Rh2AG560400

Formiminotransferase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0001831
Physical Location & Seq
Forward (+)
79064263 .. 79066001
1739 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG560400.1

Sequence Viewer

Length: 972 bp
ATGTTATACACTATGAACATCAAAGAGCGCTGTTTTCGATATGCTTGTAATGAGCAGCAAGGAGGAGAGAAAATGTTAAAATCAATGCTTGGTTGCTGCAAGGTGTACATATCTGAAAGCAGAAATAGGCTTGCACTGGAGTCAATTGAGCGAGCTGCTAAGCGATTCTCGGAAGCACCCATTGTCAATAAGTTTGAAGATGAAACTTACAACAGAGTTGGCTACACTCTTGTCTCTAAGCTGGCTCAAAAGCCATCTGGGAACCCTTGTCCCTTGAGGATGGCTGTCCTTGCCATGGTTAAGGCTGCTTTTGAAACCATTGACCTTGAGTCGCACTGTGGAAGTCATCCCCGGCTTGGAGTTGTGGATCATATATGCTTTCACCCCCTTCTTGGTGCTTCGTTGGAACAGATGGCTGGTGTTGCAGACTCCTTAGCGGCAGATGTTGGCTCTAGTCTTCAAGTTCCTACATTTCTATATGGAGCTGCCCATGAAGAGAGGAGGGCACTTGATTCAATTAGAAGAGAGCTCGGTTACTTCAAGCCAAACTCTAGTGGAGAACAGTGGGTTGGGGGTCCAAAATCGGAATACTTGGCACTGAAGCCAGAGAAAGGTCCCCCTAAAGTGACTCAAGAGAAAGGTGTCATTGTGATTGGAGCAACCCGGTGGGTGGATAATTATAATGTCCCTGTCCACTCTACTGATATTGCTGCTGTTCGTAGAATTTCGAAACGTGTGAGTGGCAGAGGAGGTGGACTTCCTTCAGTCCAAGCAATGGCCCTTGCGCATGGTGAATCTGTCACAGAGGTAGCTTGCAATTTGTTGGAACCACAGGAAGTGGGAGGAGATAGGGTTCAGCTTGAAGTTGAGAGGCTTGCAAAGGAAGAAGGTTTGACAGTGGGGAAGGGCTACTTCACTGATCTTTCTCAAGAAAAATTAATTGAAAGGTATTTGCAATCAGTTTCTGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FTCD_N Yae1_N

Protein Analysis

323

Amino Acids

35.46

Weight (kDa)

7.58

Isoelectric Point (pI)

44.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FTCD_N PF07837 32 - 221 4.7e-53 Formiminotransferase domain, N-terminal subdomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 681
Acc16I TGCGCA 1 cut(s) 786
AccB7I CCANNNNNTGG 1 cut(s) 775
AciI CCGC 1 cut(s) 437
AclWI GGATC 1 cut(s) 375
AcsI RAATTY 1 cut(s) 723
AcuI CTGAAG 2 cut(s) 620, 747
AfaI GTAC 1 cut(s) 107
AfeI AGCGCT 1 cut(s) 29
AfiI CCNNNNNNNGG 6 cut(s) 295, 356, 392, 611, 670, 775
AflIII ACRYGT 1 cut(s) 733
AgsI TTSAA 7 cut(s) 197, 314, 461, 516, 541, 863, 944
AhdI GACNNNNNGTC 1 cut(s) 328
AjuI GAANNNNNNNTTGG 2 cut(s) 552, 584
AloI GAACNNNNNNTCC 2 cut(s) 837, 869
AluBI AGCT 6 cut(s) 155, 241, 485, 529, 812, 859
AluI AGCT 6 cut(s) 155, 241, 485, 529, 812, 859
Alw21I GWGCWC 1 cut(s) 531
Alw26I GTCTC 1 cut(s) 238
AlwI GGATC 1 cut(s) 375
AlwNI CAGNNNCTG 1 cut(s) 965
Aor51HI AGCGCT 1 cut(s) 29
AoxI GGCC 1 cut(s) 777
ApeKI GCWGC 6 cut(s) 55, 96, 155, 305, 485, 710
ApoI RAATTY 1 cut(s) 723
AseI ATTAAT 1 cut(s) 938
AspLEI GCGC 2 cut(s) 30, 787
AspS9I GGNCC 3 cut(s) 575, 614, 778
AsuC2I CCSGG 2 cut(s) 352, 664
AsuHPI GGTGA 2 cut(s) 374, 803
AsuII TTCGAA 1 cut(s) 728
AvaII GGWCC 2 cut(s) 575, 614
BaeGI GKGCMC 1 cut(s) 508
BanII GRGCYC 1 cut(s) 531
BbsI GAAGAC 1 cut(s) 449
Bbv12I GWGCWC 1 cut(s) 531
BbvI GCAGC 6 cut(s) 67, 83, 142, 292, 472, 697
BccI CCATC 3 cut(s) 262, 274, 406
BcnI CCSGG 2 cut(s) 352, 664
BcoDI GTCTC 1 cut(s) 238
BfaI CTAG 2 cut(s) 453, 552
BfoI RGCGCY 1 cut(s) 31
BisI GCNGC 7 cut(s) 56, 97, 156, 306, 438, 486, 711
BlpI GCTNAGC 1 cut(s) 159
BlsI GCNGC 7 cut(s) 57, 98, 157, 307, 439, 487, 712
Bme1390I CCNGG 2 cut(s) 352, 664
Bme18I GGWCC 2 cut(s) 575, 614
BmeRI GACNNNNNGTC 1 cut(s) 328
BmgT120I GGNCC 3 cut(s) 575, 614, 778
BmiI GGNNCC 4 cut(s) 263, 576, 616, 828
BmrFI CCNGG 2 cut(s) 352, 664
BpiI GAAGAC 1 cut(s) 449
BpmI CTGGAG 1 cut(s) 158
Bpu10I CCTNAGC 1 cut(s) 433
Bpu1102I GCTNAGC 1 cut(s) 159
Bpu14I TTCGAA 1 cut(s) 728
BpuEI CTTGAG 4 cut(s) 295, 347, 615, 912
BpuMI CCSGG 2 cut(s) 352, 664
BsaJI CCNNGG 2 cut(s) 294, 350
BsaXI ACNNNNNCTCC 2 cut(s) 837, 867
Bsc4I CCNNNNNNNGG 6 cut(s) 295, 356, 392, 611, 670, 775
Bse1I ACTGG 1 cut(s) 141
Bse3DI GCAATG 1 cut(s) 780
BseDI CCNNGG 2 cut(s) 294, 350
BseGI GGATG 2 cut(s) 285, 346
BseLI CCNNNNNNNGG 6 cut(s) 295, 356, 392, 611, 670, 775
BseMI GCAATG 1 cut(s) 780
BseNI ACTGG 1 cut(s) 141
BseRI GAGGAG 4 cut(s) 78, 514, 762, 858
BseSI GKGCMC 1 cut(s) 508
BseXI GCAGC 6 cut(s) 67, 83, 142, 292, 472, 697
BshFI GGCC 1 cut(s) 779
BsiHKAI GWGCWC 1 cut(s) 531
BsiSI CCGG 2 cut(s) 352, 664
BslFI GGGAC 3 cut(s) 255, 600, 671
BslI CCNNNNNNNGG 6 cut(s) 295, 356, 392, 611, 670, 775
BsmAI GTCTC 1 cut(s) 238
BsmFI GGGAC 3 cut(s) 255, 600, 671
BsnI GGCC 1 cut(s) 779
Bsp119I TTCGAA 1 cut(s) 728
Bsp1286I GDGCHC 2 cut(s) 508, 531
Bsp1407I TGTACA 1 cut(s) 105
Bsp143I GATC 2 cut(s) 367, 919
Bsp1720I GCTNAGC 1 cut(s) 159
Bsp19I CCATGG 1 cut(s) 294
BspACI CCGC 1 cut(s) 437
BspANI GGCC 1 cut(s) 779
BspLI GGNNCC 4 cut(s) 263, 576, 616, 828
BspPI GGATC 1 cut(s) 375
BspT104I TTCGAA 1 cut(s) 728
BsrDI GCAATG 1 cut(s) 780
BsrGI TGTACA 1 cut(s) 105
BsrI ACTGG 1 cut(s) 141
BssECI CCNNGG 2 cut(s) 294, 350
BssMI GATC 2 cut(s) 367, 919
BssT1I CCWWGG 1 cut(s) 294
Bst4CI ACNGT 3 cut(s) 338, 564, 898
Bst6I CTCTTC 2 cut(s) 489, 517
BstAUI TGTACA 1 cut(s) 105
BstBI TTCGAA 1 cut(s) 728
BstC8I GCNNGC 5 cut(s) 132, 153, 243, 814, 876
BstDEI CTNAG 3 cut(s) 159, 237, 433
BstDSI CCRYGG 1 cut(s) 294
BstF5I GGATG 2 cut(s) 285, 346
BstH2I RGCGCY 1 cut(s) 31
BstHHI GCGC 2 cut(s) 30, 787
BstKTI GATC 2 cut(s) 370, 922
BstMAI GTCTC 1 cut(s) 238
BstMBI GATC 2 cut(s) 367, 919
BstMWI GCNNNNNNNGC 2 cut(s) 290, 422
BstSCI CCNGG 2 cut(s) 350, 662
BstSLI GKGCMC 1 cut(s) 508
BstV1I GCAGC 6 cut(s) 67, 83, 142, 292, 472, 697
BstV2I GAAGAC 1 cut(s) 449
BsuRI GGCC 1 cut(s) 779
BtgI CCRYGG 1 cut(s) 294
BtsCI GGATG 2 cut(s) 285, 346
BtsIMutI CAGTG 6 cut(s) 134, 334, 569, 596, 903, 915
Cac8I GCNNGC 5 cut(s) 132, 153, 243, 814, 876
CaiI CAGNNNCTG 1 cut(s) 965
CfoI GCGC 2 cut(s) 30, 787
Cfr13I GGNCC 3 cut(s) 575, 614, 778
Csp6I GTAC 1 cut(s) 106
CviAII CATG 3 cut(s) 295, 491, 788
CviQI GTAC 1 cut(s) 106
DdeI CTNAG 3 cut(s) 159, 237, 433
DpnI GATC 2 cut(s) 369, 921
DpnII GATC 2 cut(s) 367, 919
DriI GACNNNNNGTC 1 cut(s) 328
Eam1104I CTCTTC 2 cut(s) 489, 517
Eam1105I GACNNNNNGTC 1 cut(s) 328
EarI CTCTTC 2 cut(s) 489, 517
Ecl136II GAGCTC 1 cut(s) 529
Eco130I CCWWGG 1 cut(s) 294
Eco24I GRGCYC 1 cut(s) 531
Eco47I GGWCC 2 cut(s) 575, 614
Eco47III AGCGCT 1 cut(s) 29
Eco53kI GAGCTC 1 cut(s) 529
Eco57I CTGAAG 2 cut(s) 620, 747
EcoICRI GAGCTC 1 cut(s) 529
EcoO109I RGGNCCY 1 cut(s) 614
EcoT14I CCWWGG 1 cut(s) 294
EcoT38I GRGCYC 1 cut(s) 531
ErhI CCWWGG 1 cut(s) 294
FaeI CATG 3 cut(s) 298, 494, 791
FalI AAGNNNNNCTT 2 cut(s) 896, 928
FaqI GGGAC 3 cut(s) 255, 600, 671
FatI CATG 3 cut(s) 294, 490, 787
Fnu4HI GCNGC 7 cut(s) 56, 97, 156, 306, 438, 486, 711
FokI GGATG 2 cut(s) 292, 333
FriOI GRGCYC 1 cut(s) 531
Fsp4HI GCNGC 7 cut(s) 56, 97, 156, 306, 438, 486, 711
FspBI CTAG 2 cut(s) 453, 552
FspI TGCGCA 1 cut(s) 786
GlaI GCGC 2 cut(s) 29, 786
GluI GCNGC 7 cut(s) 56, 97, 156, 306, 438, 486, 711
GsuI CTGGAG 1 cut(s) 158
HaeII RGCGCY 1 cut(s) 31
HaeIII GGCC 1 cut(s) 779
HapII CCGG 2 cut(s) 352, 664
HhaI GCGC 2 cut(s) 30, 787
Hin1II CATG 3 cut(s) 298, 494, 791
Hin6I GCGC 2 cut(s) 28, 785
HinP1I GCGC 2 cut(s) 28, 785
HinfI GANTC 7 cut(s) 140, 165, 329, 428, 512, 628, 794
HpaII CCGG 2 cut(s) 352, 664
HphI GGTGA 2 cut(s) 374, 803
Hpy166II GTNNAC 3 cut(s) 106, 694, 755
Hpy188I TCNGA 3 cut(s) 115, 172, 586
Hpy188III TCNNGA 2 cut(s) 632, 929
Hpy8I GTNNAC 3 cut(s) 106, 694, 755
HpyAV CCTTC 4 cut(s) 398, 771, 881, 898
HpyCH4III ACNGT 3 cut(s) 338, 564, 898
HpyCH4IV ACGT 1 cut(s) 733
HpyCH4V TGCA 6 cut(s) 99, 134, 425, 816, 878, 955
HpyF10VI GCNNNNNNNGC 2 cut(s) 290, 422
HpyF3I CTNAG 3 cut(s) 159, 237, 433
HpySE526I ACGT 1 cut(s) 733
Hsp92II CATG 3 cut(s) 298, 494, 791
HspAI GCGC 2 cut(s) 28, 785
Kzo9I GATC 2 cut(s) 367, 919
LmnI GCTCC 2 cut(s) 482, 656
LpnPI CCDG 9 cut(s) 122, 227, 243, 365, 402, 618, 677, 702, 818
Lsp1109I GCAGC 6 cut(s) 67, 83, 142, 292, 472, 697
MaeI CTAG 2 cut(s) 453, 552
MaeII ACGT 1 cut(s) 733
MaeIII GTNAC 3 cut(s) 533, 625, 799
MalI GATC 2 cut(s) 369, 921
MboI GATC 2 cut(s) 367, 919
MboII GAAGA 5 cut(s) 209, 449, 506, 534, 896
MfeI CAATTG 1 cut(s) 144
MhlI GDGCHC 2 cut(s) 508, 531
MluCI AATT 7 cut(s) 144, 516, 676, 723, 817, 935, 939
MlyI GAGTC 4 cut(s) 149, 338, 422, 622
MmeI TCCRAC 2 cut(s) 384, 804
MnlI CCTC 9 cut(s) 56, 270, 492, 495, 740, 743, 799, 836, 864
MseI TTAA 3 cut(s) 77, 300, 938
MspI CCGG 2 cut(s) 352, 664
MspR9I CCNGG 2 cut(s) 352, 664
MunI CAATTG 1 cut(s) 144
MwoI GCNNNNNNNGC 2 cut(s) 290, 422
NciI CCSGG 2 cut(s) 352, 664
NcoI CCATGG 1 cut(s) 294
NdeII GATC 2 cut(s) 367, 919
NlaIII CATG 3 cut(s) 298, 494, 791
NlaIV GGNNCC 4 cut(s) 263, 576, 616, 828
NmuCI GTSAC 2 cut(s) 625, 799
NsbI TGCGCA 1 cut(s) 786
NspV TTCGAA 1 cut(s) 728
PfeI GAWTC 3 cut(s) 165, 512, 794
PflMI CCANNNNNTGG 1 cut(s) 775
PkrI GCNGC 7 cut(s) 57, 98, 157, 307, 439, 487, 712
PleI GAGTC 4 cut(s) 148, 337, 422, 622
PpsI GAGTC 4 cut(s) 148, 337, 422, 622
PpuMI RGGWCCY 1 cut(s) 614
PshBI ATTAAT 1 cut(s) 938
PsiI TTATAA 1 cut(s) 681
Psp124BI GAGCTC 1 cut(s) 531
Psp5II RGGWCCY 1 cut(s) 614
PspN4I GGNNCC 4 cut(s) 263, 576, 616, 828
PspPI GGNCC 3 cut(s) 575, 614, 778
PspPPI RGGWCCY 1 cut(s) 614
PstNI CAGNNNCTG 1 cut(s) 965
RsaI GTAC 1 cut(s) 107
RsaNI GTAC 1 cut(s) 106
SacI GAGCTC 1 cut(s) 531
SaqAI TTAA 3 cut(s) 77, 300, 938
SatI GCNGC 7 cut(s) 56, 97, 156, 306, 438, 486, 711
Sau3AI GATC 2 cut(s) 367, 919
Sau96I GGNCC 3 cut(s) 575, 614, 778
SchI GAGTC 4 cut(s) 149, 338, 422, 622
ScrFI CCNGG 2 cut(s) 352, 664
SduI GDGCHC 2 cut(s) 508, 531
SfuI TTCGAA 1 cut(s) 728
SinI GGWCC 2 cut(s) 575, 614
SmlI CTYRAG 4 cut(s) 274, 326, 630, 927
SmoI CTYRAG 4 cut(s) 274, 326, 630, 927
Sse9I AATT 7 cut(s) 144, 516, 676, 723, 817, 935, 939
SsiI CCGC 1 cut(s) 437
SspMI CTAG 2 cut(s) 453, 552
SstI GAGCTC 1 cut(s) 531
StyD4I CCNGG 2 cut(s) 350, 662
StyI CCWWGG 1 cut(s) 294
TaaI ACNGT 3 cut(s) 338, 564, 898
TaiI ACGT 1 cut(s) 736
TaqI TCGA 2 cut(s) 37, 728
TasI AATT 7 cut(s) 144, 516, 676, 723, 817, 935, 939
TatI WGTACW 1 cut(s) 105
TauI GCSGC 1 cut(s) 440
TfiI GAWTC 3 cut(s) 165, 512, 794
Tru1I TTAA 3 cut(s) 77, 300, 938
Tru9I TTAA 3 cut(s) 77, 300, 938
TscAI CASTG 6 cut(s) 141, 341, 569, 603, 903, 922
TseFI GTSAC 2 cut(s) 625, 799
TseI GCWGC 6 cut(s) 55, 96, 155, 305, 485, 710
Tsp45I GTSAC 2 cut(s) 625, 799
TspDTI ATGAA 3 cut(s) 29, 216, 507
TspRI CASTG 6 cut(s) 141, 341, 569, 603, 903, 922
Van91I CCANNNNNTGG 1 cut(s) 775
VpaK11BI GGWCC 2 cut(s) 575, 614
VspI ATTAAT 1 cut(s) 938
XapI RAATTY 1 cut(s) 723
XspI CTAG 2 cut(s) 453, 552
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.