Rh2DG614200

mitochondrial saccharopine dehydrogenase-like oxidoreductase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
84570473 .. 84571927
1455 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG614200.1

Sequence Viewer

Length: 1047 bp
ATGTCAGACCTCCCCAACCCTCCCTACGATCTCATCATCCTCGGCGCCTCCGGCTTCACCGGAAAATACGTCGTGAAAGAAGCCCTCAAGTTCCTCAACACCCCCTCCTCACCTCTCAAGTCTCTAGCCTTAGCCGGCCGCAACCCCACGAAGCTCTCCCAAACCCTCAACTGGGCCACCGCCCCAAACCCACCTCCCTCCATTCCCATCCTCACCGCCGACACCACCGATCCCCCGTCCCTCCGCCGCCTCTGCTCCCAAACCCGCCTCATCCTCAACTGCGTGGGCCCCTTCCGCCTCTACGGCGACCCCGTCGTCGCCGCGTGCGTTGAGACCGGCTGTGATTATCTCGACATATCCGGAGAGCCGGAGTTCATGGAGAGGATGGAGGCCAGTTATTTCGATAAGGCGGCGGAGAAGGGCTCATTGGTCATTTCGGCTTGTGGGTTTGACTCTGTTCCGGCGGAGTTTGGATTGATGTTCAACTCGAGGCAGTGGGTGGGGGCGGCGGTGCCGAATAGGGTGGAGGCTTATCTGAGCTTGGAGTCTGAGAAGAGAATTGTTGGGAACTTCGGGACGTTTGAGTCGGCGGTGTTGGGTGTGGCTAATGCGGATAAGTTGATGGAGCTCCGGCGGTCCAGGCCTAAAAAACCGAGGCCGGAGATTCCTGGTCCTCCTCCTTCTAAAGGACCAACCATTGAACACCAGAAAAAGATTGGCCTTTGGGCTGTGAAGCTACCTTCAGCAGATGCTATCGTTGTACGAAGAACACTTGGAACTCTGACCGAAAATCCCGGCGGTCTTCCAGGGAGGAATGAGAGTGATGAACACATTAAAAAAAGAGAAGCCTTCTGGTCAACAGTGAAGCCAGCGCATTTCGGGGTGAAGATAGGCACCAAGTCTCTGTTGGGCATTTTTCGAATCATGACAGTTGGGATCTTTATTGGGCTCTTGGGTCAGTTTTCCTTTGGGAGGTGGCTTCTCTTAAAGTTTCCCTCATTTTTCAGTGTTGGATGGTTCAGGAAGCAGGGTCCCTCCGATGAGTAG

Protein Analysis

348

Amino Acids

38.04

Weight (kDa)

9.3

Isoelectric Point (pI)

44.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sacchrp_dh_NADP PF03435 12 - 144 3.5e-11 Saccharopine dehydrogenase NADP binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 314, 583
AccB1I GGYRCC 3 cut(s) 44, 511, 893
AccII CGCG 1 cut(s) 323
AccIII TCCGGA 1 cut(s) 359
AclWI GGATC 2 cut(s) 224, 944
AcoI YGGCCR 1 cut(s) 136
AcuI CTGAAG 1 cut(s) 726
AcyI GRCGYC 1 cut(s) 45
AfaI GTAC 1 cut(s) 762
AfiI CCNNNNNNNGG 4 cut(s) 171, 172, 686, 972
AgsI TTSAA 2 cut(s) 484, 701
AjnI CCWGG 3 cut(s) 638, 667, 805
AjuI GAANNNNNNNTTGG 2 cut(s) 410, 442
AluBI AGCT 4 cut(s) 154, 540, 628, 736
AluI AGCT 4 cut(s) 154, 540, 628, 736
Alw21I GWGCWC 1 cut(s) 630
Alw26I GTCTC 3 cut(s) 126, 326, 906
AlwI GGATC 2 cut(s) 224, 944
Ama87I CYCGRG 1 cut(s) 487
Aor13HI TCCGGA 1 cut(s) 359
AoxI GGCC 7 cut(s) 136, 174, 286, 390, 641, 656, 718
ApaI GGGCCC 1 cut(s) 290
AspLEI GCGC 2 cut(s) 47, 874
AspS9I GGNCC 7 cut(s) 174, 286, 287, 636, 671, 689, 1031
AsuC2I CCSGG 1 cut(s) 795
AsuHPI GGTGA 4 cut(s) 49, 102, 205, 895
AsuII TTCGAA 1 cut(s) 919
AvaI CYCGRG 1 cut(s) 487
AvaII GGWCC 4 cut(s) 636, 671, 689, 1031
BaeGI GKGCMC 1 cut(s) 290
BanI GGYRCC 3 cut(s) 44, 511, 893
BanII GRGCYC 4 cut(s) 290, 425, 630, 951
BbsI GAAGAC 1 cut(s) 794
Bbv12I GWGCWC 1 cut(s) 630
BccI CCATC 4 cut(s) 215, 379, 616, 1008
BceAI ACGGC 1 cut(s) 319
BciT130I CCWGG 3 cut(s) 640, 669, 807
BcnI CCSGG 1 cut(s) 795
BcoDI GTCTC 3 cut(s) 126, 326, 906
BfaI CTAG 1 cut(s) 125
BfoI RGCGCY 1 cut(s) 48
BglI GCCNNNNNGGC 1 cut(s) 303
BisI GCNGC 5 cut(s) 139, 247, 321, 411, 507
BlsI GCNGC 5 cut(s) 140, 248, 322, 412, 508
Bme1390I CCNGG 4 cut(s) 640, 669, 795, 807
Bme18I GGWCC 4 cut(s) 636, 671, 689, 1031
BmeT110I CYCGRG 1 cut(s) 487
BmgT120I GGNCC 7 cut(s) 174, 286, 287, 636, 671, 689, 1031
BmiI GGNNCC 7 cut(s) 46, 288, 289, 513, 895, 1032, 1033
BmrFI CCNGG 4 cut(s) 640, 669, 795, 807
BmrI ACTGGG 1 cut(s) 181
BmsI GCATC 1 cut(s) 739
BmuI ACTGGG 1 cut(s) 181
BpiI GAAGAC 1 cut(s) 794
BplI GAGNNNNNCTC 2 cut(s) 407, 439
Bpu10I CCTNAGC 1 cut(s) 130
Bpu14I TTCGAA 1 cut(s) 919
BpuEI CTTGAG 2 cut(s) 71, 101
BpuMI CCSGG 1 cut(s) 795
BsaHI GRCGYC 1 cut(s) 45
BsaI GGTCTC 1 cut(s) 326
BsaJI CCNNGG 3 cut(s) 40, 653, 806
BsaWI WCCGGW 2 cut(s) 59, 359
BsaXI ACNNNNNCTCC 2 cut(s) 89, 119
Bsc4I CCNNNNNNNGG 4 cut(s) 171, 172, 686, 972
Bse118I RCCGGY 2 cut(s) 134, 335
Bse1I ACTGG 2 cut(s) 176, 393
BseAI TCCGGA 1 cut(s) 359
BseBI CCWGG 3 cut(s) 640, 669, 807
BseDI CCNNGG 3 cut(s) 40, 653, 806
BseGI GGATG 5 cut(s) 36, 207, 270, 390, 1019
BseLI CCNNNNNNNGG 4 cut(s) 171, 172, 686, 972
BseMII CTCAG 2 cut(s) 527, 540
BseNI ACTGG 2 cut(s) 176, 393
BseRI GAGGAG 2 cut(s) 97, 666
BseSI GKGCMC 1 cut(s) 290
BseX3I CGGCCG 1 cut(s) 136
Bsh1236I CGCG 1 cut(s) 323
Bsh1285I CGRYCG 1 cut(s) 139
BshFI GGCC 7 cut(s) 138, 176, 288, 392, 643, 658, 720
BshNI GGYRCC 3 cut(s) 44, 511, 893
BsiEI CGRYCG 1 cut(s) 139
BsiHKAI GWGCWC 1 cut(s) 630
BsiHKCI CYCGRG 1 cut(s) 487
BslFI GGGAC 3 cut(s) 223, 589, 1017
BslI CCNNNNNNNGG 4 cut(s) 171, 172, 686, 972
BsmAI GTCTC 3 cut(s) 126, 326, 906
BsmFI GGGAC 3 cut(s) 223, 589, 1017
BsnI GGCC 7 cut(s) 138, 176, 288, 392, 643, 658, 720
Bso31I GGTCTC 1 cut(s) 326
BsoBI CYCGRG 1 cut(s) 487
Bsp119I TTCGAA 1 cut(s) 919
Bsp120I GGGCCC 1 cut(s) 286
Bsp1286I GDGCHC 4 cut(s) 290, 425, 630, 951
Bsp13I TCCGGA 1 cut(s) 359
Bsp143I GATC 3 cut(s) 28, 229, 936
BspANI GGCC 7 cut(s) 138, 176, 288, 392, 643, 658, 720
BspCNI CTCAG 2 cut(s) 528, 541
BspEI TCCGGA 1 cut(s) 359
BspFNI CGCG 1 cut(s) 323
BspHI TCATGA 1 cut(s) 924
BspLI GGNNCC 7 cut(s) 46, 288, 289, 513, 895, 1032, 1033
BspPI GGATC 2 cut(s) 224, 944
BspT104I TTCGAA 1 cut(s) 919
BspT107I GGYRCC 3 cut(s) 44, 511, 893
BspTNI GGTCTC 1 cut(s) 326
BsrFI RCCGGY 2 cut(s) 134, 335
BsrI ACTGG 2 cut(s) 176, 393
BssAI RCCGGY 2 cut(s) 134, 335
BssECI CCNNGG 3 cut(s) 40, 653, 806
BssMI GATC 3 cut(s) 28, 229, 936
BssNI GRCGYC 1 cut(s) 45
Bst2UI CCWGG 3 cut(s) 640, 669, 807
Bst4CI ACNGT 2 cut(s) 862, 931
Bst6I CTCTTC 1 cut(s) 548
BstACI GRCGYC 1 cut(s) 45
BstBI TTCGAA 1 cut(s) 919
BstC8I GCNNGC 3 cut(s) 136, 325, 870
BstDEI CTNAG 3 cut(s) 130, 536, 549
BstENI CCTNNNNNAGG 2 cut(s) 684, 970
BstF5I GGATG 5 cut(s) 36, 207, 270, 390, 1019
BstFNI CGCG 1 cut(s) 323
BstH2I RGCGCY 1 cut(s) 48
BstHHI GCGC 2 cut(s) 47, 874
BstKTI GATC 3 cut(s) 31, 232, 939
BstMAI GTCTC 3 cut(s) 126, 326, 906
BstMBI GATC 3 cut(s) 28, 229, 936
BstMCI CGRYCG 1 cut(s) 139
BstMWI GCNNNNNNNGC 5 cut(s) 51, 252, 294, 303, 640
BstNI CCWGG 3 cut(s) 640, 669, 807
BstSCI CCNGG 4 cut(s) 638, 667, 793, 805
BstSLI GKGCMC 1 cut(s) 290
BstUI CGCG 1 cut(s) 323
BstV2I GAAGAC 1 cut(s) 794
BstX2I RGATCY 1 cut(s) 936
BstYI RGATCY 1 cut(s) 936
BstZI CGGCCG 1 cut(s) 136
BsuRI GGCC 7 cut(s) 138, 176, 288, 392, 643, 658, 720
BtsCI GGATG 5 cut(s) 36, 207, 270, 390, 1019
BtsI GCAGTG 1 cut(s) 500
BtsIMutI CAGTG 3 cut(s) 500, 867, 1012
Cac8I GCNNGC 3 cut(s) 136, 325, 870
CciI TCATGA 1 cut(s) 924
CfoI GCGC 2 cut(s) 47, 874
Cfr10I RCCGGY 2 cut(s) 134, 335
Cfr13I GGNCC 7 cut(s) 174, 286, 287, 636, 671, 689, 1031
Csp6I GTAC 1 cut(s) 761
CviAII CATG 2 cut(s) 376, 925
CviQI GTAC 1 cut(s) 761
DdeI CTNAG 3 cut(s) 130, 536, 549
DinI GGCGCC 1 cut(s) 46
DpnI GATC 3 cut(s) 30, 231, 938
DpnII GATC 3 cut(s) 28, 229, 936
DrdI GACNNNNNNGTC 2 cut(s) 314, 583
DseDI GACNNNNNNGTC 2 cut(s) 314, 583
EaeI YGGCCR 1 cut(s) 136
EagI CGGCCG 1 cut(s) 136
Eam1104I CTCTTC 1 cut(s) 548
EarI CTCTTC 1 cut(s) 548
EciI GGCGGA 4 cut(s) 233, 284, 428, 479
Ecl136II GAGCTC 1 cut(s) 628
EclXI CGGCCG 1 cut(s) 136
Eco147I AGGCCT 1 cut(s) 643
Eco24I GRGCYC 4 cut(s) 290, 425, 630, 951
Eco31I GGTCTC 1 cut(s) 326
Eco47I GGWCC 4 cut(s) 636, 671, 689, 1031
Eco52I CGGCCG 1 cut(s) 136
Eco53kI GAGCTC 1 cut(s) 628
Eco57I CTGAAG 1 cut(s) 726
Eco88I CYCGRG 1 cut(s) 487
EcoICRI GAGCTC 1 cut(s) 628
EcoNI CCTNNNNNAGG 2 cut(s) 684, 970
EcoO109I RGGNCCY 2 cut(s) 287, 1031
EcoRII CCWGG 3 cut(s) 638, 667, 805
EcoT38I GRGCYC 4 cut(s) 290, 425, 630, 951
EgeI GGCGCC 1 cut(s) 46
EheI GGCGCC 1 cut(s) 46
FaeI CATG 2 cut(s) 379, 928
FaiI YATR 3 cut(s) 356, 377, 926
FaqI GGGAC 3 cut(s) 223, 589, 1017
FatI CATG 2 cut(s) 375, 924
FauI CCCGC 1 cut(s) 272
Fnu4HI GCNGC 5 cut(s) 139, 247, 321, 411, 507
FokI GGATG 5 cut(s) 23, 194, 257, 397, 1026
FriOI GRGCYC 4 cut(s) 290, 425, 630, 951
Fsp4HI GCNGC 5 cut(s) 139, 247, 321, 411, 507
FspBI CTAG 1 cut(s) 125
GlaI GCGC 2 cut(s) 46, 873
GluI GCNGC 5 cut(s) 139, 247, 321, 411, 507
HaeII RGCGCY 1 cut(s) 48
HaeIII GGCC 7 cut(s) 138, 176, 288, 392, 643, 658, 720
HhaI GCGC 2 cut(s) 47, 874
Hin1I GRCGYC 1 cut(s) 45
Hin1II CATG 2 cut(s) 379, 928
Hin6I GCGC 2 cut(s) 45, 872
HinP1I GCGC 2 cut(s) 45, 872
HincII GTYRAC 1 cut(s) 858
HindII GTYRAC 1 cut(s) 858
HinfI GANTC 5 cut(s) 452, 545, 584, 664, 921
HphI GGTGA 4 cut(s) 49, 102, 205, 895
Hpy166II GTNNAC 1 cut(s) 858
Hpy188I TCNGA 5 cut(s) 7, 537, 550, 783, 1039
Hpy188III TCNNGA 6 cut(s) 73, 350, 360, 574, 925, 1021
Hpy8I GTNNAC 1 cut(s) 858
Hpy99I CGWCG 3 cut(s) 74, 317, 320
HpyAV CCTTC 5 cut(s) 301, 412, 690, 750, 859
HpyCH4III ACNGT 2 cut(s) 862, 931
HpyCH4IV ACGT 2 cut(s) 69, 578
HpyF10VI GCNNNNNNNGC 5 cut(s) 51, 252, 294, 303, 640
HpyF3I CTNAG 3 cut(s) 130, 536, 549
HpySE526I ACGT 2 cut(s) 69, 578
Hsp92I GRCGYC 1 cut(s) 45
Hsp92II CATG 2 cut(s) 379, 928
HspAI GCGC 2 cut(s) 45, 872
KasI GGCGCC 1 cut(s) 44
KflI GGGWCCC 1 cut(s) 1031
Kpn2I TCCGGA 1 cut(s) 359
KroI GCCGGC 1 cut(s) 134
KroNI GCCGGC 1 cut(s) 136
Kzo9I GATC 3 cut(s) 28, 229, 936
LmnI GCTCC 3 cut(s) 260, 625, 633
LweI GCATC 1 cut(s) 739
MaeI CTAG 1 cut(s) 125
MaeII ACGT 2 cut(s) 69, 578
MalI GATC 3 cut(s) 30, 231, 938
MboI GATC 3 cut(s) 28, 229, 936
MboII GAAGA 4 cut(s) 565, 777, 794, 898
MflI RGATCY 1 cut(s) 936
MhlI GDGCHC 4 cut(s) 290, 425, 630, 951
MluCI AATT 1 cut(s) 558
Mly113I GGCGCC 1 cut(s) 45
MlyI GAGTC 3 cut(s) 446, 554, 593
MmeI TCCRAC 1 cut(s) 991
MroI TCCGGA 1 cut(s) 359
MroNI GCCGGC 1 cut(s) 134
MseI TTAA 2 cut(s) 834, 986
MspR9I CCNGG 4 cut(s) 640, 669, 795, 807
MvaI CCWGG 3 cut(s) 640, 669, 807
MvnI CGCG 1 cut(s) 323
MwoI GCNNNNNNNGC 5 cut(s) 51, 252, 294, 303, 640
NaeI GCCGGC 1 cut(s) 136
NarI GGCGCC 1 cut(s) 45
NciI CCSGG 1 cut(s) 795
NdeII GATC 3 cut(s) 28, 229, 936
NgoMIV GCCGGC 1 cut(s) 134
NlaIII CATG 2 cut(s) 379, 928
NlaIV GGNNCC 7 cut(s) 46, 288, 289, 513, 895, 1032, 1033
NmeAIII GCCGAG 1 cut(s) 21
NspV TTCGAA 1 cut(s) 919
PaeR7I CTCGAG 1 cut(s) 487
PagI TCATGA 1 cut(s) 924
PceI AGGCCT 1 cut(s) 643
PcsI WCGNNNNNNNCGW 2 cut(s) 309, 324
PdiI GCCGGC 1 cut(s) 136
PfeI GAWTC 2 cut(s) 664, 921
PflFI GACNNNGTC 1 cut(s) 311
PkrI GCNGC 5 cut(s) 140, 248, 322, 412, 508
PleI GAGTC 3 cut(s) 446, 553, 592
PluTI GGCGCC 1 cut(s) 48
PpsI GAGTC 3 cut(s) 446, 553, 592
PpuMI RGGWCCY 1 cut(s) 1031
Psp124BI GAGCTC 1 cut(s) 630
Psp5II RGGWCCY 1 cut(s) 1031
Psp6I CCWGG 3 cut(s) 638, 667, 805
PspGI CCWGG 3 cut(s) 638, 667, 805
PspN4I GGNNCC 7 cut(s) 46, 288, 289, 513, 895, 1032, 1033
PspOMI GGGCCC 1 cut(s) 286
PspPI GGNCC 7 cut(s) 174, 286, 287, 636, 671, 689, 1031
PspPPI RGGWCCY 1 cut(s) 1031
PspXI VCTCGAGB 1 cut(s) 487
PsuI RGATCY 1 cut(s) 936
PsyI GACNNNGTC 1 cut(s) 311
RsaI GTAC 1 cut(s) 762
RsaNI GTAC 1 cut(s) 761
SacI GAGCTC 1 cut(s) 630
SaqAI TTAA 2 cut(s) 834, 986
SatI GCNGC 5 cut(s) 139, 247, 321, 411, 507
Sau3AI GATC 3 cut(s) 28, 229, 936
Sau96I GGNCC 7 cut(s) 174, 286, 287, 636, 671, 689, 1031
SchI GAGTC 3 cut(s) 446, 554, 593
ScrFI CCNGG 4 cut(s) 640, 669, 795, 807
SduI GDGCHC 4 cut(s) 290, 425, 630, 951
SfaNI GCATC 1 cut(s) 739
SfoI GGCGCC 1 cut(s) 46
Sfr274I CTCGAG 1 cut(s) 487
SfuI TTCGAA 1 cut(s) 919
SinI GGWCC 4 cut(s) 636, 671, 689, 1031
SlaI CTCGAG 1 cut(s) 487
SmlI CTYRAG 3 cut(s) 86, 116, 487
SmoI CTYRAG 3 cut(s) 86, 116, 487
Sse9I AATT 1 cut(s) 558
SseBI AGGCCT 1 cut(s) 643
SspDI GGCGCC 1 cut(s) 44
SspMI CTAG 1 cut(s) 125
SstI GAGCTC 1 cut(s) 630
StuI AGGCCT 1 cut(s) 643
StyD4I CCNGG 4 cut(s) 638, 667, 793, 805
TaaI ACNGT 2 cut(s) 862, 931
TaiI ACGT 2 cut(s) 72, 581
TaqI TCGA 4 cut(s) 351, 402, 488, 919
TaqII GACCGA 1 cut(s) 800
TasI AATT 1 cut(s) 558
TauI GCSGC 5 cut(s) 141, 249, 323, 413, 509
TfiI GAWTC 2 cut(s) 664, 921
Tru1I TTAA 2 cut(s) 834, 986
Tru9I TTAA 2 cut(s) 834, 986
TscAI CASTG 3 cut(s) 500, 867, 1012
TspDTI ATGAA 2 cut(s) 364, 840
TspRI CASTG 3 cut(s) 500, 867, 1012
Tth111I GACNNNGTC 1 cut(s) 311
VpaK11BI GGWCC 4 cut(s) 636, 671, 689, 1031
XagI CCTNNNNNAGG 2 cut(s) 684, 970
XcmI CCANNNNNNNNNTGG 2 cut(s) 713, 904
XhoI CTCGAG 1 cut(s) 487
XspI CTAG 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.