Domain of unknown function (DUF4228)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03280 AT5G17350 |
| fragaria_vesca | FvH4_1g29020 FvH4_4g26170 |
| malus_domestica | MD00G1054000.v1.1 MD09G1258400.v1.1 MD13G1028700.v1.1 MD16G1031400.v1.1 |
| prunus_persica | Prupe.1G321600_v2.0.a1 Prupe.3G150600_v2.0.a1 |
| pyrus_communis | pycom09g17340 pycom13g02700 pycom16g02740 |
| rosa_chinensis | RchiOBHm_Chr3g0493681 RchiOBHm_Chr4g0433741 |
| rosa_laevigata | RLG00000006734 RLG00000006813 RLG00000022695 |
| rosa_multiflora | Rmu_co8212850.1_g000001 Rmu_co8336625.1_g000001 Rmu_sc0000568.1_g000022 Rmu_sc0002912.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00375180 |
| rosa_rugosa | Rorug03G0263400 Rorug04G0271300 |
| rosa_samantha | Rh3AG312400 Rh3BG348200 Rh3CG346000 Rh3DG348500 Rh4AG325700 Rh4BG333500 Rh4CG348700 Rh4DG330100 |
| rosa_wichuraiana | Rw3G027400 Rw4G028210 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 287, 499 |
| AccII | CGCG | 1 cut(s) | 458 |
| AciI | CCGC | 3 cut(s) | 303, 433, 456 |
| AclWI | GGATC | 1 cut(s) | 369 |
| AcsI | RAATTY | 1 cut(s) | 472 |
| AcyI | GRCGYC | 3 cut(s) | 272, 288, 500 |
| AdeI | CACNNNGTG | 1 cut(s) | 520 |
| AfaI | GTAC | 2 cut(s) | 105, 233 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 252 |
| AgsI | TTSAA | 3 cut(s) | 446, 472, 488 |
| AjnI | CCWGG | 2 cut(s) | 150, 587 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 458, 490, 533, 565 |
| AluBI | AGCT | 4 cut(s) | 116, 124, 194, 309 |
| AluI | AGCT | 4 cut(s) | 116, 124, 194, 309 |
| Alw21I | GWGCWC | 1 cut(s) | 126 |
| Alw26I | GTCTC | 3 cut(s) | 128, 171, 548 |
| AlwI | GGATC | 1 cut(s) | 369 |
| AoxI | GGCC | 1 cut(s) | 453 |
| ApeKI | GCWGC | 4 cut(s) | 56, 116, 314, 349 |
| ApoI | RAATTY | 1 cut(s) | 472 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 57, 89 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 187 |
| AspLEI | GCGC | 2 cut(s) | 290, 502 |
| AsuC2I | CCSGG | 1 cut(s) | 370 |
| AsuHPI | GGTGA | 2 cut(s) | 236, 292 |
| BanI | GGYRCC | 2 cut(s) | 287, 499 |
| BanII | GRGCYC | 1 cut(s) | 126 |
| BbsI | GAAGAC | 1 cut(s) | 216 |
| Bbv12I | GWGCWC | 1 cut(s) | 126 |
| BbvCI | CCTCAGC | 1 cut(s) | 357 |
| BbvI | GCAGC | 4 cut(s) | 68, 103, 326, 361 |
| BccI | CCATC | 1 cut(s) | 415 |
| BciT130I | CCWGG | 2 cut(s) | 152, 589 |
| BcnI | CCSGG | 1 cut(s) | 370 |
| BcoDI | GTCTC | 3 cut(s) | 128, 171, 548 |
| BfmI | CTRYAG | 2 cut(s) | 117, 558 |
| BfoI | RGCGCY | 2 cut(s) | 291, 503 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 311 |
| BisI | GCNGC | 5 cut(s) | 57, 117, 315, 350, 456 |
| BlsI | GCNGC | 5 cut(s) | 58, 118, 316, 351, 457 |
| Bme1390I | CCNGG | 3 cut(s) | 152, 370, 589 |
| BmiI | GGNNCC | 2 cut(s) | 289, 501 |
| BmrFI | CCNGG | 3 cut(s) | 152, 370, 589 |
| BpiI | GAAGAC | 1 cut(s) | 216 |
| Bpu10I | CCTNAGC | 1 cut(s) | 357 |
| BpuEI | CTTGAG | 1 cut(s) | 152 |
| BpuMI | CCSGG | 1 cut(s) | 370 |
| BsaHI | GRCGYC | 3 cut(s) | 272, 288, 500 |
| BsaI | GGTCTC | 1 cut(s) | 128 |
| BsaJI | CCNNGG | 1 cut(s) | 369 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 252 |
| Bse118I | RCCGGY | 2 cut(s) | 80, 352 |
| BseBI | CCWGG | 2 cut(s) | 152, 589 |
| BseDI | CCNNGG | 1 cut(s) | 369 |
| BseGI | GGATG | 2 cut(s) | 426, 484 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 252 |
| BseMII | CTCAG | 2 cut(s) | 348, 495 |
| BseRI | GAGGAG | 4 cut(s) | 410, 413, 416, 419 |
| BseXI | GCAGC | 4 cut(s) | 68, 103, 326, 361 |
| BsgI | GTGCAG | 1 cut(s) | 368 |
| Bsh1236I | CGCG | 1 cut(s) | 458 |
| Bsh1285I | CGRYCG | 1 cut(s) | 81 |
| BshFI | GGCC | 1 cut(s) | 455 |
| BshNI | GGYRCC | 2 cut(s) | 287, 499 |
| BsiEI | CGRYCG | 1 cut(s) | 81 |
| BsiHKAI | GWGCWC | 1 cut(s) | 126 |
| BsiSI | CCGG | 3 cut(s) | 81, 353, 369 |
| BslFI | GGGAC | 1 cut(s) | 59 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 252 |
| BsmAI | GTCTC | 3 cut(s) | 128, 171, 548 |
| BsmFI | GGGAC | 1 cut(s) | 59 |
| BsnI | GGCC | 1 cut(s) | 455 |
| Bso31I | GGTCTC | 1 cut(s) | 128 |
| Bsp1286I | GDGCHC | 1 cut(s) | 126 |
| Bsp143I | GATC | 1 cut(s) | 361 |
| BspACI | CCGC | 3 cut(s) | 303, 433, 456 |
| BspANI | GGCC | 1 cut(s) | 455 |
| BspCNI | CTCAG | 2 cut(s) | 349, 496 |
| BspFNI | CGCG | 1 cut(s) | 458 |
| BspLI | GGNNCC | 2 cut(s) | 289, 501 |
| BspMAI | CTGCAG | 1 cut(s) | 121 |
| BspPI | GGATC | 1 cut(s) | 369 |
| BspQI | GCTCTTC | 1 cut(s) | 561 |
| BspT107I | GGYRCC | 2 cut(s) | 287, 499 |
| BspTNI | GGTCTC | 1 cut(s) | 128 |
| BsrFI | RCCGGY | 2 cut(s) | 80, 352 |
| BssAI | RCCGGY | 2 cut(s) | 80, 352 |
| BssECI | CCNNGG | 1 cut(s) | 369 |
| BssMI | GATC | 1 cut(s) | 361 |
| BssNI | GRCGYC | 3 cut(s) | 272, 288, 500 |
| Bst2UI | CCWGG | 2 cut(s) | 152, 589 |
| Bst6I | CTCTTC | 2 cut(s) | 245, 561 |
| BstACI | GRCGYC | 3 cut(s) | 272, 288, 500 |
| BstC8I | GCNNGC | 3 cut(s) | 276, 307, 354 |
| BstDEI | CTNAG | 2 cut(s) | 357, 504 |
| BstF5I | GGATG | 2 cut(s) | 426, 484 |
| BstFNI | CGCG | 1 cut(s) | 458 |
| BstH2I | RGCGCY | 2 cut(s) | 291, 503 |
| BstHHI | GCGC | 2 cut(s) | 290, 502 |
| BstKTI | GATC | 1 cut(s) | 364 |
| BstMAI | GTCTC | 3 cut(s) | 128, 171, 548 |
| BstMBI | GATC | 1 cut(s) | 361 |
| BstMCI | CGRYCG | 1 cut(s) | 81 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 200, 311 |
| BstNI | CCWGG | 2 cut(s) | 152, 589 |
| BstSCI | CCNGG | 3 cut(s) | 150, 368, 587 |
| BstSFI | CTRYAG | 2 cut(s) | 117, 558 |
| BstUI | CGCG | 1 cut(s) | 458 |
| BstV1I | GCAGC | 4 cut(s) | 68, 103, 326, 361 |
| BstV2I | GAAGAC | 1 cut(s) | 216 |
| BsuRI | GGCC | 1 cut(s) | 455 |
| BtsCI | GGATG | 2 cut(s) | 426, 484 |
| Cac8I | GCNNGC | 3 cut(s) | 276, 307, 354 |
| CfoI | GCGC | 2 cut(s) | 290, 502 |
| Cfr10I | RCCGGY | 2 cut(s) | 80, 352 |
| CseI | GACGC | 2 cut(s) | 280, 311 |
| Csp6I | GTAC | 2 cut(s) | 104, 232 |
| CviAII | CATG | 7 cut(s) | 127, 238, 247, 283, 340, 449, 511 |
| CviQI | GTAC | 2 cut(s) | 104, 232 |
| DdeI | CTNAG | 2 cut(s) | 357, 504 |
| DinI | GGCGCC | 2 cut(s) | 289, 501 |
| DpnI | GATC | 1 cut(s) | 363 |
| DpnII | GATC | 1 cut(s) | 361 |
| DraIII | CACNNNGTG | 1 cut(s) | 520 |
| Eam1104I | CTCTTC | 2 cut(s) | 245, 561 |
| EarI | CTCTTC | 2 cut(s) | 245, 561 |
| Ecl136II | GAGCTC | 1 cut(s) | 124 |
| Eco24I | GRGCYC | 1 cut(s) | 126 |
| Eco31I | GGTCTC | 1 cut(s) | 128 |
| Eco53kI | GAGCTC | 1 cut(s) | 124 |
| EcoICRI | GAGCTC | 1 cut(s) | 124 |
| EcoRII | CCWGG | 2 cut(s) | 150, 587 |
| EcoT38I | GRGCYC | 1 cut(s) | 126 |
| EgeI | GGCGCC | 2 cut(s) | 289, 501 |
| EheI | GGCGCC | 2 cut(s) | 289, 501 |
| FaeI | CATG | 7 cut(s) | 130, 241, 250, 286, 343, 452, 514 |
| FaqI | GGGAC | 1 cut(s) | 59 |
| FatI | CATG | 7 cut(s) | 126, 237, 246, 282, 339, 448, 510 |
| FauI | CCCGC | 1 cut(s) | 426 |
| Fnu4HI | GCNGC | 5 cut(s) | 57, 117, 315, 350, 456 |
| FokI | GGATG | 2 cut(s) | 433, 491 |
| FriOI | GRGCYC | 1 cut(s) | 126 |
| Fsp4HI | GCNGC | 5 cut(s) | 57, 117, 315, 350, 456 |
| GlaI | GCGC | 2 cut(s) | 289, 501 |
| GluI | GCNGC | 5 cut(s) | 57, 117, 315, 350, 456 |
| HaeII | RGCGCY | 2 cut(s) | 291, 503 |
| HaeIII | GGCC | 1 cut(s) | 455 |
| HapII | CCGG | 3 cut(s) | 81, 353, 369 |
| HgaI | GACGC | 2 cut(s) | 280, 311 |
| HhaI | GCGC | 2 cut(s) | 290, 502 |
| Hin1I | GRCGYC | 3 cut(s) | 272, 288, 500 |
| Hin1II | CATG | 7 cut(s) | 130, 241, 250, 286, 343, 452, 514 |
| Hin6I | GCGC | 2 cut(s) | 288, 500 |
| HinP1I | GCGC | 2 cut(s) | 288, 500 |
| HpaII | CCGG | 3 cut(s) | 81, 353, 369 |
| HphI | GGTGA | 2 cut(s) | 236, 292 |
| Hpy166II | GTNNAC | 2 cut(s) | 157, 232 |
| Hpy188III | TCNNGA | 3 cut(s) | 76, 268, 443 |
| Hpy8I | GTNNAC | 2 cut(s) | 157, 232 |
| HpyCH4IV | ACGT | 2 cut(s) | 12, 234 |
| HpyCH4V | TGCA | 4 cut(s) | 21, 119, 349, 514 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 200, 311 |
| HpyF3I | CTNAG | 2 cut(s) | 357, 504 |
| HpySE526I | ACGT | 2 cut(s) | 12, 234 |
| Hsp92I | GRCGYC | 3 cut(s) | 272, 288, 500 |
| Hsp92II | CATG | 7 cut(s) | 130, 241, 250, 286, 343, 452, 514 |
| HspAI | GCGC | 2 cut(s) | 288, 500 |
| KasI | GGCGCC | 2 cut(s) | 287, 499 |
| KroI | GCCGGC | 1 cut(s) | 352 |
| KroNI | GCCGGC | 1 cut(s) | 354 |
| Kzo9I | GATC | 1 cut(s) | 361 |
| LguI | GCTCTTC | 1 cut(s) | 561 |
| Lsp1109I | GCAGC | 4 cut(s) | 68, 103, 326, 361 |
| MaeII | ACGT | 2 cut(s) | 12, 234 |
| MaeIII | GTNAC | 1 cut(s) | 268 |
| MalI | GATC | 1 cut(s) | 363 |
| MboI | GATC | 1 cut(s) | 361 |
| MboII | GAAGA | 7 cut(s) | 139, 192, 195, 221, 262, 500, 578 |
| MhlI | GDGCHC | 1 cut(s) | 126 |
| MluCI | AATT | 3 cut(s) | 95, 427, 472 |
| Mly113I | GGCGCC | 2 cut(s) | 288, 500 |
| MmeI | TCCRAC | 1 cut(s) | 531 |
| MroNI | GCCGGC | 1 cut(s) | 352 |
| MroXI | GAANNNNTTC | 1 cut(s) | 187 |
| MslI | CAYNNNNRTG | 1 cut(s) | 344 |
| MspI | CCGG | 3 cut(s) | 81, 353, 369 |
| MspR9I | CCNGG | 3 cut(s) | 152, 370, 589 |
| MvaI | CCWGG | 2 cut(s) | 152, 589 |
| MvnI | CGCG | 1 cut(s) | 458 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 200, 311 |
| NaeI | GCCGGC | 1 cut(s) | 354 |
| NarI | GGCGCC | 2 cut(s) | 288, 500 |
| NciI | CCSGG | 1 cut(s) | 370 |
| NdeII | GATC | 1 cut(s) | 361 |
| NgoMIV | GCCGGC | 1 cut(s) | 352 |
| NlaIII | CATG | 7 cut(s) | 130, 241, 250, 286, 343, 452, 514 |
| NlaIV | GGNNCC | 2 cut(s) | 289, 501 |
| NmeAIII | GCCGAG | 2 cut(s) | 290, 476 |
| NmuCI | GTSAC | 1 cut(s) | 268 |
| PciSI | GCTCTTC | 1 cut(s) | 561 |
| PdiI | GCCGGC | 1 cut(s) | 354 |
| PdmI | GAANNNNTTC | 1 cut(s) | 187 |
| PkrI | GCNGC | 5 cut(s) | 58, 118, 316, 351, 457 |
| PluTI | GGCGCC | 2 cut(s) | 291, 503 |
| Psp124BI | GAGCTC | 1 cut(s) | 126 |
| Psp6I | CCWGG | 2 cut(s) | 150, 587 |
| PspGI | CCWGG | 2 cut(s) | 150, 587 |
| PspN4I | GGNNCC | 2 cut(s) | 289, 501 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 224, 256 |
| PstI | CTGCAG | 1 cut(s) | 121 |
| RsaI | GTAC | 2 cut(s) | 105, 233 |
| RsaNI | GTAC | 2 cut(s) | 104, 232 |
| RseI | CAYNNNNRTG | 1 cut(s) | 344 |
| SacI | GAGCTC | 1 cut(s) | 126 |
| SapI | GCTCTTC | 1 cut(s) | 561 |
| SatI | GCNGC | 5 cut(s) | 57, 117, 315, 350, 456 |
| Sau3AI | GATC | 1 cut(s) | 361 |
| ScrFI | CCNGG | 3 cut(s) | 152, 370, 589 |
| SduI | GDGCHC | 1 cut(s) | 126 |
| SetI | ASST | 8 cut(s) | 15, 118, 126, 196, 237, 311, 536, 593 |
| SfcI | CTRYAG | 2 cut(s) | 117, 558 |
| SfoI | GGCGCC | 2 cut(s) | 289, 501 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 344 |
| SmlI | CTYRAG | 1 cut(s) | 131 |
| SmoI | CTYRAG | 1 cut(s) | 131 |
| Sse9I | AATT | 3 cut(s) | 95, 427, 472 |
| SsiI | CCGC | 3 cut(s) | 303, 433, 456 |
| SspDI | GGCGCC | 2 cut(s) | 287, 499 |
| SstI | GAGCTC | 1 cut(s) | 126 |
| StyD4I | CCNGG | 3 cut(s) | 150, 368, 587 |
| TaiI | ACGT | 2 cut(s) | 15, 237 |
| TasI | AATT | 3 cut(s) | 95, 427, 472 |
| TauI | GCSGC | 1 cut(s) | 458 |
| TseFI | GTSAC | 1 cut(s) | 268 |
| TseI | GCWGC | 4 cut(s) | 56, 116, 314, 349 |
| Tsp45I | GTSAC | 1 cut(s) | 268 |
| TspDTI | ATGAA | 4 cut(s) | 125, 222, 263, 499 |
| XapI | RAATTY | 1 cut(s) | 472 |
| XmnI | GAANNNNTTC | 1 cut(s) | 187 |