Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0001923

Physical Location & Seq

Genomic Coordinates Reverse (-)

28910200 .. 28912631

Gene Structure 2432 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G300800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 933 bp

ATGGCGGCTGGGCACTTCGCCGCCACAACCCCCAACCCCATCCGCCTCATCCAATCCTCATACCTCCTCGCAAAACCCAACCCAACTATCTTCTTCCCACCTTCGAATCTTCGCCACCAAAAATCAGCACTTCATTATAGGGCTCGAAGGAAGCTCTGTTTCACTGTCTATGTCGTCATGGAGGACCAAAAGCAGAGTACCCATCTCGAGAATTGCACAGAAAAAGCCCAAGAGGCTGCTCAATCTCAGATCCCAATTGTAATTCCGTCCGTACGTGTGGCTGAGAAGTTGTCCAGAAAGAAATCGGAGAGGTTCACTTATCTTGTTGCTGCTGTGATGTCCAGCTTTGGTATTACTTCCATGGCTGTCATGGCTGTTTATTACAGATTTTACTGGCAAATGGAGGGTGGGAATGTGCCTTTGTCTGAAATGTTGGGTACATTTGCTCTATCTGTTGGTGCTGCTGTGGGAATGGAGTTTTGGGCAAGATGGGCTCATAAAGCTCTCTGGCACGCTTCTTTATGGCATATGCACGAGTCTCACCACCGACCCAGAGAAGGTCCATTCGAGCTTAACGATGTGTTTGCTGTAATTAACGCTGTTCCAGCTATAGCCCTCCTCAATTATGGTTTCTTCCACAAAGGCCTTGTTCCTGGCCTATGTTTTGGTGCTGGTCTTGGAATTACAGTGTTCGGCATGGCGTATATGTTTGTCCACGATGGTTTAGTTCATAAAAGATTCCCAGTGGGTCCCATAGCCAACGTGCCCTATTTGAGAAAGGTTGCTGCTGCTCATCAGCTCCACCACTCAGAGAAATTCGAGGGTGTGCCATATGGGCTGTTTCTGGGTCCCAAGGAACTTGAAGAAGTGGGAGGCCTCGAAGAGTTGGAAAAGGAGATCGAAAGGAGAATCAAAGCGTACAAGGGATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006629 GO:0006720 GO:0006721 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009987 GO:0016108 GO:0016109 GO:0016114 GO:0016116 GO:0016117 GO:0016122 GO:0016123 GO:0042440 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0046148 GO:0071704 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

FA_hydroxylase

Protein Analysis

311

Amino Acids

34.8

Weight (kDa)

9.31

Isoelectric Point (pI)

49.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25700 AT4G25700 AT4G25700 AT5G52570 AT5G52570
fragaria_vesca	FvH4_5g03020 FvH4_7g30220 FvH4_7g30220 FvH4_7g30220 FvH4_7g30220 FvH4_7g30220
malus_domestica	MD01G1208300.v1.1 MD06G1089200.v1.1 MD07G1278900.v1.1
prunus_persica	Prupe.1G173800_v2.0.a1 Prupe.2G300800_v2.0.a1 Prupe.5G105100_v2.0.a1 Prupe.5G133900_v2.0.a1 Prupe.5G201800_v2.0.a1 Prupe.6G049800_v2.0.a1 Prupe.7G160800_v2.0.a1 Prupe.7G160800_v2.0.a1
pyrus_communis	pycom01g21890 pycom06g08510 pycom07g25370
rosa_chinensis	RchiOBHm_Chr1g0378281 RchiOBHm_Chr7g0196841
rosa_laevigata	RLG00000003985 RLG00000026443
rosa_multiflora	Rmu_sc0001083.1_g000021 Rmu_sc0013545.1_g000006
rosa_roxburghii	Rroxscaffold_3G00258920 Rroxscaffold_4G00280530
rosa_rugosa	Rorug01G0407900 Rorug07G0036200 Rorug07G0036200
rosa_samantha	Rh1AG421600 Rh1BG387000 Rh1CG400500 Rh1DG418200 Rh7AG160500 Rh7BG162600 Rh7CG168900 Rh7DG162000
rosa_wichuraiana	Rw1G037580 Rw7G014030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	3 cut(s)	5, 21, 43
AclWI	GGATC	1 cut(s)	244
AcsI	RAATTY	1 cut(s)	815
AfaI	GTAC	4 cut(s)	199, 273, 439, 920
AfiI	CCNNNNNNNGG	1 cut(s)	557
AflIII	ACRYGT	1 cut(s)	274
AgsI	TTSAA	1 cut(s)	863
AjnI	CCWGG	1 cut(s)	652
AjuI	GAANNNNNNNTTGG	2 cut(s)	463, 495
AluBI	AGCT	6 cut(s)	154, 345, 503, 571, 608, 799
AluI	AGCT	6 cut(s)	154, 345, 503, 571, 608, 799
Alw26I	GTCTC	1 cut(s)	543
AlwI	GGATC	1 cut(s)	244
Ama87I	CYCGRG	1 cut(s)	206
AoxI	GGCC	3 cut(s)	643, 655, 874
ApeKI	GCWGC	5 cut(s)	236, 329, 461, 785, 788
ApoI	RAATTY	1 cut(s)	815
AspS9I	GGNCC	4 cut(s)	184, 560, 749, 848
AsuHPI	GGTGA	1 cut(s)	533
AsuII	TTCGAA	1 cut(s)	104
AvaI	CYCGRG	1 cut(s)	206
AvaII	GGWCC	4 cut(s)	184, 560, 749, 848
BaeGI	GKGCMC	2 cut(s)	15, 768
BanII	GRGCYC	2 cut(s)	145, 496
BauI	CACGAG	1 cut(s)	533
BbvI	GCAGC	5 cut(s)	223, 316, 448, 772, 775
BccI	CCATC	4 cut(s)	47, 210, 483, 713
BcgI	CGANNNNNNTGC	2 cut(s)	566, 600
BciT130I	CCWGG	1 cut(s)	654
BcoDI	GTCTC	1 cut(s)	543
BfmI	CTRYAG	1 cut(s)	609
BglI	GCCNNNNNGGC	2 cut(s)	233, 835
BisI	GCNGC	7 cut(s)	6, 21, 237, 330, 462, 786, 789
BlsI	GCNGC	7 cut(s)	7, 22, 238, 331, 463, 787, 790
Bme1390I	CCNGG	1 cut(s)	654
Bme18I	GGWCC	4 cut(s)	184, 560, 749, 848
BmeT110I	CYCGRG	1 cut(s)	206
BmgT120I	GGNCC	4 cut(s)	184, 560, 749, 848
BmiI	GGNNCC	4 cut(s)	750, 751, 849, 850
BmrFI	CCNGG	1 cut(s)	654
BmrI	ACTGGG	1 cut(s)	737
BmuI	ACTGGG	1 cut(s)	737
Bpu14I	TTCGAA	1 cut(s)	104
BsaAI	YACGTR	1 cut(s)	275
BsaJI	CCNNGG	2 cut(s)	360, 852
Bsc4I	CCNNNNNNNGG	1 cut(s)	557
Bse1I	ACTGG	2 cut(s)	398, 743
BseBI	CCWGG	1 cut(s)	654
BseDI	CCNNGG	2 cut(s)	360, 852
BseGI	GGATG	2 cut(s)	39, 48
BseLI	CCNNNNNNNGG	1 cut(s)	557
BseMII	CTCAG	3 cut(s)	260, 273, 822
BseNI	ACTGG	2 cut(s)	398, 743
BseRI	GAGGAG	2 cut(s)	56, 608
BseSI	GKGCMC	2 cut(s)	15, 768
BseXI	GCAGC	5 cut(s)	223, 316, 448, 772, 775
BseYI	CCCAGC	1 cut(s)	8
BshFI	GGCC	3 cut(s)	645, 657, 876
BsiHKCI	CYCGRG	1 cut(s)	206
BsiWI	CGTACG	1 cut(s)	271
BslFI	GGGAC	2 cut(s)	735, 834
BslI	CCNNNNNNNGG	1 cut(s)	557
BsmAI	GTCTC	1 cut(s)	543
BsmFI	GGGAC	2 cut(s)	735, 834
BsnI	GGCC	3 cut(s)	645, 657, 876
BsoBI	CYCGRG	1 cut(s)	206
Bsp119I	TTCGAA	1 cut(s)	104
Bsp1286I	GDGCHC	4 cut(s)	15, 145, 496, 768
Bsp143I	GATC	3 cut(s)	249, 897, 926
Bsp19I	CCATGG	1 cut(s)	360
BspACI	CCGC	3 cut(s)	5, 21, 43
BspANI	GGCC	3 cut(s)	645, 657, 876
BspCNI	CTCAG	3 cut(s)	259, 274, 821
BspHI	TCATGA	1 cut(s)	929
BspLI	GGNNCC	4 cut(s)	750, 751, 849, 850
BspPI	GGATC	1 cut(s)	244
BspT104I	TTCGAA	1 cut(s)	104
BsrI	ACTGG	2 cut(s)	398, 743
BssECI	CCNNGG	2 cut(s)	360, 852
BssMI	GATC	3 cut(s)	249, 897, 926
BssSI	CACGAG	1 cut(s)	533
BssT1I	CCWWGG	2 cut(s)	360, 852
Bst2BI	CACGAG	1 cut(s)	533
Bst2UI	CCWGG	1 cut(s)	654
Bst4CI	ACNGT	2 cut(s)	166, 688
Bst6I	CTCTTC	1 cut(s)	876
BstBAI	YACGTR	1 cut(s)	275
BstBI	TTCGAA	1 cut(s)	104
BstC8I	GCNNGC	1 cut(s)	513
BstDEI	CTNAG	3 cut(s)	246, 282, 808
BstDSI	CCRYGG	1 cut(s)	360
BstF5I	GGATG	2 cut(s)	39, 48
BstKTI	GATC	3 cut(s)	252, 900, 929
BstMAI	GTCTC	1 cut(s)	543
BstMBI	GATC	3 cut(s)	249, 897, 926
BstMWI	GCNNNNNNNGC	6 cut(s)	233, 371, 491, 500, 605, 835
BstNI	CCWGG	1 cut(s)	654
BstSCI	CCNGG	1 cut(s)	652
BstSFI	CTRYAG	1 cut(s)	609
BstSLI	GKGCMC	2 cut(s)	15, 768
BstV1I	GCAGC	5 cut(s)	223, 316, 448, 772, 775
BstX2I	RGATCY	1 cut(s)	249
BstYI	RGATCY	1 cut(s)	249
BsuRI	GGCC	3 cut(s)	645, 657, 876
BtgI	CCRYGG	1 cut(s)	360
BtsCI	GGATG	2 cut(s)	39, 48
BtsIMutI	CAGTG	3 cut(s)	162, 693, 750
Cac8I	GCNNGC	1 cut(s)	513
CciI	TCATGA	1 cut(s)	929
Cfr13I	GGNCC	4 cut(s)	184, 560, 749, 848
Csp6I	GTAC	4 cut(s)	198, 272, 438, 919
CviAII	CATG	5 cut(s)	178, 361, 370, 697, 930
CviQI	GTAC	4 cut(s)	198, 272, 438, 919
DdeI	CTNAG	3 cut(s)	246, 282, 808
DpnI	GATC	3 cut(s)	251, 899, 928
DpnII	GATC	3 cut(s)	249, 897, 926
Eam1104I	CTCTTC	1 cut(s)	876
EarI	CTCTTC	1 cut(s)	876
EciI	GGCGGA	1 cut(s)	32
Eco130I	CCWWGG	2 cut(s)	360, 852
Eco147I	AGGCCT	2 cut(s)	645, 876
Eco24I	GRGCYC	2 cut(s)	145, 496
Eco47I	GGWCC	4 cut(s)	184, 560, 749, 848
Eco88I	CYCGRG	1 cut(s)	206
EcoO109I	RGGNCCY	2 cut(s)	749, 848
EcoRII	CCWGG	1 cut(s)	652
EcoT14I	CCWWGG	2 cut(s)	360, 852
EcoT38I	GRGCYC	2 cut(s)	145, 496
ErhI	CCWWGG	2 cut(s)	360, 852
FaeI	CATG	5 cut(s)	181, 364, 373, 700, 933
FaqI	GGGAC	2 cut(s)	735, 834
FatI	CATG	5 cut(s)	177, 360, 369, 696, 929
FauNDI	CATATG	2 cut(s)	528, 832
Fnu4HI	GCNGC	7 cut(s)	6, 21, 237, 330, 462, 786, 789
FokI	GGATG	2 cut(s)	26, 35
FriOI	GRGCYC	2 cut(s)	145, 496
Fsp4HI	GCNGC	7 cut(s)	6, 21, 237, 330, 462, 786, 789
GluI	GCNGC	7 cut(s)	6, 21, 237, 330, 462, 786, 789
GsaI	CCCAGC	1 cut(s)	12
HaeIII	GGCC	3 cut(s)	645, 657, 876
Hin1II	CATG	5 cut(s)	181, 364, 373, 700, 933
HinfI	GANTC	4 cut(s)	106, 536, 738, 909
HphI	GGTGA	1 cut(s)	533
Hpy166II	GTNNAC	2 cut(s)	315, 715
Hpy188I	TCNGA	4 cut(s)	249, 307, 427, 811
Hpy188III	TCNNGA	4 cut(s)	206, 208, 294, 930
Hpy8I	GTNNAC	2 cut(s)	315, 715
HpyAV	CCTTC	3 cut(s)	111, 141, 551
HpyCH4III	ACNGT	2 cut(s)	166, 688
HpyCH4IV	ACGT	2 cut(s)	274, 762
HpyCH4V	TGCA	2 cut(s)	216, 532
HpyF10VI	GCNNNNNNNGC	6 cut(s)	233, 371, 491, 500, 605, 835
HpyF3I	CTNAG	3 cut(s)	246, 282, 808
HpySE526I	ACGT	2 cut(s)	274, 762
Hsp92II	CATG	5 cut(s)	181, 364, 373, 700, 933
KflI	GGGWCCC	2 cut(s)	749, 848
Kzo9I	GATC	3 cut(s)	249, 897, 926
LmnI	GCTCC	1 cut(s)	804
Lsp1109I	GCAGC	5 cut(s)	223, 316, 448, 772, 775
MaeII	ACGT	2 cut(s)	274, 762
MalI	GATC	3 cut(s)	251, 899, 928
MboI	GATC	3 cut(s)	249, 897, 926
MboII	GAAGA	6 cut(s)	82, 85, 101, 625, 875, 893
MfeI	CAATTG	1 cut(s)	255
MflI	RGATCY	1 cut(s)	249
MhlI	GDGCHC	4 cut(s)	15, 145, 496, 768
MluCI	AATT	7 cut(s)	211, 255, 261, 591, 622, 681, 815
MlyI	GAGTC	1 cut(s)	545
MmeI	TCCRAC	1 cut(s)	867
MseI	TTAA	2 cut(s)	573, 594
MspR9I	CCNGG	1 cut(s)	654
MunI	CAATTG	1 cut(s)	255
MvaI	CCWGG	1 cut(s)	654
MwoI	GCNNNNNNNGC	6 cut(s)	233, 371, 491, 500, 605, 835
NcoI	CCATGG	1 cut(s)	360
NdeI	CATATG	2 cut(s)	528, 832
NdeII	GATC	3 cut(s)	249, 897, 926
NlaIII	CATG	5 cut(s)	181, 364, 373, 700, 933
NlaIV	GGNNCC	4 cut(s)	750, 751, 849, 850
NspV	TTCGAA	1 cut(s)	104
PaeR7I	CTCGAG	1 cut(s)	206
PagI	TCATGA	1 cut(s)	929
PceI	AGGCCT	2 cut(s)	645, 876
PcsI	WCGNNNNNNNCGW	1 cut(s)	573
PfeI	GAWTC	3 cut(s)	106, 738, 909
Pfl23II	CGTACG	1 cut(s)	271
PkrI	GCNGC	7 cut(s)	7, 22, 238, 331, 463, 787, 790
PleI	GAGTC	1 cut(s)	544
PpsI	GAGTC	1 cut(s)	544
Ppu21I	YACGTR	1 cut(s)	275
PpuMI	RGGWCCY	2 cut(s)	749, 848
Psp5II	RGGWCCY	2 cut(s)	749, 848
Psp6I	CCWGG	1 cut(s)	652
PspFI	CCCAGC	1 cut(s)	8
PspGI	CCWGG	1 cut(s)	652
PspLI	CGTACG	1 cut(s)	271
PspN4I	GGNNCC	4 cut(s)	750, 751, 849, 850
PspPI	GGNCC	4 cut(s)	184, 560, 749, 848
PspPPI	RGGWCCY	2 cut(s)	749, 848
PsuI	RGATCY	1 cut(s)	249
RsaI	GTAC	4 cut(s)	199, 273, 439, 920
RsaNI	GTAC	4 cut(s)	198, 272, 438, 919
SaqAI	TTAA	2 cut(s)	573, 594
SatI	GCNGC	7 cut(s)	6, 21, 237, 330, 462, 786, 789
Sau3AI	GATC	3 cut(s)	249, 897, 926
Sau96I	GGNCC	4 cut(s)	184, 560, 749, 848
SchI	GAGTC	1 cut(s)	545
ScrFI	CCNGG	1 cut(s)	654
SduI	GDGCHC	4 cut(s)	15, 145, 496, 768
SfcI	CTRYAG	1 cut(s)	609
Sfr274I	CTCGAG	1 cut(s)	206
SfuI	TTCGAA	1 cut(s)	104
SinI	GGWCC	4 cut(s)	184, 560, 749, 848
SlaI	CTCGAG	1 cut(s)	206
SmlI	CTYRAG	1 cut(s)	206
SmoI	CTYRAG	1 cut(s)	206
Sse9I	AATT	7 cut(s)	211, 255, 261, 591, 622, 681, 815
SseBI	AGGCCT	2 cut(s)	645, 876
SsiI	CCGC	3 cut(s)	5, 21, 43
StuI	AGGCCT	2 cut(s)	645, 876
StyD4I	CCNGG	1 cut(s)	652
StyI	CCWWGG	2 cut(s)	360, 852
TaaI	ACNGT	2 cut(s)	166, 688
TaiI	ACGT	2 cut(s)	277, 765
TaqI	TCGA	7 cut(s)	104, 145, 207, 567, 819, 879, 900
TasI	AATT	7 cut(s)	211, 255, 261, 591, 622, 681, 815
TauI	GCSGC	2 cut(s)	8, 23
TfiI	GAWTC	3 cut(s)	106, 738, 909
Tru1I	TTAA	2 cut(s)	573, 594
Tru9I	TTAA	2 cut(s)	573, 594
TscAI	CASTG	3 cut(s)	169, 693, 750
TseI	GCWGC	5 cut(s)	236, 329, 461, 785, 788
TspDTI	ATGAA	2 cut(s)	122, 719
TspGWI	ACGGA	2 cut(s)	255, 259
TspRI	CASTG	3 cut(s)	169, 693, 750
VpaK11BI	GGWCC	4 cut(s)	184, 560, 749, 848
XapI	RAATTY	1 cut(s)	815
XcmI	CCANNNNNNNNNTGG	1 cut(s)	367
XhoI	CTCGAG	1 cut(s)	206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.