Rorug04G0394600

BAH and coiled-coil domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0001869
Physical Location & Seq
Forward (+)
56072514 .. 56076760
4247 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0394600.1

Sequence Viewer

Length: 1551 bp
ATGGAGGTTAGATCTGAGGGTGTCCATGTCCGCTGCGATAAGCTTCCGTCGCCGAGGATTGCGTCGTCGCCGGTGATTCAGTCGCCCAAGCTTCCGGCGCCGGCGATTGCGAGGACGCGGCTGCAGGTGTGGTTCATACGGTTGTGCTCAAGCTTGTTTGTTTGGACTTGTTTGGTTCAGTTGGTGGCGGTTGGGGAGTTTTGGAGTCCGCATTTGTTCTCCAACTTAACCAATCGGATATCCCAAATTACACAGATTCCCGCTCAGGGGGTTCTTCTTTCTCCGCCGCCTCTTCCTCCTGCAAGAAATTATACAAGTAATGGGTTTCTTAGAGTTTCATGCAACGGGGGCTTGAATCAAATGCGTGCTGCGATTTGTGACATGGTGACTGTTGCTCGGCTTTTAAATCTCACTTTGGTTGTTCCAGAGCTTGATAAGACATCTTTCTGGGCCGATCCTAGTAATTTTGAGGATATATTTGATTTAAGACATTTCATTGATTCACTGAGAGACGAAGTCCGAATTGTCAGAAGACTGCCAAAATACTTTAGTAGGAAATATGGGTATAAACCACTCGAGATGCCTCCTGTTAGTTGGTCAAATGAAAAATACTATCTCGAACAGATTCTGCCACTTGTTAGCAAGCATAAGGTGCTGCACTTTAACAGAACAGATACACGCTTGGCAAACAATTGGATACCTCTTGATCTTCAGAAACTCAGGTGTCGCGTTAATTTTCAGGCGCTGAAGTTCACTCCAAAGATTGAGTCTTTGGGTTACAAATTGGTTCGTATGCTTCAAGAAAAGGGACCTTTCGTGACTTTGCATCTAAGGTATGAGATGGACATGCTGGCTTTCTCAGGTTGTACTCATGGCTGCACAGCTGAAGAAGCCGAGGAGCTCAAACGGTTAAGGTATGCATATCCTTGGTGGAGAGAGAAAGAGATAGTGTCTGAAGAGAAGAGGTCTCAAGGGCTGTGTCCTCTGACACCAGAGGAAAGTGCATTAATTTTGCAAGCATTGGGTATTAGCAAAGACACACAGATCTATATTGCAGCTGGTGAGATTTATGGCAGGGACAGGAGACTTGCACCGCTAAGAGCTGCGTTTCCCCGAATTGTTAAGAAGGAAACTCTTCTCGCACCAGAGGAATTGCAACAATTTCAGAATCATTCATCTCAAATGGCTGCTTTGGATTTTATGGTTGCGGTAGCCAGTAATACTTTTGTCCCTACCTATGATGGAAACATGGCGAAGCTTGTTGAAGGTCACCGTAGGTATCTTGGTTTTAAAAAAAGCATCTTGCTAGATCGGAAAAAACTTGTCGAGTTATTAGACATGCATTTAAATGGGACTCTTTCGTGGAATGGGTTTGCACTTGCTGTAAGATCCGTTCATGAGAGAAGAATGGGACAGCCAACTCAGCGAACAGTTATCCCAGAGAAGCCAAAGGAGGAGGACTATTTTTATGCAAATCCTCAGGAGTGCCTCTGCATGGGAACGAATTGTGATGATTTGCTTAGCCGTGGTAACTTAAGTAAACCTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0005694 GO:0006323 GO:0006325 GO:0006333 GO:0006338 GO:0006342 GO:0006355 GO:0006996 GO:0007275 GO:0008150 GO:0009791 GO:0009845 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010639 GO:0016043 GO:0016458 GO:0017053 GO:0019219 GO:0019222 GO:0022607 GO:0031056 GO:0031057 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031399 GO:0031400 GO:0031497 GO:0031507 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0035064 GO:0035065 GO:0035067 GO:0040029 GO:0042393 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044085 GO:0044212 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070828 GO:0071103 GO:0071840 GO:0080090 GO:0090351 GO:0090568 GO:0097159 GO:0140030 GO:0140034 GO:1901363 GO:1901983 GO:1901984 GO:1902275 GO:1902679 GO:1903506 GO:1903507 GO:1905268 GO:1990837 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2000756 GO:2000757 GO:2001141 GO:2001251
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAH PHD

Protein Analysis

516

Amino Acids

59.21

Weight (kDa)

9.28

Isoelectric Point (pI)

52.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 109 - 428 9.6e-108 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 115
Acc36I ACCTGC 1 cut(s) 115
AccB1I GGYRCC 1 cut(s) 97
AccBSI CCGCTC 1 cut(s) 263
AccII CGCG 2 cut(s) 118, 729
AciI CCGC 9 cut(s) 31, 118, 188, 209, 261, 284, 287, 1094, 1208
AclWI GGATC 2 cut(s) 449, 1383
AcuI CTGAAG 4 cut(s) 695, 767, 906, 975
AcyI GRCGYC 1 cut(s) 98
AfaI GTAC 1 cut(s) 868
AfiI CCNNNNNNNGG 3 cut(s) 266, 267, 1495
AflII CTTAAG 1 cut(s) 1534
AgsI TTSAA 3 cut(s) 355, 800, 1265
AluBI AGCT 9 cut(s) 43, 91, 153, 430, 884, 901, 1058, 1103, 1258
AluI AGCT 9 cut(s) 43, 91, 153, 430, 884, 901, 1058, 1103, 1258
Alw21I GWGCWC 2 cut(s) 149, 903
Alw26I GTCTC 3 cut(s) 504, 972, 1078
AlwI GGATC 2 cut(s) 449, 1383
AlwNI CAGNNNCTG 2 cut(s) 628, 745
Ama87I CYCGRG 1 cut(s) 575
AoxI GGCC 1 cut(s) 450
ApeKI GCWGC 8 cut(s) 33, 121, 368, 655, 876, 1055, 1103, 1187
ArsI GACNNNNNNTTYG 2 cut(s) 752, 784
AseI ATTAAT 1 cut(s) 1007
Asp700I GAANNNNTTC 2 cut(s) 624, 1134
AspA2I CCTAGG 1 cut(s) 1544
AspLEI GCGC 2 cut(s) 100, 745
AspS9I GGNCC 2 cut(s) 450, 809
AsuHPI GGTGA 4 cut(s) 85, 397, 1073, 1262
AvaI CYCGRG 1 cut(s) 575
AvaII GGWCC 1 cut(s) 809
AvrII CCTAGG 1 cut(s) 1544
AxyI CCTNAGG 1 cut(s) 1479
BanI GGYRCC 1 cut(s) 97
BanII GRGCYC 1 cut(s) 903
BbsI GAAGAC 1 cut(s) 538
Bbv12I GWGCWC 2 cut(s) 149, 903
BbvI GCAGC 8 cut(s) 20, 108, 355, 642, 863, 1067, 1090, 1174
BccI CCATC 2 cut(s) 835, 1235
BceAI ACGGC 1 cut(s) 1509
BciVI GTATCC 1 cut(s) 690
BcoDI GTCTC 3 cut(s) 504, 972, 1078
BfaI CTAG 3 cut(s) 459, 1307, 1545
BfmI CTRYAG 1 cut(s) 122
BfoI RGCGCY 2 cut(s) 101, 746
BfrI CTTAAG 1 cut(s) 1534
BfuAI ACCTGC 1 cut(s) 115
BfuI GTATCC 1 cut(s) 690
BglII AGATCT 2 cut(s) 11, 1044
BlnI CCTAGG 1 cut(s) 1544
BlpI GCTNAGC 1 cut(s) 1520
Bme18I GGWCC 1 cut(s) 809
BmeT110I CYCGRG 1 cut(s) 575
BmgT120I GGNCC 2 cut(s) 450, 809
BmiI GGNNCC 2 cut(s) 99, 810
BmsI GCATC 3 cut(s) 570, 835, 1308
BpiI GAAGAC 1 cut(s) 538
Bpu10I CCTNAGC 1 cut(s) 264
Bpu1102I GCTNAGC 1 cut(s) 1520
BpuEI CTTGAG 2 cut(s) 133, 954
BsaHI GRCGYC 1 cut(s) 98
BsaI GGTCTC 1 cut(s) 972
BsaJI CCNNGG 5 cut(s) 53, 894, 926, 1525, 1544
Bsc4I CCNNNNNNNGG 3 cut(s) 266, 267, 1495
Bse118I RCCGGY 2 cut(s) 70, 100
Bse1I ACTGG 1 cut(s) 1215
Bse21I CCTNAGG 1 cut(s) 1479
BseDI CCNNGG 5 cut(s) 53, 894, 926, 1525, 1544
BseLI CCNNNNNNNGG 3 cut(s) 266, 267, 1495
BseMII CTCAG 7 cut(s) 6, 278, 497, 733, 873, 1436, 1493
BseNI ACTGG 1 cut(s) 1215
BseRI GAGGAG 2 cut(s) 911, 1469
BseXI GCAGC 8 cut(s) 20, 108, 355, 642, 863, 1067, 1090, 1174
BsgI GTGCAG 2 cut(s) 641, 862
Bsh1236I CGCG 2 cut(s) 118, 729
BshFI GGCC 1 cut(s) 452
BshNI GGYRCC 1 cut(s) 97
BsiHKAI GWGCWC 2 cut(s) 149, 903
BsiHKCI CYCGRG 1 cut(s) 575
BsiSI CCGG 3 cut(s) 71, 95, 101
BslFI GGGAC 5 cut(s) 822, 1091, 1214, 1366, 1425
BslI CCNNNNNNNGG 3 cut(s) 266, 267, 1495
BsmAI GTCTC 3 cut(s) 504, 972, 1078
BsmBI CGTCTC 1 cut(s) 504
BsmFI GGGAC 5 cut(s) 822, 1091, 1214, 1366, 1425
BsnI GGCC 1 cut(s) 452
Bso31I GGTCTC 1 cut(s) 972
BsoBI CYCGRG 1 cut(s) 575
Bsp1286I GDGCHC 2 cut(s) 149, 903
Bsp143I GATC 6 cut(s) 11, 454, 706, 1044, 1309, 1388
Bsp1720I GCTNAGC 1 cut(s) 1520
BspACI CCGC 9 cut(s) 31, 118, 188, 209, 261, 284, 287, 1094, 1208
BspANI GGCC 1 cut(s) 452
BspCNI CTCAG 7 cut(s) 7, 277, 498, 732, 872, 1435, 1492
BspFNI CGCG 2 cut(s) 118, 729
BspHI TCATGA 1 cut(s) 1396
BspLI GGNNCC 2 cut(s) 99, 810
BspMAI CTGCAG 1 cut(s) 126
BspMI ACCTGC 1 cut(s) 115
BspPI GGATC 2 cut(s) 449, 1383
BspT107I GGYRCC 1 cut(s) 97
BspTI CTTAAG 1 cut(s) 1534
BspTNI GGTCTC 1 cut(s) 972
BsrBI CCGCTC 1 cut(s) 263
BsrFI RCCGGY 2 cut(s) 70, 100
BsrI ACTGG 1 cut(s) 1215
BssAI RCCGGY 2 cut(s) 70, 100
BssECI CCNNGG 5 cut(s) 53, 894, 926, 1525, 1544
BssMI GATC 6 cut(s) 11, 454, 706, 1044, 1309, 1388
BssNI GRCGYC 1 cut(s) 98
BssT1I CCWWGG 2 cut(s) 926, 1544
Bst4CI ACNGT 5 cut(s) 141, 391, 909, 1274, 1432
Bst6I CTCTTC 4 cut(s) 297, 951, 956, 1140
BstACI GRCGYC 1 cut(s) 98
BstAFI CTTAAG 1 cut(s) 1534
BstAPI GCANNNNNTGC 1 cut(s) 652
BstC8I GCNNGC 5 cut(s) 102, 366, 644, 852, 1017
BstDSI CCRYGG 1 cut(s) 1525
BstEII GGTNACC 1 cut(s) 1268
BstFNI CGCG 2 cut(s) 118, 729
BstH2I RGCGCY 2 cut(s) 101, 746
BstHHI GCGC 2 cut(s) 100, 745
BstKTI GATC 6 cut(s) 14, 457, 709, 1047, 1312, 1391
BstMAI GTCTC 3 cut(s) 504, 972, 1078
BstMBI GATC 6 cut(s) 11, 454, 706, 1044, 1309, 1388
BstMWI GCNNNNNNNGC 6 cut(s) 49, 97, 348, 652, 890, 1423
BstNSI RCATGY 2 cut(s) 850, 1342
BstPI GGTNACC 1 cut(s) 1268
BstSFI CTRYAG 1 cut(s) 122
BstUI CGCG 2 cut(s) 118, 729
BstV1I GCAGC 8 cut(s) 20, 108, 355, 642, 863, 1067, 1090, 1174
BstV2I GAAGAC 1 cut(s) 538
BstX2I RGATCY 3 cut(s) 11, 1044, 1388
BstYI RGATCY 3 cut(s) 11, 1044, 1388
Bsu36I CCTNAGG 1 cut(s) 1479
BsuI GTATCC 1 cut(s) 690
BsuRI GGCC 1 cut(s) 452
BtgI CCRYGG 1 cut(s) 1525
BtsIMutI CAGTG 1 cut(s) 503
BveI ACCTGC 1 cut(s) 115
Cac8I GCNNGC 5 cut(s) 102, 366, 644, 852, 1017
CaiI CAGNNNCTG 2 cut(s) 628, 745
CciI TCATGA 1 cut(s) 1396
CfoI GCGC 2 cut(s) 100, 745
Cfr10I RCCGGY 2 cut(s) 70, 100
Cfr13I GGNCC 2 cut(s) 450, 809
CseI GACGC 2 cut(s) 51, 124
Csp6I GTAC 1 cut(s) 867
CviAII CATG 9 cut(s) 26, 339, 382, 847, 872, 1249, 1339, 1397, 1495
CviQI GTAC 1 cut(s) 867
DinI GGCGCC 1 cut(s) 99
DpnI GATC 6 cut(s) 13, 456, 708, 1046, 1311, 1390
DpnII GATC 6 cut(s) 11, 454, 706, 1044, 1309, 1388
DraI TTTAAA 3 cut(s) 405, 1291, 1347
Eam1104I CTCTTC 4 cut(s) 297, 951, 956, 1140
EarI CTCTTC 4 cut(s) 297, 951, 956, 1140
EciI GGCGGA 1 cut(s) 273
Ecl136II GAGCTC 1 cut(s) 901
Eco130I CCWWGG 2 cut(s) 926, 1544
Eco24I GRGCYC 1 cut(s) 903
Eco31I GGTCTC 1 cut(s) 972
Eco32I GATATC 1 cut(s) 240
Eco47I GGWCC 1 cut(s) 809
Eco53kI GAGCTC 1 cut(s) 901
Eco57I CTGAAG 4 cut(s) 695, 767, 906, 975
Eco81I CCTNAGG 1 cut(s) 1479
Eco88I CYCGRG 1 cut(s) 575
Eco91I GGTNACC 1 cut(s) 1268
EcoICRI GAGCTC 1 cut(s) 901
EcoO109I RGGNCCY 1 cut(s) 809
EcoO65I GGTNACC 1 cut(s) 1268
EcoRV GATATC 1 cut(s) 240
EcoT14I CCWWGG 2 cut(s) 926, 1544
EcoT22I ATGCAT 2 cut(s) 922, 1344
EcoT38I GRGCYC 1 cut(s) 903
EgeI GGCGCC 1 cut(s) 99
EheI GGCGCC 1 cut(s) 99
ErhI CCWWGG 2 cut(s) 926, 1544
Esp3I CGTCTC 1 cut(s) 504
FaeI CATG 9 cut(s) 29, 342, 385, 850, 875, 1252, 1342, 1400, 1498
FaqI GGGAC 5 cut(s) 822, 1091, 1214, 1366, 1425
FatI CATG 9 cut(s) 25, 338, 381, 846, 871, 1248, 1338, 1396, 1494
FauI CCCGC 1 cut(s) 268
FriOI GRGCYC 1 cut(s) 903
FspBI CTAG 3 cut(s) 459, 1307, 1545
GlaI GCGC 2 cut(s) 99, 744
HaeII RGCGCY 2 cut(s) 101, 746
HaeIII GGCC 1 cut(s) 452
HapII CCGG 3 cut(s) 71, 95, 101
HgaI GACGC 2 cut(s) 51, 124
HhaI GCGC 2 cut(s) 100, 745
Hin1I GRCGYC 1 cut(s) 98
Hin1II CATG 9 cut(s) 29, 342, 385, 850, 875, 1252, 1342, 1400, 1498
Hin6I GCGC 2 cut(s) 98, 743
HinP1I GCGC 2 cut(s) 98, 743
HindIII AAGCTT 4 cut(s) 41, 89, 151, 1256
HinfI GANTC 9 cut(s) 76, 205, 256, 355, 500, 625, 767, 1168, 1354
HpaII CCGG 3 cut(s) 71, 95, 101
HphI GGTGA 4 cut(s) 85, 397, 1073, 1262
Hpy166II GTNNAC 2 cut(s) 753, 1541
Hpy188I TCNGA 9 cut(s) 16, 237, 521, 530, 714, 955, 987, 1167, 1314
Hpy188III TCNNGA 8 cut(s) 425, 577, 617, 704, 800, 817, 1397, 1481
Hpy8I GTNNAC 2 cut(s) 753, 1541
Hpy99I CGWCG 3 cut(s) 52, 67, 70
HpyAV CCTTC 2 cut(s) 1120, 1259
HpyCH4III ACNGT 5 cut(s) 141, 391, 909, 1274, 1432
HpyF10VI GCNNNNNNNGC 6 cut(s) 49, 97, 348, 652, 890, 1423
Hsp92I GRCGYC 1 cut(s) 98
Hsp92II CATG 9 cut(s) 29, 342, 385, 850, 875, 1252, 1342, 1400, 1498
HspAI GCGC 2 cut(s) 98, 743
KasI GGCGCC 1 cut(s) 97
KroI GCCGGC 1 cut(s) 100
KroNI GCCGGC 1 cut(s) 102
Kzo9I GATC 6 cut(s) 11, 454, 706, 1044, 1309, 1388
LmnI GCTCC 1 cut(s) 898
Lsp1109I GCAGC 8 cut(s) 20, 108, 355, 642, 863, 1067, 1090, 1174
LweI GCATC 3 cut(s) 570, 835, 1308
MaeI CTAG 3 cut(s) 459, 1307, 1545
MaeIII GTNAC 6 cut(s) 377, 385, 776, 817, 1268, 1529
MalI GATC 6 cut(s) 13, 456, 708, 1046, 1311, 1390
MbiI CCGCTC 1 cut(s) 263
MboI GATC 6 cut(s) 11, 454, 706, 1044, 1309, 1388
MboII GAAGA 9 cut(s) 266, 284, 543, 701, 899, 968, 973, 1127, 1416
MfeI CAATTG 1 cut(s) 691
MflI RGATCY 3 cut(s) 11, 1044, 1388
MhlI GDGCHC 2 cut(s) 149, 903
Mly113I GGCGCC 1 cut(s) 98
MlyI GAGTC 3 cut(s) 214, 776, 1348
MmeI TCCRAC 1 cut(s) 246
Mph1103I ATGCAT 2 cut(s) 922, 1344
MreI CGCCGGCG 1 cut(s) 100
MroNI GCCGGC 1 cut(s) 100
MroXI GAANNNNTTC 2 cut(s) 624, 1134
MslI CAYNNNNRTG 1 cut(s) 1347
MspA1I CMGCKG 3 cut(s) 33, 884, 1058
MspCI CTTAAG 1 cut(s) 1534
MspI CCGG 3 cut(s) 71, 95, 101
MunI CAATTG 1 cut(s) 691
MvnI CGCG 2 cut(s) 118, 729
MwoI GCNNNNNNNGC 6 cut(s) 49, 97, 348, 652, 890, 1423
NaeI GCCGGC 1 cut(s) 102
NarI GGCGCC 1 cut(s) 98
NdeII GATC 6 cut(s) 11, 454, 706, 1044, 1309, 1388
NgoMIV GCCGGC 1 cut(s) 100
NlaIII CATG 9 cut(s) 29, 342, 385, 850, 875, 1252, 1342, 1400, 1498
NlaIV GGNNCC 2 cut(s) 99, 810
NmeAIII GCCGAG 3 cut(s) 78, 376, 919
NmuCI GTSAC 4 cut(s) 377, 385, 817, 1268
NsiI ATGCAT 2 cut(s) 922, 1344
NspI RCATGY 2 cut(s) 850, 1342
PaeR7I CTCGAG 1 cut(s) 575
PagI TCATGA 1 cut(s) 1396
PaqCI CACCTGC 1 cut(s) 115
PdiI GCCGGC 1 cut(s) 102
PdmI GAANNNNTTC 2 cut(s) 624, 1134
PfeI GAWTC 6 cut(s) 76, 256, 355, 500, 625, 1168
PflFI GACNNNGTC 1 cut(s) 515
PleI GAGTC 3 cut(s) 213, 775, 1348
PluTI GGCGCC 1 cut(s) 101
PpsI GAGTC 3 cut(s) 213, 775, 1348
PpuMI RGGWCCY 1 cut(s) 809
PshBI ATTAAT 1 cut(s) 1007
Psp124BI GAGCTC 1 cut(s) 903
Psp5II RGGWCCY 1 cut(s) 809
PspEI GGTNACC 1 cut(s) 1268
PspN4I GGNNCC 2 cut(s) 99, 810
PspPI GGNCC 2 cut(s) 450, 809
PspPPI RGGWCCY 1 cut(s) 809
PsrI GAACNNNNNNTAC 2 cut(s) 1377, 1409
PstI CTGCAG 1 cut(s) 126
PstNI CAGNNNCTG 2 cut(s) 628, 745
PsuI RGATCY 3 cut(s) 11, 1044, 1388
PsyI GACNNNGTC 1 cut(s) 515
PvuII CAGCTG 2 cut(s) 884, 1058
RsaI GTAC 1 cut(s) 868
RsaNI GTAC 1 cut(s) 867
RseI CAYNNNNRTG 1 cut(s) 1347
SacI GAGCTC 1 cut(s) 903
Sau3AI GATC 6 cut(s) 11, 454, 706, 1044, 1309, 1388
Sau96I GGNCC 2 cut(s) 450, 809
SchI GAGTC 3 cut(s) 214, 776, 1348
SduI GDGCHC 2 cut(s) 149, 903
SfaNI GCATC 3 cut(s) 570, 835, 1308
SfcI CTRYAG 1 cut(s) 122
SfoI GGCGCC 1 cut(s) 99
Sfr274I CTCGAG 1 cut(s) 575
SgrAI CRCCGGYG 2 cut(s) 70, 100
SinI GGWCC 1 cut(s) 809
SlaI CTCGAG 1 cut(s) 575
SmiI ATTTAAAT 1 cut(s) 1347
SmiMI CAYNNNNRTG 1 cut(s) 1347
SmlI CTYRAG 4 cut(s) 148, 575, 969, 1534
SmoI CTYRAG 4 cut(s) 148, 575, 969, 1534
SsiI CCGC 9 cut(s) 31, 118, 188, 209, 261, 284, 287, 1094, 1208
SspDI GGCGCC 1 cut(s) 97
SspMI CTAG 3 cut(s) 459, 1307, 1545
SstI GAGCTC 1 cut(s) 903
StyI CCWWGG 2 cut(s) 926, 1544
SwaI ATTTAAAT 1 cut(s) 1347
TaaI ACNGT 5 cut(s) 141, 391, 909, 1274, 1432
TaqI TCGA 3 cut(s) 576, 618, 1326
TatI WGTACW 1 cut(s) 866
TauI GCSGC 2 cut(s) 121, 289
TfiI GAWTC 6 cut(s) 76, 256, 355, 500, 625, 1168
TscAI CASTG 1 cut(s) 510
TseFI GTSAC 4 cut(s) 377, 385, 817, 1268
TseI GCWGC 8 cut(s) 33, 121, 368, 655, 876, 1055, 1103, 1187
Tsp45I GTSAC 4 cut(s) 377, 385, 817, 1268
TspDTI ATGAA 6 cut(s) 124, 327, 484, 618, 1164, 1385
TspGWI ACGGA 2 cut(s) 36, 1381
TspRI CASTG 1 cut(s) 510
Tth111I GACNNNGTC 1 cut(s) 515
Vha464I CTTAAG 1 cut(s) 1534
VpaK11BI GGWCC 1 cut(s) 809
VspI ATTAAT 1 cut(s) 1007
XceI RCATGY 2 cut(s) 850, 1342
XhoI CTCGAG 1 cut(s) 575
XmaJI CCTAGG 1 cut(s) 1544
XmnI GAANNNNTTC 2 cut(s) 624, 1134
XspI CTAG 3 cut(s) 459, 1307, 1545
Zsp2I ATGCAT 2 cut(s) 922, 1344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.