Prupe.3G232700_v2.0.a1

Formiminotransferase domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
22910386 .. 22912610
2225 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G232700.2

Sequence Viewer

Length: 957 bp
ATGGATCAAAGCCCAGCTTGCAAGGACAAGAAGAAGAAAACCATAGACCAGTCCATGCTACTCTGCTGTAAGCTTTACATATCTGAATCGCGCAACCACGCTGCTCTGGACGCCATTGAACGTGCTGCCAGGCTCGATCCAGAGTCTGTCATTGTTAACAAGTTTGAGGACCGAGCTTACAATAGGGTCAGGTACACTATTGTGTCCTATGTTATGCATGATAGCACAGGGAGTGCCATATATAGCCCCTTGCAGCAAACTGTAATGGCCATGGCTGAGGCAGCCTTTGGAGCCATTAACCTTGAGCAGCACTCCGGGGCTCACCCTCGGCTAGGGGTTGTCGACGACATTGTCTTCCACCCGTTGGCTAGGGCATCTCTGGATGAAGCTGCTTGGCTTGCCAAGGCAGTGGCAGTGGACATTGGCAATAGGTTCCAAGTGCCAGTATATCTGTATGCTGCAGCACACCCTACAGGCAAGGCCCTTGACACCATCAGGCGTGAGCTTGGCTACTACAGACCCAATTTCATGGGCAGCCAATGGGCAGGATGGACAATGCCAGAAATCCTCCATGAAAAGCCTGACGAAGGGCCAACTAGTATATGCCCCGCCAGAGGCATCTCGATGATCGGGGCACGTCCATGGGTTGCCTTGTACAACATACCCATATTGTCCACGGATGTTGCAGCCACTCGACGGATTGCACGGATGGTGAGTGCCCGAGGGGGCGGACTCCCAACTGTGCAAACACTGGGCCTTGTTCATGGTGAGGACTCCACAGAGATAGCTTGCATGCTCCTAGAGCCCAACCAGATTGGAGGGGACAGAGTCCAGAACCATGTTGAGATGCTAGCGGCTCAAGAAGGGTTGGATGTGGAGAAGGGTTACTTCACTGATCACTCACCAGATATGATTATTGAAAAGTATATGAAACTAACTTCTGAAGACACAAACTAA

Protein Analysis

319

Amino Acids

35.1

Weight (kDa)

5.82

Isoelectric Point (pI)

43.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 350
AccB7I CCANNNNNTGG 1 cut(s) 364
AccI GTMKAC 1 cut(s) 342
AccII CGCG 1 cut(s) 91
AciI CCGC 3 cut(s) 609, 729, 854
AclWI GGATC 2 cut(s) 12, 131
AcoI YGGCCR 1 cut(s) 267
AcyI GRCGYC 1 cut(s) 111
AfaI GTAC 2 cut(s) 194, 656
AfiI CCNNNNNNNGG 5 cut(s) 332, 364, 587, 614, 696
AgsI TTSAA 2 cut(s) 119, 920
AhlI ACTAGT 1 cut(s) 596
AjiI CACGTC 1 cut(s) 638
AjnI CCWGG 1 cut(s) 128
AleI CACNNNNGTG 1 cut(s) 200
AluBI AGCT 6 cut(s) 17, 73, 176, 389, 505, 788
AluI AGCT 6 cut(s) 17, 73, 176, 389, 505, 788
AlwI GGATC 2 cut(s) 12, 131
AlwNI CAGNNNCTG 1 cut(s) 146
Ama87I CYCGRG 1 cut(s) 720
AoxI GGCC 4 cut(s) 267, 480, 590, 754
AspLEI GCGC 1 cut(s) 93
AspS9I GGNCC 4 cut(s) 169, 481, 590, 754
AsuC2I CCSGG 1 cut(s) 316
AsuHPI GGTGA 4 cut(s) 314, 724, 779, 894
AsuNHI GCTAGC 1 cut(s) 850
AvaI CYCGRG 1 cut(s) 720
AvaII GGWCC 1 cut(s) 169
BaeGI GKGCMC 2 cut(s) 637, 721
BalI TGGCCA 1 cut(s) 269
BanII GRGCYC 2 cut(s) 322, 807
BbsI GAAGAC 2 cut(s) 346, 951
BbvCI CCTCAGC 1 cut(s) 276
BccI CCATC 3 cut(s) 500, 543, 703
BciT130I CCWGG 1 cut(s) 130
BclI TGATCA 1 cut(s) 895
BcnI CCSGG 1 cut(s) 316
BcuI ACTAGT 1 cut(s) 596
BfaI CTAG 5 cut(s) 332, 369, 597, 800, 851
BfmI CTRYAG 3 cut(s) 459, 471, 514
Bme1390I CCNGG 2 cut(s) 130, 316
Bme18I GGWCC 1 cut(s) 169
BmeT110I CYCGRG 1 cut(s) 720
BmgBI CACGTC 1 cut(s) 638
BmgT120I GGNCC 4 cut(s) 169, 481, 590, 754
BmiI GGNNCC 2 cut(s) 292, 434
BmrFI CCNGG 2 cut(s) 130, 316
BmrI ACTGGG 1 cut(s) 761
BmsI GCATC 3 cut(s) 383, 627, 837
BmtI GCTAGC 1 cut(s) 854
BmuI ACTGGG 1 cut(s) 761
BpiI GAAGAC 2 cut(s) 346, 951
BplI GAGNNNNNCTC 2 cut(s) 296, 328
Bpu10I CCTNAGC 1 cut(s) 276
BpuEI CTTGAG 2 cut(s) 323, 843
BpuMI CCSGG 1 cut(s) 316
BsaHI GRCGYC 1 cut(s) 111
BsaJI CCNNGG 7 cut(s) 270, 315, 326, 402, 641, 675, 721
Bsc4I CCNNNNNNNGG 5 cut(s) 332, 364, 587, 614, 696
Bse1I ACTGG 3 cut(s) 49, 443, 756
BseBI CCWGG 1 cut(s) 130
BseDI CCNNGG 7 cut(s) 270, 315, 326, 402, 641, 675, 721
BseGI GGATG 5 cut(s) 388, 554, 685, 714, 877
BseLI CCNNNNNNNGG 5 cut(s) 332, 364, 587, 614, 696
BseMII CTCAG 1 cut(s) 267
BseNI ACTGG 3 cut(s) 49, 443, 756
BseSI GKGCMC 2 cut(s) 637, 721
BseYI CCCAGC 1 cut(s) 13
Bsh1236I CGCG 1 cut(s) 91
BshFI GGCC 4 cut(s) 269, 482, 592, 756
BsiHKCI CYCGRG 1 cut(s) 720
BsiSI CCGG 1 cut(s) 315
BslFI GGGAC 1 cut(s) 836
BslI CCNNNNNNNGG 5 cut(s) 332, 364, 587, 614, 696
BsmFI GGGAC 1 cut(s) 836
BsnI GGCC 4 cut(s) 269, 482, 592, 756
BsoBI CYCGRG 1 cut(s) 720
Bsp1286I GDGCHC 4 cut(s) 322, 637, 721, 807
Bsp1407I TGTACA 1 cut(s) 654
Bsp143I GATC 4 cut(s) 4, 136, 627, 895
Bsp19I CCATGG 2 cut(s) 270, 641
BspACI CCGC 3 cut(s) 609, 729, 854
BspANI GGCC 4 cut(s) 269, 482, 592, 756
BspCNI CTCAG 1 cut(s) 268
BspFNI CGCG 1 cut(s) 91
BspLI GGNNCC 2 cut(s) 292, 434
BspMAI CTGCAG 1 cut(s) 463
BspOI GCTAGC 1 cut(s) 854
BspPI GGATC 2 cut(s) 12, 131
BsrGI TGTACA 1 cut(s) 654
BsrI ACTGG 3 cut(s) 49, 443, 756
BssECI CCNNGG 7 cut(s) 270, 315, 326, 402, 641, 675, 721
BssMI GATC 4 cut(s) 4, 136, 627, 895
BssNI GRCGYC 1 cut(s) 111
BssT1I CCWWGG 3 cut(s) 270, 402, 641
Bst2UI CCWGG 1 cut(s) 130
Bst4CI ACNGT 2 cut(s) 262, 742
BstACI GRCGYC 1 cut(s) 111
BstAUI TGTACA 1 cut(s) 654
BstC8I GCNNGC 5 cut(s) 19, 399, 790, 794, 852
BstDEI CTNAG 1 cut(s) 276
BstDSI CCRYGG 3 cut(s) 270, 641, 675
BstENI CCTNNNNNAGG 2 cut(s) 330, 585
BstF5I GGATG 5 cut(s) 388, 554, 685, 714, 877
BstFNI CGCG 1 cut(s) 91
BstHHI GCGC 1 cut(s) 93
BstKTI GATC 4 cut(s) 7, 139, 630, 898
BstMBI GATC 4 cut(s) 4, 136, 627, 895
BstMWI GCNNNNNNNGC 6 cut(s) 18, 110, 281, 290, 398, 802
BstNI CCWGG 1 cut(s) 130
BstNSI RCATGY 1 cut(s) 796
BstSCI CCNGG 2 cut(s) 128, 314
BstSFI CTRYAG 3 cut(s) 459, 471, 514
BstSLI GKGCMC 2 cut(s) 637, 721
BstUI CGCG 1 cut(s) 91
BstV2I GAAGAC 2 cut(s) 346, 951
BstXI CCANNNNNNTGG 2 cut(s) 409, 529
BsuRI GGCC 4 cut(s) 269, 482, 592, 756
BtgI CCRYGG 3 cut(s) 270, 641, 675
BtrI CACGTC 1 cut(s) 638
BtsCI GGATG 5 cut(s) 388, 554, 685, 714, 877
BtsI GCAGTG 2 cut(s) 414, 420
BtsIMutI CAGTG 4 cut(s) 414, 420, 749, 891
Cac8I GCNNGC 5 cut(s) 19, 399, 790, 794, 852
CaiI CAGNNNCTG 1 cut(s) 146
CfoI GCGC 1 cut(s) 93
Cfr13I GGNCC 4 cut(s) 169, 481, 590, 754
CseI GACGC 1 cut(s) 119
Csp6I GTAC 2 cut(s) 193, 655
CspCI CAANNNNNGTGG 2 cut(s) 664, 699
CviAII CATG 9 cut(s) 55, 218, 271, 529, 572, 642, 764, 793, 839
CviQI GTAC 2 cut(s) 193, 655
DdeI CTNAG 1 cut(s) 276
DpnI GATC 4 cut(s) 6, 138, 629, 897
DpnII GATC 4 cut(s) 4, 136, 627, 895
DrdI GACNNNNNNGTC 1 cut(s) 350
DseDI GACNNNNNNGTC 1 cut(s) 350
EaeI YGGCCR 1 cut(s) 267
EciI GGCGGA 1 cut(s) 744
Eco130I CCWWGG 3 cut(s) 270, 402, 641
Eco24I GRGCYC 2 cut(s) 322, 807
Eco47I GGWCC 1 cut(s) 169
Eco88I CYCGRG 1 cut(s) 720
EcoNI CCTNNNNNAGG 2 cut(s) 330, 585
EcoO109I RGGNCCY 1 cut(s) 481
EcoRII CCWGG 1 cut(s) 128
EcoT14I CCWWGG 3 cut(s) 270, 402, 641
EcoT22I ATGCAT 1 cut(s) 219
EcoT38I GRGCYC 2 cut(s) 322, 807
ErhI CCWWGG 3 cut(s) 270, 402, 641
FaeI CATG 9 cut(s) 58, 221, 274, 532, 575, 645, 767, 796, 842
FalI AAGNNNNNCTT 3 cut(s) 33, 872, 904
FaqI GGGAC 1 cut(s) 836
FatI CATG 9 cut(s) 54, 217, 270, 528, 571, 641, 763, 792, 838
FauI CCCGC 1 cut(s) 616
FbaI TGATCA 1 cut(s) 895
FblI GTMKAC 1 cut(s) 342
FokI GGATG 5 cut(s) 395, 561, 692, 721, 884
FriOI GRGCYC 2 cut(s) 322, 807
FspBI CTAG 5 cut(s) 332, 369, 597, 800, 851
GlaI GCGC 1 cut(s) 92
GsaI CCCAGC 1 cut(s) 17
HaeIII GGCC 4 cut(s) 269, 482, 592, 756
HapII CCGG 1 cut(s) 315
HgaI GACGC 1 cut(s) 119
HhaI GCGC 1 cut(s) 93
Hin1I GRCGYC 1 cut(s) 111
Hin1II CATG 9 cut(s) 58, 221, 274, 532, 575, 645, 767, 796, 842
Hin6I GCGC 1 cut(s) 91
HinP1I GCGC 1 cut(s) 91
HincII GTYRAC 2 cut(s) 157, 343
HindII GTYRAC 2 cut(s) 157, 343
HindIII AAGCTT 1 cut(s) 71
HinfI GANTC 5 cut(s) 86, 143, 732, 773, 828
HpaI GTTAAC 1 cut(s) 157
HpaII CCGG 1 cut(s) 315
HphI GGTGA 4 cut(s) 314, 724, 779, 894
Hpy166II GTNNAC 5 cut(s) 157, 195, 343, 418, 675
Hpy188I TCNGA 2 cut(s) 85, 943
Hpy188III TCNNGA 6 cut(s) 107, 140, 380, 622, 832, 860
Hpy8I GTNNAC 5 cut(s) 157, 195, 343, 418, 675
Hpy99I CGWCG 2 cut(s) 347, 699
HpyAV CCTTC 3 cut(s) 581, 857, 874
HpyCH4III ACNGT 2 cut(s) 262, 742
HpyCH4IV ACGT 2 cut(s) 121, 637
HpyCH4V TGCA 8 cut(s) 21, 217, 253, 461, 686, 704, 745, 792
HpyF10VI GCNNNNNNNGC 6 cut(s) 18, 110, 281, 290, 398, 802
HpyF3I CTNAG 1 cut(s) 276
HpySE526I ACGT 2 cut(s) 121, 637
Hsp92I GRCGYC 1 cut(s) 111
Hsp92II CATG 9 cut(s) 58, 221, 274, 532, 575, 645, 767, 796, 842
HspAI GCGC 1 cut(s) 91
Ksp22I TGATCA 1 cut(s) 895
KspAI GTTAAC 1 cut(s) 157
Kzo9I GATC 4 cut(s) 4, 136, 627, 895
LmnI GCTCC 2 cut(s) 290, 801
LweI GCATC 3 cut(s) 383, 627, 837
MaeI CTAG 5 cut(s) 332, 369, 597, 800, 851
MaeII ACGT 2 cut(s) 121, 637
MaeIII GTNAC 1 cut(s) 884
MalI GATC 4 cut(s) 6, 138, 629, 897
MboI GATC 4 cut(s) 4, 136, 627, 895
MboII GAAGA 4 cut(s) 43, 46, 346, 956
MhlI GDGCHC 4 cut(s) 322, 637, 721, 807
MlsI TGGCCA 1 cut(s) 269
MluCI AATT 1 cut(s) 523
MluNI TGGCCA 1 cut(s) 269
MlyI GAGTC 4 cut(s) 152, 726, 767, 837
MmeI TCCRAC 1 cut(s) 849
MnlI CCTC 8 cut(s) 160, 271, 336, 578, 608, 716, 763, 812
Mox20I TGGCCA 1 cut(s) 269
Mph1103I ATGCAT 1 cut(s) 219
MscI TGGCCA 1 cut(s) 269
MseI TTAA 2 cut(s) 156, 297
MslI CAYNNNNRTG 3 cut(s) 200, 623, 640
Msp20I TGGCCA 1 cut(s) 269
MspI CCGG 1 cut(s) 315
MspR9I CCNGG 2 cut(s) 130, 316
MvaI CCWGG 1 cut(s) 130
MvnI CGCG 1 cut(s) 91
MwoI GCNNNNNNNGC 6 cut(s) 18, 110, 281, 290, 398, 802
NciI CCSGG 1 cut(s) 316
NcoI CCATGG 2 cut(s) 270, 641
NdeII GATC 4 cut(s) 4, 136, 627, 895
NheI GCTAGC 1 cut(s) 850
NlaIII CATG 9 cut(s) 58, 221, 274, 532, 575, 645, 767, 796, 842
NlaIV GGNNCC 2 cut(s) 292, 434
NmeAIII GCCGAG 1 cut(s) 307
NsiI ATGCAT 1 cut(s) 219
NspI RCATGY 1 cut(s) 796
OliI CACNNNNGTG 1 cut(s) 200
PaeI GCATGC 1 cut(s) 796
PfeI GAWTC 1 cut(s) 86
PflFI GACNNNGTC 2 cut(s) 350, 827
PflMI CCANNNNNTGG 1 cut(s) 364
PleI GAGTC 4 cut(s) 151, 726, 767, 836
PpsI GAGTC 4 cut(s) 151, 726, 767, 836
Psp6I CCWGG 1 cut(s) 128
PspFI CCCAGC 1 cut(s) 13
PspGI CCWGG 1 cut(s) 128
PspN4I GGNNCC 2 cut(s) 292, 434
PspPI GGNCC 4 cut(s) 169, 481, 590, 754
PstI CTGCAG 1 cut(s) 463
PstNI CAGNNNCTG 1 cut(s) 146
PsyI GACNNNGTC 2 cut(s) 350, 827
RsaI GTAC 2 cut(s) 194, 656
RsaNI GTAC 2 cut(s) 193, 655
RseI CAYNNNNRTG 3 cut(s) 200, 623, 640
SalI GTCGAC 1 cut(s) 341
SaqAI TTAA 2 cut(s) 156, 297
Sau3AI GATC 4 cut(s) 4, 136, 627, 895
Sau96I GGNCC 4 cut(s) 169, 481, 590, 754
SchI GAGTC 4 cut(s) 152, 726, 767, 837
ScrFI CCNGG 2 cut(s) 130, 316
SduI GDGCHC 4 cut(s) 322, 637, 721, 807
SfaNI GCATC 3 cut(s) 383, 627, 837
SfcI CTRYAG 3 cut(s) 459, 471, 514
SinI GGWCC 1 cut(s) 169
SmiMI CAYNNNNRTG 3 cut(s) 200, 623, 640
SmlI CTYRAG 2 cut(s) 302, 858
SmoI CTYRAG 2 cut(s) 302, 858
SpeI ACTAGT 1 cut(s) 596
SphI GCATGC 1 cut(s) 796
Sse9I AATT 1 cut(s) 523
SsiI CCGC 3 cut(s) 609, 729, 854
SspMI CTAG 5 cut(s) 332, 369, 597, 800, 851
StyD4I CCNGG 2 cut(s) 128, 314
StyI CCWWGG 3 cut(s) 270, 402, 641
TaaI ACNGT 2 cut(s) 262, 742
TaiI ACGT 2 cut(s) 124, 640
TaqI TCGA 4 cut(s) 135, 342, 623, 694
TaqII GACCGA 1 cut(s) 186
TasI AATT 1 cut(s) 523
TatI WGTACW 1 cut(s) 654
TauI GCSGC 1 cut(s) 857
TfiI GAWTC 1 cut(s) 86
Tru1I TTAA 2 cut(s) 156, 297
Tru9I TTAA 2 cut(s) 156, 297
TscAI CASTG 4 cut(s) 414, 420, 756, 898
TspDTI ATGAA 5 cut(s) 399, 517, 588, 752, 944
TspGWI ACGGA 3 cut(s) 692, 712, 721
TspRI CASTG 4 cut(s) 414, 420, 756, 898
Tth111I GACNNNGTC 2 cut(s) 350, 827
Van91I CCANNNNNTGG 1 cut(s) 364
VpaK11BI GGWCC 1 cut(s) 169
XagI CCTNNNNNAGG 2 cut(s) 330, 585
XceI RCATGY 1 cut(s) 796
XmiI GTMKAC 1 cut(s) 342
XspI CTAG 5 cut(s) 332, 369, 597, 800, 851
Zsp2I ATGCAT 1 cut(s) 219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.