Rorug05G0133300

ethylene-responsive transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0003786
Physical Location & Seq
Forward (+)
11908567 .. 11914474
5908 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0133300.1

Sequence Viewer

Length: 2655 bp
ATGGAATTGTCAAATGGGCAAGTGGGGTTCTCTAATTTTCAAAGCAATGGGATTTTGGCTACGAATTGTAGCCCAAAGCCATTTCCTTTATCTGGGTTTTTGATTTGTGGGAGAACCATTTTCGGCATTGGCTTAGAGGAGAAGAATGTGAAGAAGAGTCGGGTTTCTGGTATTAGAACATTGAACCGTGGAACTGTAATTAGTGCTTTGGCGAAGGAAGGGACTGATAACCGATCAGTTGGTAGTGAAATTCTGGAGAAAGATTTTGAATTTAAGCCATCGTTTGATCAATGCTTGAAGGTTATGGGGTCTGTTAAGCTTAGAAGTGACAAAGATAAGAGCAGCCGGCCAAAAGAAGATAATCCAAAGCATAATATGAGGAATAGAAATGTTTCCAGAAGACAGTTGTCTGAGGCAAATGAAGAGCGTGTAAAATCGGGGGAGTCTGAAAGGCAATTGGATCGAGGGAATGTGTCAAAAGTTGCGAAACTATATGAAAATGCTAATGGAACCACGGAACAAAGCAAAAGGCTACGAGTTAGAGGATATAAGGATGATTATGATAGCAGGCAGAGTGACATGGATGAAAAGGAAAAGATGAAGATAAGGGGAGATACAAGTAATGGAAAATGGTCGAGATATACTGGTAGACCAGAACAAGAATTGGACTTCAACTCAGGAAAGGGTGCATTGGCACGAAATGCTAAAGAAAGCCCAAGAGATTACAAGTCAACTGGTCAAGACTTTGAGAGAAGGAAAAGTGATGTTAGAAGTGAAGATGGATTTGAGAGGTACCGCATCAGTGCTGAGAAAGCCACTGATAATAGAGCTTTCTCTCCTAGAAGTGGAAATTCAACCAAGAACGGAAGAGATTTCCCTAGGAGAGACTATGATGAAAGAGCTGCATTTAAGAATTTTGATGAATTCAGTGATATTATGGACAAGCCACGAGTTTCACAAATGCAAATGGAGGAGAGAATCCAGAAGCTAGCAAAATCGCTGAATGGTGCAAACATTGACATGCCTGAGTGGATGTTTTCAAAGATGATGCGAAGTGCACAAATCAGATTCACAGATCATTCAATACTTAGAGTTATTCAGATATTAGGAAAATTCGGAAACTGGAGACGAGTGTTACAAGTCATTGAGTGGCTTCAAATGCGTGAGCGCTTCAAATCTCACAAGCTCAGATACATATATACAACTGCTCTCGATGTACTTGGAAAGGCAAGGAGACCTGTGGAGGCACTAAATGTATTTCATGCAATGCTGCAACAACTATCATCATATCCTGACTTGGTAGCTTATCATTCCATTGCCATTACTCTTGGACAAGCGGGCCATATGAAAGAACTATTTGATGTGATTGATACTATGCGGTCTCCTCCCAAGAAGAAGTTCAAGACTGGAGCACTTGGGAAGTGGGATCCTCGGTTGGAACCAGATGTCATTGTCTACAATGCAGTACTAAATGCTTGTGTTCAGCGGAAACAATGGGAAGGAGCATTTTGGGTTTTGGAGCAGTTAAAGAAACAAGGTGTGCAGCCTGCCACTACAACATATGGACTTGTCATGGAGGTGATGTTTGCATGTGGCAAGTACAATTTGGTTCACGAGTTTTTTAAGAAGATGCAGAAATCTTCTATACCAAATGCTTTAACTTACAGAGTTATTGTGAATACTCTTTGGAGAGAAGATAAAATAGACGAGGCTGTACAGACTGTTCACAATTTGGAAAGACGAGGAATAGTAGGTTCTGCAGCTCTTTATTATGACTTCGCTCGATGTCTTTGTAGTGCTGGAAGGTGTCAAGAAGCACTAATGCAGATTGAGAAGATATGTAAGGTTGCAAATAAGCCTTTAGTAGTGACTTACACTGGTTTAATTCAAGCTTGTTTGGATGCTGGAAGCATTGAAAATGGGGCATATGTCTTCAACCAAATGGAGAACTTCTGTTCCCCAAATCTGGTCACTTGCAACATAATGCTGAAAGGCTACTTGGACCATGGGATGTATGAAGAAGCAAAACAGCTGTTCCAAAAGATGTTGGAAGATGGGTACAATATCAGCAGCAAATCTGGTTATGAGCTGCGGGTGACACCGGATATCTATACATTCAACACTTTGTTAGAAGCATGCATCACAGAGAAAAGGTGGGATGATTTTGAGTCTTTCTACAAAAGGATGCTGCAAAGTGGATATAACTTCAATATTAAACGACATCTTCGGATGATATTGGATGCTTGCAAAGCAGGAAAGGGTGAGCTACTGGATATAACCTGGGTGCACTTGACCGAGGCAGACCGAATTCCACCCCCTGCTCTCATCAAGGAAAGGTTTTGCAAAAAGCTGGAGGAAGATAACTATTCTGTTGCTATCTCCTGCATTGCCAGAACGAATCCCAATGATCTGCAGGCATTCTCAAAGACAGCATGGTTGAATTTGTTCAAGGAAAATGCAGAAAGGTTTCAGAAAGACACTCTTCTGCAGTTAGTTCGTGAGGTTAGCATTCTTACTGTCAAAAGTGATGTGGCGAACCCTGTATTTGAAAACCTTATGACGTGTTGTAGAGAACTTGATAGAGCTGGTGTGAGGACAGGTGACTTTAAACCAAATGAAAGTGTATGTACTGTTCAAACTGAACCAGCTTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000160 GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009682 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009753 GO:0009755 GO:0009864 GO:0009867 GO:0009873 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010104 GO:0010105 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0010646 GO:0010648 GO:0016604 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0031349 GO:0031974 GO:0031981 GO:0032870 GO:0033993 GO:0035556 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0045892 GO:0045934 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070297 GO:0070298 GO:0070887 GO:0071229 GO:0071310 GO:0071369 GO:0071395 GO:0071495 GO:0080090 GO:0080134 GO:0097159 GO:0097305 GO:0098542 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AP2

Protein Analysis

884

Amino Acids

101.37

Weight (kDa)

9.14

Isoelectric Point (pI)

41.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 479 - 528 2e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 481 - 525 2.1e-08 PPR repeat family
PPR_2 PF13041 654 - 690 1.3e-07 PPR repeat family
PPR PF01535 657 - 686 1.5e-07 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 792
AccB1I GGYRCC 1 cut(s) 792
AccI GTMKAC 2 cut(s) 649, 1455
AciI CCGC 5 cut(s) 796, 1337, 1378, 1486, 2092
AclWI GGATC 3 cut(s) 468, 1421, 1434
AcoI YGGCCR 1 cut(s) 347
AcsI RAATTY 8 cut(s) 249, 269, 850, 913, 923, 1112, 2307, 2440
AfaI GTAC 7 cut(s) 794, 1218, 1467, 1601, 1716, 2060, 2629
AfeI AGCGCT 1 cut(s) 1169
AfiI CCNNNNNNNGG 3 cut(s) 92, 845, 1966
AflIII ACRYGT 1 cut(s) 2561
AjiI CACGTC 1 cut(s) 2562
AjnI CCWGG 1 cut(s) 2279
AjuI GAANNNNNNNTTGG 4 cut(s) 1382, 1414, 1982, 2014
AloI GAACNNNNNNTCC 2 cut(s) 1940, 1972
Alw21I GWGCWC 3 cut(s) 1060, 1414, 2289
Alw26I GTCTC 4 cut(s) 879, 1120, 1228, 1386
Alw44I GTGCAC 2 cut(s) 1056, 2285
AlwI GGATC 3 cut(s) 468, 1421, 1434
Aor51HI AGCGCT 1 cut(s) 1169
AoxI GGCC 2 cut(s) 347, 1339
ApaLI GTGCAC 2 cut(s) 1056, 2285
ApeKI GCWGC 8 cut(s) 342, 902, 1270, 1543, 1760, 2070, 2089, 2188
ApoI RAATTY 8 cut(s) 249, 269, 850, 913, 923, 1112, 2307, 2440
Asp700I GAANNNNTTC 4 cut(s) 391, 1397, 2444, 2466
Asp718I GGTACC 1 cut(s) 792
AspA2I CCTAGG 1 cut(s) 878
AspLEI GCGC 1 cut(s) 1170
AspS9I GGNCC 2 cut(s) 1339, 2002
AsuHPI GGTGA 4 cut(s) 1591, 2107, 2273, 2612
AsuNHI GCTAGC 1 cut(s) 988
AvaII GGWCC 1 cut(s) 2002
AvrII CCTAGG 1 cut(s) 878
BaeGI GKGCMC 2 cut(s) 1060, 2289
BamHI GGATCC 1 cut(s) 1426
BanI GGYRCC 1 cut(s) 792
BauI CACGAG 2 cut(s) 948, 1613
BbsI GAAGAC 2 cut(s) 406, 1924
Bbv12I GWGCWC 3 cut(s) 1060, 1414, 2289
BbvI GCAGC 8 cut(s) 354, 889, 1257, 1555, 1772, 2076, 2082, 2175
BccI CCATC 3 cut(s) 286, 773, 2048
BcgI CGANNNNNNTGC 4 cut(s) 443, 477, 2477, 2511
BciT130I CCWGG 1 cut(s) 2281
BclI TGATCA 1 cut(s) 286
BcoDI GTCTC 4 cut(s) 879, 1120, 1228, 1386
BfaI CTAG 3 cut(s) 840, 879, 989
BfmI CTRYAG 3 cut(s) 1758, 2411, 2486
BfoI RGCGCY 1 cut(s) 1171
BisI GCNGC 8 cut(s) 343, 903, 1271, 1544, 1761, 2071, 2090, 2189
BlnI CCTAGG 1 cut(s) 878
BlsI GCNGC 8 cut(s) 344, 904, 1272, 1545, 1762, 2072, 2091, 2190
BmcAI AGTACT 1 cut(s) 1467
Bme1390I CCNGG 1 cut(s) 2281
Bme18I GGWCC 1 cut(s) 2002
BmgBI CACGTC 1 cut(s) 2562
BmgT120I GGNCC 2 cut(s) 1339, 2002
BmiI GGNNCC 4 cut(s) 511, 794, 1428, 1440
BmrFI CCNGG 1 cut(s) 2281
BmsI GCATC 7 cut(s) 807, 1038, 1620, 1891, 2148, 2175, 2230
BmtI GCTAGC 1 cut(s) 992
BoxI GACNNNNGTC 1 cut(s) 406
BpiI GAAGAC 2 cut(s) 406, 1924
BpmI CTGGAG 4 cut(s) 275, 1144, 1428, 2372
BsaI GGTCTC 2 cut(s) 1228, 1386
BsaJI CCNNGG 7 cut(s) 187, 513, 878, 1430, 2005, 2280, 2295
BsaWI WCCGGW 1 cut(s) 2101
BsaXI ACNNNNNCTCC 2 cut(s) 1568, 1598
Bsc4I CCNNNNNNNGG 3 cut(s) 92, 845, 1966
Bse118I RCCGGY 1 cut(s) 345
Bse1I ACTGG 6 cut(s) 649, 739, 1127, 1411, 1882, 2274
Bse3DI GCAATG 4 cut(s) 52, 1272, 1314, 2385
BseBI CCWGG 1 cut(s) 2281
BseDI CCNNGG 7 cut(s) 187, 513, 878, 1430, 2005, 2280, 2295
BseGI GGATG 9 cut(s) 559, 589, 1038, 1906, 2016, 2164, 2190, 2235, 2245
BseLI CCNNNNNNNGG 3 cut(s) 92, 845, 1966
BseMI GCAATG 4 cut(s) 52, 1272, 1314, 2385
BseMII CTCAG 5 cut(s) 402, 690, 798, 1017, 1201
BseNI ACTGG 6 cut(s) 649, 739, 1127, 1411, 1882, 2274
BseRI GAGGAG 3 cut(s) 152, 986, 1374
BseSI GKGCMC 2 cut(s) 1060, 2289
BseXI GCAGC 8 cut(s) 354, 889, 1257, 1555, 1772, 2076, 2082, 2175
BsgI GTGCAG 1 cut(s) 1562
BshFI GGCC 2 cut(s) 349, 1341
BshNI GGYRCC 1 cut(s) 792
BsiHKAI GWGCWC 3 cut(s) 1060, 1414, 2289
BsiSI CCGG 2 cut(s) 346, 2102
BslFI GGGAC 1 cut(s) 235
BslI CCNNNNNNNGG 3 cut(s) 92, 845, 1966
BsmAI GTCTC 4 cut(s) 879, 1120, 1228, 1386
BsmBI CGTCTC 1 cut(s) 1120
BsmFI GGGAC 1 cut(s) 235
BsmI GAATGC 2 cut(s) 2417, 2508
BsnI GGCC 2 cut(s) 349, 1341
Bso31I GGTCTC 2 cut(s) 1228, 1386
Bsp1286I GDGCHC 3 cut(s) 1060, 1414, 2289
Bsp1407I TGTACA 1 cut(s) 1714
Bsp143I GATC 6 cut(s) 233, 286, 460, 1075, 1426, 2407
Bsp19I CCATGG 1 cut(s) 2005
BspACI CCGC 5 cut(s) 796, 1337, 1378, 1486, 2092
BspANI GGCC 2 cut(s) 349, 1341
BspCNI CTCAG 5 cut(s) 403, 689, 799, 1018, 1200
BspLI GGNNCC 4 cut(s) 511, 794, 1428, 1440
BspMAI CTGCAG 3 cut(s) 1762, 2415, 2490
BspOI GCTAGC 1 cut(s) 992
BspPI GGATC 3 cut(s) 468, 1421, 1434
BspQI GCTCTTC 1 cut(s) 417
BspT107I GGYRCC 1 cut(s) 792
BspTNI GGTCTC 2 cut(s) 1228, 1386
BsrDI GCAATG 4 cut(s) 52, 1272, 1314, 2385
BsrFI RCCGGY 1 cut(s) 345
BsrGI TGTACA 1 cut(s) 1714
BsrI ACTGG 6 cut(s) 649, 739, 1127, 1411, 1882, 2274
BssAI RCCGGY 1 cut(s) 345
BssECI CCNNGG 7 cut(s) 187, 513, 878, 1430, 2005, 2280, 2295
BssMI GATC 6 cut(s) 233, 286, 460, 1075, 1426, 2407
BssSI CACGAG 2 cut(s) 948, 1613
BssT1I CCWWGG 2 cut(s) 878, 2005
Bst2BI CACGAG 2 cut(s) 948, 1613
Bst2UI CCWGG 1 cut(s) 2281
Bst4CI ACNGT 6 cut(s) 188, 196, 405, 1723, 2518, 2632
Bst6I CTCTTC 4 cut(s) 149, 417, 862, 2487
BstAPI GCANNNNNTGC 1 cut(s) 701
BstAUI TGTACA 1 cut(s) 1714
BstC8I GCNNGC 8 cut(s) 347, 569, 990, 1339, 1548, 2137, 2245, 2415
BstDEI CTNAG 8 cut(s) 133, 320, 411, 676, 807, 1026, 1088, 1187
BstDSI CCRYGG 3 cut(s) 187, 513, 2005
BstF5I GGATG 9 cut(s) 559, 589, 1038, 1906, 2016, 2164, 2190, 2235, 2245
BstH2I RGCGCY 1 cut(s) 1171
BstHHI GCGC 1 cut(s) 1170
BstKTI GATC 6 cut(s) 236, 289, 463, 1078, 1429, 2410
BstMAI GTCTC 4 cut(s) 879, 1120, 1228, 1386
BstMBI GATC 6 cut(s) 233, 286, 460, 1075, 1426, 2407
BstMWI GCNNNNNNNGC 4 cut(s) 701, 812, 1159, 2249
BstNI CCWGG 1 cut(s) 2281
BstNSI RCATGY 3 cut(s) 1024, 1593, 2139
BstPAI GACNNNNGTC 1 cut(s) 406
BstSCI CCNGG 1 cut(s) 2279
BstSFI CTRYAG 3 cut(s) 1758, 2411, 2486
BstSLI GKGCMC 2 cut(s) 1060, 2289
BstV1I GCAGC 8 cut(s) 354, 889, 1257, 1555, 1772, 2076, 2082, 2175
BstV2I GAAGAC 2 cut(s) 406, 1924
BstX2I RGATCY 1 cut(s) 1426
BstYI RGATCY 1 cut(s) 1426
BsuRI GGCC 2 cut(s) 349, 1341
BtgI CCRYGG 3 cut(s) 187, 513, 2005
BtrI CACGTC 1 cut(s) 2562
BtsCI GGATG 9 cut(s) 559, 589, 1038, 1906, 2016, 2164, 2190, 2235, 2245
BtsIMutI CAGTG 4 cut(s) 808, 816, 934, 1875
Cac8I GCNNGC 8 cut(s) 347, 569, 990, 1339, 1548, 2137, 2245, 2415
CfoI GCGC 1 cut(s) 1170
Cfr10I RCCGGY 1 cut(s) 345
Cfr13I GGNCC 2 cut(s) 1339, 2002
Csp6I GTAC 7 cut(s) 793, 1217, 1466, 1600, 1715, 2059, 2628
CviAII CATG 8 cut(s) 580, 1021, 1262, 1573, 1590, 2006, 2136, 2433
CviQI GTAC 7 cut(s) 793, 1217, 1466, 1600, 1715, 2059, 2628
DdeI CTNAG 8 cut(s) 133, 320, 411, 676, 807, 1026, 1088, 1187
DpnI GATC 6 cut(s) 235, 288, 462, 1077, 1428, 2409
DpnII GATC 6 cut(s) 233, 286, 460, 1075, 1426, 2407
DraI TTTAAA 1 cut(s) 2608
EaeI YGGCCR 1 cut(s) 347
Eam1104I CTCTTC 4 cut(s) 149, 417, 862, 2487
EarI CTCTTC 4 cut(s) 149, 417, 862, 2487
Eco130I CCWWGG 2 cut(s) 878, 2005
Eco31I GGTCTC 2 cut(s) 1228, 1386
Eco32I GATATC 1 cut(s) 2107
Eco47I GGWCC 1 cut(s) 2002
Eco47III AGCGCT 1 cut(s) 1169
EcoRI GAATTC 2 cut(s) 923, 2307
EcoRII CCWGG 1 cut(s) 2279
EcoRV GATATC 1 cut(s) 2107
EcoT14I CCWWGG 2 cut(s) 878, 2005
EcoT22I ATGCAT 1 cut(s) 2141
ErhI CCWWGG 2 cut(s) 878, 2005
Esp3I CGTCTC 1 cut(s) 1120
FaeI CATG 8 cut(s) 583, 1024, 1265, 1576, 1593, 2009, 2139, 2436
FalI AAGNNNNNCTT 2 cut(s) 2466, 2498
FaqI GGGAC 1 cut(s) 235
FatI CATG 8 cut(s) 579, 1020, 1261, 1572, 1589, 2005, 2135, 2432
FauI CCCGC 2 cut(s) 1330, 2085
FauNDI CATATG 3 cut(s) 1344, 1561, 1927
FbaI TGATCA 1 cut(s) 286
FblI GTMKAC 2 cut(s) 649, 1455
Fnu4HI GCNGC 8 cut(s) 343, 903, 1271, 1544, 1761, 2071, 2090, 2189
FokI GGATG 9 cut(s) 566, 596, 1045, 1913, 2023, 2171, 2197, 2242, 2252
Fsp4HI GCNGC 8 cut(s) 343, 903, 1271, 1544, 1761, 2071, 2090, 2189
FspBI CTAG 3 cut(s) 840, 879, 989
GlaI GCGC 1 cut(s) 1169
GluI GCNGC 8 cut(s) 343, 903, 1271, 1544, 1761, 2071, 2090, 2189
GsuI CTGGAG 4 cut(s) 275, 1144, 1428, 2372
HaeII RGCGCY 1 cut(s) 1171
HaeIII GGCC 2 cut(s) 349, 1341
HapII CCGG 2 cut(s) 346, 2102
HhaI GCGC 1 cut(s) 1170
Hin1II CATG 8 cut(s) 583, 1024, 1265, 1576, 1593, 2009, 2139, 2436
Hin6I GCGC 1 cut(s) 1168
HinP1I GCGC 1 cut(s) 1168
HincII GTYRAC 1 cut(s) 732
HindII GTYRAC 1 cut(s) 732
HindIII AAGCTT 2 cut(s) 317, 1890
HinfI GANTC 6 cut(s) 157, 443, 978, 1068, 2168, 2398
HpaII CCGG 2 cut(s) 346, 2102
HphI GGTGA 4 cut(s) 1591, 2107, 2273, 2612
Hpy166II GTNNAC 7 cut(s) 650, 732, 1058, 1456, 1612, 1726, 2287
Hpy188I TCNGA 8 cut(s) 412, 448, 1067, 1101, 1118, 1190, 2229, 2472
Hpy8I GTNNAC 7 cut(s) 650, 732, 1058, 1456, 1612, 1726, 2287
HpyAV CCTTC 6 cut(s) 208, 212, 292, 747, 1493, 1797
HpyCH4III ACNGT 6 cut(s) 188, 196, 405, 1723, 2518, 2632
HpyCH4IV ACGT 1 cut(s) 2561
HpyF10VI GCNNNNNNNGC 4 cut(s) 701, 812, 1159, 2249
HpyF3I CTNAG 8 cut(s) 133, 320, 411, 676, 807, 1026, 1088, 1187
HpySE526I ACGT 1 cut(s) 2561
Hsp92II CATG 8 cut(s) 583, 1024, 1265, 1576, 1593, 2009, 2139, 2436
HspAI GCGC 1 cut(s) 1168
KpnI GGTACC 1 cut(s) 796
KroI GCCGGC 1 cut(s) 345
KroNI GCCGGC 1 cut(s) 347
Ksp22I TGATCA 1 cut(s) 286
Kzo9I GATC 6 cut(s) 233, 286, 460, 1075, 1426, 2407
LguI GCTCTTC 1 cut(s) 417
LmnI GCTCC 3 cut(s) 1409, 1502, 1519
Lsp1109I GCAGC 8 cut(s) 354, 889, 1257, 1555, 1772, 2076, 2082, 2175
LweI GCATC 7 cut(s) 807, 1038, 1620, 1891, 2148, 2175, 2230
MaeI CTAG 3 cut(s) 840, 879, 989
MaeII ACGT 1 cut(s) 2561
MaeIII GTNAC 7 cut(s) 326, 575, 1134, 1867, 1969, 2095, 2600
MalI GATC 6 cut(s) 235, 288, 462, 1077, 1428, 2409
MboI GATC 6 cut(s) 233, 286, 460, 1075, 1426, 2407
MfeI CAATTG 1 cut(s) 455
MflI RGATCY 1 cut(s) 1426
MhlI GDGCHC 3 cut(s) 1060, 1414, 2289
MlyI GAGTC 3 cut(s) 166, 452, 2177
MmeI TCCRAC 2 cut(s) 1416, 2028
Mph1103I ATGCAT 1 cut(s) 2141
MroNI GCCGGC 1 cut(s) 345
MroXI GAANNNNTTC 4 cut(s) 391, 1397, 2444, 2466
MslI CAYNNNNRTG 2 cut(s) 1019, 1577
MspA1I CMGCKG 2 cut(s) 1486, 2032
MspI CCGG 2 cut(s) 346, 2102
MspR9I CCNGG 1 cut(s) 2281
MunI CAATTG 1 cut(s) 455
Mva1269I GAATGC 2 cut(s) 2417, 2508
MvaI CCWGG 1 cut(s) 2281
MwoI GCNNNNNNNGC 4 cut(s) 701, 812, 1159, 2249
NaeI GCCGGC 1 cut(s) 347
NcoI CCATGG 1 cut(s) 2005
NdeI CATATG 3 cut(s) 1344, 1561, 1927
NdeII GATC 6 cut(s) 233, 286, 460, 1075, 1426, 2407
NgoMIV GCCGGC 1 cut(s) 345
NheI GCTAGC 1 cut(s) 988
NlaIII CATG 8 cut(s) 583, 1024, 1265, 1576, 1593, 2009, 2139, 2436
NlaIV GGNNCC 4 cut(s) 511, 794, 1428, 1440
NmuCI GTSAC 6 cut(s) 326, 575, 1867, 1969, 2095, 2600
NsiI ATGCAT 1 cut(s) 2141
NspI RCATGY 3 cut(s) 1024, 1593, 2139
PaeI GCATGC 1 cut(s) 2139
PciSI GCTCTTC 1 cut(s) 417
PctI GAATGC 2 cut(s) 2417, 2508
PdiI GCCGGC 1 cut(s) 347
PdmI GAANNNNTTC 4 cut(s) 391, 1397, 2444, 2466
PfeI GAWTC 3 cut(s) 978, 1068, 2398
PkrI GCNGC 8 cut(s) 344, 904, 1272, 1545, 1762, 2072, 2091, 2190
PleI GAGTC 3 cut(s) 165, 451, 2176
PpsI GAGTC 3 cut(s) 165, 451, 2176
PshAI GACNNNNGTC 1 cut(s) 406
Psp6I CCWGG 1 cut(s) 2279
PspGI CCWGG 1 cut(s) 2279
PspN4I GGNNCC 4 cut(s) 511, 794, 1428, 1440
PspPI GGNCC 2 cut(s) 1339, 2002
PsrI GAACNNNNNNTAC 4 cut(s) 1707, 1739, 2616, 2648
PstI CTGCAG 3 cut(s) 1762, 2415, 2490
PsuI RGATCY 1 cut(s) 1426
PvuII CAGCTG 1 cut(s) 2032
RsaI GTAC 7 cut(s) 794, 1218, 1467, 1601, 1716, 2060, 2629
RsaNI GTAC 7 cut(s) 793, 1217, 1466, 1600, 1715, 2059, 2628
RseI CAYNNNNRTG 2 cut(s) 1019, 1577
SapI GCTCTTC 1 cut(s) 417
SatI GCNGC 8 cut(s) 343, 903, 1271, 1544, 1761, 2071, 2090, 2189
Sau3AI GATC 6 cut(s) 233, 286, 460, 1075, 1426, 2407
Sau96I GGNCC 2 cut(s) 1339, 2002
ScaI AGTACT 1 cut(s) 1467
SchI GAGTC 3 cut(s) 166, 452, 2177
ScrFI CCNGG 1 cut(s) 2281
SduI GDGCHC 3 cut(s) 1060, 1414, 2289
SfaNI GCATC 7 cut(s) 807, 1038, 1620, 1891, 2148, 2175, 2230
SfcI CTRYAG 3 cut(s) 1758, 2411, 2486
SinI GGWCC 1 cut(s) 2002
SmiMI CAYNNNNRTG 2 cut(s) 1019, 1577
SphI GCATGC 1 cut(s) 2139
SsiI CCGC 5 cut(s) 796, 1337, 1378, 1486, 2092
SspI AATATT 1 cut(s) 2212
SspMI CTAG 3 cut(s) 840, 879, 989
StyD4I CCNGG 1 cut(s) 2279
StyI CCWWGG 2 cut(s) 878, 2005
TaaI ACNGT 6 cut(s) 188, 196, 405, 1723, 2518, 2632
TaiI ACGT 1 cut(s) 2564
TaqI TCGA 4 cut(s) 463, 635, 1212, 1783
TaqII GACCGA 2 cut(s) 2309, 2319
TatI WGTACW 5 cut(s) 1216, 1465, 1599, 1714, 2627
TfiI GAWTC 3 cut(s) 978, 1068, 2398
TscAI CASTG 4 cut(s) 808, 823, 934, 1882
TseFI GTSAC 6 cut(s) 326, 575, 1867, 1969, 2095, 2600
TseI GCWGC 8 cut(s) 342, 902, 1270, 1543, 1760, 2070, 2089, 2188
Tsp45I GTSAC 6 cut(s) 326, 575, 1867, 1969, 2095, 2600
TspGWI ACGGA 2 cut(s) 530, 879
TspRI CASTG 4 cut(s) 808, 823, 934, 1882
VneI GTGCAC 2 cut(s) 1056, 2285
VpaK11BI GGWCC 1 cut(s) 2002
XapI RAATTY 8 cut(s) 249, 269, 850, 913, 923, 1112, 2307, 2440
XceI RCATGY 3 cut(s) 1024, 1593, 2139
XmaJI CCTAGG 1 cut(s) 878
XmiI GTMKAC 2 cut(s) 649, 1455
XmnI GAANNNNTTC 4 cut(s) 391, 1397, 2444, 2466
XspI CTAG 3 cut(s) 840, 879, 989
ZrmI AGTACT 1 cut(s) 1467
Zsp2I ATGCAT 1 cut(s) 2141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.