EcoICRI GAGCTC 1 cut(s) 1471
EcoRV GATATC 1 cut(s) 133
EcoT14I CCWWGG 3 cut(s) 469, 494, 782
EcoT22I ATGCAT 2 cut(s) 646, 1341
EcoT38I GRGCYC 1 cut(s) 1473
ErhI CCWWGG 3 cut(s) 469, 494, 782
Esp3I CGTCTC 1 cut(s) 74
FaeI CATG 9 cut(s) 234, 243, 644, 1091, 1102, 1266, 1513, 1577, 1751
FalI AAGNNNNNCTT 8 cut(s) 263, 295, 284, 316, 1055, 1087, 1506, 1538
FaqI GGGAC 1 cut(s) 1667
FatI CATG 9 cut(s) 230, 239, 640, 1087, 1098, 1262, 1509, 1573, 1747
FbaI TGATCA 1 cut(s) 996
FblI GTMKAC 1 cut(s) 1253
Fnu4HI GCNGC 7 cut(s) 350, 502, 556, 559, 638, 1314, 1482
FokI GGATG 4 cut(s) 764, 1326, 1347, 1646
FriOI GRGCYC 1 cut(s) 1473
Fsp4HI GCNGC 7 cut(s) 350, 502, 556, 559, 638, 1314, 1482
FspBI CTAG 9 cut(s) 428, 459, 495, 686, 756, 788, 891, 902, 932
GlaI GCGC 1 cut(s) 500
GluI GCNGC 7 cut(s) 350, 502, 556, 559, 638, 1314, 1482
GsaI CCCAGC 1 cut(s) 986
HaeII RGCGCY 1 cut(s) 502
HaeIII GGCC 7 cut(s) 463, 946, 981, 1052, 1192, 1269, 1746
HhaI GCGC 1 cut(s) 501
Hin1II CATG 9 cut(s) 234, 243, 644, 1091, 1102, 1266, 1513, 1577, 1751
Hin6I GCGC 1 cut(s) 499
HinP1I GCGC 1 cut(s) 499
HindIII AAGCTT 3 cut(s) 1493, 1515, 1716
HinfI GANTC 9 cut(s) 70, 244, 276, 713, 732, 989, 1282, 1559, 1697
HphI GGTGA 5 cut(s) 277, 389, 991, 1440, 1667
Hpy166II GTNNAC 4 cut(s) 959, 1254, 1666, 1725
Hpy188I TCNGA 8 cut(s) 137, 310, 394, 544, 592, 1028, 1538, 1702
Hpy188III TCNNGA 8 cut(s) 181, 190, 328, 680, 854, 1088, 1152, 1403
Hpy8I GTNNAC 4 cut(s) 959, 1254, 1666, 1725
HpyAV CCTTC 7 cut(s) 389, 722, 1012, 1124, 1237, 1533, 1736
HpyCH4III ACNGT 2 cut(s) 1042, 1143
HpyCH4IV ACGT 1 cut(s) 92
HpyF10VI GCNNNNNNNGC 4 cut(s) 358, 646, 1427, 1523
HpyF3I CTNAG 8 cut(s) 335, 744, 1173, 1187, 1277, 1328, 1472, 1569
HpySE526I ACGT 1 cut(s) 92
Hsp92II CATG 9 cut(s) 234, 243, 644, 1091, 1102, 1266, 1513, 1577, 1751
HspAI GCGC 1 cut(s) 499
Ksp22I TGATCA 1 cut(s) 996
LmnI GCTCC 2 cut(s) 346, 1427
Lsp1109I GCAGC 7 cut(s) 336, 488, 567, 570, 624, 1325, 1468
LweI GCATC 3 cut(s) 398, 1348, 1624
MaeI CTAG 9 cut(s) 428, 459, 495, 686, 756, 788, 891, 902, 932
MaeII ACGT 1 cut(s) 92
MaeIII GTNAC 4 cut(s) 88, 733, 934, 1655
MbiI CCGCTC 1 cut(s) 140
MboII GAAGA 5 cut(s) 283, 353, 893, 1156, 1607
MfeI CAATTG 2 cut(s) 1464, 1590
MflI RGATCY 3 cut(s) 192, 532, 1528
MhlI GDGCHC 2 cut(s) 162, 1473
MlsI TGGCCA 1 cut(s) 946
MluCI AATT 8 cut(s) 5, 235, 798, 860, 884, 1308, 1464, 1590
MluNI TGGCCA 1 cut(s) 946
MlyI GAGTC 3 cut(s) 238, 741, 1276
MmeI TCCRAC 1 cut(s) 12
Mox20I TGGCCA 1 cut(s) 946
Mph1103I ATGCAT 2 cut(s) 646, 1341
MscI TGGCCA 1 cut(s) 946
MseI TTAA 4 cut(s) 912, 1055, 1416, 1641
Msp20I TGGCCA 1 cut(s) 946
MspA1I CMGCKG 2 cut(s) 986, 1568
MunI CAATTG 2 cut(s) 1464, 1590
MwoI GCNNNNNNNGC 4 cut(s) 358, 646, 1427, 1523
NlaIII CATG 9 cut(s) 234, 243, 644, 1091, 1102, 1266, 1513, 1577, 1751
NlaIV GGNNCC 5 cut(s) 214, 534, 1135, 1268, 1429
NmuCI GTSAC 3 cut(s) 88, 733, 1655
NsiI ATGCAT 2 cut(s) 646, 1341
NspI RCATGY 1 cut(s) 644
PaeI GCATGC 1 cut(s) 644
PaeR7I CTCGAG 1 cut(s) 1401
PagI TCATGA 1 cut(s) 1087
PaqCI CACCTGC 1 cut(s) 1412
PceI AGGCCT 3 cut(s) 463, 1052, 1192
PcsI WCGNNNNNNNCGW 1 cut(s) 89
PfeI GAWTC 6 cut(s) 70, 276, 713, 989, 1559, 1697
PkrI GCNGC 7 cut(s) 351, 503, 557, 560, 639, 1315, 1483
Ple19I CGATCG 1 cut(s) 87
PleI GAGTC 3 cut(s) 238, 740, 1276
PpsI GAGTC 3 cut(s) 238, 740, 1276
Ppu21I YACGTR 1 cut(s) 93
PshAI GACNNNNGTC 1 cut(s) 86
PshBI ATTAAT 1 cut(s) 1416
Psp124BI GAGCTC 1 cut(s) 1473
PspFI CCCAGC 1 cut(s) 982
PspN4I GGNNCC 5 cut(s) 214, 534, 1135, 1268, 1429
PspPI GGNCC 2 cut(s) 980, 1267
PstI CTGCAG 1 cut(s) 506
PsuI RGATCY 3 cut(s) 192, 532, 1528
PvuI CGATCG 1 cut(s) 87
PvuII CAGCTG 2 cut(s) 986, 1568
RsaI GTAC 3 cut(s) 491, 1294, 1460
RsaNI GTAC 3 cut(s) 490, 1293, 1459
SacI GAGCTC 1 cut(s) 1473
SaqAI TTAA 4 cut(s) 912, 1055, 1416, 1641
SatI GCNGC 7 cut(s) 350, 502, 556, 559, 638, 1314, 1482
Sau96I GGNCC 2 cut(s) 980, 1267
ScaI AGTACT 1 cut(s) 1460
SchI GAGTC 3 cut(s) 238, 741, 1276
SduI GDGCHC 2 cut(s) 162, 1473
SfaNI GCATC 3 cut(s) 398, 1348, 1624
SfcI CTRYAG 3 cut(s) 502, 1348, 1563
Sfr274I CTCGAG 1 cut(s) 1401
SlaI CTCGAG 1 cut(s) 1401
SmlI CTYRAG 2 cut(s) 659, 1401
SmoI CTYRAG 2 cut(s) 659, 1401
SphI GCATGC 1 cut(s) 644
Sse9I AATT 8 cut(s) 5, 235, 798, 860, 884, 1308, 1464, 1590
SseBI AGGCCT 3 cut(s) 463, 1052, 1192
SsiI CCGC 1 cut(s) 140
SspMI CTAG 9 cut(s) 428, 459, 495, 686, 756, 788, 891, 902, 932
SstI GAGCTC 1 cut(s) 1473
StuI AGGCCT 3 cut(s) 463, 1052, 1192
StyI CCWWGG 3 cut(s) 469, 494, 782
TaaI ACNGT 2 cut(s) 1042, 1143
TaiI ACGT 1 cut(s) 95
TaqI TCGA 4 cut(s) 189, 1153, 1213, 1402
TasI AATT 8 cut(s) 5, 235, 798, 860, 884, 1308, 1464, 1590
TatI WGTACW 2 cut(s) 1292, 1458
TfiI GAWTC 6 cut(s) 70, 276, 713, 989, 1559, 1697
Tru1I TTAA 4 cut(s) 912, 1055, 1416, 1641
Tru9I TTAA 4 cut(s) 912, 1055, 1416, 1641
TscAI CASTG 4 cut(s) 123, 1146, 1177, 1277
TseFI GTSAC 3 cut(s) 88, 733, 1655
TseI GCWGC 7 cut(s) 349, 501, 555, 558, 637, 1313, 1481
Tsp45I GTSAC 3 cut(s) 88, 733, 1655
TspDTI ATGAA 5 cut(s) 228, 594, 705, 741, 894
TspGWI ACGGA 3 cut(s) 953, 1361, 1754
TspRI CASTG 4 cut(s) 123, 1146, 1177, 1277
VspI ATTAAT 1 cut(s) 1416
XapI RAATTY 2 cut(s) 860, 884
XceI RCATGY 1 cut(s) 644
XcmI CCANNNNNNNNNTGG 2 cut(s) 237, 1009
XhoI CTCGAG 1 cut(s) 1401
XmaJI CCTAGG 1 cut(s) 494
XmiI GTMKAC 1 cut(s) 1253
XspI CTAG 9 cut(s) 428, 459, 495, 686, 756, 788, 891, 902, 932
ZrmI AGTACT 1 cut(s) 1460
Zsp2I ATGCAT 2 cut(s) 646, 1341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.