pycom05g31920

BAH and coiled-coil domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0001869
Physical Location & Seq
Reverse (-)
31456751 .. 31458418
1668 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g31920.2

Sequence Viewer

Length: 651 bp
ATGGCCAGAACCAGACCAGGAAAAAAGGAGTCAAGGGACGTGGACTCTTACACTATCAGGGGCACCAACAAAATCGTCAGAGCTGGGGATACCGTCCTGATGCGCCCGTCGGACACCGGAAAGCCGCCGTACGTGGCGCGCATCGAGAAGATCGATCGTGAAAGCCGAGGCGGCATGAAAGTGAGAGTGAGGTGGTATTACAGGCCGGAGGAGTCGATTGGAGGGCGGCGGCAGTTCCATGGAGCCAAAGAGTTGTTCTTGTCCGACCACTATGATGTGCAGAGCGCTCACACCATTGAAGGCAAGTGTACAGTGCACTCCTTCAAGAACTACACTAAGCTGGAGAATGTTGGAGCTGAAGATTACTACTGTAGATTTGAGTACAAGGCTGCTACTGGAGCGTTCTCGCCCGACCGAGTTGCTGTGTATTGCAAGTGTGAGATGCCGTATAACCCGGATGACCTCATGGTACAATGTGAGGGGTGTAAGGACTGGTACCATCCTGCTTGTGTGGCCATGACTATTGTGGAAGCAAAAAAATTGGAAAGCTTTTTGTGTTCCGAGTGTTCAGCTGAAGGTGACGGGAAAAAGCCCCAGAATGCAGTTCCAGCAGCTGTTGCGAAGCTCGAGCCCAAGCGCCGTAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0005694 GO:0006323 GO:0006325 GO:0006333 GO:0006338 GO:0006342 GO:0006355 GO:0006996 GO:0007275 GO:0008150 GO:0009791 GO:0009845 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010639 GO:0016043 GO:0016458 GO:0017053 GO:0019219 GO:0019222 GO:0022607 GO:0031056 GO:0031057 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031399 GO:0031400 GO:0031497 GO:0031507 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0035064 GO:0035065 GO:0035067 GO:0040029 GO:0042393 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044085 GO:0044212 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070828 GO:0071103 GO:0071840 GO:0080090 GO:0090351 GO:0090568 GO:0097159 GO:0140030 GO:0140034 GO:1901363 GO:1901983 GO:1901984 GO:1902275 GO:1902679 GO:1903506 GO:1903507 GO:1905268 GO:1990837 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2000756 GO:2000757 GO:2001141 GO:2001251
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAH PHD

Protein Analysis

217

Amino Acids

24.55

Weight (kDa)

9.04

Isoelectric Point (pI)

44.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 495
AccB1I GGYRCC 2 cut(s) 62, 495
AccII CGCG 1 cut(s) 139
AciI CCGC 4 cut(s) 125, 171, 226, 229
AcoI YGGCCR 2 cut(s) 3, 513
AcuI CTGAAG 2 cut(s) 378, 594
AfaI GTAC 5 cut(s) 131, 310, 383, 471, 497
AfeI AGCGCT 1 cut(s) 286
AgsI TTSAA 2 cut(s) 299, 325
AjiI CACGTC 1 cut(s) 40
AjnI CCWGG 1 cut(s) 16
AjuI GAANNNNNNNTTGG 2 cut(s) 239, 271
AluBI AGCT 7 cut(s) 83, 340, 356, 549, 572, 614, 625
AluI AGCT 7 cut(s) 83, 340, 356, 549, 572, 614, 625
Alw21I GWGCWC 1 cut(s) 318
Alw44I GTGCAC 1 cut(s) 314
AlwNI CAGNNNCTG 1 cut(s) 614
Ama87I CYCGRG 1 cut(s) 626
Aor51HI AGCGCT 1 cut(s) 286
AoxI GGCC 3 cut(s) 3, 203, 513
ApaLI GTGCAC 1 cut(s) 314
ApeKI GCWGC 2 cut(s) 389, 611
Asp718I GGTACC 1 cut(s) 495
AspLEI GCGC 5 cut(s) 105, 139, 141, 287, 639
AsuC2I CCSGG 1 cut(s) 455
AsuHPI GGTGA 1 cut(s) 590
AvaI CYCGRG 1 cut(s) 626
BaeGI GKGCMC 2 cut(s) 65, 318
BalI TGGCCA 2 cut(s) 5, 515
BanI GGYRCC 2 cut(s) 62, 495
BanII GRGCYC 1 cut(s) 633
Bbv12I GWGCWC 1 cut(s) 318
BbvI GCAGC 2 cut(s) 376, 623
BccI CCATC 1 cut(s) 507
BceAI ACGGC 3 cut(s) 112, 430, 624
BcgI CGANNNNNNTGC 2 cut(s) 401, 435
BciT130I CCWGG 1 cut(s) 18
BciVI GTATCC 1 cut(s) 82
BcnI CCSGG 1 cut(s) 455
BfmI CTRYAG 1 cut(s) 370
BfoI RGCGCY 2 cut(s) 288, 640
BfuI GTATCC 1 cut(s) 82
BglI GCCNNNNNGGC 1 cut(s) 171
BisI GCNGC 6 cut(s) 125, 172, 227, 230, 390, 612
BlsI GCNGC 6 cut(s) 126, 173, 228, 231, 391, 613
Bme1390I CCNGG 2 cut(s) 18, 455
BmeT110I CYCGRG 1 cut(s) 626
BmgBI CACGTC 1 cut(s) 40
BmiI GGNNCC 3 cut(s) 64, 244, 497
BmrFI CCNGG 2 cut(s) 18, 455
BmsI GCATC 3 cut(s) 90, 150, 432
BpmI CTGGAG 2 cut(s) 362, 417
BpuMI CCSGG 1 cut(s) 455
Bsa29I ATCGAT 1 cut(s) 153
BsaAI YACGTR 1 cut(s) 133
BsaJI CCNNGG 2 cut(s) 166, 238
BsaWI WCCGGW 1 cut(s) 116
Bse1I ACTGG 2 cut(s) 400, 497
BseBI CCWGG 1 cut(s) 18
BseCI ATCGAT 1 cut(s) 153
BseDI CCNNGG 2 cut(s) 166, 238
BseGI GGATG 2 cut(s) 463, 499
BseNI ACTGG 2 cut(s) 400, 497
BsePI GCGCGC 1 cut(s) 137
BseRI GAGGAG 1 cut(s) 224
BseSI GKGCMC 2 cut(s) 65, 318
BseXI GCAGC 2 cut(s) 376, 623
BseYI CCCAGC 1 cut(s) 83
BsgI GTGCAG 1 cut(s) 299
Bsh1236I CGCG 1 cut(s) 139
Bsh1285I CGRYCG 2 cut(s) 157, 415
BshFI GGCC 3 cut(s) 5, 205, 515
BshNI GGYRCC 2 cut(s) 62, 495
BshVI ATCGAT 1 cut(s) 153
BsiEI CGRYCG 2 cut(s) 157, 415
BsiHKAI GWGCWC 1 cut(s) 318
BsiHKCI CYCGRG 1 cut(s) 626
BsiSI CCGG 3 cut(s) 117, 206, 455
BsiWI CGTACG 1 cut(s) 129
BslFI GGGAC 1 cut(s) 50
BsmFI GGGAC 1 cut(s) 50
BsmI GAATGC 1 cut(s) 604
BsnI GGCC 3 cut(s) 5, 205, 515
BsoBI CYCGRG 1 cut(s) 626
Bsp1286I GDGCHC 3 cut(s) 65, 318, 633
Bsp1407I TGTACA 1 cut(s) 308
Bsp143I GATC 2 cut(s) 150, 154
Bsp19I CCATGG 1 cut(s) 238
BspACI CCGC 4 cut(s) 125, 171, 226, 229
BspANI GGCC 3 cut(s) 5, 205, 515
BspDI ATCGAT 1 cut(s) 153
BspFNI CGCG 1 cut(s) 139
BspLI GGNNCC 3 cut(s) 64, 244, 497
BspT107I GGYRCC 2 cut(s) 62, 495
BsrGI TGTACA 1 cut(s) 308
BsrI ACTGG 2 cut(s) 400, 497
BssECI CCNNGG 2 cut(s) 166, 238
BssHII GCGCGC 1 cut(s) 137
BssMI GATC 2 cut(s) 150, 154
BssT1I CCWWGG 1 cut(s) 238
Bst2UI CCWGG 1 cut(s) 18
Bst4CI ACNGT 3 cut(s) 94, 313, 371
BstAPI GCANNNNNTGC 1 cut(s) 617
BstAUI TGTACA 1 cut(s) 308
BstBAI YACGTR 1 cut(s) 133
BstC8I GCNNGC 1 cut(s) 139
BstDEI CTNAG 1 cut(s) 336
BstDSI CCRYGG 1 cut(s) 238
BstF5I GGATG 2 cut(s) 463, 499
BstFNI CGCG 1 cut(s) 139
BstH2I RGCGCY 2 cut(s) 288, 640
BstHHI GCGC 5 cut(s) 105, 139, 141, 287, 639
BstKTI GATC 2 cut(s) 153, 157
BstMBI GATC 2 cut(s) 150, 154
BstMCI CGRYCG 2 cut(s) 157, 415
BstMWI GCNNNNNNNGC 5 cut(s) 171, 398, 512, 608, 617
BstNI CCWGG 1 cut(s) 18
BstSCI CCNGG 2 cut(s) 16, 453
BstSFI CTRYAG 1 cut(s) 370
BstSLI GKGCMC 2 cut(s) 65, 318
BstUI CGCG 1 cut(s) 139
BstV1I GCAGC 2 cut(s) 376, 623
Bsu15I ATCGAT 1 cut(s) 153
BsuI GTATCC 1 cut(s) 82
BsuRI GGCC 3 cut(s) 5, 205, 515
BsuTUI ATCGAT 1 cut(s) 153
BtgI CCRYGG 1 cut(s) 238
BtrI CACGTC 1 cut(s) 40
BtsCI GGATG 2 cut(s) 463, 499
BtsIMutI CAGTG 1 cut(s) 318
Cac8I GCNNGC 1 cut(s) 139
CaiI CAGNNNCTG 1 cut(s) 614
CfoI GCGC 5 cut(s) 105, 139, 141, 287, 639
ClaI ATCGAT 1 cut(s) 153
Csp6I GTAC 5 cut(s) 130, 309, 382, 470, 496
CspCI CAANNNNNGTGG 2 cut(s) 21, 56
CviAII CATG 4 cut(s) 175, 239, 466, 517
CviQI GTAC 5 cut(s) 130, 309, 382, 470, 496
DdeI CTNAG 1 cut(s) 336
DpnI GATC 2 cut(s) 152, 156
DpnII GATC 2 cut(s) 150, 154
EaeI YGGCCR 2 cut(s) 3, 513
Eco130I CCWWGG 1 cut(s) 238
Eco24I GRGCYC 1 cut(s) 633
Eco47III AGCGCT 1 cut(s) 286
Eco57I CTGAAG 2 cut(s) 378, 594
Eco88I CYCGRG 1 cut(s) 626
EcoRII CCWGG 1 cut(s) 16
EcoT14I CCWWGG 1 cut(s) 238
EcoT38I GRGCYC 1 cut(s) 633
ErhI CCWWGG 1 cut(s) 238
FaeI CATG 4 cut(s) 178, 242, 469, 520
FaiI YATR 6 cut(s) 176, 240, 273, 450, 467, 518
FaqI GGGAC 1 cut(s) 50
FatI CATG 4 cut(s) 174, 238, 465, 516
Fnu4HI GCNGC 6 cut(s) 125, 172, 227, 230, 390, 612
FokI GGATG 2 cut(s) 470, 486
FriOI GRGCYC 1 cut(s) 633
Fsp4HI GCNGC 6 cut(s) 125, 172, 227, 230, 390, 612
GlaI GCGC 5 cut(s) 104, 138, 140, 286, 638
GluI GCNGC 6 cut(s) 125, 172, 227, 230, 390, 612
GsaI CCCAGC 1 cut(s) 87
GsuI CTGGAG 2 cut(s) 362, 417
HaeII RGCGCY 2 cut(s) 288, 640
HaeIII GGCC 3 cut(s) 5, 205, 515
HapII CCGG 3 cut(s) 117, 206, 455
HhaI GCGC 5 cut(s) 105, 139, 141, 287, 639
Hin1II CATG 4 cut(s) 178, 242, 469, 520
Hin6I GCGC 5 cut(s) 103, 137, 139, 285, 637
HinP1I GCGC 5 cut(s) 103, 137, 139, 285, 637
HindIII AAGCTT 1 cut(s) 547
HinfI GANTC 3 cut(s) 29, 44, 212
HpaII CCGG 3 cut(s) 117, 206, 455
HphI GGTGA 1 cut(s) 590
Hpy166II GTNNAC 3 cut(s) 43, 309, 316
Hpy188I TCNGA 4 cut(s) 80, 112, 265, 562
Hpy188III TCNNGA 4 cut(s) 97, 145, 158, 325
Hpy8I GTNNAC 3 cut(s) 43, 309, 316
Hpy99I CGWCG 1 cut(s) 112
HpyAV CCTTC 3 cut(s) 293, 331, 569
HpyCH4III ACNGT 3 cut(s) 94, 313, 371
HpyCH4IV ACGT 2 cut(s) 39, 132
HpyCH4V TGCA 4 cut(s) 280, 316, 432, 602
HpyF10VI GCNNNNNNNGC 5 cut(s) 171, 398, 512, 608, 617
HpyF3I CTNAG 1 cut(s) 336
HpySE526I ACGT 2 cut(s) 39, 132
Hsp92II CATG 4 cut(s) 178, 242, 469, 520
HspAI GCGC 5 cut(s) 103, 137, 139, 285, 637
KpnI GGTACC 1 cut(s) 499
Kzo9I GATC 2 cut(s) 150, 154
LmnI GCTCC 3 cut(s) 242, 353, 398
Lsp1109I GCAGC 2 cut(s) 376, 623
LweI GCATC 3 cut(s) 90, 150, 432
MaeII ACGT 2 cut(s) 39, 132
MaeIII GTNAC 1 cut(s) 578
MalI GATC 2 cut(s) 152, 156
MboI GATC 2 cut(s) 150, 154
MboII GAAGA 2 cut(s) 160, 371
MhlI GDGCHC 3 cut(s) 65, 318, 633
MlsI TGGCCA 2 cut(s) 5, 515
MluCI AATT 1 cut(s) 539
MluNI TGGCCA 2 cut(s) 5, 515
MlyI GAGTC 3 cut(s) 38, 38, 221
MmeI TCCRAC 3 cut(s) 90, 288, 331
MnlI CCTC 6 cut(s) 161, 183, 202, 215, 472, 473
Mox20I TGGCCA 2 cut(s) 5, 515
MscI TGGCCA 2 cut(s) 5, 515
MslI CAYNNNNRTG 2 cut(s) 179, 273
Msp20I TGGCCA 2 cut(s) 5, 515
MspA1I CMGCKG 2 cut(s) 572, 614
MspI CCGG 3 cut(s) 117, 206, 455
MspR9I CCNGG 2 cut(s) 18, 455
Mva1269I GAATGC 1 cut(s) 604
MvaI CCWGG 1 cut(s) 18
MvnI CGCG 1 cut(s) 139
MwoI GCNNNNNNNGC 5 cut(s) 171, 398, 512, 608, 617
NciI CCSGG 1 cut(s) 455
NcoI CCATGG 1 cut(s) 238
NdeII GATC 2 cut(s) 150, 154
NlaIII CATG 4 cut(s) 178, 242, 469, 520
NlaIV GGNNCC 3 cut(s) 64, 244, 497
NmeAIII GCCGAG 1 cut(s) 191
NmuCI GTSAC 1 cut(s) 578
PaeR7I CTCGAG 1 cut(s) 626
PauI GCGCGC 1 cut(s) 137
PcsI WCGNNNNNNNCGW 2 cut(s) 150, 163
PctI GAATGC 1 cut(s) 604
Pfl23II CGTACG 1 cut(s) 129
PkrI GCNGC 6 cut(s) 126, 173, 228, 231, 391, 613
Ple19I CGATCG 1 cut(s) 157
PleI GAGTC 3 cut(s) 37, 38, 220
PpsI GAGTC 3 cut(s) 37, 38, 220
Ppu21I YACGTR 1 cut(s) 133
Psp6I CCWGG 1 cut(s) 16
PspFI CCCAGC 1 cut(s) 83
PspGI CCWGG 1 cut(s) 16
PspLI CGTACG 1 cut(s) 129
PspN4I GGNNCC 3 cut(s) 64, 244, 497
PspXI VCTCGAGB 1 cut(s) 626
PstNI CAGNNNCTG 1 cut(s) 614
PteI GCGCGC 1 cut(s) 137
PvuI CGATCG 1 cut(s) 157
PvuII CAGCTG 2 cut(s) 572, 614
RsaI GTAC 5 cut(s) 131, 310, 383, 471, 497
RsaNI GTAC 5 cut(s) 130, 309, 382, 470, 496
RseI CAYNNNNRTG 2 cut(s) 179, 273
SatI GCNGC 6 cut(s) 125, 172, 227, 230, 390, 612
Sau3AI GATC 2 cut(s) 150, 154
SchI GAGTC 3 cut(s) 38, 38, 221
ScrFI CCNGG 2 cut(s) 18, 455
SduI GDGCHC 3 cut(s) 65, 318, 633
SfaNI GCATC 3 cut(s) 90, 150, 432
SfcI CTRYAG 1 cut(s) 370
Sfr274I CTCGAG 1 cut(s) 626
SlaI CTCGAG 1 cut(s) 626
SmiMI CAYNNNNRTG 2 cut(s) 179, 273
SmlI CTYRAG 1 cut(s) 626
SmoI CTYRAG 1 cut(s) 626
Sse9I AATT 1 cut(s) 539
SsiI CCGC 4 cut(s) 125, 171, 226, 229
StyD4I CCNGG 2 cut(s) 16, 453
StyI CCWWGG 1 cut(s) 238
TaaI ACNGT 3 cut(s) 94, 313, 371
TaiI ACGT 2 cut(s) 42, 135
TaqI TCGA 4 cut(s) 144, 153, 215, 627
TaqII GACCGA 1 cut(s) 429
TasI AATT 1 cut(s) 539
TatI WGTACW 2 cut(s) 308, 381
TauI GCSGC 4 cut(s) 127, 174, 229, 232
TscAI CASTG 1 cut(s) 318
TseFI GTSAC 1 cut(s) 578
TseI GCWGC 2 cut(s) 389, 611
Tsp45I GTSAC 1 cut(s) 578
TspDTI ATGAA 1 cut(s) 191
TspRI CASTG 1 cut(s) 318
VneI GTGCAC 1 cut(s) 314
XcmI CCANNNNNNNNNTGG 1 cut(s) 523
XhoI CTCGAG 1 cut(s) 626
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.