Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001869

Physical Location & Seq

Genomic Coordinates Reverse (-)

59967318 .. 59971834

Gene Structure 4517 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0468900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

ATGGCTTCTTCTTCTTCTTCTTCTTCTCTCAAAGCCATCTCCACCTTCACCACCCCTTCAAAAACACCACCACCTCCCTCATCATCATCATCAAAAGCTTCACTTCTCTCCTTCCTCAACAACACCTCCTCTCCAATCTCCCTAAAACTTTCTCACTCCATTCCTCGTTCACATTTTCGTGGAAGCCATTCCACTCTATCTCTCGCAGTCACCAATGCTTTGAACACCGTACAGTCTTCCTCTCCGGTGTCCACCTCCGGAGATCGAACAAAGTTGCCCTCCTCCGACGCCAAGCCTACGATCCTGGTCTCCGAGAAACTTGGAGAGGCGGGCCTGGATGTCCTACGCAAGTTCGGGAACCTGGAGTGCGCGTACAACCTCACGCCGGAGGAGCTCTGCGCCAAGATCTCAGTCTGCGACGCCCTGATCGTCCGGAGCGGGACGAAGGTCAACAGGCAGGTTTTCGAGGCGTCGAAGGGGAGGCTGAAGGTGGTGGGAAGGGCAGGGGTTGGAATAGACAATGTGGATCTGCAGGCGGCGACGGAGTTTGGATGCCTCGTCGTTAATGCGCCGACGGCAAACACCGTCGCCGCCGCAGAGCACGGGATCGCTCTGCTCACTTCCATGGCTAGAAATGTTGCTCAGGCAGATGCCTCCATGAAAGCTGGACTATGGAAACGCAACAAGTATGTCGGTGTCTCTCTTGTTGGGAAGACATTAGCAGTAATGGGATTTGGAAAAGTTGGATCAGAAGTTGCTAGACGTGCAAAAGGCTTGGGAATGCATGTTATAGCACATGATCCATATGCCCCAGCTGACAGAGCCCGTGCCGTTGGTGTGGATTTGGTCTCTTTCGACCAGGCCATCTCCACTGCAGATTTCGTGTCTCTGCATATGCCACTTACCCCTACTACATCAAAGGTGTTTAATGATGATACGTTTTCAAAGATGAAGAAGGGTGTTCGCATCATTAATGTTGCAAGGGGTGGAGTCATTGATGAAGATGCATTAGTGAGAGCCCTTGATAGCGGAGTTGTAGCTCAGGCTGCACTTGATGTGTTCACAGAGGAGCCTCCATCAAAAGAAAGCAAGTTAGTGCAACATGAGAATGTCACAGTCACACCTCATCTCGGAGCTAGCACAAAGGAAGCACAGGAAGGTGTAGCAATTGAAATAGCCGAGGCAGTAGTTGGAGCATTGCAAGGTGAACTTTCCACAACTGCTGTCAATGCACCCATGGTTCCTCCTGAGGTTATGTTCGAGCTGTCTCCTTATGTTGTTCTTGCTGAGAAGCTGGGAAAGTTAGCTGTACAATTAGTAGCAGGAGGGAGTGGAATTACATCTGTGAGGGTGGTGTACAAATCAGCTCGAGATTCTGATGACTTGGATACTAGACTTCTCCGGGCTATGATCACTAAAGGCATCATTGAACCGATATCTACCTCATTCATCAATCTAGTAAATGCTGATTATGTTGCCAAGCAGAAAGGTCTGCGCATAAGTGAGGAAAAGGTGTCTGTTGACTCATCTCCCGAGTTCCCTGTTGACTCAATCCAGGTGCACATATCCAATGTGGACTCCAAATTTGCAAGTTCCGTTTCTGATAATGGAAGCATAAGCATTGAGGGGAAAGTGAAATATGGGGAACCCCATCTCACATGTTTGGGTTCGTTTGGCGTGGACGTGAGCCTTGAAGGGAACCTTATTTTGTGCCGGCAGGTGGATCAACCCGGAATGATTGGCAAGGTGGGAAATATTCTTGGGAGCCAGAATGTGAATGTGAGCTTTATGAGTGTGGGAAGAACCATCCTGAAGAAAGCCATAATGGCTATTGGTGTAGATGAGGAACCAAACAAGGAGACTTTGAAGAAAATTGGGGATGTGGCTGCTATTGAAGAGTTTGTGTTCCTTAAGCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0005694 GO:0006323 GO:0006325 GO:0006333 GO:0006338 GO:0006342 GO:0006355 GO:0006996 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016458 GO:0017053 GO:0019219 GO:0019222 GO:0022607 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031497 GO:0031507 GO:0031974 GO:0031981 GO:0032991 GO:0040029 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044085 GO:0044212 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070828 GO:0071103 GO:0071840 GO:0080090 GO:0090568 GO:0097159 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAH PHD

Protein Analysis

639

Amino Acids

67.3

Weight (kDa)

7.63

Isoelectric Point (pI)

38.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
2-Hacid_dh	PF00389	101 - 410	8.2e-34	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2-Hacid_dh_C	PF02826	203 - 378	5.6e-63	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PGDH_inter	PF19304	422 - 525	8.5e-14	D-3-phosphoglycerate dehydrogenase intervening domain
ACT	PF01842	569 - 628	2.3e-09	ACT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001869)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04260 AT4G22140 AT4G22140 AT4G22140
fragaria_vesca	FvH4_3g01411 FvH4_6g42580
malus_domestica	MD05G1352300.v1.1 MD09G1112400.v1.1 MD10G1326300.v1.1 MD11G1102600.v1.1 MD11G1102700.v1.1 MD17G1102500.v1.1
prunus_persica	Prupe.3G212300_v2.0.a1 Prupe.3G212300_v2.0.a1 Prupe.3G212300_v2.0.a1 Prupe.3G212300_v2.0.a1 Prupe.4G015400_v2.0.a1
pyrus_communis	pycom05g31920 pycom10g27630 pycom17g09690
rosa_chinensis	RchiOBHm_Chr2g0158431 RchiOBHm_Chr5g0002141
rosa_laevigata	RLG00000021087 RLG00000026695 RLG00000031000
rosa_multiflora	Rmu_sc0004855.1_g000006 Rmu_ssc0000001.1_g000006
rosa_roxburghii	Rroxscaffold_1G00024330 Rroxscaffold_1G00073770 Rroxscaffold_2G00091380
rosa_rugosa	Rorug02G0468700 Rorug02G0468800 Rorug02G0468900 Rorug04G0394600
rosa_samantha	Rh2AG534800 Rh2BG548200 Rh2CG518600 Rh2DG557800 Rh5AG016400 Rh5BG019900 Rh5CG017700 Rh5CG364100 Rh5CG364200 Rh5DG017900
rosa_wichuraiana	Rw2G044290 Rw5G001600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1708
Acc16I	TGCGCA	1 cut(s)	1496
Acc36I	ACCTGC	2 cut(s)	448, 1708
AccBSI	CCGCTC	1 cut(s)	438
AccII	CGCG	1 cut(s)	371
AccIII	TCCGGA	2 cut(s)	257, 432
AciI	CCGC	6 cut(s)	329, 438, 536, 591, 594, 1029
AclWI	GGATC	6 cut(s)	295, 534, 614, 754, 794, 1731
AcsI	RAATTY	1 cut(s)	1583
AcuI	CTGAAG	2 cut(s)	506, 1832
AcyI	GRCGYC	3 cut(s)	288, 420, 470
AfaI	GTAC	4 cut(s)	231, 374, 1311, 1358
AfiI	CCNNNNNNNGG	3 cut(s)	385, 1130, 1720
AflII	CTTAAG	1 cut(s)	1910
AflIII	ACRYGT	1 cut(s)	1658
AgsI	TTSAA	8 cut(s)	60, 223, 945, 1172, 1430, 1694, 1867, 1895
AjiI	CACGTC	2 cut(s)	764, 1684
AjnI	CCWGG	5 cut(s)	303, 333, 360, 858, 1554
Alw21I	GWGCWC	3 cut(s)	396, 603, 1563
Alw26I	GTCTC	6 cut(s)	313, 703, 853, 891, 1272, 1853
Alw44I	GTGCAC	1 cut(s)	1559
AlwI	GGATC	6 cut(s)	295, 534, 614, 754, 794, 1731
Ama87I	CYCGRG	2 cut(s)	1368, 1532
Aor13HI	TCCGGA	2 cut(s)	257, 432
AoxI	GGCC	2 cut(s)	331, 861
ApaLI	GTGCAC	1 cut(s)	1559
ApeKI	GCWGC	2 cut(s)	1046, 1886
ApoI	RAATTY	1 cut(s)	1583
ArsI	GACNNNNNNTTYG	2 cut(s)	1568, 1600
AseI	ATTAAT	1 cut(s)	972
Asp700I	GAANNNNTTC	1 cut(s)	187
AspLEI	GCGC	4 cut(s)	371, 401, 571, 1497
AspS9I	GGNCC	1 cut(s)	331
AsuC2I	CCSGG	2 cut(s)	1403, 1731
AsuHPI	GGTGA	3 cut(s)	40, 202, 1217
AsuNHI	GCTAGC	1 cut(s)	1136
AvaI	CYCGRG	2 cut(s)	1368, 1532
AxyI	CCTNAGG	1 cut(s)	1248
BaeGI	GKGCMC	1 cut(s)	1563
BanII	GRGCYC	3 cut(s)	396, 826, 1021
BbsI	GAAGAC	2 cut(s)	228, 719
Bbv12I	GWGCWC	3 cut(s)	396, 603, 1563
BbvI	GCAGC	2 cut(s)	1033, 1873
BccI	CCATC	5 cut(s)	44, 872, 1084, 1659, 1814
BceAI	ACGGC	2 cut(s)	591, 815
BciT130I	CCWGG	5 cut(s)	305, 335, 362, 860, 1556
BciVI	GTATCC	1 cut(s)	1381
BclI	TGATCA	1 cut(s)	1410
BcnI	CCSGG	2 cut(s)	1403, 1731
BcoDI	GTCTC	6 cut(s)	313, 703, 853, 891, 1272, 1853
BfaI	CTAG	5 cut(s)	630, 759, 1137, 1392, 1457
BfmI	CTRYAG	3 cut(s)	530, 873, 1916
BfrI	CTTAAG	1 cut(s)	1910
BfuAI	ACCTGC	2 cut(s)	448, 1708
BfuI	GTATCC	1 cut(s)	1381
BglI	GCCNNNNNGGC	1 cut(s)	1826
BglII	AGATCT	1 cut(s)	405
BisI	GCNGC	5 cut(s)	537, 591, 594, 1047, 1887
BlsI	GCNGC	5 cut(s)	538, 592, 595, 1048, 1888
Bme1390I	CCNGG	7 cut(s)	305, 335, 362, 860, 1403, 1556, 1731
BmeT110I	CYCGRG	2 cut(s)	1368, 1532
BmgBI	CACGTC	2 cut(s)	764, 1684
BmgT120I	GGNCC	1 cut(s)	331
BmiI	GGNNCC	7 cut(s)	359, 1071, 1242, 1647, 1700, 1766, 1848
BmrFI	CCNGG	7 cut(s)	305, 335, 362, 860, 1403, 1556, 1731
BmsI	GCATC	5 cut(s)	542, 640, 975, 994, 1431
BmtI	GCTAGC	1 cut(s)	1140
BoxI	GACNNNNGTC	1 cut(s)	446
BpiI	GAAGAC	2 cut(s)	228, 719
BpmI	CTGGAG	1 cut(s)	383
Bpu10I	CCTNAGC	2 cut(s)	642, 1041
BpuMI	CCSGG	2 cut(s)	1403, 1731
BsaHI	GRCGYC	3 cut(s)	288, 420, 470
BsaI	GGTCTC	2 cut(s)	313, 853
BsaJI	CCNNGG	3 cut(s)	624, 1179, 1236
BsaWI	WCCGGW	3 cut(s)	244, 257, 432
BsaXI	ACNNNNNCTCC	6 cut(s)	110, 115, 140, 145, 356, 386
Bsc4I	CCNNNNNNNGG	3 cut(s)	385, 1130, 1720
Bse118I	RCCGGY	1 cut(s)	1713
Bse21I	CCTNAGG	1 cut(s)	1248
Bse3DI	GCAATG	1 cut(s)	1196
BseAI	TCCGGA	2 cut(s)	257, 432
BseBI	CCWGG	5 cut(s)	305, 335, 362, 860, 1556
BseDI	CCNNGG	3 cut(s)	624, 1179, 1236
BseGI	GGATG	4 cut(s)	343, 557, 1806, 1885
BseLI	CCNNNNNNNGG	3 cut(s)	385, 1130, 1720
BseMI	GCAATG	1 cut(s)	1196
BseMII	CTCAG	5 cut(s)	423, 656, 1055, 1239, 1278
BseRI	GAGGAG	4 cut(s)	118, 271, 404, 1082
BseSI	GKGCMC	1 cut(s)	1563
BseXI	GCAGC	2 cut(s)	1033, 1873
BseYI	CCCAGC	2 cut(s)	811, 1294
BsgI	GTGCAG	1 cut(s)	1032
Bsh1236I	CGCG	1 cut(s)	371
BshFI	GGCC	2 cut(s)	333, 863
BsiHKAI	GWGCWC	3 cut(s)	396, 603, 1563
BsiHKCI	CYCGRG	2 cut(s)	1368, 1532
BsiSI	CCGG	7 cut(s)	245, 258, 386, 433, 1402, 1714, 1731
BslFI	GGGAC	1 cut(s)	454
BslI	CCNNNNNNNGG	3 cut(s)	385, 1130, 1720
BsmAI	GTCTC	6 cut(s)	313, 703, 853, 891, 1272, 1853
BsmFI	GGGAC	1 cut(s)	454
BsmI	GAATGC	1 cut(s)	786
BsnI	GGCC	2 cut(s)	333, 863
Bso31I	GGTCTC	2 cut(s)	313, 853
BsoBI	CYCGRG	2 cut(s)	1368, 1532
Bsp1286I	GDGCHC	5 cut(s)	396, 603, 826, 1021, 1563
Bsp13I	TCCGGA	2 cut(s)	257, 432
Bsp1407I	TGTACA	2 cut(s)	1309, 1356
Bsp19I	CCATGG	2 cut(s)	624, 1236
BspACI	CCGC	6 cut(s)	329, 438, 536, 591, 594, 1029
BspANI	GGCC	2 cut(s)	333, 863
BspCNI	CTCAG	5 cut(s)	422, 655, 1054, 1240, 1279
BspEI	TCCGGA	2 cut(s)	257, 432
BspFNI	CGCG	1 cut(s)	371
BspLI	GGNNCC	7 cut(s)	359, 1071, 1242, 1647, 1700, 1766, 1848
BspMAI	CTGCAG	2 cut(s)	534, 877
BspMI	ACCTGC	2 cut(s)	448, 1708
BspOI	GCTAGC	1 cut(s)	1140
BspPI	GGATC	6 cut(s)	295, 534, 614, 754, 794, 1731
BspTI	CTTAAG	1 cut(s)	1910
BspTNI	GGTCTC	2 cut(s)	313, 853
BsrBI	CCGCTC	1 cut(s)	438
BsrDI	GCAATG	1 cut(s)	1196
BsrFI	RCCGGY	1 cut(s)	1713
BsrGI	TGTACA	2 cut(s)	1309, 1356
BssAI	RCCGGY	1 cut(s)	1713
BssECI	CCNNGG	3 cut(s)	624, 1179, 1236
BssNI	GRCGYC	3 cut(s)	288, 420, 470
BssT1I	CCWWGG	2 cut(s)	624, 1236
Bst2UI	CCWGG	5 cut(s)	305, 335, 362, 860, 1556
Bst4CI	ACNGT	4 cut(s)	229, 234, 586, 1117
Bst6I	CTCTTC	1 cut(s)	1890
BstACI	GRCGYC	3 cut(s)	288, 420, 470
BstAFI	CTTAAG	1 cut(s)	1910
BstAUI	TGTACA	2 cut(s)	1309, 1356
BstC8I	GCNNGC	4 cut(s)	331, 534, 1138, 1715
BstDEI	CTNAG	5 cut(s)	409, 642, 1041, 1248, 1287
BstDSI	CCRYGG	2 cut(s)	624, 1236
BstF5I	GGATG	4 cut(s)	343, 557, 1806, 1885
BstFNI	CGCG	1 cut(s)	371
BstHHI	GCGC	4 cut(s)	371, 401, 571, 1497
BstMAI	GTCTC	6 cut(s)	313, 703, 853, 891, 1272, 1853
BstMWI	GCNNNNNNNGC	7 cut(s)	391, 575, 764, 821, 1046, 1229, 1826
BstNI	CCWGG	5 cut(s)	305, 335, 362, 860, 1556
BstNSI	RCATGY	2 cut(s)	788, 1662
BstPAI	GACNNNNGTC	1 cut(s)	446
BstSCI	CCNGG	7 cut(s)	303, 333, 360, 858, 1401, 1554, 1729
BstSFI	CTRYAG	3 cut(s)	530, 873, 1916
BstSLI	GKGCMC	1 cut(s)	1563
BstUI	CGCG	1 cut(s)	371
BstV1I	GCAGC	2 cut(s)	1033, 1873
BstV2I	GAAGAC	2 cut(s)	228, 719
BstX2I	RGATCY	2 cut(s)	405, 526
BstYI	RGATCY	2 cut(s)	405, 526
Bsu36I	CCTNAGG	1 cut(s)	1248
BsuI	GTATCC	1 cut(s)	1381
BsuRI	GGCC	2 cut(s)	333, 863
BtgI	CCRYGG	2 cut(s)	624, 1236
BtrI	CACGTC	2 cut(s)	764, 1684
BtsCI	GGATG	4 cut(s)	343, 557, 1806, 1885
BtsI	GCAGTG	1 cut(s)	870
BtsIMutI	CAGTG	1 cut(s)	870
BveI	ACCTGC	2 cut(s)	448, 1708
Cac8I	GCNNGC	4 cut(s)	331, 534, 1138, 1715
CfoI	GCGC	4 cut(s)	371, 401, 571, 1497
Cfr10I	RCCGGY	1 cut(s)	1713
Cfr13I	GGNCC	1 cut(s)	331
CseI	GACGC	3 cut(s)	296, 428, 459
Csp6I	GTAC	4 cut(s)	230, 373, 1310, 1357
CviAII	CATG	7 cut(s)	625, 658, 785, 797, 1103, 1237, 1659
CviQI	GTAC	4 cut(s)	230, 373, 1310, 1357
DdeI	CTNAG	5 cut(s)	409, 642, 1041, 1248, 1287
Eam1104I	CTCTTC	1 cut(s)	1890
EarI	CTCTTC	1 cut(s)	1890
Ecl136II	GAGCTC	1 cut(s)	394
Eco130I	CCWWGG	2 cut(s)	624, 1236
Eco24I	GRGCYC	3 cut(s)	396, 826, 1021
Eco31I	GGTCTC	2 cut(s)	313, 853
Eco32I	GATATC	1 cut(s)	1437
Eco53kI	GAGCTC	1 cut(s)	394
Eco57I	CTGAAG	2 cut(s)	506, 1832
Eco81I	CCTNAGG	1 cut(s)	1248
Eco88I	CYCGRG	2 cut(s)	1368, 1532
EcoICRI	GAGCTC	1 cut(s)	394
EcoRII	CCWGG	5 cut(s)	303, 333, 360, 858, 1554
EcoRV	GATATC	1 cut(s)	1437
EcoT14I	CCWWGG	2 cut(s)	624, 1236
EcoT22I	ATGCAT	2 cut(s)	786, 1009
EcoT38I	GRGCYC	3 cut(s)	396, 826, 1021
ErhI	CCWWGG	2 cut(s)	624, 1236
FaeI	CATG	7 cut(s)	628, 661, 788, 800, 1106, 1240, 1662
FalI	AAGNNNNNCTT	6 cut(s)	87, 119, 1194, 1226, 1686, 1718
FaqI	GGGAC	1 cut(s)	454
FatI	CATG	7 cut(s)	624, 657, 784, 796, 1102, 1236, 1658
FauI	CCCGC	2 cut(s)	322, 431
FauNDI	CATATG	2 cut(s)	805, 894
FbaI	TGATCA	1 cut(s)	1410
Fnu4HI	GCNGC	5 cut(s)	537, 591, 594, 1047, 1887
FokI	GGATG	4 cut(s)	350, 564, 1793, 1892
FriOI	GRGCYC	3 cut(s)	396, 826, 1021
Fsp4HI	GCNGC	5 cut(s)	537, 591, 594, 1047, 1887
FspBI	CTAG	5 cut(s)	630, 759, 1137, 1392, 1457
FspI	TGCGCA	1 cut(s)	1496
GlaI	GCGC	4 cut(s)	370, 400, 570, 1496
GluI	GCNGC	5 cut(s)	537, 591, 594, 1047, 1887
GsaI	CCCAGC	2 cut(s)	815, 1298
GsuI	CTGGAG	1 cut(s)	383
HaeIII	GGCC	2 cut(s)	333, 863
HapII	CCGG	7 cut(s)	245, 258, 386, 433, 1402, 1714, 1731
HgaI	GACGC	3 cut(s)	296, 428, 459
HhaI	GCGC	4 cut(s)	371, 401, 571, 1497
Hin1I	GRCGYC	3 cut(s)	288, 420, 470
Hin1II	CATG	7 cut(s)	628, 661, 788, 800, 1106, 1240, 1662
Hin6I	GCGC	4 cut(s)	369, 399, 569, 1495
HinP1I	GCGC	4 cut(s)	369, 399, 569, 1495
HincII	GTYRAC	3 cut(s)	451, 1522, 1546
HindII	GTYRAC	3 cut(s)	451, 1522, 1546
HindIII	AAGCTT	1 cut(s)	96
HinfI	GANTC	5 cut(s)	990, 1373, 1523, 1547, 1577
HpaII	CCGG	7 cut(s)	245, 258, 386, 433, 1402, 1714, 1731
HphI	GGTGA	3 cut(s)	40, 202, 1217
Hpy188I	TCNGA	6 cut(s)	286, 313, 751, 1133, 1378, 1603
Hpy188III	TCNNGA	7 cut(s)	258, 355, 433, 1247, 1370, 1532, 1810
Hpy99I	CGWCG	7 cut(s)	290, 422, 475, 544, 563, 577, 590
HpyCH4III	ACNGT	4 cut(s)	229, 234, 586, 1117
HpyCH4IV	ACGT	3 cut(s)	763, 938, 1683
HpyF10VI	GCNNNNNNNGC	7 cut(s)	391, 575, 764, 821, 1046, 1229, 1826
HpyF3I	CTNAG	5 cut(s)	409, 642, 1041, 1248, 1287
HpySE526I	ACGT	3 cut(s)	763, 938, 1683
Hsp92I	GRCGYC	3 cut(s)	288, 420, 470
Hsp92II	CATG	7 cut(s)	628, 661, 788, 800, 1106, 1240, 1662
HspAI	GCGC	4 cut(s)	369, 399, 569, 1495
Kpn2I	TCCGGA	2 cut(s)	257, 432
KroI	GCCGGC	1 cut(s)	1713
KroNI	GCCGGC	1 cut(s)	1715
Ksp22I	TGATCA	1 cut(s)	1410
LmnI	GCTCC	6 cut(s)	391, 435, 1069, 1133, 1193, 1764
Lsp1109I	GCAGC	2 cut(s)	1033, 1873
LweI	GCATC	5 cut(s)	542, 640, 975, 994, 1431
MaeI	CTAG	5 cut(s)	630, 759, 1137, 1392, 1457
MaeII	ACGT	3 cut(s)	763, 938, 1683
MaeIII	GTNAC	3 cut(s)	208, 1111, 1117
MbiI	CCGCTC	1 cut(s)	438
MfeI	CAATTG	1 cut(s)	1167
MflI	RGATCY	2 cut(s)	405, 526
MhlI	GDGCHC	5 cut(s)	396, 603, 826, 1021, 1563
MluCI	AATT	5 cut(s)	1167, 1313, 1335, 1583, 1872
MlyI	GAGTC	4 cut(s)	999, 1517, 1541, 1571
MmeI	TCCRAC	4 cut(s)	309, 490, 724, 1171
Mph1103I	ATGCAT	2 cut(s)	786, 1009
MroI	TCCGGA	2 cut(s)	257, 432
MroNI	GCCGGC	1 cut(s)	1713
MroXI	GAANNNNTTC	1 cut(s)	187
MseI	TTAA	4 cut(s)	564, 927, 972, 1911
MslI	CAYNNNNRTG	3 cut(s)	177, 623, 1107
MspA1I	CMGCKG	1 cut(s)	815
MspCI	CTTAAG	1 cut(s)	1910
MspI	CCGG	7 cut(s)	245, 258, 386, 433, 1402, 1714, 1731
MspR9I	CCNGG	7 cut(s)	305, 335, 362, 860, 1403, 1556, 1731
MunI	CAATTG	1 cut(s)	1167
Mva1269I	GAATGC	1 cut(s)	786
MvaI	CCWGG	5 cut(s)	305, 335, 362, 860, 1556
MvnI	CGCG	1 cut(s)	371
MwoI	GCNNNNNNNGC	7 cut(s)	391, 575, 764, 821, 1046, 1229, 1826
NaeI	GCCGGC	1 cut(s)	1715
NciI	CCSGG	2 cut(s)	1403, 1731
NcoI	CCATGG	2 cut(s)	624, 1236
NdeI	CATATG	2 cut(s)	805, 894
NgoMIV	GCCGGC	1 cut(s)	1713
NheI	GCTAGC	1 cut(s)	1136
NlaIII	CATG	7 cut(s)	628, 661, 788, 800, 1106, 1240, 1662
NlaIV	GGNNCC	7 cut(s)	359, 1071, 1242, 1647, 1700, 1766, 1848
NmeAIII	GCCGAG	1 cut(s)	1204
NmuCI	GTSAC	3 cut(s)	208, 1111, 1117
NsbI	TGCGCA	1 cut(s)	1496
NsiI	ATGCAT	2 cut(s)	786, 1009
NspI	RCATGY	2 cut(s)	788, 1662
PaeR7I	CTCGAG	1 cut(s)	1368
PaqCI	CACCTGC	1 cut(s)	1708
PciI	ACATGT	1 cut(s)	1658
PcsI	WCGNNNNNNNCGW	1 cut(s)	426
PctI	GAATGC	1 cut(s)	786
PdiI	GCCGGC	1 cut(s)	1715
PdmI	GAANNNNTTC	1 cut(s)	187
PfeI	GAWTC	1 cut(s)	1373
PkrI	GCNGC	5 cut(s)	538, 592, 595, 1048, 1888
PleI	GAGTC	4 cut(s)	998, 1517, 1541, 1571
PpsI	GAGTC	4 cut(s)	998, 1517, 1541, 1571
PscI	ACATGT	1 cut(s)	1658
PshAI	GACNNNNGTC	1 cut(s)	446
PshBI	ATTAAT	1 cut(s)	972
Psp124BI	GAGCTC	1 cut(s)	396
Psp6I	CCWGG	5 cut(s)	303, 333, 360, 858, 1554
PspFI	CCCAGC	2 cut(s)	811, 1294
PspGI	CCWGG	5 cut(s)	303, 333, 360, 858, 1554
PspN4I	GGNNCC	7 cut(s)	359, 1071, 1242, 1647, 1700, 1766, 1848
PspPI	GGNCC	1 cut(s)	331
PstI	CTGCAG	2 cut(s)	534, 877
PsuI	RGATCY	2 cut(s)	405, 526
PvuII	CAGCTG	1 cut(s)	815
RsaI	GTAC	4 cut(s)	231, 374, 1311, 1358
RsaNI	GTAC	4 cut(s)	230, 373, 1310, 1357
RseI	CAYNNNNRTG	3 cut(s)	177, 623, 1107
SacI	GAGCTC	1 cut(s)	396
SaqAI	TTAA	4 cut(s)	564, 927, 972, 1911
SatI	GCNGC	5 cut(s)	537, 591, 594, 1047, 1887
Sau96I	GGNCC	1 cut(s)	331
SchI	GAGTC	4 cut(s)	999, 1517, 1541, 1571
ScrFI	CCNGG	7 cut(s)	305, 335, 362, 860, 1403, 1556, 1731
SduI	GDGCHC	5 cut(s)	396, 603, 826, 1021, 1563
SfaNI	GCATC	5 cut(s)	542, 640, 975, 994, 1431
SfcI	CTRYAG	3 cut(s)	530, 873, 1916
Sfr274I	CTCGAG	1 cut(s)	1368
SlaI	CTCGAG	1 cut(s)	1368
SmiMI	CAYNNNNRTG	3 cut(s)	177, 623, 1107
SmlI	CTYRAG	2 cut(s)	1368, 1910
SmoI	CTYRAG	2 cut(s)	1368, 1910
Sse9I	AATT	5 cut(s)	1167, 1313, 1335, 1583, 1872
SsiI	CCGC	6 cut(s)	329, 438, 536, 591, 594, 1029
SspI	AATATT	1 cut(s)	1756
SspMI	CTAG	5 cut(s)	630, 759, 1137, 1392, 1457
SstI	GAGCTC	1 cut(s)	396
StyD4I	CCNGG	7 cut(s)	303, 333, 360, 858, 1401, 1554, 1729
StyI	CCWWGG	2 cut(s)	624, 1236
TaaI	ACNGT	4 cut(s)	229, 234, 586, 1117
TaiI	ACGT	3 cut(s)	766, 941, 1686
TaqI	TCGA	6 cut(s)	265, 465, 473, 855, 1260, 1369
TasI	AATT	5 cut(s)	1167, 1313, 1335, 1583, 1872
TatI	WGTACW	2 cut(s)	1309, 1356
TauI	GCSGC	3 cut(s)	539, 593, 596
TfiI	GAWTC	1 cut(s)	1373
Tru1I	TTAA	4 cut(s)	564, 927, 972, 1911
Tru9I	TTAA	4 cut(s)	564, 927, 972, 1911
TscAI	CASTG	1 cut(s)	877
TseFI	GTSAC	3 cut(s)	208, 1111, 1117
TseI	GCWGC	2 cut(s)	1046, 1886
Tsp45I	GTSAC	3 cut(s)	208, 1111, 1117
TspDTI	ATGAA	4 cut(s)	674, 965, 1014, 1438
TspGWI	ACGGA	2 cut(s)	557, 1585
TspRI	CASTG	1 cut(s)	877
Vha464I	CTTAAG	1 cut(s)	1910
VneI	GTGCAC	1 cut(s)	1559
VspI	ATTAAT	1 cut(s)	972
XapI	RAATTY	1 cut(s)	1583
XceI	RCATGY	2 cut(s)	788, 1662
XhoI	CTCGAG	1 cut(s)	1368
XmnI	GAANNNNTTC	1 cut(s)	187
XspI	CTAG	5 cut(s)	630, 759, 1137, 1392, 1457
Zsp2I	ATGCAT	2 cut(s)	786, 1009

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.