mitochondrial saccharopine dehydrogenase-like oxidoreductase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G39410 |
| fragaria_vesca | FvH4_6g47610 FvH4_6g47650 FvH4_6g47650 FvH4_6g47700 |
| malus_domestica | MD09G1060600.v1.1 |
| prunus_persica | Prupe.3G260300_v2.0.a1 |
| pyrus_communis | pycom111g05100 |
| rosa_chinensis | RchiOBHm_Chr2g0166731 RchiOBHm_Chr2g0166761 RchiOBHm_Chr2g0166771 RchiOBHm_Chr4g0415091 |
| rosa_laevigata | RLG00000021643 RLG00000021646 RLG00000021664 RLG00000021667 |
| rosa_multiflora | Rmu_co8040738.1_g000001 Rmu_sc0000949.1_g000002 Rmu_sc0000949.1_g000005 Rmu_sc0002181.1_g000013 Rmu_sc0002181.1_g000015 Rmu_sc0002181.1_g000024 Rmu_sc0004406.1_g000008 |
| rosa_roxburghii | Rroxscaffold_2G00084230 Rroxscaffold_2G00084260 Rroxscaffold_2G00084280 Rroxscaffold_2G00084550 Rroxscaffold_2G00084590 Rroxscaffold_2G00084600 |
| rosa_rugosa | Rorug02G0525000 Rorug02G0525200 |
| rosa_samantha | Rh2AG591500 Rh2BG603200 Rh2BG603500 Rh2CG356500 Rh2CG574100 Rh2CG574500 Rh2DG614200 Rh2DG614300 Rh4BG125500 |
| rosa_wichuraiana | Rw2G049260 Rw2G049280 Rw2G049300 Rw4G016320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 62 |
| AccI | GTMKAC | 1 cut(s) | 519 |
| AccII | CGCG | 1 cut(s) | 1248 |
| AclWI | GGATC | 3 cut(s) | 242, 283, 320 |
| AcsI | RAATTY | 3 cut(s) | 107, 586, 1007 |
| AcuI | CTGAAG | 3 cut(s) | 744, 1202, 1292 |
| AcyI | GRCGYC | 1 cut(s) | 63 |
| AfaI | GTAC | 4 cut(s) | 86, 416, 599, 780 |
| AfeI | AGCGCT | 1 cut(s) | 1075 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 189, 190, 424, 544, 704, 990, 1187, 1261, 1265 |
| AgeI | ACCGGT | 1 cut(s) | 437 |
| AgsI | TTSAA | 2 cut(s) | 14, 502 |
| AjnI | CCWGG | 2 cut(s) | 685, 823 |
| AluBI | AGCT | 9 cut(s) | 101, 146, 558, 646, 671, 754, 890, 1280, 1361 |
| AluI | AGCT | 9 cut(s) | 101, 146, 558, 646, 671, 754, 890, 1280, 1361 |
| Alw21I | GWGCWC | 3 cut(s) | 648, 849, 1228 |
| Alw26I | GTCTC | 3 cut(s) | 144, 261, 428 |
| AlwI | GGATC | 3 cut(s) | 242, 283, 320 |
| Aor51HI | AGCGCT | 1 cut(s) | 1075 |
| AoxI | GGCC | 4 cut(s) | 304, 736, 1178, 1294 |
| ApeKI | GCWGC | 2 cut(s) | 194, 357 |
| ApoI | RAATTY | 3 cut(s) | 107, 586, 1007 |
| AsiGI | ACCGGT | 1 cut(s) | 437 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1075 |
| AspLEI | GCGC | 4 cut(s) | 65, 347, 412, 1076 |
| AspS9I | GGNCC | 7 cut(s) | 305, 654, 689, 707, 1049, 1178, 1295 |
| AsuC2I | CCSGG | 2 cut(s) | 524, 539 |
| AsuHPI | GGTGA | 4 cut(s) | 67, 201, 335, 1078 |
| AsuII | TTCGAA | 1 cut(s) | 1352 |
| AvaII | GGWCC | 4 cut(s) | 654, 689, 707, 1049 |
| BanI | GGYRCC | 1 cut(s) | 62 |
| BanII | GRGCYC | 2 cut(s) | 648, 969 |
| BbsI | GAAGAC | 1 cut(s) | 1298 |
| Bbv12I | GWGCWC | 3 cut(s) | 648, 849, 1228 |
| BbvI | GCAGC | 2 cut(s) | 206, 344 |
| BccI | CCATC | 4 cut(s) | 227, 397, 1026, 1168 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 70, 104 |
| BciT130I | CCWGG | 2 cut(s) | 687, 825 |
| BcnI | CCSGG | 2 cut(s) | 524, 539 |
| BcoDI | GTCTC | 3 cut(s) | 144, 261, 428 |
| BfaI | CTAG | 1 cut(s) | 143 |
| BfoI | RGCGCY | 2 cut(s) | 66, 1077 |
| BisI | GCNGC | 5 cut(s) | 195, 234, 339, 358, 429 |
| BlpI | GCTNAGC | 1 cut(s) | 672 |
| BlsI | GCNGC | 5 cut(s) | 196, 235, 340, 359, 430 |
| Bme1390I | CCNGG | 4 cut(s) | 524, 539, 687, 825 |
| Bme18I | GGWCC | 4 cut(s) | 654, 689, 707, 1049 |
| BmgT120I | GGNCC | 7 cut(s) | 305, 654, 689, 707, 1049, 1178, 1295 |
| BmiI | GGNNCC | 8 cut(s) | 64, 307, 384, 913, 1050, 1051, 1179, 1319 |
| BmrFI | CCNGG | 4 cut(s) | 524, 539, 687, 825 |
| BmsI | GCATC | 1 cut(s) | 757 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1119 |
| BpiI | GAAGAC | 1 cut(s) | 1298 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1257, 1289 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 672 |
| Bpu14I | TTCGAA | 1 cut(s) | 1352 |
| BpuEI | CTTGAG | 2 cut(s) | 119, 863 |
| BpuMI | CCSGG | 2 cut(s) | 524, 539 |
| BsaAI | YACGTR | 1 cut(s) | 782 |
| BsaHI | GRCGYC | 1 cut(s) | 63 |
| BsaI | GGTCTC | 1 cut(s) | 428 |
| BsaJI | CCNNGG | 4 cut(s) | 58, 418, 814, 824 |
| BsaWI | WCCGGW | 1 cut(s) | 437 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 243, 273, 374, 398, 404, 428, 476, 506 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 189, 190, 424, 544, 704, 990, 1187, 1261, 1265 |
| Bse118I | RCCGGY | 4 cut(s) | 77, 152, 353, 437 |
| Bse1I | ACTGG | 1 cut(s) | 1306 |
| BseBI | CCWGG | 2 cut(s) | 687, 825 |
| BseDI | CCNNGG | 4 cut(s) | 58, 418, 814, 824 |
| BseGI | GGATG | 3 cut(s) | 219, 408, 1037 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 189, 190, 424, 544, 704, 990, 1187, 1261, 1265 |
| BseMII | CTCAG | 2 cut(s) | 378, 1173 |
| BseNI | ACTGG | 1 cut(s) | 1306 |
| BseRI | GAGGAG | 3 cut(s) | 684, 687, 1281 |
| BseXI | GCAGC | 2 cut(s) | 206, 344 |
| BseYI | CCCAGC | 2 cut(s) | 613, 1276 |
| BsgI | GTGCAG | 1 cut(s) | 256 |
| Bsh1236I | CGCG | 1 cut(s) | 1248 |
| Bsh1285I | CGRYCG | 2 cut(s) | 157, 951 |
| BshFI | GGCC | 4 cut(s) | 306, 738, 1180, 1296 |
| BshNI | GGYRCC | 1 cut(s) | 62 |
| BshTI | ACCGGT | 1 cut(s) | 437 |
| BsiEI | CGRYCG | 2 cut(s) | 157, 951 |
| BsiHKAI | GWGCWC | 3 cut(s) | 648, 849, 1228 |
| BsiWI | CGTACG | 1 cut(s) | 597 |
| BslFI | GGGAC | 2 cut(s) | 607, 1035 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 189, 190, 424, 544, 704, 990, 1187, 1261, 1265 |
| BsmAI | GTCTC | 3 cut(s) | 144, 261, 428 |
| BsmBI | CGTCTC | 1 cut(s) | 261 |
| BsmFI | GGGAC | 2 cut(s) | 607, 1035 |
| BsnI | GGCC | 4 cut(s) | 306, 738, 1180, 1296 |
| Bso31I | GGTCTC | 1 cut(s) | 428 |
| Bsp119I | TTCGAA | 1 cut(s) | 1352 |
| Bsp1286I | GDGCHC | 4 cut(s) | 648, 849, 969, 1228 |
| Bsp143I | GATC | 4 cut(s) | 46, 247, 288, 325 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 672 |
| Bsp19I | CCATGG | 1 cut(s) | 418 |
| BspANI | GGCC | 4 cut(s) | 306, 738, 1180, 1296 |
| BspCNI | CTCAG | 2 cut(s) | 379, 1174 |
| BspFNI | CGCG | 1 cut(s) | 1248 |
| BspHI | TCATGA | 1 cut(s) | 942 |
| BspLI | GGNNCC | 8 cut(s) | 64, 307, 384, 913, 1050, 1051, 1179, 1319 |
| BspPI | GGATC | 3 cut(s) | 242, 283, 320 |
| BspQI | GCTCTTC | 1 cut(s) | 661 |
| BspT104I | TTCGAA | 1 cut(s) | 1352 |
| BspT107I | GGYRCC | 1 cut(s) | 62 |
| BspTNI | GGTCTC | 1 cut(s) | 428 |
| BsrFI | RCCGGY | 4 cut(s) | 77, 152, 353, 437 |
| BsrI | ACTGG | 1 cut(s) | 1306 |
| BssAI | RCCGGY | 4 cut(s) | 77, 152, 353, 437 |
| BssECI | CCNNGG | 4 cut(s) | 58, 418, 814, 824 |
| BssMI | GATC | 4 cut(s) | 46, 247, 288, 325 |
| BssNI | GRCGYC | 1 cut(s) | 63 |
| BssT1I | CCWWGG | 1 cut(s) | 418 |
| Bst2UI | CCWGG | 2 cut(s) | 687, 825 |
| Bst4CI | ACNGT | 6 cut(s) | 216, 255, 323, 880, 924, 949 |
| Bst6I | CTCTTC | 2 cut(s) | 566, 661 |
| BstACI | GRCGYC | 1 cut(s) | 63 |
| BstBAI | YACGTR | 1 cut(s) | 782 |
| BstBI | TTCGAA | 1 cut(s) | 1352 |
| BstC8I | GCNNGC | 6 cut(s) | 31, 123, 343, 678, 888, 1282 |
| BstDEI | CTNAG | 3 cut(s) | 387, 672, 1182 |
| BstDSI | CCRYGG | 2 cut(s) | 418, 814 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 702, 988, 1259 |
| BstF5I | GGATG | 3 cut(s) | 219, 408, 1037 |
| BstFNI | CGCG | 1 cut(s) | 1248 |
| BstH2I | RGCGCY | 2 cut(s) | 66, 1077 |
| BstHHI | GCGC | 4 cut(s) | 65, 347, 412, 1076 |
| BstKTI | GATC | 4 cut(s) | 49, 250, 291, 328 |
| BstMAI | GTCTC | 3 cut(s) | 144, 261, 428 |
| BstMBI | GATC | 4 cut(s) | 46, 247, 288, 325 |
| BstMCI | CGRYCG | 2 cut(s) | 157, 951 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 69, 78, 312, 344, 677 |
| BstNI | CCWGG | 2 cut(s) | 687, 825 |
| BstNSI | RCATGY | 1 cut(s) | 462 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1119 |
| BstSCI | CCNGG | 4 cut(s) | 522, 537, 685, 823 |
| BstSNI | TACGTA | 1 cut(s) | 782 |
| BstUI | CGCG | 1 cut(s) | 1248 |
| BstV1I | GCAGC | 2 cut(s) | 206, 344 |
| BstV2I | GAAGAC | 1 cut(s) | 1298 |
| BsuRI | GGCC | 4 cut(s) | 306, 738, 1180, 1296 |
| BtgI | CCRYGG | 2 cut(s) | 418, 814 |
| BtsCI | GGATG | 3 cut(s) | 219, 408, 1037 |
| BtsI | GCAGTG | 1 cut(s) | 518 |
| BtsIMutI | CAGTG | 5 cut(s) | 518, 885, 920, 1030, 1226 |
| Cac8I | GCNNGC | 6 cut(s) | 31, 123, 343, 678, 888, 1282 |
| CciI | TCATGA | 1 cut(s) | 942 |
| CfoI | GCGC | 4 cut(s) | 65, 347, 412, 1076 |
| Cfr10I | RCCGGY | 4 cut(s) | 77, 152, 353, 437 |
| Cfr13I | GGNCC | 7 cut(s) | 305, 654, 689, 707, 1049, 1178, 1295 |
| CseI | GACGC | 1 cut(s) | 289 |
| Csp6I | GTAC | 4 cut(s) | 85, 415, 598, 779 |
| CspAI | ACCGGT | 1 cut(s) | 437 |
| CviAII | CATG | 5 cut(s) | 419, 459, 943, 1103, 1153 |
| CviQI | GTAC | 4 cut(s) | 85, 415, 598, 779 |
| DdeI | CTNAG | 3 cut(s) | 387, 672, 1182 |
| DinI | GGCGCC | 1 cut(s) | 64 |
| DpnI | GATC | 4 cut(s) | 48, 249, 290, 327 |
| DpnII | GATC | 4 cut(s) | 46, 247, 288, 325 |
| Eam1104I | CTCTTC | 2 cut(s) | 566, 661 |
| EarI | CTCTTC | 2 cut(s) | 566, 661 |
| EciI | GGCGGA | 3 cut(s) | 302, 446, 497 |
| Ecl136II | GAGCTC | 1 cut(s) | 646 |
| Eco105I | TACGTA | 1 cut(s) | 782 |
| Eco130I | CCWWGG | 1 cut(s) | 418 |
| Eco24I | GRGCYC | 2 cut(s) | 648, 969 |
| Eco31I | GGTCTC | 1 cut(s) | 428 |
| Eco47I | GGWCC | 4 cut(s) | 654, 689, 707, 1049 |
| Eco47III | AGCGCT | 1 cut(s) | 1075 |
| Eco53kI | GAGCTC | 1 cut(s) | 646 |
| Eco57I | CTGAAG | 3 cut(s) | 744, 1202, 1292 |
| EcoICRI | GAGCTC | 1 cut(s) | 646 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 702, 988, 1259 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1049, 1178 |
| EcoRII | CCWGG | 2 cut(s) | 685, 823 |
| EcoT14I | CCWWGG | 1 cut(s) | 418 |
| EcoT38I | GRGCYC | 2 cut(s) | 648, 969 |
| EgeI | GGCGCC | 1 cut(s) | 64 |
| EheI | GGCGCC | 1 cut(s) | 64 |
| ErhI | CCWWGG | 1 cut(s) | 418 |
| Esp3I | CGTCTC | 1 cut(s) | 261 |
| FaeI | CATG | 5 cut(s) | 422, 462, 946, 1106, 1156 |
| FaqI | GGGAC | 2 cut(s) | 607, 1035 |
| FatI | CATG | 5 cut(s) | 418, 458, 942, 1102, 1152 |
| FauI | CCCGC | 2 cut(s) | 130, 371 |
| FblI | GTMKAC | 1 cut(s) | 519 |
| Fnu4HI | GCNGC | 5 cut(s) | 195, 234, 339, 358, 429 |
| FokI | GGATG | 3 cut(s) | 206, 415, 1044 |
| FriOI | GRGCYC | 2 cut(s) | 648, 969 |
| Fsp4HI | GCNGC | 5 cut(s) | 195, 234, 339, 358, 429 |
| FspBI | CTAG | 1 cut(s) | 143 |
| GlaI | GCGC | 4 cut(s) | 64, 346, 411, 1075 |
| GluI | GCNGC | 5 cut(s) | 195, 234, 339, 358, 429 |
| GsaI | CCCAGC | 2 cut(s) | 617, 1280 |
| HaeII | RGCGCY | 2 cut(s) | 66, 1077 |
| HaeIII | GGCC | 4 cut(s) | 306, 738, 1180, 1296 |
| HgaI | GACGC | 1 cut(s) | 289 |
| HhaI | GCGC | 4 cut(s) | 65, 347, 412, 1076 |
| Hin1I | GRCGYC | 1 cut(s) | 63 |
| Hin1II | CATG | 5 cut(s) | 422, 462, 946, 1106, 1156 |
| Hin6I | GCGC | 4 cut(s) | 63, 345, 410, 1074 |
| HinP1I | GCGC | 4 cut(s) | 63, 345, 410, 1074 |
| HincII | GTYRAC | 2 cut(s) | 520, 876 |
| HindII | GTYRAC | 2 cut(s) | 520, 876 |
| HinfI | GANTC | 7 cut(s) | 470, 563, 602, 682, 838, 954, 978 |
| HphI | GGTGA | 4 cut(s) | 67, 201, 335, 1078 |
| Hpy166II | GTNNAC | 2 cut(s) | 520, 876 |
| Hpy188III | TCNNGA | 5 cut(s) | 657, 842, 943, 1039, 1310 |
| Hpy8I | GTNNAC | 2 cut(s) | 520, 876 |
| Hpy99I | CGWCG | 4 cut(s) | 92, 305, 335, 338 |
| HpyAV | CCTTC | 6 cut(s) | 48, 319, 768, 877, 1039, 1265 |
| HpyCH4III | ACNGT | 6 cut(s) | 216, 255, 323, 880, 924, 949 |
| HpyCH4IV | ACGT | 3 cut(s) | 87, 596, 781 |
| HpyCH4V | TGCA | 2 cut(s) | 273, 640 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 69, 78, 312, 344, 677 |
| HpyF3I | CTNAG | 3 cut(s) | 387, 672, 1182 |
| HpySE526I | ACGT | 3 cut(s) | 87, 596, 781 |
| Hsp92I | GRCGYC | 1 cut(s) | 63 |
| Hsp92II | CATG | 5 cut(s) | 422, 462, 946, 1106, 1156 |
| HspAI | GCGC | 4 cut(s) | 63, 345, 410, 1074 |
| KasI | GGCGCC | 1 cut(s) | 62 |
| KflI | GGGWCCC | 1 cut(s) | 1049 |
| Kzo9I | GATC | 4 cut(s) | 46, 247, 288, 325 |
| LguI | GCTCTTC | 1 cut(s) | 661 |
| LmnI | GCTCC | 4 cut(s) | 382, 643, 651, 1323 |
| Lsp1109I | GCAGC | 2 cut(s) | 206, 344 |
| LweI | GCATC | 1 cut(s) | 757 |
| MaeI | CTAG | 1 cut(s) | 143 |
| MaeII | ACGT | 3 cut(s) | 87, 596, 781 |
| MaeIII | GTNAC | 1 cut(s) | 918 |
| MalI | GATC | 4 cut(s) | 48, 249, 290, 327 |
| MboI | GATC | 4 cut(s) | 46, 247, 288, 325 |
| MboII | GAAGA | 8 cut(s) | 583, 678, 916, 992, 1054, 1070, 1298, 1366 |
| MfeI | CAATTG | 1 cut(s) | 295 |
| MhlI | GDGCHC | 4 cut(s) | 648, 849, 969, 1228 |
| MluCI | AATT | 6 cut(s) | 107, 295, 502, 586, 1007, 1209 |
| Mly113I | GGCGCC | 1 cut(s) | 63 |
| MlyI | GAGTC | 3 cut(s) | 464, 572, 847 |
| MmeI | TCCRAC | 4 cut(s) | 546, 931, 1009, 1078 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1075 |
| MseI | TTAA | 3 cut(s) | 1005, 1083, 1372 |
| MspA1I | CMGCKG | 1 cut(s) | 1280 |
| MspR9I | CCNGG | 4 cut(s) | 524, 539, 687, 825 |
| MunI | CAATTG | 1 cut(s) | 295 |
| MvaI | CCWGG | 2 cut(s) | 687, 825 |
| MvnI | CGCG | 1 cut(s) | 1248 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 69, 78, 312, 344, 677 |
| NarI | GGCGCC | 1 cut(s) | 63 |
| NciI | CCSGG | 2 cut(s) | 524, 539 |
| NcoI | CCATGG | 1 cut(s) | 418 |
| NdeII | GATC | 4 cut(s) | 46, 247, 288, 325 |
| NlaIII | CATG | 5 cut(s) | 422, 462, 946, 1106, 1156 |
| NlaIV | GGNNCC | 8 cut(s) | 64, 307, 384, 913, 1050, 1051, 1179, 1319 |
| NmeAIII | GCCGAG | 1 cut(s) | 39 |
| NmuCI | GTSAC | 1 cut(s) | 918 |
| NspI | RCATGY | 1 cut(s) | 462 |
| NspV | TTCGAA | 1 cut(s) | 1352 |
| PagI | TCATGA | 1 cut(s) | 942 |
| PciSI | GCTCTTC | 1 cut(s) | 661 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 327 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1075 |
| PfeI | GAWTC | 4 cut(s) | 602, 682, 954, 978 |
| Pfl23II | CGTACG | 1 cut(s) | 597 |
| PinAI | ACCGGT | 1 cut(s) | 437 |
| PkrI | GCNGC | 5 cut(s) | 196, 235, 340, 359, 430 |
| PleI | GAGTC | 3 cut(s) | 464, 571, 846 |
| PluTI | GGCGCC | 1 cut(s) | 66 |
| PpsI | GAGTC | 3 cut(s) | 464, 571, 846 |
| Ppu21I | YACGTR | 1 cut(s) | 782 |
| PpuMI | RGGWCCY | 1 cut(s) | 1049 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1119 |
| Psp124BI | GAGCTC | 1 cut(s) | 648 |
| Psp5II | RGGWCCY | 1 cut(s) | 1049 |
| Psp6I | CCWGG | 2 cut(s) | 685, 823 |
| PspFI | CCCAGC | 2 cut(s) | 613, 1276 |
| PspGI | CCWGG | 2 cut(s) | 685, 823 |
| PspLI | CGTACG | 1 cut(s) | 597 |
| PspN4I | GGNNCC | 8 cut(s) | 64, 307, 384, 913, 1050, 1051, 1179, 1319 |
| PspPI | GGNCC | 7 cut(s) | 305, 654, 689, 707, 1049, 1178, 1295 |
| PspPPI | RGGWCCY | 1 cut(s) | 1049 |
| PvuII | CAGCTG | 1 cut(s) | 1280 |
| RsaI | GTAC | 4 cut(s) | 86, 416, 599, 780 |
| RsaNI | GTAC | 4 cut(s) | 85, 415, 598, 779 |
| SacI | GAGCTC | 1 cut(s) | 648 |
| SalI | GTCGAC | 1 cut(s) | 518 |
| SapI | GCTCTTC | 1 cut(s) | 661 |
| SaqAI | TTAA | 3 cut(s) | 1005, 1083, 1372 |
| SatI | GCNGC | 5 cut(s) | 195, 234, 339, 358, 429 |
| Sau3AI | GATC | 4 cut(s) | 46, 247, 288, 325 |
| Sau96I | GGNCC | 7 cut(s) | 305, 654, 689, 707, 1049, 1178, 1295 |
| SchI | GAGTC | 3 cut(s) | 464, 572, 847 |
| ScrFI | CCNGG | 4 cut(s) | 524, 539, 687, 825 |
| SduI | GDGCHC | 4 cut(s) | 648, 849, 969, 1228 |
| SfaNI | GCATC | 1 cut(s) | 757 |
| SfoI | GGCGCC | 1 cut(s) | 64 |
| SfuI | TTCGAA | 1 cut(s) | 1352 |
| SinI | GGWCC | 4 cut(s) | 654, 689, 707, 1049 |
| SmlI | CTYRAG | 2 cut(s) | 134, 842 |
| SmoI | CTYRAG | 2 cut(s) | 134, 842 |
| SnaBI | TACGTA | 1 cut(s) | 782 |
| Sse9I | AATT | 6 cut(s) | 107, 295, 502, 586, 1007, 1209 |
| SspDI | GGCGCC | 1 cut(s) | 62 |
| SspMI | CTAG | 1 cut(s) | 143 |
| SstI | GAGCTC | 1 cut(s) | 648 |
| StyD4I | CCNGG | 4 cut(s) | 522, 537, 685, 823 |
| StyI | CCWWGG | 1 cut(s) | 418 |
| TaaI | ACNGT | 6 cut(s) | 216, 255, 323, 880, 924, 949 |
| TaiI | ACGT | 3 cut(s) | 90, 599, 784 |
| TaqI | TCGA | 5 cut(s) | 468, 506, 519, 1341, 1352 |
| TasI | AATT | 6 cut(s) | 107, 295, 502, 586, 1007, 1209 |
| TauI | GCSGC | 3 cut(s) | 236, 341, 431 |
| TfiI | GAWTC | 4 cut(s) | 602, 682, 954, 978 |
| Tru1I | TTAA | 3 cut(s) | 1005, 1083, 1372 |
| Tru9I | TTAA | 3 cut(s) | 1005, 1083, 1372 |
| TscAI | CASTG | 5 cut(s) | 518, 885, 927, 1030, 1226 |
| TseFI | GTSAC | 1 cut(s) | 918 |
| TseI | GCWGC | 2 cut(s) | 194, 357 |
| Tsp45I | GTSAC | 1 cut(s) | 918 |
| TspDTI | ATGAA | 1 cut(s) | 1068 |
| TspRI | CASTG | 5 cut(s) | 518, 885, 927, 1030, 1226 |
| VpaK11BI | GGWCC | 4 cut(s) | 654, 689, 707, 1049 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 702, 988, 1259 |
| XapI | RAATTY | 3 cut(s) | 107, 586, 1007 |
| XceI | RCATGY | 1 cut(s) | 462 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 821, 922 |
| XmiI | GTMKAC | 1 cut(s) | 519 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1075 |
| XspI | CTAG | 1 cut(s) | 143 |