Prupe.3G260300_v2.0.a1

mitochondrial saccharopine dehydrogenase-like oxidoreductase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
24651902 .. 24654249
2348 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G260300.1

Sequence Viewer

Length: 1368 bp
ATGCCAGAACTTCAACCCAACACCCCCAGCCCTCCCTACGATCTGATAATCCTTGGAGCCTCAGGCTTCACAGGCAAGTACGTTGTCAAAGAAGCTTTGAAATTCCTCAACACACCCTCCTCCCCTCTCAAGTCTCTGGCTTTAGCTGGTCGCAGCCCCACAAAACTAACCCAGACCCTCAAATGGGCAGCTCACCCAAACCCACCACCGCCCATTCCCATCATCAACGCCGACACCACCGACCCACCATCGCTCCACCGCCTCTGCACCCAAACCAAACTTATCCTCAACTGCGTGGGGCCCTTTCGCCTCTACGGCGAGTCGGTGGTGGCCGCTTGCGCCGAAACTGGCTGCGATTACTTGGATATATGTGGAGAGCCTGAGTTCATGGAGAGGATGGAGGCTAAGTACCATGACCGGGCCGTGGAGGTCGGTTCTTTGGTGATTTCGGCATGTGGGTTTGACTCGGTTCCGGCTGAGTTTGGGTTGATGTTCAATTCGAGGCAGTGGGTCGATCCGGCTCTGCCGAACCGGGTCGAGGCTTATGTGAGCTTGGAGTCGGAGAAGAGGATTGTTGGGAATTTCGGGACGTTTGAATCGGCGGTGTTGAGTGTGGCTAATGCCGACAAGTTGCAGGAGCTCAGGCGGTCCAGACCCAGAAAACCAAGGCCTGCGATTCCTGGACCCCCTCCTCCTAAAGGACCAACTATAGAACAACAGAAAGATATTGGCCTTTGGGCTGTGAAGCTACCTTCAGCAGATGCTATTGTGGTACGTAGAACACTTGGAGTTCTGACTGAAAACCCTCGTGGTCTTCCTGGGAGCAATGAGAGTGCAGAACGCATTGAAAAAAGAGAAGCCTTCTGGTCAACAGTGAAGCCAGTTCATTTTGGGGTGAAGATAGGCTCTAAGTCTCTGTTGGGCATTTTGCATATCATGACCGTTGGAATCTTTATTGGGCTCTTGGGAAGATTTTCCTTTGGGAGATGGCTTCTCTTAAAGTTTCCCTCATTCTTCAGTGTTGGATGGTTTAGGAAGAAGGGTCCGTCTGAGGATGAGGTGAGAAGTGCTTCATTTAAGATGTGGTTTGTTGGAAAAGGTTTCAGCGACAGCAGTCTTGTTTCACAGGGAAACAGAAAACCTGATATGGAAATAATAACAAGAGTGATGGGTCCTGAGATTGGCTATTTGACCACTCCAATAATTCTATTGCAGTGTGCTCTTATTCTTCTGCACCAACGTAACAACCTTCCAAAGGGAGGAGTTTTCCCACCTGGGATTGTATTTGGCCCAACTGATCTCCAGGAAAGGCTCCAAGAGAATGGAATTTCTTTTGATGTCATTTCAAAGAAAGCTATTTCTAGTTAA

Protein Analysis

456

Amino Acids

49.93

Weight (kDa)

9.2

Isoelectric Point (pI)

48.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 209, 259, 333, 602, 646
AclWI GGATC 1 cut(s) 509
AcoI YGGCCR 1 cut(s) 330
AcsI RAATTY 3 cut(s) 101, 580, 1326
AcuI CTGAAG 2 cut(s) 738, 1000
AfaI GTAC 3 cut(s) 80, 410, 774
AfiI CCNNNNNNNGG 9 cut(s) 183, 184, 418, 424, 538, 698, 1181, 1255, 1259
AgsI TTSAA 6 cut(s) 14, 100, 496, 596, 848, 1347
AjnI CCWGG 4 cut(s) 679, 817, 1273, 1302
AluBI AGCT 7 cut(s) 95, 146, 191, 552, 640, 748, 1355
AluI AGCT 7 cut(s) 95, 146, 191, 552, 640, 748, 1355
Alw21I GWGCWC 2 cut(s) 642, 1222
Alw26I GTCTC 2 cut(s) 138, 918
AlwI GGATC 1 cut(s) 509
AoxI GGCC 6 cut(s) 299, 330, 420, 668, 730, 1288
ApaI GGGCCC 1 cut(s) 303
ApeKI GCWGC 3 cut(s) 153, 188, 351
ApoI RAATTY 3 cut(s) 101, 580, 1326
Asp700I GAANNNNTTC 2 cut(s) 973, 1069
AspLEI GCGC 1 cut(s) 341
AspS9I GGNCC 9 cut(s) 299, 300, 420, 648, 683, 701, 1043, 1172, 1289
AsuC2I CCSGG 2 cut(s) 419, 533
AsuHPI GGTGA 4 cut(s) 185, 454, 907, 1072
AvaII GGWCC 5 cut(s) 648, 683, 701, 1043, 1172
AxyI CCTNAGG 1 cut(s) 61
BaeGI GKGCMC 1 cut(s) 303
BanII GRGCYC 3 cut(s) 303, 642, 963
BauI CACGAG 1 cut(s) 807
BbsI GAAGAC 1 cut(s) 806
Bbv12I GWGCWC 2 cut(s) 642, 1222
BbvI GCAGC 3 cut(s) 165, 200, 338
BccI CCATC 6 cut(s) 227, 256, 391, 981, 1020, 1162
BceAI ACGGC 2 cut(s) 331, 407
BciT130I CCWGG 4 cut(s) 681, 819, 1275, 1304
BcnI CCSGG 2 cut(s) 419, 533
BcoDI GTCTC 2 cut(s) 138, 918
BfaI CTAG 1 cut(s) 1362
BfmI CTRYAG 1 cut(s) 708
BglI GCCNNNNNGGC 1 cut(s) 315
BisI GCNGC 4 cut(s) 154, 189, 333, 352
BlsI GCNGC 4 cut(s) 155, 190, 334, 353
Bme1390I CCNGG 6 cut(s) 419, 533, 681, 819, 1275, 1304
Bme18I GGWCC 5 cut(s) 648, 683, 701, 1043, 1172
BmgT120I GGNCC 9 cut(s) 299, 300, 420, 648, 683, 701, 1043, 1172, 1289
BmiI GGNNCC 8 cut(s) 58, 300, 301, 471, 685, 1044, 1173, 1313
BmrFI CCNGG 6 cut(s) 419, 533, 681, 819, 1275, 1304
BmsI GCATC 1 cut(s) 751
BoxI GACNNNNGTC 1 cut(s) 1113
BpiI GAAGAC 1 cut(s) 806
BpmI CTGGAG 1 cut(s) 1286
Bpu10I CCTNAGC 1 cut(s) 641
BpuEI CTTGAG 1 cut(s) 113
BpuMI CCSGG 2 cut(s) 419, 533
BsaAI YACGTR 1 cut(s) 776
BsaJI CCNNGG 5 cut(s) 52, 423, 665, 818, 1274
BsaXI ACNNNNNCTCC 6 cut(s) 101, 131, 237, 267, 392, 422
Bsc4I CCNNNNNNNGG 9 cut(s) 183, 184, 418, 424, 538, 698, 1181, 1255, 1259
Bse1I ACTGG 2 cut(s) 352, 881
Bse21I CCTNAGG 1 cut(s) 61
Bse3DI GCAATG 1 cut(s) 832
BseBI CCWGG 4 cut(s) 681, 819, 1275, 1304
BseDI CCNNGG 5 cut(s) 52, 423, 665, 818, 1274
BseGI GGATG 3 cut(s) 402, 1031, 1060
BseLI CCNNNNNNNGG 9 cut(s) 183, 184, 418, 424, 538, 698, 1181, 1255, 1259
BseMI GCAATG 1 cut(s) 832
BseMII CTCAG 6 cut(s) 75, 372, 468, 655, 1041, 1167
BseNI ACTGG 2 cut(s) 352, 881
BseRI GAGGAG 3 cut(s) 109, 681, 1275
BseSI GKGCMC 1 cut(s) 303
BseXI GCAGC 3 cut(s) 165, 200, 338
BseYI CCCAGC 1 cut(s) 26
BsgI GTGCAG 3 cut(s) 250, 855, 1217
BshFI GGCC 6 cut(s) 301, 332, 422, 670, 732, 1290
BsiHKAI GWGCWC 2 cut(s) 642, 1222
BsiSI CCGG 4 cut(s) 418, 473, 518, 532
BslFI GGGAC 1 cut(s) 601
BslI CCNNNNNNNGG 9 cut(s) 183, 184, 418, 424, 538, 698, 1181, 1255, 1259
BsmAI GTCTC 2 cut(s) 138, 918
BsmFI GGGAC 1 cut(s) 601
BsnI GGCC 6 cut(s) 301, 332, 422, 670, 732, 1290
Bsp120I GGGCCC 1 cut(s) 299
Bsp1286I GDGCHC 4 cut(s) 303, 642, 963, 1222
Bsp143I GATC 3 cut(s) 40, 514, 1297
BspACI CCGC 5 cut(s) 209, 259, 333, 602, 646
BspANI GGCC 6 cut(s) 301, 332, 422, 670, 732, 1290
BspCNI CTCAG 6 cut(s) 74, 373, 469, 654, 1042, 1168
BspHI TCATGA 1 cut(s) 936
BspLI GGNNCC 8 cut(s) 58, 300, 301, 471, 685, 1044, 1173, 1313
BspPI GGATC 1 cut(s) 509
BsrDI GCAATG 1 cut(s) 832
BsrI ACTGG 2 cut(s) 352, 881
BssECI CCNNGG 5 cut(s) 52, 423, 665, 818, 1274
BssMI GATC 3 cut(s) 40, 514, 1297
BssSI CACGAG 1 cut(s) 807
BssT1I CCWWGG 2 cut(s) 52, 665
Bst2BI CACGAG 1 cut(s) 807
Bst2UI CCWGG 4 cut(s) 681, 819, 1275, 1304
Bst4CI ACNGT 2 cut(s) 874, 943
Bst6I CTCTTC 1 cut(s) 560
BstBAI YACGTR 1 cut(s) 776
BstC8I GCNNGC 2 cut(s) 337, 672
BstDEI CTNAG 8 cut(s) 61, 381, 405, 477, 641, 909, 1050, 1176
BstDSI CCRYGG 1 cut(s) 423
BstENI CCTNNNNNAGG 2 cut(s) 696, 1253
BstF5I GGATG 3 cut(s) 402, 1031, 1060
BstHHI GCGC 1 cut(s) 341
BstKTI GATC 3 cut(s) 43, 517, 1300
BstMAI GTCTC 2 cut(s) 138, 918
BstMBI GATC 3 cut(s) 40, 514, 1297
BstMWI GCNNNNNNNGC 3 cut(s) 72, 315, 338
BstNI CCWGG 4 cut(s) 681, 819, 1275, 1304
BstNSI RCATGY 1 cut(s) 456
BstPAI GACNNNNGTC 1 cut(s) 1113
BstSCI CCNGG 6 cut(s) 417, 531, 679, 817, 1273, 1302
BstSFI CTRYAG 1 cut(s) 708
BstSLI GKGCMC 1 cut(s) 303
BstSNI TACGTA 1 cut(s) 776
BstV1I GCAGC 3 cut(s) 165, 200, 338
BstV2I GAAGAC 1 cut(s) 806
BstXI CCANNNNNNTGG 1 cut(s) 1322
Bsu36I CCTNAGG 1 cut(s) 61
BsuRI GGCC 6 cut(s) 301, 332, 422, 670, 732, 1290
BtgI CCRYGG 1 cut(s) 423
BtgZI GCGATG 1 cut(s) 234
BtsCI GGATG 3 cut(s) 402, 1031, 1060
BtsI GCAGTG 2 cut(s) 512, 1220
BtsIMutI CAGTG 4 cut(s) 512, 879, 1024, 1220
Cac8I GCNNGC 2 cut(s) 337, 672
CciI TCATGA 1 cut(s) 936
CfoI GCGC 1 cut(s) 341
Cfr13I GGNCC 9 cut(s) 299, 300, 420, 648, 683, 701, 1043, 1172, 1289
Csp6I GTAC 3 cut(s) 79, 409, 773
CviAII CATG 4 cut(s) 388, 413, 453, 937
CviQI GTAC 3 cut(s) 79, 409, 773
DdeI CTNAG 8 cut(s) 61, 381, 405, 477, 641, 909, 1050, 1176
DpnI GATC 3 cut(s) 42, 516, 1299
DpnII GATC 3 cut(s) 40, 514, 1297
EaeI YGGCCR 1 cut(s) 330
Eam1104I CTCTTC 1 cut(s) 560
EarI CTCTTC 1 cut(s) 560
Ecl136II GAGCTC 1 cut(s) 640
Eco105I TACGTA 1 cut(s) 776
Eco130I CCWWGG 2 cut(s) 52, 665
Eco147I AGGCCT 1 cut(s) 670
Eco24I GRGCYC 3 cut(s) 303, 642, 963
Eco47I GGWCC 5 cut(s) 648, 683, 701, 1043, 1172
Eco53kI GAGCTC 1 cut(s) 640
Eco57I CTGAAG 2 cut(s) 738, 1000
Eco81I CCTNAGG 1 cut(s) 61
EcoICRI GAGCTC 1 cut(s) 640
EcoNI CCTNNNNNAGG 2 cut(s) 696, 1253
EcoO109I RGGNCCY 3 cut(s) 299, 300, 1172
EcoRII CCWGG 4 cut(s) 679, 817, 1273, 1302
EcoT14I CCWWGG 2 cut(s) 52, 665
EcoT38I GRGCYC 3 cut(s) 303, 642, 963
ErhI CCWWGG 2 cut(s) 52, 665
FaeI CATG 4 cut(s) 391, 416, 456, 940
FaqI GGGAC 1 cut(s) 601
FatI CATG 4 cut(s) 387, 412, 452, 936
Fnu4HI GCNGC 4 cut(s) 154, 189, 333, 352
FokI GGATG 3 cut(s) 409, 1038, 1067
FriOI GRGCYC 3 cut(s) 303, 642, 963
Fsp4HI GCNGC 4 cut(s) 154, 189, 333, 352
FspBI CTAG 1 cut(s) 1362
GlaI GCGC 1 cut(s) 340
GluI GCNGC 4 cut(s) 154, 189, 333, 352
GsaI CCCAGC 1 cut(s) 30
GsuI CTGGAG 1 cut(s) 1286
HaeIII GGCC 6 cut(s) 301, 332, 422, 670, 732, 1290
HapII CCGG 4 cut(s) 418, 473, 518, 532
HhaI GCGC 1 cut(s) 341
Hin1II CATG 4 cut(s) 391, 416, 456, 940
Hin6I GCGC 1 cut(s) 339
HinP1I GCGC 1 cut(s) 339
HincII GTYRAC 1 cut(s) 870
HindII GTYRAC 1 cut(s) 870
HindIII AAGCTT 1 cut(s) 93
HinfI GANTC 6 cut(s) 320, 464, 557, 596, 676, 948
HpaII CCGG 4 cut(s) 418, 473, 518, 532
HphI GGTGA 4 cut(s) 185, 454, 907, 1072
Hpy166II GTNNAC 1 cut(s) 870
Hpy188I TCNGA 4 cut(s) 45, 562, 795, 1051
Hpy188III TCNNGA 4 cut(s) 586, 651, 937, 1175
Hpy8I GTNNAC 1 cut(s) 870
HpyAV CCTTC 4 cut(s) 762, 871, 1033, 1259
HpyCH4III ACNGT 2 cut(s) 874, 943
HpyCH4IV ACGT 4 cut(s) 81, 590, 775, 1240
HpyCH4V TGCA 6 cut(s) 267, 634, 836, 931, 1213, 1234
HpyF10VI GCNNNNNNNGC 3 cut(s) 72, 315, 338
HpyF3I CTNAG 8 cut(s) 61, 381, 405, 477, 641, 909, 1050, 1176
HpySE526I ACGT 4 cut(s) 81, 590, 775, 1240
Hsp92II CATG 4 cut(s) 391, 416, 456, 940
HspAI GCGC 1 cut(s) 339
Kzo9I GATC 3 cut(s) 40, 514, 1297
LmnI GCTCC 5 cut(s) 56, 258, 637, 822, 1317
Lsp1109I GCAGC 3 cut(s) 165, 200, 338
LweI GCATC 1 cut(s) 751
MaeI CTAG 1 cut(s) 1362
MaeII ACGT 4 cut(s) 81, 590, 775, 1240
MaeIII GTNAC 1 cut(s) 1241
MalI GATC 3 cut(s) 42, 516, 1299
MboI GATC 3 cut(s) 40, 514, 1297
MboII GAAGA 7 cut(s) 577, 806, 910, 981, 1006, 1048, 1220
MhlI GDGCHC 4 cut(s) 303, 642, 963, 1222
MluCI AATT 5 cut(s) 101, 496, 580, 1203, 1326
MlyI GAGTC 3 cut(s) 329, 458, 566
MmeI TCCRAC 4 cut(s) 540, 925, 1003, 1072
MroXI GAANNNNTTC 2 cut(s) 973, 1069
MseI TTAA 3 cut(s) 998, 1077, 1366
MspI CCGG 4 cut(s) 418, 473, 518, 532
MspR9I CCNGG 6 cut(s) 419, 533, 681, 819, 1275, 1304
MvaI CCWGG 4 cut(s) 681, 819, 1275, 1304
MwoI GCNNNNNNNGC 3 cut(s) 72, 315, 338
NciI CCSGG 2 cut(s) 419, 533
NdeII GATC 3 cut(s) 40, 514, 1297
NlaIII CATG 4 cut(s) 391, 416, 456, 940
NlaIV GGNNCC 8 cut(s) 58, 300, 301, 471, 685, 1044, 1173, 1313
NspI RCATGY 1 cut(s) 456
PagI TCATGA 1 cut(s) 936
PceI AGGCCT 1 cut(s) 670
PdmI GAANNNNTTC 2 cut(s) 973, 1069
PfeI GAWTC 3 cut(s) 596, 676, 948
PfoI TCCNGGA 2 cut(s) 679, 1302
PkrI GCNGC 4 cut(s) 155, 190, 334, 353
PleI GAGTC 3 cut(s) 328, 458, 565
PpsI GAGTC 3 cut(s) 328, 458, 565
Ppu21I YACGTR 1 cut(s) 776
PpuMI RGGWCCY 1 cut(s) 1172
PshAI GACNNNNGTC 1 cut(s) 1113
Psp124BI GAGCTC 1 cut(s) 642
Psp5II RGGWCCY 1 cut(s) 1172
Psp6I CCWGG 4 cut(s) 679, 817, 1273, 1302
PspFI CCCAGC 1 cut(s) 26
PspGI CCWGG 4 cut(s) 679, 817, 1273, 1302
PspN4I GGNNCC 8 cut(s) 58, 300, 301, 471, 685, 1044, 1173, 1313
PspOMI GGGCCC 1 cut(s) 299
PspPI GGNCC 9 cut(s) 299, 300, 420, 648, 683, 701, 1043, 1172, 1289
PspPPI RGGWCCY 1 cut(s) 1172
RsaI GTAC 3 cut(s) 80, 410, 774
RsaNI GTAC 3 cut(s) 79, 409, 773
SacI GAGCTC 1 cut(s) 642
SaqAI TTAA 3 cut(s) 998, 1077, 1366
SatI GCNGC 4 cut(s) 154, 189, 333, 352
Sau3AI GATC 3 cut(s) 40, 514, 1297
Sau96I GGNCC 9 cut(s) 299, 300, 420, 648, 683, 701, 1043, 1172, 1289
SchI GAGTC 3 cut(s) 329, 458, 566
ScrFI CCNGG 6 cut(s) 419, 533, 681, 819, 1275, 1304
SduI GDGCHC 4 cut(s) 303, 642, 963, 1222
SfaNI GCATC 1 cut(s) 751
SfcI CTRYAG 1 cut(s) 708
SinI GGWCC 5 cut(s) 648, 683, 701, 1043, 1172
SmlI CTYRAG 1 cut(s) 128
SmoI CTYRAG 1 cut(s) 128
SnaBI TACGTA 1 cut(s) 776
Sse9I AATT 5 cut(s) 101, 496, 580, 1203, 1326
SseBI AGGCCT 1 cut(s) 670
SsiI CCGC 5 cut(s) 209, 259, 333, 602, 646
SspMI CTAG 1 cut(s) 1362
SstI GAGCTC 1 cut(s) 642
StuI AGGCCT 1 cut(s) 670
StyD4I CCNGG 6 cut(s) 417, 531, 679, 817, 1273, 1302
StyI CCWWGG 2 cut(s) 52, 665
TaaI ACNGT 2 cut(s) 874, 943
TaiI ACGT 4 cut(s) 84, 593, 778, 1243
TaqI TCGA 3 cut(s) 500, 513, 537
TasI AATT 5 cut(s) 101, 496, 580, 1203, 1326
TauI GCSGC 1 cut(s) 335
TfiI GAWTC 3 cut(s) 596, 676, 948
Tru1I TTAA 3 cut(s) 998, 1077, 1366
Tru9I TTAA 3 cut(s) 998, 1077, 1366
TscAI CASTG 4 cut(s) 512, 879, 1024, 1220
TseI GCWGC 3 cut(s) 153, 188, 351
TspDTI ATGAA 3 cut(s) 376, 875, 1062
TspGWI ACGGA 1 cut(s) 1035
TspRI CASTG 4 cut(s) 512, 879, 1024, 1220
VpaK11BI GGWCC 5 cut(s) 648, 683, 701, 1043, 1172
XagI CCTNNNNNAGG 2 cut(s) 696, 1253
XapI RAATTY 3 cut(s) 101, 580, 1326
XceI RCATGY 1 cut(s) 456
XmnI GAANNNNTTC 2 cut(s) 973, 1069
XspI CTAG 1 cut(s) 1362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.