Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002764

Physical Location & Seq

Genomic Coordinates Forward (+)

27105548 .. 27107505

Gene Structure 1958 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G262500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 390 bp

ATGACTTTCAAGCGCCGGAATGGTGGTCGCAACAAGCACGGCCGTGGACACGTCAAGTTCATCCGCTGCTCTAACTGCGGCAAGTGCTGCCCTAAGGACAAGGCCATCAAGAGGTTCTTGGTGAGGAACATTGTTGAGCAAGCTGCGGTTAGAGATGTCCAGGAAGCTTGTGTCTATGAGCAATACACCCTGCCAAAATTGTATGCCAAGATGCAGTACTGCGTTTCCTGCGCAATTCACTCTCACGTTGTGAGGGTGCGATCTCGCACCAACAGGAGGAACCGTGAGCCACCACAGCGATTCATCAGACGCAGGGATGATGCCCCAAGGCCTGGTCAGCCTGGCCAAGGTCCTCGACCTGCTGGTGCCCCTGTTCCTGCTCGTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005911 GO:0009506 GO:0009507 GO:0009536 GO:0015935 GO:0016020 GO:0022626 GO:0022627 GO:0030054 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0055044 GO:0097159 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03010 map03010

Pfam Domains

Protein Families

Ribosomal_S26e

Protein Analysis

130

Amino Acids

14.83

Weight (kDa)

11.05

Isoelectric Point (pI)

69.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002764)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40510 AT2G40590 AT3G56340
fragaria_vesca	FvH4_3g40340 FvH4_7g25731
malus_domestica	MD01G1164800.v1.1 MD03G1053100.v1.1 MD07G1232300.v1.1 MD11G1054800.v1.1
prunus_persica	Prupe.2G262500_v2.0.a1 Prupe.6G042400_v2.0.a1 Prupe.6G042400_v2.0.a1
pyrus_communis	pycom01g17890 pycom03g04220 pycom07g21010 pycom11g04470
rosa_chinensis	RchiOBHm_Chr1g0371981 RchiOBHm_Chr5g0072701 RchiOBHm_Chr7g0216781
rosa_laevigata	RLG00000026931 RLG00000036326
rosa_multiflora	Rmu_sc0001755.1_g000039 Rmu_sc0003160.1_g000033
rosa_roxburghii	Rroxscaffold_1G00008450 Rroxscaffold_4G00285340
rosa_rugosa	Rorug01G0367600 Rorug05G0419400
rosa_samantha	Rh1AG377400 Rh1BG340800 Rh1CG353900 Rh1DG371700 Rh5AG476300 Rh5BG496500 Rh5CG520300 Rh5DG508900 Rh7AG302300 Rh7BG294300 Rh7CG321000
rosa_wichuraiana	Rw5G044230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	232
Acc36I	ACCTGC	1 cut(s)	367
AccB1I	GGYRCC	1 cut(s)	365
AccB7I	CCANNNNNTGG	1 cut(s)	332
AciI	CCGC	3 cut(s)	64, 78, 146
AcoI	YGGCCR	2 cut(s)	40, 343
AdeI	CACNNNGTG	1 cut(s)	250
AfaI	GTAC	2 cut(s)	218, 385
AfiI	CCNNNNNNNGG	4 cut(s)	111, 276, 332, 347
AflIII	ACRYGT	1 cut(s)	49
AgsI	TTSAA	1 cut(s)	10
AjiI	CACGTC	1 cut(s)	52
AjnI	CCWGG	3 cut(s)	159, 331, 340
AleI	CACNNNNGTG	1 cut(s)	42
AluBI	AGCT	2 cut(s)	143, 167
AluI	AGCT	2 cut(s)	143, 167
AoxI	GGCC	4 cut(s)	40, 102, 329, 343
ApeKI	GCWGC	3 cut(s)	66, 87, 143
AspLEI	GCGC	2 cut(s)	15, 233
AspS9I	GGNCC	1 cut(s)	350
AsuHPI	GGTGA	1 cut(s)	133
AvaII	GGWCC	1 cut(s)	350
AxyI	CCTNAGG	1 cut(s)	93
BaeGI	GKGCMC	1 cut(s)	370
BalI	TGGCCA	1 cut(s)	345
BanI	GGYRCC	1 cut(s)	365
BbvI	GCAGC	3 cut(s)	53, 74, 130
BccI	CCATC	1 cut(s)	113
BceAI	ACGGC	2 cut(s)	27, 55
BciT130I	CCWGG	3 cut(s)	161, 333, 342
BfoI	RGCGCY	1 cut(s)	16
BfuAI	ACCTGC	1 cut(s)	367
BisI	GCNGC	4 cut(s)	67, 79, 88, 144
BlsI	GCNGC	4 cut(s)	68, 80, 89, 145
BmcAI	AGTACT	1 cut(s)	218
Bme1390I	CCNGG	3 cut(s)	161, 333, 342
Bme18I	GGWCC	1 cut(s)	350
BmgBI	CACGTC	1 cut(s)	52
BmgT120I	GGNCC	1 cut(s)	350
BmiI	GGNNCC	2 cut(s)	281, 367
BmrFI	CCNGG	3 cut(s)	161, 333, 342
BmsI	GCATC	2 cut(s)	201, 310
BsaJI	CCNNGG	3 cut(s)	43, 326, 346
BsaXI	ACNNNNNCTCC	2 cut(s)	268, 298
Bsc4I	CCNNNNNNNGG	4 cut(s)	111, 276, 332, 347
Bse21I	CCTNAGG	1 cut(s)	93
BseBI	CCWGG	3 cut(s)	161, 333, 342
BseDI	CCNNGG	3 cut(s)	43, 326, 346
BseGI	GGATG	2 cut(s)	60, 322
BseLI	CCNNNNNNNGG	4 cut(s)	111, 276, 332, 347
BseSI	GKGCMC	1 cut(s)	370
BseX3I	CGGCCG	1 cut(s)	40
BseXI	GCAGC	3 cut(s)	53, 74, 130
Bsh1285I	CGRYCG	1 cut(s)	43
BshFI	GGCC	4 cut(s)	42, 104, 331, 345
BshNI	GGYRCC	1 cut(s)	365
BsiEI	CGRYCG	1 cut(s)	43
BsiSI	CCGG	1 cut(s)	16
BslI	CCNNNNNNNGG	4 cut(s)	111, 276, 332, 347
BsnI	GGCC	4 cut(s)	42, 104, 331, 345
Bsp1286I	GDGCHC	1 cut(s)	370
Bsp143I	GATC	1 cut(s)	260
BspACI	CCGC	3 cut(s)	64, 78, 146
BspANI	GGCC	4 cut(s)	42, 104, 331, 345
BspLI	GGNNCC	2 cut(s)	281, 367
BspMI	ACCTGC	1 cut(s)	367
BspT107I	GGYRCC	1 cut(s)	365
BssECI	CCNNGG	3 cut(s)	43, 326, 346
BssMI	GATC	1 cut(s)	260
BssT1I	CCWWGG	2 cut(s)	326, 346
Bst2UI	CCWGG	3 cut(s)	161, 333, 342
Bst4CI	ACNGT	1 cut(s)	284
BstAPI	GCANNNNNTGC	1 cut(s)	87
BstC8I	GCNNGC	1 cut(s)	141
BstDEI	CTNAG	1 cut(s)	93
BstDSI	CCRYGG	1 cut(s)	43
BstENI	CCTNNNNNAGG	1 cut(s)	345
BstF5I	GGATG	2 cut(s)	60, 322
BstH2I	RGCGCY	1 cut(s)	16
BstHHI	GCGC	2 cut(s)	15, 233
BstKTI	GATC	1 cut(s)	263
BstMBI	GATC	1 cut(s)	260
BstMCI	CGRYCG	1 cut(s)	43
BstMWI	GCNNNNNNNGC	6 cut(s)	75, 84, 87, 228, 295, 337
BstNI	CCWGG	3 cut(s)	161, 333, 342
BstSCI	CCNGG	3 cut(s)	159, 331, 340
BstSLI	GKGCMC	1 cut(s)	370
BstV1I	GCAGC	3 cut(s)	53, 74, 130
BstZI	CGGCCG	1 cut(s)	40
Bsu36I	CCTNAGG	1 cut(s)	93
BsuRI	GGCC	4 cut(s)	42, 104, 331, 345
BtgI	CCRYGG	1 cut(s)	43
BtrI	CACGTC	1 cut(s)	52
BtsCI	GGATG	2 cut(s)	60, 322
BveI	ACCTGC	1 cut(s)	367
Cac8I	GCNNGC	1 cut(s)	141
CfoI	GCGC	2 cut(s)	15, 233
Cfr13I	GGNCC	1 cut(s)	350
CseI	GACGC	1 cut(s)	318
Csp6I	GTAC	2 cut(s)	217, 384
CviJI	RGCY	8 cut(s)	42, 104, 143, 167, 289, 331, 340, 345
CviKI_1	RGCY	8 cut(s)	42, 104, 143, 167, 289, 331, 340, 345
CviQI	GTAC	2 cut(s)	217, 384
DdeI	CTNAG	1 cut(s)	93
DpnI	GATC	1 cut(s)	262
DpnII	GATC	1 cut(s)	260
DraIII	CACNNNGTG	1 cut(s)	250
EaeI	YGGCCR	2 cut(s)	40, 343
EagI	CGGCCG	1 cut(s)	40
EclXI	CGGCCG	1 cut(s)	40
Eco130I	CCWWGG	2 cut(s)	326, 346
Eco147I	AGGCCT	1 cut(s)	331
Eco47I	GGWCC	1 cut(s)	350
Eco52I	CGGCCG	1 cut(s)	40
Eco81I	CCTNAGG	1 cut(s)	93
EcoNI	CCTNNNNNAGG	1 cut(s)	345
EcoO109I	RGGNCCY	1 cut(s)	350
EcoRII	CCWGG	3 cut(s)	159, 331, 340
EcoT14I	CCWWGG	2 cut(s)	326, 346
ErhI	CCWWGG	2 cut(s)	326, 346
FaiI	YATR	2 cut(s)	177, 204
FalI	AAGNNNNNCTT	2 cut(s)	101, 133
Fnu4HI	GCNGC	4 cut(s)	67, 79, 88, 144
FokI	GGATG	2 cut(s)	47, 329
Fsp4HI	GCNGC	4 cut(s)	67, 79, 88, 144
FspI	TGCGCA	1 cut(s)	232
GlaI	GCGC	2 cut(s)	14, 232
GluI	GCNGC	4 cut(s)	67, 79, 88, 144
HaeII	RGCGCY	1 cut(s)	16
HaeIII	GGCC	4 cut(s)	42, 104, 331, 345
HapII	CCGG	1 cut(s)	16
HgaI	GACGC	1 cut(s)	318
HhaI	GCGC	2 cut(s)	15, 233
Hin6I	GCGC	2 cut(s)	13, 231
HinP1I	GCGC	2 cut(s)	13, 231
HindIII	AAGCTT	1 cut(s)	165
HinfI	GANTC	1 cut(s)	300
HpaII	CCGG	1 cut(s)	16
HphI	GGTGA	1 cut(s)	133
Hpy166II	GTNNAC	1 cut(s)	47
Hpy188I	TCNGA	1 cut(s)	308
Hpy188III	TCNNGA	1 cut(s)	109
Hpy8I	GTNNAC	1 cut(s)	47
HpyCH4III	ACNGT	1 cut(s)	284
HpyCH4IV	ACGT	2 cut(s)	51, 246
HpyCH4V	TGCA	1 cut(s)	214
HpyF10VI	GCNNNNNNNGC	6 cut(s)	75, 84, 87, 228, 295, 337
HpyF3I	CTNAG	1 cut(s)	93
HpySE526I	ACGT	2 cut(s)	51, 246
HspAI	GCGC	2 cut(s)	13, 231
Kzo9I	GATC	1 cut(s)	260
Lsp1109I	GCAGC	3 cut(s)	53, 74, 130
LweI	GCATC	2 cut(s)	201, 310
MaeII	ACGT	2 cut(s)	51, 246
MalI	GATC	1 cut(s)	262
MboI	GATC	1 cut(s)	260
MhlI	GDGCHC	1 cut(s)	370
MlsI	TGGCCA	1 cut(s)	345
MluCI	AATT	2 cut(s)	197, 234
MluNI	TGGCCA	1 cut(s)	345
MnlI	CCTC	5 cut(s)	105, 117, 246, 270, 363
Mox20I	TGGCCA	1 cut(s)	345
MscI	TGGCCA	1 cut(s)	345
MslI	CAYNNNNRTG	1 cut(s)	42
Msp20I	TGGCCA	1 cut(s)	345
MspA1I	CMGCKG	1 cut(s)	66
MspI	CCGG	1 cut(s)	16
MspR9I	CCNGG	3 cut(s)	161, 333, 342
MvaI	CCWGG	3 cut(s)	161, 333, 342
MwoI	GCNNNNNNNGC	6 cut(s)	75, 84, 87, 228, 295, 337
NdeII	GATC	1 cut(s)	260
NlaIV	GGNNCC	2 cut(s)	281, 367
NsbI	TGCGCA	1 cut(s)	232
OliI	CACNNNNGTG	1 cut(s)	42
PceI	AGGCCT	1 cut(s)	331
PfeI	GAWTC	1 cut(s)	300
PflMI	CCANNNNNTGG	1 cut(s)	332
PfoI	TCCNGGA	1 cut(s)	159
PkrI	GCNGC	4 cut(s)	68, 80, 89, 145
PpuMI	RGGWCCY	1 cut(s)	350
Psp5II	RGGWCCY	1 cut(s)	350
Psp6I	CCWGG	3 cut(s)	159, 331, 340
PspGI	CCWGG	3 cut(s)	159, 331, 340
PspN4I	GGNNCC	2 cut(s)	281, 367
PspPI	GGNCC	1 cut(s)	350
PspPPI	RGGWCCY	1 cut(s)	350
RsaI	GTAC	2 cut(s)	218, 385
RsaNI	GTAC	2 cut(s)	217, 384
RseI	CAYNNNNRTG	1 cut(s)	42
SatI	GCNGC	4 cut(s)	67, 79, 88, 144
Sau3AI	GATC	1 cut(s)	260
Sau96I	GGNCC	1 cut(s)	350
ScaI	AGTACT	1 cut(s)	218
ScrFI	CCNGG	3 cut(s)	161, 333, 342
SduI	GDGCHC	1 cut(s)	370
SetI	ASST	7 cut(s)	54, 116, 145, 169, 249, 352, 361
SfaNI	GCATC	2 cut(s)	201, 310
SinI	GGWCC	1 cut(s)	350
SmiMI	CAYNNNNRTG	1 cut(s)	42
Sse9I	AATT	2 cut(s)	197, 234
SseBI	AGGCCT	1 cut(s)	331
SsiI	CCGC	3 cut(s)	64, 78, 146
StuI	AGGCCT	1 cut(s)	331
StyD4I	CCNGG	3 cut(s)	159, 331, 340
StyI	CCWWGG	2 cut(s)	326, 346
TaaI	ACNGT	1 cut(s)	284
TaiI	ACGT	2 cut(s)	54, 249
TaqI	TCGA	1 cut(s)	355
TasI	AATT	2 cut(s)	197, 234
TatI	WGTACW	1 cut(s)	216
TauI	GCSGC	1 cut(s)	81
TfiI	GAWTC	1 cut(s)	300
TseI	GCWGC	3 cut(s)	66, 87, 143
TspDTI	ATGAA	2 cut(s)	49, 292
Van91I	CCANNNNNTGG	1 cut(s)	332
VpaK11BI	GGWCC	1 cut(s)	350
XagI	CCTNNNNNAGG	1 cut(s)	345
ZrmI	AGTACT	1 cut(s)	218

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.