GMC oxidoreductase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD00G1005200.v1.1 MD03G1091500.v1.1 MD03G1091800.v1.1 |
| prunus_persica | Prupe.1G093400_v2.0.a1 Prupe.3G029300_v2.0.a1 |
| pyrus_communis | pycom10g23320 |
| rosa_chinensis | RchiOBHm_Chr1g0337911 RchiOBHm_Chr1g0376511 RchiOBHm_Chr2g0095811 RchiOBHm_Chr2g0103621 |
| rosa_laevigata | RLG00000016596 RLG00000017345 |
| rosa_multiflora | Rmu_co8084336.1_g000001 Rmu_co8272793.1_g000001 Rmu_sc0001530.1_g000021 Rmu_sc0004388.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00146080 |
| rosa_samantha | Rh1AG408100 Rh1BG371800 Rh1BG371900 Rh1CG385700 Rh1DG402900 Rh2AG164500 Rh2BG171600 Rh2CG171100 Rh2DG103400 Rh2DG169900 Rh4CG129100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 221 |
| AclWI | GGATC | 1 cut(s) | 238 |
| AcsI | RAATTY | 1 cut(s) | 22 |
| AfaI | GTAC | 1 cut(s) | 191 |
| AgsI | TTSAA | 1 cut(s) | 132 |
| AjnI | CCWGG | 1 cut(s) | 148 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 78, 110 |
| AluBI | AGCT | 1 cut(s) | 167 |
| AluI | AGCT | 1 cut(s) | 167 |
| AlwI | GGATC | 1 cut(s) | 238 |
| ApoI | RAATTY | 1 cut(s) | 22 |
| BccI | CCATC | 1 cut(s) | 119 |
| BciT130I | CCWGG | 1 cut(s) | 150 |
| Bme1390I | CCNGG | 1 cut(s) | 150 |
| BmrFI | CCNGG | 1 cut(s) | 150 |
| BmsI | GCATC | 1 cut(s) | 168 |
| BpuEI | CTTGAG | 1 cut(s) | 147 |
| BsaJI | CCNNGG | 2 cut(s) | 148, 226 |
| BseBI | CCWGG | 1 cut(s) | 150 |
| BseDI | CCNNGG | 2 cut(s) | 148, 226 |
| BseMII | CTCAG | 1 cut(s) | 104 |
| Bsp143I | GATC | 1 cut(s) | 230 |
| Bsp19I | CCATGG | 1 cut(s) | 226 |
| BspCNI | CTCAG | 1 cut(s) | 105 |
| BspHI | TCATGA | 1 cut(s) | 174 |
| BspPI | GGATC | 1 cut(s) | 238 |
| BssECI | CCNNGG | 2 cut(s) | 148, 226 |
| BssMI | GATC | 1 cut(s) | 230 |
| BssT1I | CCWWGG | 1 cut(s) | 226 |
| Bst2UI | CCWGG | 1 cut(s) | 150 |
| Bst4CI | ACNGT | 1 cut(s) | 172 |
| BstDEI | CTNAG | 1 cut(s) | 113 |
| BstDSI | CCRYGG | 1 cut(s) | 226 |
| BstKTI | GATC | 1 cut(s) | 233 |
| BstMBI | GATC | 1 cut(s) | 230 |
| BstNI | CCWGG | 1 cut(s) | 150 |
| BstSCI | CCNGG | 1 cut(s) | 148 |
| BtgI | CCRYGG | 1 cut(s) | 226 |
| CciI | TCATGA | 1 cut(s) | 174 |
| Csp6I | GTAC | 1 cut(s) | 190 |
| CviAII | CATG | 5 cut(s) | 50, 175, 193, 212, 227 |
| CviJI | RGCY | 1 cut(s) | 167 |
| CviKI_1 | RGCY | 1 cut(s) | 167 |
| CviQI | GTAC | 1 cut(s) | 190 |
| DdeI | CTNAG | 1 cut(s) | 113 |
| DpnI | GATC | 1 cut(s) | 232 |
| DpnII | GATC | 1 cut(s) | 230 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 221 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 221 |
| Eco130I | CCWWGG | 1 cut(s) | 226 |
| EcoRII | CCWGG | 1 cut(s) | 148 |
| EcoT14I | CCWWGG | 1 cut(s) | 226 |
| EcoT22I | ATGCAT | 1 cut(s) | 213 |
| ErhI | CCWWGG | 1 cut(s) | 226 |
| FaeI | CATG | 5 cut(s) | 53, 178, 196, 215, 230 |
| FatI | CATG | 5 cut(s) | 49, 174, 192, 211, 226 |
| FauNDI | CATATG | 1 cut(s) | 38 |
| Hin1II | CATG | 5 cut(s) | 53, 178, 196, 215, 230 |
| HinfI | GANTC | 1 cut(s) | 107 |
| Hpy188I | TCNGA | 1 cut(s) | 114 |
| Hpy188III | TCNNGA | 1 cut(s) | 175 |
| HpyAV | CCTTC | 1 cut(s) | 180 |
| HpyCH4III | ACNGT | 1 cut(s) | 172 |
| HpyCH4V | TGCA | 1 cut(s) | 211 |
| HpyF3I | CTNAG | 1 cut(s) | 113 |
| Hsp92II | CATG | 5 cut(s) | 53, 178, 196, 215, 230 |
| Kzo9I | GATC | 1 cut(s) | 230 |
| LpnPI | CCDG | 2 cut(s) | 135, 162 |
| LweI | GCATC | 1 cut(s) | 168 |
| MalI | GATC | 1 cut(s) | 232 |
| MboI | GATC | 1 cut(s) | 230 |
| MluCI | AATT | 2 cut(s) | 22, 244 |
| MmeI | TCCRAC | 1 cut(s) | 52 |
| MnlI | CCTC | 4 cut(s) | 47, 63, 108, 171 |
| Mph1103I | ATGCAT | 1 cut(s) | 213 |
| MslI | CAYNNNNRTG | 1 cut(s) | 48 |
| MspR9I | CCNGG | 1 cut(s) | 150 |
| MvaI | CCWGG | 1 cut(s) | 150 |
| NcoI | CCATGG | 1 cut(s) | 226 |
| NdeI | CATATG | 1 cut(s) | 38 |
| NdeII | GATC | 1 cut(s) | 230 |
| NlaIII | CATG | 5 cut(s) | 53, 178, 196, 215, 230 |
| NsiI | ATGCAT | 1 cut(s) | 213 |
| PagI | TCATGA | 1 cut(s) | 174 |
| PfeI | GAWTC | 1 cut(s) | 107 |
| Psp6I | CCWGG | 1 cut(s) | 148 |
| PspGI | CCWGG | 1 cut(s) | 148 |
| RsaI | GTAC | 1 cut(s) | 191 |
| RsaNI | GTAC | 1 cut(s) | 190 |
| RseI | CAYNNNNRTG | 1 cut(s) | 48 |
| Sau3AI | GATC | 1 cut(s) | 230 |
| ScrFI | CCNGG | 1 cut(s) | 150 |
| SetI | ASST | 3 cut(s) | 154, 169, 191 |
| SfaNI | GCATC | 1 cut(s) | 168 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 48 |
| SmlI | CTYRAG | 1 cut(s) | 162 |
| SmoI | CTYRAG | 1 cut(s) | 162 |
| Sse9I | AATT | 2 cut(s) | 22, 244 |
| StyD4I | CCNGG | 1 cut(s) | 148 |
| StyI | CCWWGG | 1 cut(s) | 226 |
| TaaI | ACNGT | 1 cut(s) | 172 |
| TasI | AATT | 2 cut(s) | 22, 244 |
| TfiI | GAWTC | 1 cut(s) | 107 |
| XapI | RAATTY | 1 cut(s) | 22 |
| Zsp2I | ATGCAT | 1 cut(s) | 213 |