pycom10g27630

BAH and coiled-coil domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0001869
Physical Location & Seq
Reverse (-)
28519141 .. 28520832
1692 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g27630.5

Sequence Viewer

Length: 651 bp
ATGGCCAAAACCAGACCAGGAAAAAAGGAGTCAAGGGACGCGGACTCTTACACTATCAGGGGCACCAACAAAATCGTCAGAGCTGGGGATACAGTCCTGATGCGCCCGTCGGACACCGGAAAGCCGCCATACGTGGCGCGCATCGAGAAGATCGAAGGTGAAAGCCGGGGCGGCATGAAAGTGAGAGTGAGGTGGTATTACAGGCCGGAGGAGTCGATTGGAGGGCGGAGGCAGTTCCATGGATCCAAAGAGTTGTTCTTGTCTGACCACTATGATGTGCAGAGCGCTCACACCATTGAAGGCAAGTGTACGGTGCACTCCTTCAAGAACTACACGAAGCTGGAGAATGTTGGAGCTGAGGATTACTACTGTAGATTTGAGTACAAAGCTGCTACTGGAGCGTTCTCGCCCGACCGAGTTGCTGTGTATTGCAAGTGTGAGATGCCATATAATCCGGATGACCTCATGGTGCAATGTGAGGAGTGCAAGGACTGGTACCATCCTGCTTGTGTGGGAATGACTATTGTGGAAGCAAAAAAACTGGAAAGCTTTTTGTGTTCCGAGTGTTTAGCTGAAGAGGACGAGAAAAATCCCCAGAATGCAGTTCCAGCAGCTGTTGCGGAGCTCGAGCCCAAGCGCCAGAAGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0005694 GO:0006323 GO:0006325 GO:0006333 GO:0006338 GO:0006342 GO:0006355 GO:0006996 GO:0007275 GO:0008150 GO:0009791 GO:0009845 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010639 GO:0016043 GO:0016458 GO:0017053 GO:0019219 GO:0019222 GO:0022607 GO:0031056 GO:0031057 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031399 GO:0031400 GO:0031497 GO:0031507 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0035064 GO:0035065 GO:0035067 GO:0040029 GO:0042393 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044085 GO:0044212 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070828 GO:0071103 GO:0071840 GO:0080090 GO:0090351 GO:0090568 GO:0097159 GO:0140030 GO:0140034 GO:1901363 GO:1901983 GO:1901984 GO:1902275 GO:1902679 GO:1903506 GO:1903507 GO:1905268 GO:1990837 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2000756 GO:2000757 GO:2001141 GO:2001251
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAH PHD

Protein Analysis

217

Amino Acids

24.61

Weight (kDa)

7.52

Isoelectric Point (pI)

52.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 495
AccB1I GGYRCC 2 cut(s) 62, 495
AccII CGCG 2 cut(s) 41, 139
AccIII TCCGGA 1 cut(s) 454
AciI CCGC 5 cut(s) 41, 125, 171, 226, 620
AclWI GGATC 2 cut(s) 237, 250
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 594
AfaI GTAC 3 cut(s) 310, 383, 497
AfeI AGCGCT 1 cut(s) 286
AgsI TTSAA 2 cut(s) 299, 325
AjnI CCWGG 1 cut(s) 16
AjuI GAANNNNNNNTTGG 2 cut(s) 239, 271
AluBI AGCT 8 cut(s) 83, 340, 356, 389, 549, 572, 614, 625
AluI AGCT 8 cut(s) 83, 340, 356, 389, 549, 572, 614, 625
Alw21I GWGCWC 2 cut(s) 318, 627
Alw44I GTGCAC 1 cut(s) 314
AlwI GGATC 2 cut(s) 237, 250
AlwNI CAGNNNCTG 1 cut(s) 614
Ama87I CYCGRG 1 cut(s) 626
Aor13HI TCCGGA 1 cut(s) 454
Aor51HI AGCGCT 1 cut(s) 286
AoxI GGCC 2 cut(s) 3, 203
ApaLI GTGCAC 1 cut(s) 314
ApeKI GCWGC 2 cut(s) 389, 611
Asp718I GGTACC 1 cut(s) 495
AspLEI GCGC 5 cut(s) 105, 139, 141, 287, 639
AsuC2I CCSGG 1 cut(s) 167
AsuHPI GGTGA 1 cut(s) 170
AvaI CYCGRG 1 cut(s) 626
BaeGI GKGCMC 2 cut(s) 65, 318
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 242
BanI GGYRCC 2 cut(s) 62, 495
BanII GRGCYC 2 cut(s) 627, 633
Bbv12I GWGCWC 2 cut(s) 318, 627
BbvCI CCTCAGC 1 cut(s) 357
BbvI GCAGC 2 cut(s) 376, 623
BccI CCATC 1 cut(s) 507
BcgI CGANNNNNNTGC 2 cut(s) 401, 435
BciT130I CCWGG 1 cut(s) 18
BciVI GTATCC 1 cut(s) 82
BcnI CCSGG 1 cut(s) 167
BfmI CTRYAG 1 cut(s) 370
BfoI RGCGCY 2 cut(s) 288, 640
BfuI GTATCC 1 cut(s) 82
BglI GCCNNNNNGGC 1 cut(s) 171
BisI GCNGC 4 cut(s) 125, 172, 390, 612
BlsI GCNGC 4 cut(s) 126, 173, 391, 613
Bme1390I CCNGG 2 cut(s) 18, 167
BmeT110I CYCGRG 1 cut(s) 626
BmiI GGNNCC 3 cut(s) 64, 244, 497
BmrFI CCNGG 2 cut(s) 18, 167
BmsI GCATC 3 cut(s) 90, 150, 432
BpmI CTGGAG 2 cut(s) 362, 417
Bpu10I CCTNAGC 1 cut(s) 357
BpuMI CCSGG 1 cut(s) 167
BsaAI YACGTR 1 cut(s) 133
BsaJI CCNNGG 2 cut(s) 166, 238
BsaWI WCCGGW 2 cut(s) 116, 454
Bse1I ACTGG 3 cut(s) 400, 497, 546
Bse3DI GCAATG 1 cut(s) 479
BseAI TCCGGA 1 cut(s) 454
BseBI CCWGG 1 cut(s) 18
BseDI CCNNGG 2 cut(s) 166, 238
BseGI GGATG 2 cut(s) 463, 499
BseMI GCAATG 1 cut(s) 479
BseMII CTCAG 1 cut(s) 348
BseNI ACTGG 3 cut(s) 400, 497, 546
BsePI GCGCGC 1 cut(s) 137
BseRI GAGGAG 2 cut(s) 224, 494
BseSI GKGCMC 2 cut(s) 65, 318
BseXI GCAGC 2 cut(s) 376, 623
BseYI CCCAGC 1 cut(s) 83
BsgI GTGCAG 1 cut(s) 299
Bsh1236I CGCG 2 cut(s) 41, 139
Bsh1285I CGRYCG 1 cut(s) 415
BshFI GGCC 2 cut(s) 5, 205
BshNI GGYRCC 2 cut(s) 62, 495
BsiEI CGRYCG 1 cut(s) 415
BsiHKAI GWGCWC 2 cut(s) 318, 627
BsiHKCI CYCGRG 1 cut(s) 626
BsiSI CCGG 4 cut(s) 117, 166, 206, 455
BslFI GGGAC 1 cut(s) 50
BsmFI GGGAC 1 cut(s) 50
BsmI GAATGC 1 cut(s) 604
BsnI GGCC 2 cut(s) 5, 205
BsoBI CYCGRG 1 cut(s) 626
Bsp1286I GDGCHC 4 cut(s) 65, 318, 627, 633
Bsp13I TCCGGA 1 cut(s) 454
Bsp143I GATC 2 cut(s) 150, 242
Bsp19I CCATGG 1 cut(s) 238
BspACI CCGC 5 cut(s) 41, 125, 171, 226, 620
BspANI GGCC 2 cut(s) 5, 205
BspCNI CTCAG 1 cut(s) 349
BspEI TCCGGA 1 cut(s) 454
BspFNI CGCG 2 cut(s) 41, 139
BspLI GGNNCC 3 cut(s) 64, 244, 497
BspPI GGATC 2 cut(s) 237, 250
BspT107I GGYRCC 2 cut(s) 62, 495
BsrDI GCAATG 1 cut(s) 479
BsrI ACTGG 3 cut(s) 400, 497, 546
BssECI CCNNGG 2 cut(s) 166, 238
BssHII GCGCGC 1 cut(s) 137
BssMI GATC 2 cut(s) 150, 242
BssT1I CCWWGG 1 cut(s) 238
Bst2UI CCWGG 1 cut(s) 18
Bst4CI ACNGT 3 cut(s) 94, 313, 371
Bst6I CTCTTC 1 cut(s) 570
BstAPI GCANNNNNTGC 1 cut(s) 617
BstBAI YACGTR 1 cut(s) 133
BstC8I GCNNGC 1 cut(s) 139
BstDEI CTNAG 1 cut(s) 357
BstDSI CCRYGG 1 cut(s) 238
BstF5I GGATG 2 cut(s) 463, 499
BstFNI CGCG 2 cut(s) 41, 139
BstH2I RGCGCY 2 cut(s) 288, 640
BstHHI GCGC 5 cut(s) 105, 139, 141, 287, 639
BstKTI GATC 2 cut(s) 153, 245
BstMBI GATC 2 cut(s) 150, 242
BstMCI CGRYCG 1 cut(s) 415
BstMWI GCNNNNNNNGC 4 cut(s) 171, 398, 608, 617
BstNI CCWGG 1 cut(s) 18
BstSCI CCNGG 2 cut(s) 16, 165
BstSFI CTRYAG 1 cut(s) 370
BstSLI GKGCMC 2 cut(s) 65, 318
BstUI CGCG 2 cut(s) 41, 139
BstV1I GCAGC 2 cut(s) 376, 623
BstX2I RGATCY 1 cut(s) 242
BstYI RGATCY 1 cut(s) 242
BsuI GTATCC 1 cut(s) 82
BsuRI GGCC 2 cut(s) 5, 205
BtgI CCRYGG 1 cut(s) 238
BtsCI GGATG 2 cut(s) 463, 499
Cac8I GCNNGC 1 cut(s) 139
CaiI CAGNNNCTG 1 cut(s) 614
CfoI GCGC 5 cut(s) 105, 139, 141, 287, 639
CseI GACGC 1 cut(s) 47
Csp6I GTAC 3 cut(s) 309, 382, 496
CviAII CATG 3 cut(s) 175, 239, 466
CviQI GTAC 3 cut(s) 309, 382, 496
DdeI CTNAG 1 cut(s) 357
DpnI GATC 2 cut(s) 152, 244
DpnII GATC 2 cut(s) 150, 242
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 570
EarI CTCTTC 1 cut(s) 570
EciI GGCGGA 1 cut(s) 241
Ecl136II GAGCTC 1 cut(s) 625
Eco130I CCWWGG 1 cut(s) 238
Eco24I GRGCYC 2 cut(s) 627, 633
Eco47III AGCGCT 1 cut(s) 286
Eco53kI GAGCTC 1 cut(s) 625
Eco57I CTGAAG 1 cut(s) 594
Eco88I CYCGRG 1 cut(s) 626
EcoICRI GAGCTC 1 cut(s) 625
EcoRII CCWGG 1 cut(s) 16
EcoT14I CCWWGG 1 cut(s) 238
EcoT38I GRGCYC 2 cut(s) 627, 633
ErhI CCWWGG 1 cut(s) 238
FaeI CATG 3 cut(s) 178, 242, 469
FaiI YATR 7 cut(s) 130, 176, 240, 273, 448, 450, 467
FaqI GGGAC 1 cut(s) 50
FatI CATG 3 cut(s) 174, 238, 465
Fnu4HI GCNGC 4 cut(s) 125, 172, 390, 612
FokI GGATG 2 cut(s) 470, 486
FriOI GRGCYC 2 cut(s) 627, 633
Fsp4HI GCNGC 4 cut(s) 125, 172, 390, 612
GlaI GCGC 5 cut(s) 104, 138, 140, 286, 638
GluI GCNGC 4 cut(s) 125, 172, 390, 612
GsaI CCCAGC 1 cut(s) 87
GsuI CTGGAG 2 cut(s) 362, 417
HaeII RGCGCY 2 cut(s) 288, 640
HaeIII GGCC 2 cut(s) 5, 205
HapII CCGG 4 cut(s) 117, 166, 206, 455
HgaI GACGC 1 cut(s) 47
HhaI GCGC 5 cut(s) 105, 139, 141, 287, 639
Hin1II CATG 3 cut(s) 178, 242, 469
Hin6I GCGC 5 cut(s) 103, 137, 139, 285, 637
HinP1I GCGC 5 cut(s) 103, 137, 139, 285, 637
HindIII AAGCTT 1 cut(s) 547
HinfI GANTC 3 cut(s) 29, 44, 212
HpaII CCGG 4 cut(s) 117, 166, 206, 455
HphI GGTGA 1 cut(s) 170
Hpy166II GTNNAC 2 cut(s) 309, 316
Hpy188I TCNGA 4 cut(s) 80, 112, 265, 562
Hpy188III TCNNGA 4 cut(s) 97, 145, 325, 455
Hpy8I GTNNAC 2 cut(s) 309, 316
Hpy99I CGWCG 1 cut(s) 112
HpyAV CCTTC 3 cut(s) 149, 293, 331
HpyCH4III ACNGT 3 cut(s) 94, 313, 371
HpyCH4IV ACGT 1 cut(s) 132
HpyCH4V TGCA 6 cut(s) 280, 316, 432, 472, 486, 602
HpyF10VI GCNNNNNNNGC 4 cut(s) 171, 398, 608, 617
HpyF3I CTNAG 1 cut(s) 357
HpySE526I ACGT 1 cut(s) 132
Hsp92II CATG 3 cut(s) 178, 242, 469
HspAI GCGC 5 cut(s) 103, 137, 139, 285, 637
Kpn2I TCCGGA 1 cut(s) 454
KpnI GGTACC 1 cut(s) 499
Kzo9I GATC 2 cut(s) 150, 242
LmnI GCTCC 3 cut(s) 353, 398, 622
Lsp1109I GCAGC 2 cut(s) 376, 623
LweI GCATC 3 cut(s) 90, 150, 432
MaeII ACGT 1 cut(s) 132
MalI GATC 2 cut(s) 152, 244
MboI GATC 2 cut(s) 150, 242
MboII GAAGA 2 cut(s) 160, 587
MflI RGATCY 1 cut(s) 242
MhlI GDGCHC 4 cut(s) 65, 318, 627, 633
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 3 cut(s) 38, 38, 221
MmeI TCCRAC 2 cut(s) 90, 331
MnlI CCTC 8 cut(s) 183, 202, 215, 222, 352, 472, 473, 571
Mox20I TGGCCA 1 cut(s) 5
MroI TCCGGA 1 cut(s) 454
MscI TGGCCA 1 cut(s) 5
MslI CAYNNNNRTG 2 cut(s) 179, 273
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 614
MspI CCGG 4 cut(s) 117, 166, 206, 455
MspR9I CCNGG 2 cut(s) 18, 167
Mva1269I GAATGC 1 cut(s) 604
MvaI CCWGG 1 cut(s) 18
MvnI CGCG 2 cut(s) 41, 139
MwoI GCNNNNNNNGC 4 cut(s) 171, 398, 608, 617
NciI CCSGG 1 cut(s) 167
NcoI CCATGG 1 cut(s) 238
NdeII GATC 2 cut(s) 150, 242
NlaIII CATG 3 cut(s) 178, 242, 469
NlaIV GGNNCC 3 cut(s) 64, 244, 497
PaeR7I CTCGAG 1 cut(s) 626
PauI GCGCGC 1 cut(s) 137
PcsI WCGNNNNNNNCGW 1 cut(s) 150
PctI GAATGC 1 cut(s) 604
PkrI GCNGC 4 cut(s) 126, 173, 391, 613
PleI GAGTC 3 cut(s) 37, 38, 220
PpsI GAGTC 3 cut(s) 37, 38, 220
Ppu21I YACGTR 1 cut(s) 133
Psp124BI GAGCTC 1 cut(s) 627
Psp6I CCWGG 1 cut(s) 16
PspFI CCCAGC 1 cut(s) 83
PspGI CCWGG 1 cut(s) 16
PspN4I GGNNCC 3 cut(s) 64, 244, 497
PspXI VCTCGAGB 1 cut(s) 626
PstNI CAGNNNCTG 1 cut(s) 614
PsuI RGATCY 1 cut(s) 242
PteI GCGCGC 1 cut(s) 137
PvuII CAGCTG 1 cut(s) 614
RsaI GTAC 3 cut(s) 310, 383, 497
RsaNI GTAC 3 cut(s) 309, 382, 496
RseI CAYNNNNRTG 2 cut(s) 179, 273
SacI GAGCTC 1 cut(s) 627
SatI GCNGC 4 cut(s) 125, 172, 390, 612
Sau3AI GATC 2 cut(s) 150, 242
SchI GAGTC 3 cut(s) 38, 38, 221
ScrFI CCNGG 2 cut(s) 18, 167
SduI GDGCHC 4 cut(s) 65, 318, 627, 633
SfaNI GCATC 3 cut(s) 90, 150, 432
SfcI CTRYAG 1 cut(s) 370
Sfr274I CTCGAG 1 cut(s) 626
SlaI CTCGAG 1 cut(s) 626
SmiMI CAYNNNNRTG 2 cut(s) 179, 273
SmlI CTYRAG 1 cut(s) 626
SmoI CTYRAG 1 cut(s) 626
SsiI CCGC 5 cut(s) 41, 125, 171, 226, 620
SstI GAGCTC 1 cut(s) 627
StyD4I CCNGG 2 cut(s) 16, 165
StyI CCWWGG 1 cut(s) 238
TaaI ACNGT 3 cut(s) 94, 313, 371
TaiI ACGT 1 cut(s) 135
TaqI TCGA 4 cut(s) 144, 153, 215, 627
TaqII GACCGA 1 cut(s) 429
TatI WGTACW 1 cut(s) 381
TauI GCSGC 2 cut(s) 127, 174
TseI GCWGC 2 cut(s) 389, 611
TspDTI ATGAA 1 cut(s) 191
VneI GTGCAC 1 cut(s) 314
XhoI CTCGAG 1 cut(s) 626
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.