Prupe.4G015400_v2.0.a1

BAH and coiled-coil domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0001869
Physical Location & Seq
Forward (+)
721375 .. 723892
2518 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G015400.1

Sequence Viewer

Length: 651 bp
ATGGCCAAAACTAGACCGGGGAAAAGGGACGCGGATTCGTACACGATCAGAGGCACCAACAAGGTCGTCAGAGCTGGGGATTGCGTGCTGATGCGCCCATCGGACACCGGTAAGCCTCCGTACGTGGCACGCATCGAAAAGATCGAAGCTGACAACCGGGGCAACACGAAAGTGAGAGTCAGGTGGTACTATAGGCCAGAGGAGTCCATAGGAGGGCGCAGACAGTTCCATGGAGCCAAAGAGCTCTTCTTGTCTGACCACTATGATGTTCAGAGCGCTCACACCATTGAAGGCAAGTGTACGGTCCACTCTTTCAAGAGCTACACAAAGCTTGAGAATGTGGGAGCTGAAGATTATTACTGTAGATTTGAGTACAAGGCTGCTACTGGAGCGTTCACACCAGACAGAGTTGCTGTGTATTGTAAGTGTGAGATGCCATATAACCCGGATGACCTCATGGTGCAGTGCGAGGGGTGCAAAGACTGGTACCATCCTGCTTGCGTGGGCATGACTATTGTAGAAGCAAAAAAATTGGATAGCTTTCTTTGTTCAGAATGTTCATCTGAGGAGGATGTGAAAAAGCCCCAGAACGCATTTTCAGCATCACCACAAGCTGGTGCAAAGGGAGAGCTGAAGCGGCGGAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0005694 GO:0006323 GO:0006325 GO:0006333 GO:0006338 GO:0006342 GO:0006355 GO:0006996 GO:0007275 GO:0008150 GO:0009791 GO:0009845 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010639 GO:0016043 GO:0016458 GO:0017053 GO:0019219 GO:0019222 GO:0022607 GO:0031056 GO:0031057 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031399 GO:0031400 GO:0031497 GO:0031507 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0035064 GO:0035065 GO:0035067 GO:0040029 GO:0042393 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044085 GO:0044212 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070828 GO:0071103 GO:0071840 GO:0080090 GO:0090351 GO:0090568 GO:0097159 GO:0140030 GO:0140034 GO:1901363 GO:1901983 GO:1901984 GO:1902275 GO:1902679 GO:1903506 GO:1903507 GO:1905268 GO:1990837 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2000756 GO:2000757 GO:2001141 GO:2001251
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAH PHD

Protein Analysis

217

Amino Acids

24.46

Weight (kDa)

8.82

Isoelectric Point (pI)

44.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 486
AccB1I GGYRCC 2 cut(s) 53, 486
AccB7I CCANNNNNTGG 1 cut(s) 614
AccII CGCG 1 cut(s) 32
AciI CCGC 3 cut(s) 32, 637, 640
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 369
AfaI GTAC 6 cut(s) 41, 122, 188, 301, 374, 488
AfeI AGCGCT 1 cut(s) 277
AfiI CCNNNNNNNGG 2 cut(s) 213, 614
AgeI ACCGGT 1 cut(s) 107
AgsI TTSAA 2 cut(s) 290, 316
AjuI GAANNNNNNNTTGG 2 cut(s) 230, 262
AleI CACNNNNGTG 1 cut(s) 170
AluBI AGCT 9 cut(s) 74, 149, 244, 321, 331, 347, 540, 614, 631
AluI AGCT 9 cut(s) 74, 149, 244, 321, 331, 347, 540, 614, 631
Alw21I GWGCWC 1 cut(s) 246
Aor51HI AGCGCT 1 cut(s) 277
AoxI GGCC 2 cut(s) 3, 194
ApeKI GCWGC 1 cut(s) 380
AsiGI ACCGGT 1 cut(s) 107
Asp718I GGTACC 1 cut(s) 486
AspLEI GCGC 3 cut(s) 96, 219, 278
AspS9I GGNCC 1 cut(s) 304
AsuC2I CCSGG 3 cut(s) 18, 158, 446
AsuHPI GGTGA 1 cut(s) 597
AvaII GGWCC 1 cut(s) 304
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 2 cut(s) 53, 486
BanII GRGCYC 1 cut(s) 246
Bbv12I GWGCWC 1 cut(s) 246
BbvI GCAGC 1 cut(s) 367
BccI CCATC 2 cut(s) 106, 498
BcnI CCSGG 3 cut(s) 18, 158, 446
BfaI CTAG 1 cut(s) 12
BfmI CTRYAG 2 cut(s) 190, 361
BfoI RGCGCY 1 cut(s) 279
BisI GCNGC 2 cut(s) 381, 638
BlsI GCNGC 2 cut(s) 382, 639
Bme1390I CCNGG 3 cut(s) 18, 158, 446
Bme18I GGWCC 1 cut(s) 304
BmgT120I GGNCC 1 cut(s) 304
BmiI GGNNCC 3 cut(s) 55, 235, 488
BmrFI CCNGG 3 cut(s) 18, 158, 446
BmsI GCATC 4 cut(s) 81, 141, 423, 611
BpmI CTGGAG 1 cut(s) 408
BpuEI CTTGAG 1 cut(s) 353
BpuMI CCSGG 3 cut(s) 18, 158, 446
BsaAI YACGTR 1 cut(s) 124
BsaJI CCNNGG 3 cut(s) 17, 157, 229
BsaWI WCCGGW 1 cut(s) 107
Bsc4I CCNNNNNNNGG 2 cut(s) 213, 614
Bse118I RCCGGY 1 cut(s) 107
Bse1I ACTGG 2 cut(s) 391, 488
BseDI CCNNGG 3 cut(s) 17, 157, 229
BseGI GGATG 3 cut(s) 454, 490, 577
BseLI CCNNNNNNNGG 2 cut(s) 213, 614
BseMII CTCAG 1 cut(s) 555
BseNI ACTGG 2 cut(s) 391, 488
BseRI GAGGAG 2 cut(s) 215, 581
BseXI GCAGC 1 cut(s) 367
BseYI CCCAGC 1 cut(s) 74
BsgI GTGCAG 1 cut(s) 482
Bsh1236I CGCG 1 cut(s) 32
BshFI GGCC 2 cut(s) 5, 196
BshNI GGYRCC 2 cut(s) 53, 486
BshTI ACCGGT 1 cut(s) 107
BsiHKAI GWGCWC 1 cut(s) 246
BsiSI CCGG 4 cut(s) 17, 108, 157, 446
BsiWI CGTACG 1 cut(s) 120
BslFI GGGAC 1 cut(s) 41
BslI CCNNNNNNNGG 2 cut(s) 213, 614
BsmFI GGGAC 1 cut(s) 41
BsnI GGCC 2 cut(s) 5, 196
Bsp1286I GDGCHC 1 cut(s) 246
Bsp143I GATC 2 cut(s) 45, 141
Bsp19I CCATGG 1 cut(s) 229
BspACI CCGC 3 cut(s) 32, 637, 640
BspANI GGCC 2 cut(s) 5, 196
BspCNI CTCAG 1 cut(s) 556
BspFNI CGCG 1 cut(s) 32
BspLI GGNNCC 3 cut(s) 55, 235, 488
BspQI GCTCTTC 1 cut(s) 251
BspT107I GGYRCC 2 cut(s) 53, 486
BsrFI RCCGGY 1 cut(s) 107
BsrI ACTGG 2 cut(s) 391, 488
BssAI RCCGGY 1 cut(s) 107
BssECI CCNNGG 3 cut(s) 17, 157, 229
BssMI GATC 2 cut(s) 45, 141
BssT1I CCWWGG 1 cut(s) 229
Bst4CI ACNGT 3 cut(s) 225, 304, 362
Bst6I CTCTTC 1 cut(s) 251
BstBAI YACGTR 1 cut(s) 124
BstC8I GCNNGC 3 cut(s) 86, 130, 499
BstDEI CTNAG 1 cut(s) 564
BstDSI CCRYGG 1 cut(s) 229
BstF5I GGATG 3 cut(s) 454, 490, 577
BstFNI CGCG 1 cut(s) 32
BstH2I RGCGCY 1 cut(s) 279
BstHHI GCGC 3 cut(s) 96, 219, 278
BstKTI GATC 2 cut(s) 48, 144
BstMBI GATC 2 cut(s) 45, 141
BstMWI GCNNNNNNNGC 4 cut(s) 389, 474, 599, 637
BstSCI CCNGG 3 cut(s) 16, 156, 444
BstSFI CTRYAG 2 cut(s) 190, 361
BstUI CGCG 1 cut(s) 32
BstV1I GCAGC 1 cut(s) 367
BsuRI GGCC 2 cut(s) 5, 196
BtgI CCRYGG 1 cut(s) 229
BtsCI GGATG 3 cut(s) 454, 490, 577
BtsI GCAGTG 1 cut(s) 470
BtsIMutI CAGTG 1 cut(s) 470
Cac8I GCNNGC 3 cut(s) 86, 130, 499
CfoI GCGC 3 cut(s) 96, 219, 278
Cfr10I RCCGGY 1 cut(s) 107
Cfr13I GGNCC 1 cut(s) 304
CseI GACGC 1 cut(s) 38
Csp6I GTAC 6 cut(s) 40, 121, 187, 300, 373, 487
CspAI ACCGGT 1 cut(s) 107
CviAII CATG 3 cut(s) 230, 457, 508
CviQI GTAC 6 cut(s) 40, 121, 187, 300, 373, 487
DdeI CTNAG 1 cut(s) 564
DpnI GATC 2 cut(s) 47, 143
DpnII GATC 2 cut(s) 45, 141
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 251
EarI CTCTTC 1 cut(s) 251
Ecl136II GAGCTC 1 cut(s) 244
Eco130I CCWWGG 1 cut(s) 229
Eco24I GRGCYC 1 cut(s) 246
Eco47I GGWCC 1 cut(s) 304
Eco47III AGCGCT 1 cut(s) 277
Eco53kI GAGCTC 1 cut(s) 244
Eco57I CTGAAG 1 cut(s) 369
EcoICRI GAGCTC 1 cut(s) 244
EcoT14I CCWWGG 1 cut(s) 229
EcoT38I GRGCYC 1 cut(s) 246
ErhI CCWWGG 1 cut(s) 229
FaeI CATG 3 cut(s) 233, 460, 511
FaiI YATR 8 cut(s) 192, 209, 231, 264, 439, 441, 458, 509
FaqI GGGAC 1 cut(s) 41
FatI CATG 3 cut(s) 229, 456, 507
Fnu4HI GCNGC 2 cut(s) 381, 638
FokI GGATG 3 cut(s) 461, 477, 584
FriOI GRGCYC 1 cut(s) 246
Fsp4HI GCNGC 2 cut(s) 381, 638
FspBI CTAG 1 cut(s) 12
GlaI GCGC 3 cut(s) 95, 218, 277
GluI GCNGC 2 cut(s) 381, 638
GsaI CCCAGC 1 cut(s) 78
GsuI CTGGAG 1 cut(s) 408
HaeII RGCGCY 1 cut(s) 279
HaeIII GGCC 2 cut(s) 5, 196
HapII CCGG 4 cut(s) 17, 108, 157, 446
HgaI GACGC 1 cut(s) 38
HhaI GCGC 3 cut(s) 96, 219, 278
Hin1II CATG 3 cut(s) 233, 460, 511
Hin6I GCGC 3 cut(s) 94, 217, 276
HinP1I GCGC 3 cut(s) 94, 217, 276
HindIII AAGCTT 1 cut(s) 329
HinfI GANTC 3 cut(s) 35, 177, 203
HpaII CCGG 4 cut(s) 17, 108, 157, 446
HphI GGTGA 1 cut(s) 597
Hpy166II GTNNAC 4 cut(s) 42, 300, 307, 396
Hpy188I TCNGA 7 cut(s) 50, 71, 103, 256, 273, 553, 565
Hpy188III TCNNGA 1 cut(s) 316
Hpy8I GTNNAC 4 cut(s) 42, 300, 307, 396
HpyAV CCTTC 1 cut(s) 284
HpyCH4III ACNGT 3 cut(s) 225, 304, 362
HpyCH4IV ACGT 1 cut(s) 123
HpyCH4V TGCA 3 cut(s) 463, 477, 620
HpyF10VI GCNNNNNNNGC 4 cut(s) 389, 474, 599, 637
HpyF3I CTNAG 1 cut(s) 564
HpySE526I ACGT 1 cut(s) 123
Hsp92II CATG 3 cut(s) 233, 460, 511
HspAI GCGC 3 cut(s) 94, 217, 276
KpnI GGTACC 1 cut(s) 490
Kzo9I GATC 2 cut(s) 45, 141
LguI GCTCTTC 1 cut(s) 251
LmnI GCTCC 3 cut(s) 233, 344, 389
Lsp1109I GCAGC 1 cut(s) 367
LweI GCATC 4 cut(s) 81, 141, 423, 611
MaeI CTAG 1 cut(s) 12
MaeII ACGT 1 cut(s) 123
MalI GATC 2 cut(s) 47, 143
MboI GATC 2 cut(s) 45, 141
MboII GAAGA 2 cut(s) 238, 362
MhlI GDGCHC 1 cut(s) 246
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 1 cut(s) 530
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 186, 212
MnlI CCTC 8 cut(s) 44, 126, 193, 206, 463, 464, 559, 562
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MslI CAYNNNNRTG 2 cut(s) 170, 264
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 4 cut(s) 17, 108, 157, 446
MspR9I CCNGG 3 cut(s) 18, 158, 446
MvnI CGCG 1 cut(s) 32
MwoI GCNNNNNNNGC 4 cut(s) 389, 474, 599, 637
NciI CCSGG 3 cut(s) 18, 158, 446
NcoI CCATGG 1 cut(s) 229
NdeII GATC 2 cut(s) 45, 141
NlaIII CATG 3 cut(s) 233, 460, 511
NlaIV GGNNCC 3 cut(s) 55, 235, 488
OliI CACNNNNGTG 1 cut(s) 170
PciSI GCTCTTC 1 cut(s) 251
PcsI WCGNNNNNNNCGW 1 cut(s) 141
PfeI GAWTC 1 cut(s) 35
Pfl23II CGTACG 1 cut(s) 120
PflMI CCANNNNNTGG 1 cut(s) 614
PinAI ACCGGT 1 cut(s) 107
PkrI GCNGC 2 cut(s) 382, 639
PleI GAGTC 2 cut(s) 185, 211
PpsI GAGTC 2 cut(s) 185, 211
Ppu21I YACGTR 1 cut(s) 124
Psp124BI GAGCTC 1 cut(s) 246
PspFI CCCAGC 1 cut(s) 74
PspLI CGTACG 1 cut(s) 120
PspN4I GGNNCC 3 cut(s) 55, 235, 488
PspPI GGNCC 1 cut(s) 304
RsaI GTAC 6 cut(s) 41, 122, 188, 301, 374, 488
RsaNI GTAC 6 cut(s) 40, 121, 187, 300, 373, 487
RseI CAYNNNNRTG 2 cut(s) 170, 264
SacI GAGCTC 1 cut(s) 246
SapI GCTCTTC 1 cut(s) 251
SatI GCNGC 2 cut(s) 381, 638
Sau3AI GATC 2 cut(s) 45, 141
Sau96I GGNCC 1 cut(s) 304
SchI GAGTC 2 cut(s) 186, 212
ScrFI CCNGG 3 cut(s) 18, 158, 446
SduI GDGCHC 1 cut(s) 246
SfaNI GCATC 4 cut(s) 81, 141, 423, 611
SfcI CTRYAG 2 cut(s) 190, 361
SinI GGWCC 1 cut(s) 304
SmiMI CAYNNNNRTG 2 cut(s) 170, 264
SmlI CTYRAG 1 cut(s) 332
SmoI CTYRAG 1 cut(s) 332
Sse9I AATT 1 cut(s) 530
SsiI CCGC 3 cut(s) 32, 637, 640
SspMI CTAG 1 cut(s) 12
SstI GAGCTC 1 cut(s) 246
StyD4I CCNGG 3 cut(s) 16, 156, 444
StyI CCWWGG 1 cut(s) 229
TaaI ACNGT 3 cut(s) 225, 304, 362
TaiI ACGT 1 cut(s) 126
TaqI TCGA 2 cut(s) 135, 144
TasI AATT 1 cut(s) 530
TatI WGTACW 1 cut(s) 372
TauI GCSGC 1 cut(s) 640
TfiI GAWTC 1 cut(s) 35
TscAI CASTG 1 cut(s) 470
TseI GCWGC 1 cut(s) 380
TspDTI ATGAA 1 cut(s) 549
TspGWI ACGGA 1 cut(s) 108
TspRI CASTG 1 cut(s) 470
Van91I CCANNNNNTGG 1 cut(s) 614
VpaK11BI GGWCC 1 cut(s) 304
XspI CTAG 1 cut(s) 12
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.