Prupe.4G176200_v2.0.a1

ethylene-responsive transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
10435004 .. 10436194
1191 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G176200.1

Sequence Viewer

Length: 687 bp
ATGGCTCCGACGTCGCCCAAGTCTCCAACCAAATCCGGCTCCGAAATCCCGAGCCCAAACTCCAAAGAGATCCGGTACCGCGGTGTCCGTAAGAGGCCCTGGGGCCGCTACGCCGCCGAGATCAGAGATCCCGGGAAGAAGACGCGCGTCTGGCTCGGGACCTTCGACACTGCCGAGGAGGCAGCGCGTGCCTATGACAAAGCGGCGCGTGAGTTCCGCGGGGCCAAGGCGAAGACTAACTTCCCCACCCCCGCTGAGCTCCAGCTCGAGGCCGCTGCCAACATCAACAGCCACAACAACAACGTGCCGAAGGCTGCCGCGGCAAACAACAGCCCCAGCCAGAGCAGCACCGTTGAGTCCTCGTCCCCGCCGCCGCCTCCGCTGGACCTCGCTCTAGCGCCCCATTTCGCTGCCGGCGGCGGCTACTTCACCGCCGCGAGTGGCTTCCGCGCGGTCCCCGTGGCGCGTCCCGTGCTCTTCTTCGACGCCTTCGCACGTGCGGAGAACGCCGCCGCCCTCCAGCGCGCTCGCGAAATGTGCAGGTTCGAGCGTGCGGTTGTAGCTCCCTCCTCCGGCGGGGCCCACAGCGACTCGTCCTCGTCCTCGGTGGTGGATTTCGATCGCAGCCTTCCCAACGGACGGCTCGATCTCGACCTCAACCTCCCTCCACCATCGGAAGTCGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000160 GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009682 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009873 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010104 GO:0010105 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0010648 GO:0016604 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0031349 GO:0031974 GO:0031981 GO:0032870 GO:0033993 GO:0035556 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0045892 GO:0045934 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070297 GO:0070298 GO:0070887 GO:0071229 GO:0071310 GO:0071369 GO:0071395 GO:0071495 GO:0080090 GO:0080134 GO:0097159 GO:0097305 GO:0098542 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

229

Amino Acids

24.24

Weight (kDa)

9.62

Isoelectric Point (pI)

62.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 14
Acc36I ACCTGC 1 cut(s) 531
Acc65I GGTACC 1 cut(s) 75
AccB1I GGYRCC 1 cut(s) 75
AclWI GGATC 2 cut(s) 64, 122
AcvI CACGTG 1 cut(s) 497
AcyI GRCGYC 2 cut(s) 11, 486
AfaI GTAC 1 cut(s) 77
AfiI CCNNNNNNNGG 4 cut(s) 268, 572, 576, 639
AjnI CCWGG 1 cut(s) 98
AluBI AGCT 3 cut(s) 259, 265, 563
AluI AGCT 3 cut(s) 259, 265, 563
Alw21I GWGCWC 2 cut(s) 261, 477
Alw26I GTCTC 1 cut(s) 27
AlwI GGATC 2 cut(s) 64, 122
Ama87I CYCGRG 4 cut(s) 49, 131, 155, 266
AoxI GGCC 5 cut(s) 95, 103, 222, 270, 579
ApaI GGGCCC 1 cut(s) 583
ApeKI GCWGC 6 cut(s) 182, 275, 314, 345, 410, 624
Asp718I GGTACC 1 cut(s) 75
AspLEI GCGC 8 cut(s) 147, 187, 208, 400, 452, 466, 525, 527
AspS9I GGNCC 8 cut(s) 96, 103, 159, 222, 385, 454, 579, 580
AsuC2I CCSGG 2 cut(s) 132, 133
AsuHPI GGTGA 1 cut(s) 421
AvaI CYCGRG 4 cut(s) 49, 131, 155, 266
AvaII GGWCC 3 cut(s) 159, 385, 454
BaeGI GKGCMC 1 cut(s) 583
BaeI ACNNNNGTAYC 2 cut(s) 67, 100
BanI GGYRCC 1 cut(s) 75
BanII GRGCYC 3 cut(s) 56, 261, 583
BbrPI CACGTG 1 cut(s) 497
BbsI GAAGAC 2 cut(s) 146, 239
Bbv12I GWGCWC 2 cut(s) 261, 477
BbvI GCAGC 6 cut(s) 194, 262, 301, 357, 397, 636
BccI CCATC 1 cut(s) 679
BceAI ACGGC 1 cut(s) 656
BcgI CGANNNNNNTGC 2 cut(s) 257, 291
BciT130I CCWGG 1 cut(s) 100
BcnI CCSGG 2 cut(s) 132, 133
BcoDI GTCTC 1 cut(s) 27
BfaI CTAG 1 cut(s) 395
BfoI RGCGCY 1 cut(s) 401
BfuAI ACCTGC 1 cut(s) 531
BglI GCCNNNNNGGC 1 cut(s) 179
BlpI GCTNAGC 1 cut(s) 255
Bme1390I CCNGG 3 cut(s) 100, 132, 133
Bme18I GGWCC 3 cut(s) 159, 385, 454
BmeT110I CYCGRG 4 cut(s) 49, 131, 155, 266
BmgT120I GGNCC 8 cut(s) 96, 103, 159, 222, 385, 454, 579, 580
BmiI GGNNCC 9 cut(s) 6, 40, 77, 104, 160, 223, 456, 580, 581
BmrFI CCNGG 3 cut(s) 100, 132, 133
BoxI GACNNNNGTC 1 cut(s) 146
BpiI GAAGAC 2 cut(s) 146, 239
BpmI CTGGAG 2 cut(s) 245, 503
Bpu1102I GCTNAGC 1 cut(s) 255
BpuMI CCSGG 2 cut(s) 132, 133
BsaAI YACGTR 1 cut(s) 497
BsaBI GATNNNNATC 1 cut(s) 618
BsaHI GRCGYC 2 cut(s) 11, 486
BsaWI WCCGGW 1 cut(s) 72
Bsc4I CCNNNNNNNGG 4 cut(s) 268, 572, 576, 639
Bse118I RCCGGY 1 cut(s) 413
Bse8I GATNNNNATC 1 cut(s) 618
BseBI CCWGG 1 cut(s) 100
BseJI GATNNNNATC 1 cut(s) 618
BseLI CCNNNNNNNGG 4 cut(s) 268, 572, 576, 639
BseMII CTCAG 1 cut(s) 246
BsePI GCGCGC 1 cut(s) 523
BseRI GAGGAG 2 cut(s) 191, 559
BseSI GKGCMC 1 cut(s) 583
BseXI GCAGC 6 cut(s) 194, 262, 301, 357, 397, 636
BseYI CCCAGC 1 cut(s) 335
BsgI GTGCAG 1 cut(s) 559
Bsh1285I CGRYCG 1 cut(s) 622
BshFI GGCC 5 cut(s) 97, 105, 224, 272, 581
BshNI GGYRCC 1 cut(s) 75
BsiEI CGRYCG 1 cut(s) 622
BsiHKAI GWGCWC 2 cut(s) 261, 477
BsiHKCI CYCGRG 4 cut(s) 49, 131, 155, 266
BsiSI CCGG 5 cut(s) 36, 73, 132, 414, 573
BslFI GGGAC 4 cut(s) 172, 349, 440, 453
BslI CCNNNNNNNGG 4 cut(s) 268, 572, 576, 639
BsmAI GTCTC 1 cut(s) 27
BsmFI GGGAC 4 cut(s) 172, 349, 440, 453
BsnI GGCC 5 cut(s) 97, 105, 224, 272, 581
BsoBI CYCGRG 4 cut(s) 49, 131, 155, 266
Bsp120I GGGCCC 1 cut(s) 579
Bsp1286I GDGCHC 4 cut(s) 56, 261, 477, 583
Bsp143I GATC 5 cut(s) 69, 120, 127, 619, 646
Bsp1720I GCTNAGC 1 cut(s) 255
Bsp68I TCGCGA 1 cut(s) 531
BspANI GGCC 5 cut(s) 97, 105, 224, 272, 581
BspCNI CTCAG 1 cut(s) 247
BspLI GGNNCC 9 cut(s) 6, 40, 77, 104, 160, 223, 456, 580, 581
BspMI ACCTGC 1 cut(s) 531
BspPI GGATC 2 cut(s) 64, 122
BspQI GCTCTTC 1 cut(s) 482
BspT107I GGYRCC 1 cut(s) 75
BsrFI RCCGGY 1 cut(s) 413
BssAI RCCGGY 1 cut(s) 413
BssHII GCGCGC 1 cut(s) 523
BssMI GATC 5 cut(s) 69, 120, 127, 619, 646
BssNI GRCGYC 2 cut(s) 11, 486
BssT1I CCWWGG 1 cut(s) 225
Bst2UI CCWGG 1 cut(s) 100
Bst4CI ACNGT 1 cut(s) 352
Bst6I CTCTTC 1 cut(s) 482
BstACI GRCGYC 2 cut(s) 11, 486
BstAPI GCANNNNNTGC 1 cut(s) 188
BstBAI YACGTR 1 cut(s) 497
BstC8I GCNNGC 5 cut(s) 189, 415, 525, 529, 552
BstDEI CTNAG 1 cut(s) 255
BstDSI CCRYGG 4 cut(s) 79, 217, 318, 459
BstH2I RGCGCY 1 cut(s) 401
BstHHI GCGC 8 cut(s) 147, 187, 208, 400, 452, 466, 525, 527
BstKTI GATC 5 cut(s) 72, 123, 130, 622, 649
BstMAI GTCTC 1 cut(s) 27
BstMBI GATC 5 cut(s) 69, 120, 127, 619, 646
BstMCI CGRYCG 1 cut(s) 622
BstNI CCWGG 1 cut(s) 100
BstPAI GACNNNNGTC 1 cut(s) 146
BstSCI CCNGG 3 cut(s) 98, 130, 131
BstSLI GKGCMC 1 cut(s) 583
BstV1I GCAGC 6 cut(s) 194, 262, 301, 357, 397, 636
BstV2I GAAGAC 2 cut(s) 146, 239
BstX2I RGATCY 2 cut(s) 69, 127
BstYI RGATCY 2 cut(s) 69, 127
BsuRI GGCC 5 cut(s) 97, 105, 224, 272, 581
BtgI CCRYGG 4 cut(s) 79, 217, 318, 459
BtsI GCAGTG 1 cut(s) 168
BtsIMutI CAGTG 1 cut(s) 168
BtuMI TCGCGA 1 cut(s) 531
BveI ACCTGC 1 cut(s) 531
Cac8I GCNNGC 5 cut(s) 189, 415, 525, 529, 552
CfoI GCGC 8 cut(s) 147, 187, 208, 400, 452, 466, 525, 527
Cfr10I RCCGGY 1 cut(s) 413
Cfr13I GGNCC 8 cut(s) 96, 103, 159, 222, 385, 454, 579, 580
Cfr42I CCGCGG 3 cut(s) 82, 220, 321
Cfr9I CCCGGG 1 cut(s) 131
CseI GACGC 4 cut(s) 136, 151, 455, 494
Csp6I GTAC 1 cut(s) 76
CviQI GTAC 1 cut(s) 76
DdeI CTNAG 1 cut(s) 255
DpnI GATC 5 cut(s) 71, 122, 129, 621, 648
DpnII GATC 5 cut(s) 69, 120, 127, 619, 646
Eam1104I CTCTTC 1 cut(s) 482
EarI CTCTTC 1 cut(s) 482
Ecl136II GAGCTC 1 cut(s) 259
Eco130I CCWWGG 1 cut(s) 225
Eco24I GRGCYC 3 cut(s) 56, 261, 583
Eco47I GGWCC 3 cut(s) 159, 385, 454
Eco53kI GAGCTC 1 cut(s) 259
Eco72I CACGTG 1 cut(s) 497
Eco88I CYCGRG 4 cut(s) 49, 131, 155, 266
EcoICRI GAGCTC 1 cut(s) 259
EcoO109I RGGNCCY 3 cut(s) 96, 159, 579
EcoRII CCWGG 1 cut(s) 98
EcoT14I CCWWGG 1 cut(s) 225
EcoT38I GRGCYC 3 cut(s) 56, 261, 583
ErhI CCWWGG 1 cut(s) 225
FaiI YATR 1 cut(s) 195
FalI AAGNNNNNCTT 2 cut(s) 224, 256
FaqI GGGAC 4 cut(s) 172, 349, 440, 453
FauI CCCGC 4 cut(s) 212, 259, 375, 569
FriOI GRGCYC 3 cut(s) 56, 261, 583
FspBI CTAG 1 cut(s) 395
GlaI GCGC 8 cut(s) 146, 186, 207, 399, 451, 465, 524, 526
GsaI CCCAGC 1 cut(s) 339
GsuI CTGGAG 2 cut(s) 245, 503
HaeII RGCGCY 1 cut(s) 401
HaeIII GGCC 5 cut(s) 97, 105, 224, 272, 581
HapII CCGG 5 cut(s) 36, 73, 132, 414, 573
HgaI GACGC 4 cut(s) 136, 151, 455, 494
HhaI GCGC 8 cut(s) 147, 187, 208, 400, 452, 466, 525, 527
Hin1I GRCGYC 2 cut(s) 11, 486
Hin6I GCGC 8 cut(s) 145, 185, 206, 398, 450, 464, 523, 525
HinP1I GCGC 8 cut(s) 145, 185, 206, 398, 450, 464, 523, 525
HinfI GANTC 2 cut(s) 356, 590
HpaII CCGG 5 cut(s) 36, 73, 132, 414, 573
HphI GGTGA 1 cut(s) 421
Hpy188I TCNGA 4 cut(s) 9, 43, 125, 676
Hpy188III TCNNGA 4 cut(s) 49, 157, 530, 650
Hpy99I CGWCG 3 cut(s) 13, 16, 488
HpyAV CCTTC 4 cut(s) 172, 304, 499, 638
HpyCH4III ACNGT 1 cut(s) 352
HpyCH4IV ACGT 3 cut(s) 11, 303, 496
HpyCH4V TGCA 1 cut(s) 540
HpyF3I CTNAG 1 cut(s) 255
HpySE526I ACGT 3 cut(s) 11, 303, 496
Hsp92I GRCGYC 2 cut(s) 11, 486
HspAI GCGC 8 cut(s) 145, 185, 206, 398, 450, 464, 523, 525
KpnI GGTACC 1 cut(s) 79
KroI GCCGGC 1 cut(s) 413
KroNI GCCGGC 1 cut(s) 415
KspI CCGCGG 3 cut(s) 82, 220, 321
Kzo9I GATC 5 cut(s) 69, 120, 127, 619, 646
LguI GCTCTTC 1 cut(s) 482
LmnI GCTCC 4 cut(s) 10, 44, 264, 568
Lsp1109I GCAGC 6 cut(s) 194, 262, 301, 357, 397, 636
MaeI CTAG 1 cut(s) 395
MaeII ACGT 3 cut(s) 11, 303, 496
MalI GATC 5 cut(s) 71, 122, 129, 621, 648
MboI GATC 5 cut(s) 69, 120, 127, 619, 646
MboII GAAGA 5 cut(s) 148, 151, 244, 469, 472
MflI RGATCY 2 cut(s) 69, 127
MhlI GDGCHC 4 cut(s) 56, 261, 477, 583
MlyI GAGTC 2 cut(s) 365, 584
MmeI TCCRAC 2 cut(s) 32, 50
MroNI GCCGGC 1 cut(s) 413
MspA1I CMGCKG 6 cut(s) 81, 219, 254, 275, 320, 382
MspI CCGG 5 cut(s) 36, 73, 132, 414, 573
MspR9I CCNGG 3 cut(s) 100, 132, 133
MvaI CCWGG 1 cut(s) 100
NaeI GCCGGC 1 cut(s) 415
NciI CCSGG 2 cut(s) 132, 133
NdeII GATC 5 cut(s) 69, 120, 127, 619, 646
NgoMIV GCCGGC 1 cut(s) 413
NlaIV GGNNCC 9 cut(s) 6, 40, 77, 104, 160, 223, 456, 580, 581
NmeAIII GCCGAG 2 cut(s) 142, 199
NruI TCGCGA 1 cut(s) 531
PaeR7I CTCGAG 1 cut(s) 266
PasI CCCWGGG 1 cut(s) 99
PauI GCGCGC 1 cut(s) 523
PciSI GCTCTTC 1 cut(s) 482
PcsI WCGNNNNNNNCGW 3 cut(s) 162, 171, 642
PdiI GCCGGC 1 cut(s) 415
Ple19I CGATCG 1 cut(s) 622
PleI GAGTC 2 cut(s) 364, 584
PmaCI CACGTG 1 cut(s) 497
PmlI CACGTG 1 cut(s) 497
PpsI GAGTC 2 cut(s) 364, 584
Ppu21I YACGTR 1 cut(s) 497
PpuMI RGGWCCY 1 cut(s) 159
PshAI GACNNNNGTC 1 cut(s) 146
Psp124BI GAGCTC 1 cut(s) 261
Psp5II RGGWCCY 1 cut(s) 159
Psp6I CCWGG 1 cut(s) 98
PspCI CACGTG 1 cut(s) 497
PspFI CCCAGC 1 cut(s) 335
PspGI CCWGG 1 cut(s) 98
PspN4I GGNNCC 9 cut(s) 6, 40, 77, 104, 160, 223, 456, 580, 581
PspOMI GGGCCC 1 cut(s) 579
PspPI GGNCC 8 cut(s) 96, 103, 159, 222, 385, 454, 579, 580
PspPPI RGGWCCY 1 cut(s) 159
PspXI VCTCGAGB 1 cut(s) 266
PsuI RGATCY 2 cut(s) 69, 127
PteI GCGCGC 1 cut(s) 523
PvuI CGATCG 1 cut(s) 622
RruI TCGCGA 1 cut(s) 531
RsaI GTAC 1 cut(s) 77
RsaNI GTAC 1 cut(s) 76
SacI GAGCTC 1 cut(s) 261
SacII CCGCGG 3 cut(s) 82, 220, 321
SapI GCTCTTC 1 cut(s) 482
Sau3AI GATC 5 cut(s) 69, 120, 127, 619, 646
Sau96I GGNCC 8 cut(s) 96, 103, 159, 222, 385, 454, 579, 580
SchI GAGTC 2 cut(s) 365, 584
ScrFI CCNGG 3 cut(s) 100, 132, 133
SduI GDGCHC 4 cut(s) 56, 261, 477, 583
Sfr274I CTCGAG 1 cut(s) 266
Sfr303I CCGCGG 3 cut(s) 82, 220, 321
SgrBI CCGCGG 3 cut(s) 82, 220, 321
SinI GGWCC 3 cut(s) 159, 385, 454
SlaI CTCGAG 1 cut(s) 266
SmaI CCCGGG 1 cut(s) 133
SmlI CTYRAG 1 cut(s) 266
SmoI CTYRAG 1 cut(s) 266
SspMI CTAG 1 cut(s) 395
SstI GAGCTC 1 cut(s) 261
StyD4I CCNGG 3 cut(s) 98, 130, 131
StyI CCWWGG 1 cut(s) 225
TaaI ACNGT 1 cut(s) 352
TaiI ACGT 3 cut(s) 14, 306, 499
TaqI TCGA 7 cut(s) 165, 267, 483, 546, 618, 645, 651
TscAI CASTG 1 cut(s) 175
TseI GCWGC 6 cut(s) 182, 275, 314, 345, 410, 624
TspGWI ACGGA 2 cut(s) 77, 651
TspMI CCCGGG 1 cut(s) 131
TspRI CASTG 1 cut(s) 175
VpaK11BI GGWCC 3 cut(s) 159, 385, 454
XhoI CTCGAG 1 cut(s) 266
XmaI CCCGGG 1 cut(s) 131
XspI CTAG 1 cut(s) 395
ZraI GACGTC 1 cut(s) 12
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.