Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0003170

Physical Location & Seq

Genomic Coordinates Forward (+)

30327190 .. 30339027

Gene Structure 11838 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G330300.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1308 bp

ATGGCGGAGGTAAATTTGAATAAAAACGTCCCTTTCGAAGAAAATGAGACTTTAGAGCCCATAAATGGCAATGGCAATAGGGAGGCCGCCGAACAATCTAAAATTTTGCAAAACGATGAAGATGACGACAAAGACATTGCAAAGAAAAAAAAGAAGAAAAGTAAAAGCAAGAAAAAGAAAGCACCGCAGGAGCAGACTAATCCACAATCTATGCAAGCGCAGACTGATCCACCATCTATTCCTGTTGTTGACCTGTTCCCATCTGGGGAGTTTCTTGAGGGTGAAATTCAACAGTACAAAGACGATAACCTGTGGAGGTCTACCTCTGAAGAGAAGAGGGAGTTGGAACGTGTTGAAAAACCAATGTATAATTCGGTTCGTCGAGCAGCTGAAGTTCATCGCCAGGTTCGGAAATACATCAAGGGAATTTTAAGGCCTGGAATGTTGATGACTGATTTGTGTGAGACTTTGGAAAACACAGTACGGAAGTTAATATCCGAGAATGGTCTGGAAGCAGGCATTGCTTTCCCCACGGGATGCTCTTTGAATTGGGTTGCTGCTCATTGGACCCCAAATACAGGCGACAAGACGGTGCTTCAGTATGATGATGTAATGAAATTGGATTTTGGAACTCATGTTGACGGATGTATAGTTGACTGTGCATTTACAGTAGCGTTCAATCCTATGTTTGATCCACTGCTTGAAGCCTCACGTGAAGCAACAAATATGGGTATCAAGGAGTCTGGAATTGATGTGCGTCTTTGTGATGTTGGTGCTGCAATCCAAGAAGTCATGGAATCGTATGAGGTTGAAATCAATGGAAAGGTGTATCAAGTTAAAAGTATCCGAAACTTGAATGGACATAGCATTGGACGTTATCAAATTCATGCTGGAAAATCTGTTCCTATTGTGAAAGGAGGGGAGCAGACGAAAATGGAAGAGGGTGAATTTTTTGCAATTGAAACTTTTGCATCAACTGGGAAAGGTTATGTCAGAGAAGATCTAGAGTGCAGCCATTACATGAAAAATTTTGAAGTTGGCCACATCCCATTGAGGATGCCCAGGGCAAAGCAATTGCTAGCAACAATTAACAAGAACTTCTCCACTTTGGCCTTTTGCAGGCGGTATTTAGACCGCCTGGGAGAGACGAAATATCTTATGGCGCTAAAGAATTTGTGTGATGCTGGCATTGTCCAGCCCTATCCTCCTCTCTGTGATGTTAAAGGCAGTTATGTATCTCAGTTTGAGCATACCATTTTGCTTCGGCCAACCTGCAAAGAGGTCATATCCAGAGGTGATGACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0019538 GO:0031365 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M24

Protein Analysis

436

Amino Acids

49.13

Weight (kDa)

5.79

Isoelectric Point (pI)

35.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003170)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44180 AT2G44180 AT3G59990 AT3G59990 AT3G59990 AT3G59990
fragaria_vesca	FvH4_5g31110 FvH4_5g31110 FvH4_5g31120
malus_domestica	MD17G1285400.v1.1
prunus_persica	Prupe.2G330300_v2.0.a1 Prupe.2G330300_v2.0.a1 Prupe.2G330300_v2.0.a1 Prupe.2G330300_v2.0.a1
pyrus_communis	pycom17g28120
rosa_chinensis	RchiOBHm_Chr1g0328111 RchiOBHm_Chr1g0328121 RchiOBHm_Chr1g0328131
rosa_laevigata	RLG00000029939
rosa_multiflora	Rmu_sc0000408.1_g000001 Rmu_sc0002809.1_g000034 Rmu_sc0004646.1_g000013 Rmu_sc0009961.1_g000001
rosa_roxburghii	Rroxscaffold_1G00060180 Rroxscaffold_4G00321810
rosa_rugosa	Rorug01G0073700 Rorug01G0073800.1 Rorug01G0073900
rosa_samantha	Rh1AG090800 Rh1BG072600 Rh1BG073300 Rh1BG073500 Rh1CG087200 Rh1DG094100 Rh1DG094600
rosa_wichuraiana	Rw1G007030 Rw1G007040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1280
AccI	GTMKAC	1 cut(s)	320
AciI	CCGC	5 cut(s)	5, 87, 185, 1123, 1135
AclWI	GGATC	2 cut(s)	221, 686
AcoI	YGGCCR	2 cut(s)	1039, 1265
AcsI	RAATTY	8 cut(s)	13, 102, 285, 426, 882, 947, 1027, 1171
AcuI	CTGAAG	3 cut(s)	348, 411, 581
AcvI	CACGTG	1 cut(s)	713
AfaI	GTAC	2 cut(s)	296, 483
AfiI	CCNNNNNNNGG	4 cut(s)	65, 265, 578, 1119
AflIII	ACRYGT	1 cut(s)	349
AjnI	CCWGG	4 cut(s)	402, 436, 1061, 1137
AjuI	GAANNNNNNNTTGG	4 cut(s)	326, 355, 358, 387
AloI	GAACNNNNNNTCC	2 cut(s)	885, 917
AluBI	AGCT	1 cut(s)	389
AluI	AGCT	1 cut(s)	389
Alw26I	GTCTC	3 cut(s)	41, 458, 1139
AlwI	GGATC	2 cut(s)	221, 686
AoxI	GGCC	5 cut(s)	84, 434, 1039, 1110, 1265
ApeKI	GCWGC	4 cut(s)	386, 557, 776, 1011
ApoI	RAATTY	8 cut(s)	13, 102, 285, 426, 882, 947, 1027, 1171
AspLEI	GCGC	2 cut(s)	220, 1165
AspS9I	GGNCC	1 cut(s)	567
AsuHPI	GGTGA	3 cut(s)	293, 956, 1307
AsuII	TTCGAA	1 cut(s)	36
AsuNHI	GCTAGC	1 cut(s)	1078
AvaII	GGWCC	1 cut(s)	567
BalI	TGGCCA	1 cut(s)	1041
BanII	GRGCYC	1 cut(s)	60
BbrPI	CACGTG	1 cut(s)	713
BbvI	GCAGC	4 cut(s)	398, 544, 763, 1023
BccI	CCATC	2 cut(s)	241, 268
BciT130I	CCWGG	4 cut(s)	404, 438, 1063, 1139
BciVI	GTATCC	1 cut(s)	854
BcoDI	GTCTC	3 cut(s)	41, 458, 1139
BfaI	CTAG	2 cut(s)	1004, 1079
BfoI	RGCGCY	1 cut(s)	1166
BfuAI	ACCTGC	1 cut(s)	1280
BfuI	GTATCC	1 cut(s)	854
BglII	AGATCT	1 cut(s)	1000
BisI	GCNGC	5 cut(s)	87, 387, 558, 777, 1012
BlsI	GCNGC	5 cut(s)	88, 388, 559, 778, 1013
Bme1390I	CCNGG	4 cut(s)	404, 438, 1063, 1139
Bme18I	GGWCC	1 cut(s)	567
BmgT120I	GGNCC	1 cut(s)	567
BmiI	GGNNCC	1 cut(s)	569
BmrFI	CCNGG	4 cut(s)	404, 438, 1063, 1139
BmrI	ACTGGG	1 cut(s)	987
BmsI	GCATC	4 cut(s)	527, 980, 1047, 1171
BmtI	GCTAGC	1 cut(s)	1082
BmuI	ACTGGG	1 cut(s)	987
Bpu14I	TTCGAA	1 cut(s)	36
BpuEI	CTTGAG	1 cut(s)	296
BsaAI	YACGTR	1 cut(s)	713
BsaJI	CCNNGG	4 cut(s)	531, 1061, 1062, 1138
Bsc4I	CCNNNNNNNGG	4 cut(s)	65, 265, 578, 1119
Bse1I	ACTGG	1 cut(s)	982
Bse3DI	GCAATG	3 cut(s)	76, 135, 519
BseBI	CCWGG	4 cut(s)	404, 438, 1063, 1139
BseDI	CCNNGG	4 cut(s)	531, 1061, 1062, 1138
BseGI	GGATG	4 cut(s)	542, 650, 1044, 1062
BseLI	CCNNNNNNNGG	4 cut(s)	65, 265, 578, 1119
BseMI	GCAATG	3 cut(s)	76, 135, 519
BseMII	CTCAG	1 cut(s)	1253
BseNI	ACTGG	1 cut(s)	982
BseRI	GAGGAG	1 cut(s)	1197
BseXI	GCAGC	4 cut(s)	398, 544, 763, 1023
BsgI	GTGCAG	1 cut(s)	1030
BshFI	GGCC	5 cut(s)	86, 436, 1041, 1112, 1267
BslFI	GGGAC	1 cut(s)	14
BslI	CCNNNNNNNGG	4 cut(s)	65, 265, 578, 1119
BsmAI	GTCTC	3 cut(s)	41, 458, 1139
BsmBI	CGTCTC	1 cut(s)	1139
BsmFI	GGGAC	1 cut(s)	14
BsnI	GGCC	5 cut(s)	86, 436, 1041, 1112, 1267
Bsp119I	TTCGAA	1 cut(s)	36
Bsp1286I	GDGCHC	1 cut(s)	60
Bsp143I	GATC	3 cut(s)	226, 691, 1000
BspACI	CCGC	5 cut(s)	5, 87, 185, 1123, 1135
BspANI	GGCC	5 cut(s)	86, 436, 1041, 1112, 1267
BspCNI	CTCAG	1 cut(s)	1252
BspLI	GGNNCC	1 cut(s)	569
BspMI	ACCTGC	1 cut(s)	1280
BspOI	GCTAGC	1 cut(s)	1082
BspPI	GGATC	2 cut(s)	221, 686
BspT104I	TTCGAA	1 cut(s)	36
BsrDI	GCAATG	3 cut(s)	76, 135, 519
BsrI	ACTGG	1 cut(s)	982
BssECI	CCNNGG	4 cut(s)	531, 1061, 1062, 1138
BssMI	GATC	3 cut(s)	226, 691, 1000
Bst2UI	CCWGG	4 cut(s)	404, 438, 1063, 1139
Bst4CI	ACNGT	5 cut(s)	294, 481, 592, 659, 670
Bst6I	CTCTTC	3 cut(s)	324, 329, 933
BstAPI	GCANNNNNTGC	1 cut(s)	521
BstBAI	YACGTR	1 cut(s)	713
BstBI	TTCGAA	1 cut(s)	36
BstC8I	GCNNGC	5 cut(s)	216, 517, 1080, 1121, 1186
BstDEI	CTNAG	1 cut(s)	1239
BstDSI	CCRYGG	1 cut(s)	531
BstENI	CCTNNNNNAGG	1 cut(s)	1117
BstF5I	GGATG	4 cut(s)	542, 650, 1044, 1062
BstH2I	RGCGCY	1 cut(s)	1166
BstHHI	GCGC	2 cut(s)	220, 1165
BstKTI	GATC	3 cut(s)	229, 694, 1003
BstMAI	GTCTC	3 cut(s)	41, 458, 1139
BstMBI	GATC	3 cut(s)	226, 691, 1000
BstMWI	GCNNNNNNNGC	1 cut(s)	521
BstNI	CCWGG	4 cut(s)	404, 438, 1063, 1139
BstSCI	CCNGG	4 cut(s)	402, 436, 1061, 1137
BstV1I	GCAGC	4 cut(s)	398, 544, 763, 1023
BstX2I	RGATCY	1 cut(s)	1000
BstYI	RGATCY	1 cut(s)	1000
BsuI	GTATCC	1 cut(s)	854
BsuRI	GGCC	5 cut(s)	86, 436, 1041, 1112, 1267
BtgI	CCRYGG	1 cut(s)	531
BtgZI	GCGATG	1 cut(s)	383
BtsCI	GGATG	4 cut(s)	542, 650, 1044, 1062
BtsI	GCAGTG	1 cut(s)	695
BtsIMutI	CAGTG	1 cut(s)	695
BveI	ACCTGC	1 cut(s)	1280
Cac8I	GCNNGC	5 cut(s)	216, 517, 1080, 1121, 1186
CfoI	GCGC	2 cut(s)	220, 1165
Cfr13I	GGNCC	1 cut(s)	567
CseI	GACGC	1 cut(s)	746
Csp6I	GTAC	2 cut(s)	295, 482
CviAII	CATG	4 cut(s)	635, 793, 887, 1021
CviQI	GTAC	2 cut(s)	295, 482
DdeI	CTNAG	1 cut(s)	1239
DpnI	GATC	3 cut(s)	228, 693, 1002
DpnII	GATC	3 cut(s)	226, 691, 1000
EaeI	YGGCCR	2 cut(s)	1039, 1265
Eam1104I	CTCTTC	3 cut(s)	324, 329, 933
EarI	CTCTTC	3 cut(s)	324, 329, 933
EciI	GGCGGA	1 cut(s)	20
Eco147I	AGGCCT	1 cut(s)	436
Eco24I	GRGCYC	1 cut(s)	60
Eco47I	GGWCC	1 cut(s)	567
Eco57I	CTGAAG	3 cut(s)	348, 411, 581
Eco72I	CACGTG	1 cut(s)	713
EcoNI	CCTNNNNNAGG	1 cut(s)	1117
EcoRII	CCWGG	4 cut(s)	402, 436, 1061, 1137
EcoT38I	GRGCYC	1 cut(s)	60
Esp3I	CGTCTC	1 cut(s)	1139
FaeI	CATG	4 cut(s)	638, 796, 890, 1024
FaqI	GGGAC	1 cut(s)	14
FatI	CATG	4 cut(s)	634, 792, 886, 1020
FblI	GTMKAC	1 cut(s)	320
Fnu4HI	GCNGC	5 cut(s)	87, 387, 558, 777, 1012
FokI	GGATG	4 cut(s)	549, 657, 1031, 1069
FriOI	GRGCYC	1 cut(s)	60
Fsp4HI	GCNGC	5 cut(s)	87, 387, 558, 777, 1012
FspBI	CTAG	2 cut(s)	1004, 1079
GlaI	GCGC	2 cut(s)	219, 1164
GluI	GCNGC	5 cut(s)	87, 387, 558, 777, 1012
HaeII	RGCGCY	1 cut(s)	1166
HaeIII	GGCC	5 cut(s)	86, 436, 1041, 1112, 1267
HgaI	GACGC	1 cut(s)	746
HhaI	GCGC	2 cut(s)	220, 1165
Hin1II	CATG	4 cut(s)	638, 796, 890, 1024
Hin6I	GCGC	2 cut(s)	218, 1163
HinP1I	GCGC	2 cut(s)	218, 1163
HincII	GTYRAC	3 cut(s)	250, 640, 655
HindII	GTYRAC	3 cut(s)	250, 640, 655
HinfI	GANTC	2 cut(s)	740, 797
HphI	GGTGA	3 cut(s)	293, 956, 1307
Hpy166II	GTNNAC	4 cut(s)	250, 321, 640, 655
Hpy188I	TCNGA	5 cut(s)	328, 411, 499, 848, 995
Hpy188III	TCNNGA	5 cut(s)	275, 509, 744, 1004, 1290
Hpy8I	GTNNAC	4 cut(s)	250, 321, 640, 655
Hpy99I	CGWCG	1 cut(s)	384
HpyCH4III	ACNGT	5 cut(s)	294, 481, 592, 659, 670
HpyCH4IV	ACGT	4 cut(s)	27, 349, 712, 874
HpyF10VI	GCNNNNNNNGC	1 cut(s)	521
HpyF3I	CTNAG	1 cut(s)	1239
HpySE526I	ACGT	4 cut(s)	27, 349, 712, 874
Hsp92II	CATG	4 cut(s)	638, 796, 890, 1024
HspAI	GCGC	2 cut(s)	218, 1163
Kzo9I	GATC	3 cut(s)	226, 691, 1000
LmnI	GCTCC	2 cut(s)	190, 922
Lsp1109I	GCAGC	4 cut(s)	398, 544, 763, 1023
LweI	GCATC	4 cut(s)	527, 980, 1047, 1171
MaeI	CTAG	2 cut(s)	1004, 1079
MaeII	ACGT	4 cut(s)	27, 349, 712, 874
MalI	GATC	3 cut(s)	228, 693, 1002
MboI	GATC	3 cut(s)	226, 691, 1000
MboII	GAAGA	7 cut(s)	50, 131, 166, 341, 346, 950, 1010
MfeI	CAATTG	2 cut(s)	957, 1073
MflI	RGATCY	1 cut(s)	1000
MhlI	GDGCHC	1 cut(s)	60
MlsI	TGGCCA	1 cut(s)	1041
MluNI	TGGCCA	1 cut(s)	1041
MlyI	GAGTC	1 cut(s)	749
MmeI	TCCRAC	1 cut(s)	324
Mox20I	TGGCCA	1 cut(s)	1041
MscI	TGGCCA	1 cut(s)	1041
MseI	TTAA	5 cut(s)	431, 491, 837, 1089, 1221
Msp20I	TGGCCA	1 cut(s)	1041
MspA1I	CMGCKG	1 cut(s)	389
MspR9I	CCNGG	4 cut(s)	404, 438, 1063, 1139
MunI	CAATTG	2 cut(s)	957, 1073
MvaI	CCWGG	4 cut(s)	404, 438, 1063, 1139
MwoI	GCNNNNNNNGC	1 cut(s)	521
NdeII	GATC	3 cut(s)	226, 691, 1000
NheI	GCTAGC	1 cut(s)	1078
NlaIII	CATG	4 cut(s)	638, 796, 890, 1024
NlaIV	GGNNCC	1 cut(s)	569
NspV	TTCGAA	1 cut(s)	36
PasI	CCCWGGG	1 cut(s)	1062
PceI	AGGCCT	1 cut(s)	436
PcsI	WCGNNNNNNNCGW	1 cut(s)	33
PfeI	GAWTC	1 cut(s)	797
PkrI	GCNGC	5 cut(s)	88, 388, 559, 778, 1013
PleI	GAGTC	1 cut(s)	748
PmaCI	CACGTG	1 cut(s)	713
PmlI	CACGTG	1 cut(s)	713
PpsI	GAGTC	1 cut(s)	748
Ppu21I	YACGTR	1 cut(s)	713
Psp6I	CCWGG	4 cut(s)	402, 436, 1061, 1137
PspCI	CACGTG	1 cut(s)	713
PspGI	CCWGG	4 cut(s)	402, 436, 1061, 1137
PspN4I	GGNNCC	1 cut(s)	569
PspPI	GGNCC	1 cut(s)	567
PsuI	RGATCY	1 cut(s)	1000
PvuII	CAGCTG	1 cut(s)	389
RsaI	GTAC	2 cut(s)	296, 483
RsaNI	GTAC	2 cut(s)	295, 482
SaqAI	TTAA	5 cut(s)	431, 491, 837, 1089, 1221
SatI	GCNGC	5 cut(s)	87, 387, 558, 777, 1012
Sau3AI	GATC	3 cut(s)	226, 691, 1000
Sau96I	GGNCC	1 cut(s)	567
SchI	GAGTC	1 cut(s)	749
ScrFI	CCNGG	4 cut(s)	404, 438, 1063, 1139
SduI	GDGCHC	1 cut(s)	60
SfaNI	GCATC	4 cut(s)	527, 980, 1047, 1171
SfuI	TTCGAA	1 cut(s)	36
SinI	GGWCC	1 cut(s)	567
SmlI	CTYRAG	1 cut(s)	275
SmoI	CTYRAG	1 cut(s)	275
SseBI	AGGCCT	1 cut(s)	436
SsiI	CCGC	5 cut(s)	5, 87, 185, 1123, 1135
SspMI	CTAG	2 cut(s)	1004, 1079
StuI	AGGCCT	1 cut(s)	436
StyD4I	CCNGG	4 cut(s)	402, 436, 1061, 1137
TaaI	ACNGT	5 cut(s)	294, 481, 592, 659, 670
TaiI	ACGT	4 cut(s)	30, 352, 715, 877
TaqI	TCGA	2 cut(s)	36, 382
TatI	WGTACW	1 cut(s)	294
TauI	GCSGC	1 cut(s)	89
TfiI	GAWTC	1 cut(s)	797
Tru1I	TTAA	5 cut(s)	431, 491, 837, 1089, 1221
Tru9I	TTAA	5 cut(s)	431, 491, 837, 1089, 1221
TscAI	CASTG	1 cut(s)	702
TseI	GCWGC	4 cut(s)	386, 557, 776, 1011
TspDTI	ATGAA	5 cut(s)	132, 386, 629, 875, 1037
TspGWI	ACGGA	2 cut(s)	499, 657
TspRI	CASTG	1 cut(s)	702
VpaK11BI	GGWCC	1 cut(s)	567
XagI	CCTNNNNNAGG	1 cut(s)	1117
XapI	RAATTY	8 cut(s)	13, 102, 285, 426, 882, 947, 1027, 1171
XbaI	TCTAGA	1 cut(s)	1003
XmiI	GTMKAC	1 cut(s)	320
XspI	CTAG	2 cut(s)	1004, 1079

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.