Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0001831

Physical Location & Seq

Genomic Coordinates Forward (+)

74107279 .. 74113177

Gene Structure 5899 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021319

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2445 bp

ATGGACGACATATTCGGAGAGTCTCTGAACTTGGAAGAGATCCACATCAAGCAAGGCTTCGACGAAGGCCACAAAGACGGCCTGATCGCCGGAAAAGAGGAGGCCAGGCAAGTGGGCCTCAAGGTAGGCTTCGAGGTCGGCGAGGAGCTCGGGTTCTACAAGGGCTGCGTGGAGGTATGGAACTCTGCGATCCGGGTGGACCCGACCCGGTTCTCGACCCGAGTCCAAAAGGGCGTGAAGCAGATGGAGGAGTTGGTGGAGAGGTACCCGGTAATGGAACCCGAGAATGAGAGCGTGCAGGAGATAATGGAGGATTTGAGGTTGAAATTTAAGGCGGTTTGTGCTTCTTTGGGTGTGAAATTGGAGTACAAAGGGTACCCGAGAGCTTCTTCTTCTGGGGCTAAAGACAACGCTGTTTTCGATATGGTACAATCCATTGATTGGTTGGGTGTGTGCAGATACCAGCCACTAGAAGCTTGTAATGAGCAGCAAGGAGGAGAGAAAATGTTAAAATCAATTCTTGGTTGCTGCAAGGTGTACATATCTGAAAGCAGAAATAGGCTTGCATTGGAGTCAATTGAGCGAGCTGCTAAGCGATTCTCGGAAGCACCCATTGTCAATAAGTTTGAAGATGAAACTTACAACAGAGTTGGCTACACTCTTGTCTCTAAGCTGGCTCCAAAGCCATCTGGGGACCCTTGTCCCTTGAGGATGGCTGTCCTTGCCATGGTCAAGGCTGCTTTTGAAACCATTGACCTTGACTCGCACTGTGGAAGTCATCCCCGGCTTGGAGTTGTGGATCATATATGCTTTCACCCCCTTCTTGGCGCTTCGTTGGAACAGATGGCTGGTGTTGCAAACTCCTTAGCGGCAGATGTTGGCTCTAGTCTTCAAGTTCCTACATTTCTATATGGAGCTGCCCATGAAGAGAGGAGGACACTTGATTCAATTAGAAGAGAGCTCGGTTACTTCAAGCCAAACTCTAGTGGAGAACAGTGGGTTGGGGGTCCAAAATCGGAATACTTGGCACTGAAGCCAGACAAAGGTCCCCCTAAAGTGACTCAAGAGAAAGGTGTCATTGTGATTGGAGCAACCCTGTGGGTGGATAATTATAATGTACCTGTCCACTCTACTGATATTGCTGCTGTTCGTAGAATTTCGAAACGTGTGAGTGGCAGAGGAGGTGGACTTCCTTCAGTCCAAGCTATGGCCCTTGCGCATGGTGAATCTGTCACGGAGGTAGCTTGCAATTTGTTGGAACCACAGGAAGTGGGAGGAGATGGGGTTCAGCTTGAAGTTGAGAGGCTTGCAAAGGAAGAGGGTTTGACAGTGGGGAAGGGCTACTTCACTGATCTTTCTCAAGAAAAATTAATCGAAAGGAAGAAAGTCCTCATAAAGAAGAAGGATATAGATAGTGCCTTGCATATGAGTTCCCCAGAATTAAACAACCAACTTTTAGTAGCGAAGATTCAACCTTGGAGAGAAGAAATGGATTACAACGCTGCTTGCAAGGACAAGAAGAAGAAAACCATAGACCAGTCGATGCTGCTGTGCTGCAAGCTCTTCATATCTGAATCGCGTAACCTCGCTGTGCTCGACGCCATTGAACATGCCGCTAGGCTTGACCCGGAGTCTGTCATTGTTAACAAATTTGAGGACCGAGCTTACAATAGGGTCCGGTATACTATTGTGTCATATGTTCTGCATGATAGCACAGGAAGTGCTATATACAGCCCCTTGCAGCAAACTGTAGTAGCCATGGCTGAGGCAGCATTCGGGGCCATTAACCTCGAGCAGCACTCAGGGGCTCACCCTCGCCTAGGGGTTGTCGATGACATTGTGTTCCACCCTTTGGCAAGAGCATCTCTAGATGAAGCAGCTTGGCTTGCTAAGGCTGTGGCAGTGGACATTGGCAATAAATTCCAAGTTCCAGTATATCTATATGCTGCAGCACACCCTACGGGCAAGGCTCTTGACACCATTAGGCGTGAGCTTGGCTACTACAGGCCAAATTTCATGGGCAACCAATGGGCAGGATGGACCATGCCCGGAGTGCTCCAAGAAAAACCCGATGAAGGCCCGACAACTGTATCTCCTACTCGTGGCATTGCAATGATCGGGGCACGCCCATGGGTTGCCTTGTACAACATACCAATATTGTCCACCGATGTTGCAGCCACTCGAAGGATTGCAAGAATGGTGAGCGCTCGAGGGGGAGGTCTCCCAACTGTGCAAACACTGGGTCTGGTTCATGGTGAGGACTCCACAGAGATAGCTTGTATGCTCTTAGAGCCCAACCAGATTGGAGCAGACAGAGTCCAGAACCGGGTTGAGATGCTAGCAGCAGAAGAAGGGTTGTACGTAGAGAAGGGTTACTTCACTGATCACTCACCAGATATGGTAATTGAAAAGTACATGAAACTAATATCTGCAGAGAGAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FTCD_N Yae1_N

Protein Analysis

815

Amino Acids

89.74

Weight (kDa)

5.82

Isoelectric Point (pI)

40.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Yae1_N	PF09811	19 - 57	2e-07	Essential protein Yae1, N terminal
FTCD_N	PF07837	176 - 365	4.9e-53	Formiminotransferase domain, N-terminal subdomain
FTCD_N	PF07837	516 - 709	7e-51	Formiminotransferase domain, N-terminal subdomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001831)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20830 AT2G20830 AT2G20830 AT2G20830 AT2G20830 AT2G20830
fragaria_vesca	FvH4_6g44860 FvH4_6g44860 FvH4_6g44870 FvH4_6g44870 FvH4_6g44870
malus_domestica	MD09G1092400.v1.1 MD09G1092500.v1.1 MD17G1082500.v1.1
prunus_persica	Prupe.3G232600_v2.0.a1 Prupe.3G232600_v2.0.a1 Prupe.3G232600_v2.0.a1 Prupe.3G232600_v2.0.a1 Prupe.3G232600_v2.0.a1 Prupe.3G232600_v2.0.a1 Prupe.3G232600_v2.0.a1 Prupe.3G232700_v2.0.a1 Prupe.3G232700_v2.0.a1
pyrus_communis	pycom09g01780 pycom09g01790 pycom17g08050 pycom17g08060
rosa_chinensis	RchiOBHm_Chr2g0162051 RchiOBHm_Chr2g0162061
rosa_laevigata	RLG00000021319
rosa_multiflora	Rmu_co8364399.1_g000001 Rmu_sc0005601.1_g000004 Rmu_sc0005601.1_g000005 Rmu_sc0026966.1_g000002
rosa_roxburghii	Rroxscaffold_2G00088340 Rroxscaffold_2G00088350
rosa_rugosa	Rorug02G0494300
rosa_samantha	Rh2AG560400 Rh2AG560500 Rh2BG573700 Rh2BG573800 Rh2CG544000 Rh2CG544100 Rh2DG583700 Rh2DG583800
rosa_wichuraiana	Rw2G046410 Rw2G046420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1113
Acc16I	TGCGCA	1 cut(s)	1218
Acc65I	GGTACC	2 cut(s)	264, 375
AccB1I	GGYRCC	2 cut(s)	264, 375
AccB7I	CCANNNNNTGG	3 cut(s)	441, 1207, 1852
AccI	GTMKAC	1 cut(s)	1682
AccII	CGCG	1 cut(s)	1579
AciI	CCGC	3 cut(s)	335, 869, 1614
AclWI	GGATC	3 cut(s)	34, 184, 807
AcsI	RAATTY	5 cut(s)	326, 1155, 1649, 1919, 2011
AcuI	CTGAAG	2 cut(s)	1052, 1179
AcyI	GRCGYC	1 cut(s)	1599
AfaI	GTAC	9 cut(s)	266, 368, 377, 429, 539, 1119, 2144, 2360, 2414
AfeI	AGCGCT	1 cut(s)	2206
AflIII	ACRYGT	1 cut(s)	1165
AhdI	GACNNNNNGTC	1 cut(s)	1630
AjnI	CCWGG	1 cut(s)	104
AjuI	GAANNNNNNNTTGG	2 cut(s)	984, 1016
AloI	GAACNNNNNNTCC	4 cut(s)	137, 169, 1269, 1301
Alw21I	GWGCWC	4 cut(s)	150, 963, 1596, 2058
Alw26I	GTCTC	3 cut(s)	27, 670, 2225
AlwI	GGATC	3 cut(s)	34, 184, 807
Ama87I	CYCGRG	6 cut(s)	149, 219, 281, 379, 1790, 2208
Aor51HI	AGCGCT	1 cut(s)	2206
AoxI	GGCC	8 cut(s)	67, 79, 102, 115, 1209, 1779, 2006, 2077
ApoI	RAATTY	5 cut(s)	326, 1155, 1649, 1919, 2011
ArsI	GACNNNNNNTTYG	3 cut(s)	28, 2227, 2259
AseI	ATTAAT	1 cut(s)	1370
Asp718I	GGTACC	2 cut(s)	264, 375
AspA2I	CCTAGG	1 cut(s)	1819
AspLEI	GCGC	3 cut(s)	830, 1219, 2207
AsuC2I	CCSGG	7 cut(s)	194, 208, 269, 784, 1628, 2049, 2327
AsuHPI	GGTGA	6 cut(s)	806, 1235, 1802, 2212, 2267, 2382
AsuII	TTCGAA	1 cut(s)	1160
AsuNHI	GCTAGC	1 cut(s)	2338
AvaI	CYCGRG	6 cut(s)	149, 219, 281, 379, 1790, 2208
AvaII	GGWCC	7 cut(s)	199, 694, 1007, 1046, 1657, 1675, 2040
AvrII	CCTAGG	1 cut(s)	1819
BaeGI	GKGCMC	1 cut(s)	2125
BaeI	ACNNNNGTAYC	2 cut(s)	2073, 2106
BanI	GGYRCC	2 cut(s)	264, 375
BanII	GRGCYC	4 cut(s)	150, 963, 1810, 2295
BauI	CACGAG	1 cut(s)	2100
BbsI	GAAGAC	1 cut(s)	881
Bbv12I	GWGCWC	4 cut(s)	150, 963, 1596, 2058
BbvCI	CCTCAGC	1 cut(s)	1764
BccI	CCATC	6 cut(s)	238, 694, 706, 838, 1274, 2031
BceAI	ACGGC	1 cut(s)	94
BciT130I	CCWGG	1 cut(s)	106
BclI	TGATCA	1 cut(s)	2383
BcnI	CCSGG	7 cut(s)	194, 208, 269, 784, 1628, 2049, 2327
BcoDI	GTCTC	3 cut(s)	27, 670, 2225
BfaI	CTAG	8 cut(s)	470, 885, 984, 1617, 1820, 1868, 2339, 2443
BfmI	CTRYAG	4 cut(s)	1749, 1947, 2002, 2430
BfoI	RGCGCY	2 cut(s)	831, 2208
BlnI	CCTAGG	1 cut(s)	1819
BlpI	GCTNAGC	1 cut(s)	591
Bme1390I	CCNGG	8 cut(s)	106, 194, 208, 269, 784, 1628, 2049, 2327
Bme18I	GGWCC	7 cut(s)	199, 694, 1007, 1046, 1657, 1675, 2040
BmeRI	GACNNNNNGTC	1 cut(s)	1630
BmeT110I	CYCGRG	6 cut(s)	149, 219, 281, 379, 1790, 2208
BmrFI	CCNGG	8 cut(s)	106, 194, 208, 269, 784, 1628, 2049, 2327
BmrI	ACTGGG	1 cut(s)	2249
BmsI	GCATC	3 cut(s)	1533, 1871, 2325
BmtI	GCTAGC	1 cut(s)	2342
BmuI	ACTGGG	1 cut(s)	2249
BoxI	GACNNNNGTC	3 cut(s)	221, 699, 1044
BpiI	GAAGAC	1 cut(s)	881
BplI	GAGNNNNNCTC	2 cut(s)	1784, 1816
Bpu10I	CCTNAGC	3 cut(s)	865, 1764, 1890
Bpu1102I	GCTNAGC	1 cut(s)	591
Bpu14I	TTCGAA	1 cut(s)	1160
BpuEI	CTTGAG	4 cut(s)	104, 727, 1047, 1344
BpuMI	CCSGG	7 cut(s)	194, 208, 269, 784, 1628, 2049, 2327
BsaAI	YACGTR	1 cut(s)	2362
BsaBI	GATNNNNATC	1 cut(s)	44
BsaHI	GRCGYC	1 cut(s)	1599
BsaI	GGTCTC	1 cut(s)	2225
BsaJI	CCNNGG	6 cut(s)	726, 782, 1475, 1758, 1819, 2129
BsaWI	WCCGGW	1 cut(s)	1677
BsaXI	ACNNNNNCTCC	6 cut(s)	137, 167, 1269, 1299, 2077, 2107
Bse1I	ACTGG	3 cut(s)	1537, 1931, 2244
Bse3DI	GCAATG	2 cut(s)	2106, 2118
Bse8I	GATNNNNATC	1 cut(s)	44
BseBI	CCWGG	1 cut(s)	106
BseDI	CCNNGG	6 cut(s)	726, 782, 1475, 1758, 1819, 2129
BseGI	GGATG	3 cut(s)	717, 778, 2042
BseJI	GATNNNNATC	1 cut(s)	44
BseMI	GCAATG	2 cut(s)	2106, 2118
BseMII	CTCAG	2 cut(s)	1755, 1815
BseNI	ACTGG	3 cut(s)	1537, 1931, 2244
BseRI	GAGGAG	7 cut(s)	113, 158, 263, 510, 946, 1194, 1290
BseSI	GKGCMC	1 cut(s)	2125
BsgI	GTGCAG	2 cut(s)	317, 475
Bsh1236I	CGCG	1 cut(s)	1579
BshFI	GGCC	8 cut(s)	69, 81, 104, 117, 1211, 1781, 2008, 2079
BshNI	GGYRCC	2 cut(s)	264, 375
BsiHKAI	GWGCWC	4 cut(s)	150, 963, 1596, 2058
BsiHKCI	CYCGRG	6 cut(s)	149, 219, 281, 379, 1790, 2208
BsiSI	CCGG	9 cut(s)	90, 193, 208, 269, 784, 1628, 1678, 2049, 2326
BslFI	GGGAC	3 cut(s)	687, 707, 1032
BsmAI	GTCTC	3 cut(s)	27, 670, 2225
BsmFI	GGGAC	3 cut(s)	687, 707, 1032
BsmI	GAATGC	1 cut(s)	1772
BsnI	GGCC	8 cut(s)	69, 81, 104, 117, 1211, 1781, 2008, 2079
Bso31I	GGTCTC	1 cut(s)	2225
BsoBI	CYCGRG	6 cut(s)	149, 219, 281, 379, 1790, 2208
Bsp119I	TTCGAA	1 cut(s)	1160
Bsp1286I	GDGCHC	7 cut(s)	150, 963, 1596, 1810, 2058, 2125, 2295
Bsp1407I	TGTACA	2 cut(s)	537, 2142
Bsp143I	GATC	7 cut(s)	39, 84, 189, 799, 1351, 2115, 2383
Bsp1720I	GCTNAGC	1 cut(s)	591
Bsp19I	CCATGG	3 cut(s)	726, 1758, 2129
BspACI	CCGC	3 cut(s)	335, 869, 1614
BspANI	GGCC	8 cut(s)	69, 81, 104, 117, 1211, 1781, 2008, 2079
BspCNI	CTCAG	2 cut(s)	1756, 1814
BspFNI	CGCG	1 cut(s)	1579
BspMAI	CTGCAG	2 cut(s)	1951, 2434
BspOI	GCTAGC	1 cut(s)	2342
BspPI	GGATC	3 cut(s)	34, 184, 807
BspQI	GCTCTTC	1 cut(s)	1568
BspT104I	TTCGAA	1 cut(s)	1160
BspT107I	GGYRCC	2 cut(s)	264, 375
BspTNI	GGTCTC	1 cut(s)	2225
BsrDI	GCAATG	2 cut(s)	2106, 2118
BsrGI	TGTACA	2 cut(s)	537, 2142
BsrI	ACTGG	3 cut(s)	1537, 1931, 2244
BssECI	CCNNGG	6 cut(s)	726, 782, 1475, 1758, 1819, 2129
BssMI	GATC	7 cut(s)	39, 84, 189, 799, 1351, 2115, 2383
BssNAI	GTATAC	1 cut(s)	1683
BssNI	GRCGYC	1 cut(s)	1599
BssSI	CACGAG	1 cut(s)	2100
BssT1I	CCWWGG	5 cut(s)	726, 1475, 1758, 1819, 2129
Bst1107I	GTATAC	1 cut(s)	1683
Bst2BI	CACGAG	1 cut(s)	2100
Bst2UI	CCWGG	1 cut(s)	106
Bst4CI	ACNGT	6 cut(s)	770, 996, 1330, 1750, 2089, 2230
Bst6I	CTCTTC	5 cut(s)	30, 921, 949, 1311, 1568
BstACI	GRCGYC	1 cut(s)	1599
BstAUI	TGTACA	2 cut(s)	537, 2142
BstBAI	YACGTR	1 cut(s)	2362
BstBI	TTCGAA	1 cut(s)	1160
BstDEI	CTNAG	7 cut(s)	591, 669, 865, 1764, 1801, 1890, 2287
BstDSI	CCRYGG	3 cut(s)	726, 1758, 2129
BstENI	CCTNNNNNAGG	1 cut(s)	1818
BstF5I	GGATG	3 cut(s)	717, 778, 2042
BstFNI	CGCG	1 cut(s)	1579
BstH2I	RGCGCY	2 cut(s)	831, 2208
BstHHI	GCGC	3 cut(s)	830, 1219, 2207
BstKTI	GATC	7 cut(s)	42, 87, 192, 802, 1354, 2118, 2386
BstMAI	GTCTC	3 cut(s)	27, 670, 2225
BstMBI	GATC	7 cut(s)	39, 84, 189, 799, 1351, 2115, 2383
BstMWI	GCNNNNNNNGC	8 cut(s)	341, 722, 854, 1769, 1778, 1886, 2053, 2290
BstNI	CCWGG	1 cut(s)	106
BstNSI	RCATGY	1 cut(s)	1613
BstPAI	GACNNNNGTC	3 cut(s)	221, 699, 1044
BstSCI	CCNGG	8 cut(s)	104, 192, 206, 267, 782, 1626, 2047, 2325
BstSFI	CTRYAG	4 cut(s)	1749, 1947, 2002, 2430
BstSLI	GKGCMC	1 cut(s)	2125
BstSNI	TACGTA	1 cut(s)	2362
BstUI	CGCG	1 cut(s)	1579
BstV2I	GAAGAC	1 cut(s)	881
BstX2I	RGATCY	1 cut(s)	39
BstXI	CCANNNNNNTGG	1 cut(s)	112
BstYI	RGATCY	1 cut(s)	39
BstZ17I	GTATAC	1 cut(s)	1683
BsuRI	GGCC	8 cut(s)	69, 81, 104, 117, 1211, 1781, 2008, 2079
BtgI	CCRYGG	3 cut(s)	726, 1758, 2129
BtsCI	GGATG	3 cut(s)	717, 778, 2042
BtsI	GCAGTG	1 cut(s)	1908
BtsIMutI	CAGTG	8 cut(s)	766, 1001, 1028, 1335, 1347, 1908, 2237, 2379
CfoI	GCGC	3 cut(s)	830, 1219, 2207
CseI	GACGC	1 cut(s)	1607
Csp6I	GTAC	9 cut(s)	265, 367, 376, 428, 538, 1118, 2143, 2359, 2413
CspCI	CAANNNNNGTGG	2 cut(s)	2152, 2187
CviQI	GTAC	9 cut(s)	265, 367, 376, 428, 538, 1118, 2143, 2359, 2413
DdeI	CTNAG	7 cut(s)	591, 669, 865, 1764, 1801, 1890, 2287
DpnI	GATC	7 cut(s)	41, 86, 191, 801, 1353, 2117, 2385
DpnII	GATC	7 cut(s)	39, 84, 189, 799, 1351, 2115, 2383
DriI	GACNNNNNGTC	1 cut(s)	1630
Eam1104I	CTCTTC	5 cut(s)	30, 921, 949, 1311, 1568
Eam1105I	GACNNNNNGTC	1 cut(s)	1630
EarI	CTCTTC	5 cut(s)	30, 921, 949, 1311, 1568
Ecl136II	GAGCTC	2 cut(s)	148, 961
Eco105I	TACGTA	1 cut(s)	2362
Eco130I	CCWWGG	5 cut(s)	726, 1475, 1758, 1819, 2129
Eco24I	GRGCYC	4 cut(s)	150, 963, 1810, 2295
Eco31I	GGTCTC	1 cut(s)	2225
Eco47I	GGWCC	7 cut(s)	199, 694, 1007, 1046, 1657, 1675, 2040
Eco47III	AGCGCT	1 cut(s)	2206
Eco53kI	GAGCTC	2 cut(s)	148, 961
Eco57I	CTGAAG	2 cut(s)	1052, 1179
Eco88I	CYCGRG	6 cut(s)	149, 219, 281, 379, 1790, 2208
EcoICRI	GAGCTC	2 cut(s)	148, 961
EcoNI	CCTNNNNNAGG	1 cut(s)	1818
EcoO109I	RGGNCCY	2 cut(s)	694, 1046
EcoRII	CCWGG	1 cut(s)	104
EcoT14I	CCWWGG	5 cut(s)	726, 1475, 1758, 1819, 2129
EcoT38I	GRGCYC	4 cut(s)	150, 963, 1810, 2295
ErhI	CCWWGG	5 cut(s)	726, 1475, 1758, 1819, 2129
FalI	AAGNNNNNCTT	8 cut(s)	41, 73, 113, 145, 1328, 1360, 2360, 2392
FaqI	GGGAC	3 cut(s)	687, 707, 1032
FauNDI	CATATG	2 cut(s)	1425, 1696
FbaI	TGATCA	1 cut(s)	2383
FblI	GTMKAC	1 cut(s)	1682
FokI	GGATG	3 cut(s)	724, 765, 2049
FriOI	GRGCYC	4 cut(s)	150, 963, 1810, 2295
FspBI	CTAG	8 cut(s)	470, 885, 984, 1617, 1820, 1868, 2339, 2443
FspI	TGCGCA	1 cut(s)	1218
GlaI	GCGC	3 cut(s)	829, 1218, 2206
HaeII	RGCGCY	2 cut(s)	831, 2208
HaeIII	GGCC	8 cut(s)	69, 81, 104, 117, 1211, 1781, 2008, 2079
HapII	CCGG	9 cut(s)	90, 193, 208, 269, 784, 1628, 1678, 2049, 2326
HgaI	GACGC	1 cut(s)	1607
HhaI	GCGC	3 cut(s)	830, 1219, 2207
Hin1I	GRCGYC	1 cut(s)	1599
Hin6I	GCGC	3 cut(s)	828, 1217, 2205
HinP1I	GCGC	3 cut(s)	828, 1217, 2205
HincII	GTYRAC	1 cut(s)	1645
HindII	GTYRAC	1 cut(s)	1645
HindIII	AAGCTT	1 cut(s)	474
HpaI	GTTAAC	1 cut(s)	1645
HpaII	CCGG	9 cut(s)	90, 193, 208, 269, 784, 1628, 1678, 2049, 2326
HphI	GGTGA	6 cut(s)	806, 1235, 1802, 2212, 2267, 2382
Hpy166II	GTNNAC	8 cut(s)	199, 538, 1126, 1187, 1645, 1683, 1906, 2163
Hpy188I	TCNGA	6 cut(s)	17, 27, 547, 604, 1018, 1573
Hpy188III	TCNNGA	6 cut(s)	214, 1064, 1361, 1868, 1973, 2320
Hpy8I	GTNNAC	8 cut(s)	199, 538, 1126, 1187, 1645, 1683, 1906, 2163
Hpy99I	CGWCG	2 cut(s)	65, 1601
HpyAV	CCTTC	9 cut(s)	59, 830, 1203, 1330, 1396, 2069, 2178, 2345, 2362
HpyCH4III	ACNGT	6 cut(s)	770, 996, 1330, 1750, 2089, 2230
HpyCH4IV	ACGT	2 cut(s)	1165, 2361
HpyF10VI	GCNNNNNNNGC	8 cut(s)	341, 722, 854, 1769, 1778, 1886, 2053, 2290
HpyF3I	CTNAG	7 cut(s)	591, 669, 865, 1764, 1801, 1890, 2287
HpySE526I	ACGT	2 cut(s)	1165, 2361
Hsp92I	GRCGYC	1 cut(s)	1599
HspAI	GCGC	3 cut(s)	828, 1217, 2205
KflI	GGGWCCC	1 cut(s)	694
KpnI	GGTACC	2 cut(s)	268, 379
Ksp22I	TGATCA	1 cut(s)	2383
KspAI	GTTAAC	1 cut(s)	1645
Kzo9I	GATC	7 cut(s)	39, 84, 189, 799, 1351, 2115, 2383
LguI	GCTCTTC	1 cut(s)	1568
LmnI	GCTCC	6 cut(s)	145, 682, 914, 1088, 2061, 2306
LweI	GCATC	3 cut(s)	1533, 1871, 2325
MaeI	CTAG	8 cut(s)	470, 885, 984, 1617, 1820, 1868, 2339, 2443
MaeII	ACGT	2 cut(s)	1165, 2361
MaeIII	GTNAC	5 cut(s)	965, 1057, 1231, 1580, 2372
MalI	GATC	7 cut(s)	41, 86, 191, 801, 1353, 2117, 2385
MboI	GATC	7 cut(s)	39, 84, 189, 799, 1351, 2115, 2383
MfeI	CAATTG	1 cut(s)	576
MflI	RGATCY	1 cut(s)	39
MhlI	GDGCHC	7 cut(s)	150, 963, 1596, 1810, 2058, 2125, 2295
MlyI	GAGTC	8 cut(s)	29, 231, 581, 755, 1054, 1640, 2255, 2325
MmeI	TCCRAC	2 cut(s)	816, 1236
MseI	TTAA	6 cut(s)	330, 509, 1370, 1442, 1644, 1785
MslI	CAYNNNNRTG	2 cut(s)	2111, 2128
MspI	CCGG	9 cut(s)	90, 193, 208, 269, 784, 1628, 1678, 2049, 2326
MspR9I	CCNGG	8 cut(s)	106, 194, 208, 269, 784, 1628, 2049, 2327
MunI	CAATTG	1 cut(s)	576
Mva1269I	GAATGC	1 cut(s)	1772
MvaI	CCWGG	1 cut(s)	106
MvnI	CGCG	1 cut(s)	1579
MwoI	GCNNNNNNNGC	8 cut(s)	341, 722, 854, 1769, 1778, 1886, 2053, 2290
NciI	CCSGG	7 cut(s)	194, 208, 269, 784, 1628, 2049, 2327
NcoI	CCATGG	3 cut(s)	726, 1758, 2129
NdeI	CATATG	2 cut(s)	1425, 1696
NdeII	GATC	7 cut(s)	39, 84, 189, 799, 1351, 2115, 2383
NheI	GCTAGC	1 cut(s)	2338
NmuCI	GTSAC	2 cut(s)	1057, 1231
NsbI	TGCGCA	1 cut(s)	1218
NspI	RCATGY	1 cut(s)	1613
NspV	TTCGAA	1 cut(s)	1160
PaeR7I	CTCGAG	2 cut(s)	1790, 2208
PciSI	GCTCTTC	1 cut(s)	1568
PcsI	WCGNNNNNNNCGW	3 cut(s)	138, 417, 1593
PctI	GAATGC	1 cut(s)	1772
PfeI	GAWTC	5 cut(s)	597, 944, 1226, 1468, 1574
PflFI	GACNNNGTC	1 cut(s)	2315
PflMI	CCANNNNNTGG	3 cut(s)	441, 1207, 1852
PleI	GAGTC	8 cut(s)	28, 230, 580, 755, 1054, 1639, 2255, 2324
PpsI	GAGTC	8 cut(s)	28, 230, 580, 755, 1054, 1639, 2255, 2324
Ppu21I	YACGTR	1 cut(s)	2362
PpuMI	RGGWCCY	2 cut(s)	694, 1046
PshAI	GACNNNNGTC	3 cut(s)	221, 699, 1044
PshBI	ATTAAT	1 cut(s)	1370
PsiI	TTATAA	1 cut(s)	1113
Psp124BI	GAGCTC	2 cut(s)	150, 963
Psp5II	RGGWCCY	2 cut(s)	694, 1046
Psp6I	CCWGG	1 cut(s)	104
PspGI	CCWGG	1 cut(s)	104
PspPPI	RGGWCCY	2 cut(s)	694, 1046
PspXI	VCTCGAGB	2 cut(s)	1790, 2208
PstI	CTGCAG	2 cut(s)	1951, 2434
PsuI	RGATCY	1 cut(s)	39
PsyI	GACNNNGTC	1 cut(s)	2315
RsaI	GTAC	9 cut(s)	266, 368, 377, 429, 539, 1119, 2144, 2360, 2414
RsaNI	GTAC	9 cut(s)	265, 367, 376, 428, 538, 1118, 2143, 2359, 2413
RseI	CAYNNNNRTG	2 cut(s)	2111, 2128
SacI	GAGCTC	2 cut(s)	150, 963
SapI	GCTCTTC	1 cut(s)	1568
SaqAI	TTAA	6 cut(s)	330, 509, 1370, 1442, 1644, 1785
Sau3AI	GATC	7 cut(s)	39, 84, 189, 799, 1351, 2115, 2383
SchI	GAGTC	8 cut(s)	29, 231, 581, 755, 1054, 1640, 2255, 2325
ScrFI	CCNGG	8 cut(s)	106, 194, 208, 269, 784, 1628, 2049, 2327
SduI	GDGCHC	7 cut(s)	150, 963, 1596, 1810, 2058, 2125, 2295
SfaNI	GCATC	3 cut(s)	1533, 1871, 2325
SfcI	CTRYAG	4 cut(s)	1749, 1947, 2002, 2430
Sfr274I	CTCGAG	2 cut(s)	1790, 2208
SfuI	TTCGAA	1 cut(s)	1160
SinI	GGWCC	7 cut(s)	199, 694, 1007, 1046, 1657, 1675, 2040
SlaI	CTCGAG	2 cut(s)	1790, 2208
SmiMI	CAYNNNNRTG	2 cut(s)	2111, 2128
SmlI	CTYRAG	6 cut(s)	119, 706, 1062, 1359, 1790, 2208
SmoI	CTYRAG	6 cut(s)	119, 706, 1062, 1359, 1790, 2208
SnaBI	TACGTA	1 cut(s)	2362
SsiI	CCGC	3 cut(s)	335, 869, 1614
SspI	AATATT	1 cut(s)	2157
SspMI	CTAG	8 cut(s)	470, 885, 984, 1617, 1820, 1868, 2339, 2443
SstI	GAGCTC	2 cut(s)	150, 963
StyD4I	CCNGG	8 cut(s)	104, 192, 206, 267, 782, 1626, 2047, 2325
StyI	CCWWGG	5 cut(s)	726, 1475, 1758, 1819, 2129
TaaI	ACNGT	6 cut(s)	770, 996, 1330, 1750, 2089, 2230
TaiI	ACGT	2 cut(s)	1168, 2364
TaqII	GACCGA	1 cut(s)	1674
TatI	WGTACW	4 cut(s)	366, 537, 2142, 2412
TauI	GCSGC	2 cut(s)	872, 1616
TfiI	GAWTC	5 cut(s)	597, 944, 1226, 1468, 1574
Tru1I	TTAA	6 cut(s)	330, 509, 1370, 1442, 1644, 1785
Tru9I	TTAA	6 cut(s)	330, 509, 1370, 1442, 1644, 1785
TscAI	CASTG	8 cut(s)	773, 1001, 1035, 1335, 1354, 1908, 2244, 2386
TseFI	GTSAC	2 cut(s)	1057, 1231
Tsp45I	GTSAC	2 cut(s)	1057, 1231
TspDTI	ATGAA	8 cut(s)	648, 939, 1555, 1887, 2005, 2088, 2240, 2432
TspGWI	ACGGA	1 cut(s)	1250
TspRI	CASTG	8 cut(s)	773, 1001, 1035, 1335, 1354, 1908, 2244, 2386
Tth111I	GACNNNGTC	1 cut(s)	2315
Van91I	CCANNNNNTGG	3 cut(s)	441, 1207, 1852
VpaK11BI	GGWCC	7 cut(s)	199, 694, 1007, 1046, 1657, 1675, 2040
VspI	ATTAAT	1 cut(s)	1370
XagI	CCTNNNNNAGG	1 cut(s)	1818
XapI	RAATTY	5 cut(s)	326, 1155, 1649, 1919, 2011
XbaI	TCTAGA	1 cut(s)	1867
XceI	RCATGY	1 cut(s)	1613
XcmI	CCANNNNNNNNNTGG	1 cut(s)	442
XhoI	CTCGAG	2 cut(s)	1790, 2208
XmaJI	CCTAGG	1 cut(s)	1819
XmiI	GTMKAC	1 cut(s)	1682
XspI	CTAG	8 cut(s)	470, 885, 984, 1617, 1820, 1868, 2339, 2443

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.