Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0001923

Physical Location & Seq

Genomic Coordinates Reverse (-)

11159013 .. 11161115

Gene Structure 2103 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G105100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 885 bp

ATGGCTGCTTCCTCAGTCACTGTAACATACAATTTCGGCCAAAAAACTCTCCTTGCTCGAAAACCCATCTCCAAAACAATCCCCTCTTCTGTTTTAACTTCCTCAACAGCAACATACCTGAAGAAGAAGAGATGGAACGTTCTGCGCTTGGTTATGGTAAAGAAAACAGAGAAGGATCATAAACTACAAGAAGAGACGAACACAGAGAGGTGGACTGTGATAACACCACGTGTGTTACAGAGATTGGAGAGAAAGAGATCAGAGAGAAACACCTACCTTGTTGCTGCAGTCATGTCCAGCCTTGGAGTCACTTCAGCTGCCGCCATGGCTGTATATTACAGATTCTCTTGGCAAACAGAATTTGGAGAATATATCCTTCCTGAAATGCTGGGTACGTTTGCTCTCTCTGTTGGCTCTGCTGTGGGAATGGAGTTTTGGGCAAGGTGGGCTCATAGAGCTCTGTGGCATGCTTCACTGTGGGATATGCATGAGTCTCATCACCAACCTAGGGATGGCCCTTTCGAGCTCAACGATATCTTTGCCATAATCAATGTTGTTCCTGCAATTGCTCTTCTCTCTTATGGTTTCCTCAACACGGGTTTGTTTCCAGGACTCTGTTTTGGTGCTGGATTAGGAATAACAACTTTTGGGATGGCTTACATGTTTGTGCATGATGGTCTTGTGCACCGTAGATTTCCAGTTGGGCCAATCGCAGACGTCCCTTATTTACAAAAAGTTGCTGCAGCCCATTATCTTCATCACTCTTGCATATTGAATGGAGTGCCATATGGGTTGTTCTTGGGACCTAAGGAAATAGAGGAGGTTGGGGGCATGGAAGAATTGGAAAAGGAAGTCCAGCGCAGAACTAAGAAATCCAAAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00906 ko01100 ko01110 map00906 map01100 map01110

Pfam Domains

Protein Families

FA_hydroxylase

Protein Analysis

295

Amino Acids

33.12

Weight (kDa)

9.48

Isoelectric Point (pI)

51.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25700 AT4G25700 AT4G25700 AT5G52570 AT5G52570
fragaria_vesca	FvH4_5g03020 FvH4_7g30220 FvH4_7g30220 FvH4_7g30220 FvH4_7g30220 FvH4_7g30220
malus_domestica	MD01G1208300.v1.1 MD06G1089200.v1.1 MD07G1278900.v1.1
prunus_persica	Prupe.1G173800_v2.0.a1 Prupe.2G300800_v2.0.a1 Prupe.5G105100_v2.0.a1 Prupe.5G133900_v2.0.a1 Prupe.5G201800_v2.0.a1 Prupe.6G049800_v2.0.a1 Prupe.7G160800_v2.0.a1 Prupe.7G160800_v2.0.a1
pyrus_communis	pycom01g21890 pycom06g08510 pycom07g25370
rosa_chinensis	RchiOBHm_Chr1g0378281 RchiOBHm_Chr7g0196841
rosa_laevigata	RLG00000003985 RLG00000026443
rosa_multiflora	Rmu_sc0001083.1_g000021 Rmu_sc0013545.1_g000006
rosa_roxburghii	Rroxscaffold_3G00258920 Rroxscaffold_4G00280530
rosa_rugosa	Rorug01G0407900 Rorug07G0036200 Rorug07G0036200
rosa_samantha	Rh1AG421600 Rh1BG387000 Rh1CG400500 Rh1DG418200 Rh7AG160500 Rh7BG162600 Rh7CG168900 Rh7DG162000
rosa_wichuraiana	Rw1G037580 Rw7G014030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	720
AciI	CCGC	1 cut(s)	321
AclI	AACGTT	1 cut(s)	138
AclWI	GGATC	1 cut(s)	183
AcoI	YGGCCR	1 cut(s)	37
AcsI	RAATTY	1 cut(s)	359
AcuI	CTGAAG	2 cut(s)	140, 297
AcvI	CACGTG	1 cut(s)	230
AcyI	GRCGYC	1 cut(s)	717
AdeI	CACNNNGTG	1 cut(s)	230
AfaI	GTAC	1 cut(s)	394
AfiI	CCNNNNNNNGG	3 cut(s)	508, 512, 595
AflIII	ACRYGT	2 cut(s)	229, 660
AgsI	TTSAA	1 cut(s)	775
AjnI	CCWGG	1 cut(s)	607
AjuI	GAANNNNNNNTTGG	2 cut(s)	418, 450
AluBI	AGCT	3 cut(s)	317, 458, 526
AluI	AGCT	3 cut(s)	317, 458, 526
Alw21I	GWGCWC	3 cut(s)	460, 528, 687
Alw26I	GTCTC	2 cut(s)	188, 498
Alw44I	GTGCAC	1 cut(s)	683
AlwI	GGATC	1 cut(s)	183
AlwNI	CAGNNNCTG	1 cut(s)	20
AoxI	GGCC	3 cut(s)	37, 514, 704
ApaLI	GTGCAC	1 cut(s)	683
ApeKI	GCWGC	5 cut(s)	5, 284, 317, 740, 743
ApoI	RAATTY	1 cut(s)	359
AspA2I	CCTAGG	1 cut(s)	506
AspLEI	GCGC	2 cut(s)	147, 861
AspS9I	GGNCC	3 cut(s)	515, 704, 803
AsuHPI	GGTGA	1 cut(s)	491
AvaII	GGWCC	1 cut(s)	803
AvrII	CCTAGG	1 cut(s)	506
AxyI	CCTNAGG	1 cut(s)	807
BaeGI	GKGCMC	1 cut(s)	687
BanII	GRGCYC	3 cut(s)	451, 460, 528
BbrPI	CACGTG	1 cut(s)	230
Bbv12I	GWGCWC	3 cut(s)	460, 528, 687
BbvI	GCAGC	4 cut(s)	271, 304, 727, 755
BccI	CCATC	5 cut(s)	74, 126, 506, 646, 668
BcgI	CGANNNNNNTGC	2 cut(s)	521, 555
BciT130I	CCWGG	1 cut(s)	609
BcoDI	GTCTC	2 cut(s)	188, 498
BfaI	CTAG	1 cut(s)	507
BfmI	CTRYAG	2 cut(s)	285, 741
BglI	GCCNNNNNGGC	1 cut(s)	326
BisI	GCNGC	6 cut(s)	6, 285, 318, 321, 741, 744
BlnI	CCTAGG	1 cut(s)	506
BlsI	GCNGC	6 cut(s)	7, 286, 319, 322, 742, 745
Bme1390I	CCNGG	1 cut(s)	609
Bme18I	GGWCC	1 cut(s)	803
BmgT120I	GGNCC	3 cut(s)	515, 704, 803
BmiI	GGNNCC	1 cut(s)	804
BmrFI	CCNGG	1 cut(s)	609
BsaAI	YACGTR	1 cut(s)	230
BsaHI	GRCGYC	1 cut(s)	717
BsaJI	CCNNGG	3 cut(s)	301, 324, 506
Bsc4I	CCNNNNNNNGG	3 cut(s)	508, 512, 595
Bse1I	ACTGG	1 cut(s)	698
Bse21I	CCTNAGG	1 cut(s)	807
BseBI	CCWGG	1 cut(s)	609
BseDI	CCNNGG	3 cut(s)	301, 324, 506
BseGI	GGATG	2 cut(s)	517, 657
BseLI	CCNNNNNNNGG	3 cut(s)	508, 512, 595
BseMII	CTCAG	1 cut(s)	27
BseNI	ACTGG	1 cut(s)	698
BseRI	GAGGAG	1 cut(s)	833
BseSI	GKGCMC	1 cut(s)	687
BseXI	GCAGC	4 cut(s)	271, 304, 727, 755
BseYI	CCCAGC	1 cut(s)	388
BshFI	GGCC	3 cut(s)	39, 516, 706
BsiHKAI	GWGCWC	3 cut(s)	460, 528, 687
BslFI	GGGAC	2 cut(s)	704, 816
BslI	CCNNNNNNNGG	3 cut(s)	508, 512, 595
BsmAI	GTCTC	2 cut(s)	188, 498
BsmBI	CGTCTC	1 cut(s)	188
BsmFI	GGGAC	2 cut(s)	704, 816
BsnI	GGCC	3 cut(s)	39, 516, 706
Bsp1286I	GDGCHC	4 cut(s)	451, 460, 528, 687
Bsp143I	GATC	2 cut(s)	175, 257
Bsp19I	CCATGG	1 cut(s)	324
BspACI	CCGC	1 cut(s)	321
BspANI	GGCC	3 cut(s)	39, 516, 706
BspCNI	CTCAG	1 cut(s)	26
BspLI	GGNNCC	1 cut(s)	804
BspMAI	CTGCAG	2 cut(s)	289, 745
BspPI	GGATC	1 cut(s)	183
BspQI	GCTCTTC	1 cut(s)	576
BsrI	ACTGG	1 cut(s)	698
BssECI	CCNNGG	3 cut(s)	301, 324, 506
BssMI	GATC	2 cut(s)	175, 257
BssNI	GRCGYC	1 cut(s)	717
BssT1I	CCWWGG	3 cut(s)	301, 324, 506
Bst2UI	CCWGG	1 cut(s)	609
Bst4CI	ACNGT	4 cut(s)	22, 217, 477, 689
Bst6I	CTCTTC	4 cut(s)	91, 122, 186, 576
BstACI	GRCGYC	1 cut(s)	717
BstBAI	YACGTR	1 cut(s)	230
BstC8I	GCNNGC	1 cut(s)	468
BstDEI	CTNAG	3 cut(s)	13, 807, 867
BstDSI	CCRYGG	1 cut(s)	324
BstF5I	GGATG	2 cut(s)	517, 657
BstHHI	GCGC	2 cut(s)	147, 861
BstKTI	GATC	2 cut(s)	178, 260
BstMAI	GTCTC	2 cut(s)	188, 498
BstMBI	GATC	2 cut(s)	175, 257
BstMWI	GCNNNNNNNGC	3 cut(s)	326, 446, 455
BstNI	CCWGG	1 cut(s)	609
BstNSI	RCATGY	2 cut(s)	470, 664
BstSCI	CCNGG	1 cut(s)	607
BstSFI	CTRYAG	2 cut(s)	285, 741
BstSLI	GKGCMC	1 cut(s)	687
BstV1I	GCAGC	4 cut(s)	271, 304, 727, 755
Bsu36I	CCTNAGG	1 cut(s)	807
BsuRI	GGCC	3 cut(s)	39, 516, 706
BtgI	CCRYGG	1 cut(s)	324
BtsCI	GGATG	2 cut(s)	517, 657
BtsIMutI	CAGTG	2 cut(s)	18, 473
Cac8I	GCNNGC	1 cut(s)	468
CaiI	CAGNNNCTG	1 cut(s)	20
CfoI	GCGC	2 cut(s)	147, 861
Cfr13I	GGNCC	3 cut(s)	515, 704, 803
Csp6I	GTAC	1 cut(s)	393
CviAII	CATG	7 cut(s)	292, 325, 467, 488, 661, 671, 832
CviQI	GTAC	1 cut(s)	393
DdeI	CTNAG	3 cut(s)	13, 807, 867
DpnI	GATC	2 cut(s)	177, 259
DpnII	GATC	2 cut(s)	175, 257
DraIII	CACNNNGTG	1 cut(s)	230
EaeI	YGGCCR	1 cut(s)	37
Eam1104I	CTCTTC	4 cut(s)	91, 122, 186, 576
EarI	CTCTTC	4 cut(s)	91, 122, 186, 576
Ecl136II	GAGCTC	2 cut(s)	458, 526
Eco130I	CCWWGG	3 cut(s)	301, 324, 506
Eco24I	GRGCYC	3 cut(s)	451, 460, 528
Eco32I	GATATC	1 cut(s)	535
Eco47I	GGWCC	1 cut(s)	803
Eco53kI	GAGCTC	2 cut(s)	458, 526
Eco57I	CTGAAG	2 cut(s)	140, 297
Eco72I	CACGTG	1 cut(s)	230
Eco81I	CCTNAGG	1 cut(s)	807
EcoICRI	GAGCTC	2 cut(s)	458, 526
EcoO109I	RGGNCCY	1 cut(s)	803
EcoRII	CCWGG	1 cut(s)	607
EcoRV	GATATC	1 cut(s)	535
EcoT14I	CCWWGG	3 cut(s)	301, 324, 506
EcoT22I	ATGCAT	1 cut(s)	489
EcoT38I	GRGCYC	3 cut(s)	451, 460, 528
ErhI	CCWWGG	3 cut(s)	301, 324, 506
Esp3I	CGTCTC	1 cut(s)	188
FaeI	CATG	7 cut(s)	295, 328, 470, 491, 664, 674, 835
FaqI	GGGAC	2 cut(s)	704, 816
FatI	CATG	7 cut(s)	291, 324, 466, 487, 660, 670, 831
FauNDI	CATATG	1 cut(s)	787
Fnu4HI	GCNGC	6 cut(s)	6, 285, 318, 321, 741, 744
FokI	GGATG	2 cut(s)	524, 664
FriOI	GRGCYC	3 cut(s)	451, 460, 528
Fsp4HI	GCNGC	6 cut(s)	6, 285, 318, 321, 741, 744
FspBI	CTAG	1 cut(s)	507
GlaI	GCGC	2 cut(s)	146, 860
GluI	GCNGC	6 cut(s)	6, 285, 318, 321, 741, 744
GsaI	CCCAGC	1 cut(s)	392
HaeIII	GGCC	3 cut(s)	39, 516, 706
HhaI	GCGC	2 cut(s)	147, 861
Hin1I	GRCGYC	1 cut(s)	717
Hin1II	CATG	7 cut(s)	295, 328, 470, 491, 664, 674, 835
Hin6I	GCGC	2 cut(s)	145, 859
HinP1I	GCGC	2 cut(s)	145, 859
HinfI	GANTC	4 cut(s)	306, 342, 491, 612
HphI	GGTGA	1 cut(s)	491
Hpy166II	GTNNAC	2 cut(s)	213, 685
Hpy188I	TCNGA	1 cut(s)	262
Hpy188III	TCNNGA	1 cut(s)	380
Hpy8I	GTNNAC	2 cut(s)	213, 685
HpyAV	CCTTC	2 cut(s)	166, 386
HpyCH4III	ACNGT	4 cut(s)	22, 217, 477, 689
HpyCH4IV	ACGT	4 cut(s)	138, 229, 395, 717
HpyCH4V	TGCA	7 cut(s)	287, 487, 563, 670, 685, 743, 768
HpyF10VI	GCNNNNNNNGC	3 cut(s)	326, 446, 455
HpyF3I	CTNAG	3 cut(s)	13, 807, 867
HpySE526I	ACGT	4 cut(s)	138, 229, 395, 717
Hsp92I	GRCGYC	1 cut(s)	717
Hsp92II	CATG	7 cut(s)	295, 328, 470, 491, 664, 674, 835
HspAI	GCGC	2 cut(s)	145, 859
Kzo9I	GATC	2 cut(s)	175, 257
LguI	GCTCTTC	1 cut(s)	576
Lsp1109I	GCAGC	4 cut(s)	271, 304, 727, 755
MaeI	CTAG	1 cut(s)	507
MaeII	ACGT	4 cut(s)	138, 229, 395, 717
MaeIII	GTNAC	4 cut(s)	16, 22, 234, 307
MalI	GATC	2 cut(s)	177, 259
MboI	GATC	2 cut(s)	175, 257
MboII	GAAGA	8 cut(s)	78, 133, 136, 139, 203, 563, 746, 848
MfeI	CAATTG	1 cut(s)	564
MhlI	GDGCHC	4 cut(s)	451, 460, 528, 687
MluCI	AATT	4 cut(s)	31, 359, 564, 839
MlyI	GAGTC	3 cut(s)	315, 500, 606
MnlI	CCTC	7 cut(s)	22, 94, 112, 201, 599, 811, 814
Mph1103I	ATGCAT	1 cut(s)	489
MseI	TTAA	1 cut(s)	95
MslI	CAYNNNNRTG	1 cut(s)	665
MspA1I	CMGCKG	1 cut(s)	317
MspR9I	CCNGG	1 cut(s)	609
MunI	CAATTG	1 cut(s)	564
MvaI	CCWGG	1 cut(s)	609
MwoI	GCNNNNNNNGC	3 cut(s)	326, 446, 455
NcoI	CCATGG	1 cut(s)	324
NdeI	CATATG	1 cut(s)	787
NdeII	GATC	2 cut(s)	175, 257
NlaIII	CATG	7 cut(s)	295, 328, 470, 491, 664, 674, 835
NlaIV	GGNNCC	1 cut(s)	804
NmuCI	GTSAC	2 cut(s)	16, 307
NsiI	ATGCAT	1 cut(s)	489
NspI	RCATGY	2 cut(s)	470, 664
PaeI	GCATGC	1 cut(s)	470
PciI	ACATGT	1 cut(s)	660
PciSI	GCTCTTC	1 cut(s)	576
PcsI	WCGNNNNNNNCGW	1 cut(s)	528
PfeI	GAWTC	1 cut(s)	342
PfoI	TCCNGGA	1 cut(s)	607
PkrI	GCNGC	6 cut(s)	7, 286, 319, 322, 742, 745
PleI	GAGTC	3 cut(s)	314, 499, 606
PmaCI	CACGTG	1 cut(s)	230
PmlI	CACGTG	1 cut(s)	230
PpsI	GAGTC	3 cut(s)	314, 499, 606
Ppu21I	YACGTR	1 cut(s)	230
PpuMI	RGGWCCY	1 cut(s)	803
PscI	ACATGT	1 cut(s)	660
Psp124BI	GAGCTC	2 cut(s)	460, 528
Psp1406I	AACGTT	1 cut(s)	138
Psp5II	RGGWCCY	1 cut(s)	803
Psp6I	CCWGG	1 cut(s)	607
PspCI	CACGTG	1 cut(s)	230
PspFI	CCCAGC	1 cut(s)	388
PspGI	CCWGG	1 cut(s)	607
PspN4I	GGNNCC	1 cut(s)	804
PspPI	GGNCC	3 cut(s)	515, 704, 803
PspPPI	RGGWCCY	1 cut(s)	803
PstI	CTGCAG	2 cut(s)	289, 745
PstNI	CAGNNNCTG	1 cut(s)	20
PvuII	CAGCTG	1 cut(s)	317
RsaI	GTAC	1 cut(s)	394
RsaNI	GTAC	1 cut(s)	393
RseI	CAYNNNNRTG	1 cut(s)	665
SacI	GAGCTC	2 cut(s)	460, 528
SapI	GCTCTTC	1 cut(s)	576
SaqAI	TTAA	1 cut(s)	95
SatI	GCNGC	6 cut(s)	6, 285, 318, 321, 741, 744
Sau3AI	GATC	2 cut(s)	175, 257
Sau96I	GGNCC	3 cut(s)	515, 704, 803
SchI	GAGTC	3 cut(s)	315, 500, 606
ScrFI	CCNGG	1 cut(s)	609
SduI	GDGCHC	4 cut(s)	451, 460, 528, 687
SfcI	CTRYAG	2 cut(s)	285, 741
SinI	GGWCC	1 cut(s)	803
SmiMI	CAYNNNNRTG	1 cut(s)	665
SphI	GCATGC	1 cut(s)	470
Sse9I	AATT	4 cut(s)	31, 359, 564, 839
SsiI	CCGC	1 cut(s)	321
SspMI	CTAG	1 cut(s)	507
SstI	GAGCTC	2 cut(s)	460, 528
StyD4I	CCNGG	1 cut(s)	607
StyI	CCWWGG	3 cut(s)	301, 324, 506
TaaI	ACNGT	4 cut(s)	22, 217, 477, 689
TaiI	ACGT	4 cut(s)	141, 232, 398, 720
TaqI	TCGA	2 cut(s)	58, 522
TasI	AATT	4 cut(s)	31, 359, 564, 839
TauI	GCSGC	1 cut(s)	323
TfiI	GAWTC	1 cut(s)	342
Tru1I	TTAA	1 cut(s)	95
Tru9I	TTAA	1 cut(s)	95
TscAI	CASTG	2 cut(s)	25, 480
TseFI	GTSAC	2 cut(s)	16, 307
TseI	GCWGC	5 cut(s)	5, 284, 317, 740, 743
Tsp45I	GTSAC	2 cut(s)	16, 307
TspDTI	ATGAA	1 cut(s)	746
TspRI	CASTG	2 cut(s)	25, 480
VneI	GTGCAC	1 cut(s)	683
VpaK11BI	GGWCC	1 cut(s)	803
XapI	RAATTY	1 cut(s)	359
XceI	RCATGY	2 cut(s)	470, 664
XcmI	CCANNNNNNNNNTGG	1 cut(s)	509
XmaJI	CCTAGG	1 cut(s)	506
XspI	CTAG	1 cut(s)	507
ZraI	GACGTC	1 cut(s)	718
Zsp2I	ATGCAT	1 cut(s)	489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.