Prupe.4G208100_v2.0.a1

f-box protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
12962707 .. 12964438
1732 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G208100.1

Sequence Viewer

Length: 1386 bp
ATGGACCGCTTCTTAGTGTTGCCCGAGTCCCACCTCGTCGCCATTGTCTCCTTCTTGCCTTTCAAAGAAGCGGCAAGAACCTCCGTTCTGTCGAAGCGTTGGCGTCACGTTTGGCGTTTGTCGAAAAACATCGAGTTCGACGAACGTTGCTTTGCCAACGTCGATGCCGATAGAGAGGTCCAAATACAAGTGTTCATTGATTTTGTGCGGCAGTGGGTTCAAAACTACCAAGAACCCACCGTGGACAGACTTTCTCTCAAGTTTTCGCAGCCACAAAATAACCCAAGGGTTGTCGAAAACTGCATCGCATTTGCCCTCGCCGGCCATGTCAAACACCTAGCGCTTGATTTCTCTGATCGCACATGGGCTGTACACGATCTCGACGATATTGCTCATCCGACGCAGTTTGATCTGCCTCTGTCTGTTTATAACCATCCTCTCGAATCTTTGACTCTGTCTTCTTGCAACTTCAATGTGTCCGAGTTCAAGAATTTTGGGATGCTTAAAGAAATTTCGTTGTGTTGGGTTGAAATGAAGGAAAGCACTACCAAGGCTTTGTTGGCCAACTGTGGGTGTCTTGAGAGTTTGAGCCTGAGACACTGTTGGGACATGGACAACTTCTTCTGTGTTCGAGTAGGGGAATTAAAGCTGAAAACTTTGGTGGTTTATAAGTGCAGGTTTATGTGTTCTTACTTTGAATTTGAGGCACCAAATCTGCGTTGTCTGAGGTACTCTGGGACCCTGCCAAAATTTTGTTTACTCAGAAATGGAGGCTTGGATGAGGTGGATCTTGACTTTGGGCATGAGACTCATGGGAATGAGGCAGTGTCTGATCTTCTTGGTCAACTCATCGATGAAGTCAACCCCATGAGGGCATTGACTGTTTGCACCTTCATGCTTCAGGTTCTTCCAATGGGAGAGGAAGGCATTGGTTCTCCTTTGGGCATTACACAGTTGACACTAAAAACGACGATGCATGACCATGAACAACACGGCATCCAGTATTTCTTGAAAAACTGTCCCCAACTGGAGACTCTGAAATTCGAAATAGACAGCCATGCCCGTACCAGAATTATCAATTATACGGAATATGAAGCTCCATGTGCTGAAGTGAAACCTGAACATATGTGGGACGAGAACACGATTACTTTCTCGTGTGTAACGCAGACTCTGAGAGAGGTTGAGATGAAGGGCTTTAGGGCGTCGCCAAACGAGATCGGTTTCATGTGCTATCTGCTCTACCATGGCCGCCTCATGGAAAAGCTTACTATTATTGTTTCAAGCCAAGCGAGCGGTCGTGGAAACCCACAACTCTACCGAATGGTAGCTGAAAAGACGCGGGATTTACCTAGAACGGTACCAAATCTGCAGATTATAATTATTTAA

Protein Analysis

462

Amino Acids

53.14

Weight (kDa)

5.84

Isoelectric Point (pI)

27.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 429, 669, 1376
Acc36I ACCTGC 1 cut(s) 666
Acc65I GGTACC 1 cut(s) 1357
AccB1I GGYRCC 2 cut(s) 706, 1357
AccBSI CCGCTC 1 cut(s) 1293
AccII CGCG 1 cut(s) 1339
AciI CCGC 6 cut(s) 7, 71, 208, 1249, 1293, 1339
AclI AACGTT 1 cut(s) 145
AclWI GGATC 1 cut(s) 795
AcoI YGGCCR 3 cut(s) 322, 561, 1246
AcsI RAATTY 5 cut(s) 490, 510, 698, 749, 1040
AcuI CTGAAG 2 cut(s) 884, 1128
AcyI GRCGYC 2 cut(s) 103, 1202
AfaI GTAC 4 cut(s) 372, 731, 1066, 1359
AfeI AGCGCT 1 cut(s) 342
AfiI CCNNNNNNNGG 3 cut(s) 570, 871, 1255
AgsI TTSAA 8 cut(s) 64, 221, 472, 487, 530, 698, 1012, 1281
AluBI AGCT 4 cut(s) 649, 1097, 1264, 1328
AluI AGCT 4 cut(s) 649, 1097, 1264, 1328
Alw26I GTCTC 4 cut(s) 52, 589, 800, 1025
AlwI GGATC 1 cut(s) 795
AlwNI CAGNNNCTG 2 cut(s) 830, 1171
Ama87I CYCGRG 1 cut(s) 23
Aor51HI AGCGCT 1 cut(s) 342
AoxI GGCC 3 cut(s) 322, 561, 1246
ApeKI GCWGC 1 cut(s) 268
ApoI RAATTY 5 cut(s) 490, 510, 698, 749, 1040
Asp718I GGTACC 1 cut(s) 1357
AspLEI GCGC 1 cut(s) 343
AspS9I GGNCC 3 cut(s) 4, 178, 738
AsuII TTCGAA 1 cut(s) 1044
AvaI CYCGRG 1 cut(s) 23
AvaII GGWCC 3 cut(s) 4, 178, 738
BalI TGGCCA 1 cut(s) 563
BanI GGYRCC 2 cut(s) 706, 1357
BauI CACGAG 1 cut(s) 1153
BbsI GAAGAC 1 cut(s) 450
BbvI GCAGC 1 cut(s) 280
BccI CCATC 1 cut(s) 441
BceAI ACGGC 1 cut(s) 1009
BcgI CGANNNNNNTGC 2 cut(s) 371, 405
BcoDI GTCTC 4 cut(s) 52, 589, 800, 1025
BfaI CTAG 2 cut(s) 338, 1350
BfmI CTRYAG 1 cut(s) 1367
BfoI RGCGCY 1 cut(s) 344
BfuAI ACCTGC 1 cut(s) 666
BisI GCNGC 4 cut(s) 72, 209, 269, 1249
BlsI GCNGC 4 cut(s) 73, 210, 270, 1250
Bme18I GGWCC 3 cut(s) 4, 178, 738
BmeT110I CYCGRG 1 cut(s) 23
BmgT120I GGNCC 3 cut(s) 4, 178, 738
BmiI GGNNCC 4 cut(s) 708, 739, 740, 1359
BmsI GCATC 5 cut(s) 154, 312, 489, 963, 1005
BpiI GAAGAC 1 cut(s) 450
BpmI CTGGAG 1 cut(s) 1049
Bpu14I TTCGAA 1 cut(s) 1044
BpuEI CTTGAG 2 cut(s) 242, 599
Bsa29I ATCGAT 1 cut(s) 852
BsaHI GRCGYC 2 cut(s) 103, 1202
BsaJI CCNNGG 4 cut(s) 240, 284, 549, 1243
Bsc4I CCNNNNNNNGG 3 cut(s) 570, 871, 1255
Bse118I RCCGGY 1 cut(s) 320
Bse1I ACTGG 2 cut(s) 1000, 1032
BseCI ATCGAT 1 cut(s) 852
BseDI CCNNGG 4 cut(s) 240, 284, 549, 1243
BseGI GGATG 5 cut(s) 394, 433, 504, 784, 996
BseLI CCNNNNNNNGG 3 cut(s) 570, 871, 1255
BseMII CTCAG 4 cut(s) 584, 716, 775, 1163
BseNI ACTGG 2 cut(s) 1000, 1032
BseXI GCAGC 1 cut(s) 280
BsgI GTGCAG 1 cut(s) 694
Bsh1236I CGCG 1 cut(s) 1339
Bsh1285I CGRYCG 1 cut(s) 1297
BshFI GGCC 3 cut(s) 324, 563, 1248
BshNI GGYRCC 2 cut(s) 706, 1357
BshVI ATCGAT 1 cut(s) 852
BsiEI CGRYCG 1 cut(s) 1297
BsiHKCI CYCGRG 1 cut(s) 23
BsiSI CCGG 1 cut(s) 321
BslFI GGGAC 5 cut(s) 13, 620, 751, 1005, 1145
BslI CCNNNNNNNGG 3 cut(s) 570, 871, 1255
BsmAI GTCTC 4 cut(s) 52, 589, 800, 1025
BsmFI GGGAC 5 cut(s) 13, 620, 751, 1005, 1145
BsnI GGCC 3 cut(s) 324, 563, 1248
BsoBI CYCGRG 1 cut(s) 23
Bsp119I TTCGAA 1 cut(s) 1044
Bsp1407I TGTACA 1 cut(s) 370
Bsp143I GATC 6 cut(s) 355, 376, 409, 787, 832, 1215
Bsp19I CCATGG 1 cut(s) 1243
BspACI CCGC 6 cut(s) 7, 71, 208, 1249, 1293, 1339
BspANI GGCC 3 cut(s) 324, 563, 1248
BspCNI CTCAG 4 cut(s) 585, 717, 774, 1164
BspDI ATCGAT 1 cut(s) 852
BspFNI CGCG 1 cut(s) 1339
BspLI GGNNCC 4 cut(s) 708, 739, 740, 1359
BspMAI CTGCAG 1 cut(s) 1371
BspMI ACCTGC 1 cut(s) 666
BspPI GGATC 1 cut(s) 795
BspT104I TTCGAA 1 cut(s) 1044
BspT107I GGYRCC 2 cut(s) 706, 1357
BsrBI CCGCTC 1 cut(s) 1293
BsrFI RCCGGY 1 cut(s) 320
BsrGI TGTACA 1 cut(s) 370
BsrI ACTGG 2 cut(s) 1000, 1032
BssAI RCCGGY 1 cut(s) 320
BssECI CCNNGG 4 cut(s) 240, 284, 549, 1243
BssMI GATC 6 cut(s) 355, 376, 409, 787, 832, 1215
BssNI GRCGYC 2 cut(s) 103, 1202
BssSI CACGAG 1 cut(s) 1153
BssT1I CCWWGG 3 cut(s) 284, 549, 1243
Bst2BI CACGAG 1 cut(s) 1153
Bst4CI ACNGT 7 cut(s) 241, 569, 602, 883, 954, 1019, 1357
BstACI GRCGYC 2 cut(s) 103, 1202
BstAUI TGTACA 1 cut(s) 370
BstBI TTCGAA 1 cut(s) 1044
BstC8I GCNNGC 2 cut(s) 322, 1291
BstDEI CTNAG 5 cut(s) 13, 593, 725, 761, 1172
BstDSI CCRYGG 2 cut(s) 240, 1243
BstF5I GGATG 5 cut(s) 394, 433, 504, 784, 996
BstFNI CGCG 1 cut(s) 1339
BstH2I RGCGCY 1 cut(s) 344
BstHHI GCGC 1 cut(s) 343
BstKTI GATC 6 cut(s) 358, 379, 412, 790, 835, 1218
BstMAI GTCTC 4 cut(s) 52, 589, 800, 1025
BstMBI GATC 6 cut(s) 355, 376, 409, 787, 832, 1215
BstMCI CGRYCG 1 cut(s) 1297
BstMWI GCNNNNNNNGC 3 cut(s) 560, 1103, 1290
BstSFI CTRYAG 1 cut(s) 1367
BstUI CGCG 1 cut(s) 1339
BstV1I GCAGC 1 cut(s) 280
BstV2I GAAGAC 1 cut(s) 450
BstX2I RGATCY 1 cut(s) 787
BstYI RGATCY 1 cut(s) 787
Bsu15I ATCGAT 1 cut(s) 852
BsuRI GGCC 3 cut(s) 324, 563, 1248
BsuTUI ATCGAT 1 cut(s) 852
BtgI CCRYGG 2 cut(s) 240, 1243
BtgZI GCGATG 1 cut(s) 289
BtsCI GGATG 5 cut(s) 394, 433, 504, 784, 996
BtsI GCAGTG 2 cut(s) 218, 831
BtsIMutI CAGTG 3 cut(s) 218, 598, 831
BveI ACCTGC 1 cut(s) 666
Cac8I GCNNGC 2 cut(s) 322, 1291
CaiI CAGNNNCTG 2 cut(s) 830, 1171
CfoI GCGC 1 cut(s) 343
Cfr10I RCCGGY 1 cut(s) 320
Cfr13I GGNCC 3 cut(s) 4, 178, 738
ClaI ATCGAT 1 cut(s) 852
CseI GACGC 4 cut(s) 92, 409, 1191, 1345
Csp6I GTAC 4 cut(s) 371, 730, 1065, 1358
CviQI GTAC 4 cut(s) 371, 730, 1065, 1358
DdeI CTNAG 5 cut(s) 13, 593, 725, 761, 1172
DpnI GATC 6 cut(s) 357, 378, 411, 789, 834, 1217
DpnII GATC 6 cut(s) 355, 376, 409, 787, 832, 1215
EaeI YGGCCR 3 cut(s) 322, 561, 1246
Eco130I CCWWGG 3 cut(s) 284, 549, 1243
Eco47I GGWCC 3 cut(s) 4, 178, 738
Eco47III AGCGCT 1 cut(s) 342
Eco57I CTGAAG 2 cut(s) 884, 1128
Eco88I CYCGRG 1 cut(s) 23
EcoO109I RGGNCCY 1 cut(s) 738
EcoT14I CCWWGG 3 cut(s) 284, 549, 1243
EcoT22I ATGCAT 1 cut(s) 978
ErhI CCWWGG 3 cut(s) 284, 549, 1243
FaqI GGGAC 5 cut(s) 13, 620, 751, 1005, 1145
FauI CCCGC 1 cut(s) 1332
FauNDI CATATG 1 cut(s) 1125
Fnu4HI GCNGC 4 cut(s) 72, 209, 269, 1249
FokI GGATG 5 cut(s) 381, 420, 511, 791, 983
Fsp4HI GCNGC 4 cut(s) 72, 209, 269, 1249
FspBI CTAG 2 cut(s) 338, 1350
GlaI GCGC 1 cut(s) 342
GluI GCNGC 4 cut(s) 72, 209, 269, 1249
GsuI CTGGAG 1 cut(s) 1049
HaeII RGCGCY 1 cut(s) 344
HaeIII GGCC 3 cut(s) 324, 563, 1248
HapII CCGG 1 cut(s) 321
HgaI GACGC 4 cut(s) 92, 409, 1191, 1345
HhaI GCGC 1 cut(s) 343
Hin1I GRCGYC 2 cut(s) 103, 1202
Hin6I GCGC 1 cut(s) 341
HinP1I GCGC 1 cut(s) 341
HincII GTYRAC 3 cut(s) 845, 862, 957
HindII GTYRAC 3 cut(s) 845, 862, 957
HindIII AAGCTT 1 cut(s) 1262
HinfI GANTC 6 cut(s) 26, 443, 451, 808, 1033, 1168
HpaII CCGG 1 cut(s) 321
Hpy166II GTNNAC 6 cut(s) 244, 373, 758, 845, 862, 957
Hpy188I TCNGA 8 cut(s) 355, 399, 481, 726, 764, 832, 1038, 1173
Hpy188III TCNNGA 6 cut(s) 380, 440, 487, 578, 791, 1009
Hpy8I GTNNAC 6 cut(s) 244, 373, 758, 845, 862, 957
Hpy99I CGWCG 7 cut(s) 41, 143, 164, 386, 403, 973, 1207
HpyAV CCTTC 5 cut(s) 61, 529, 901, 917, 1183
HpyCH4III ACNGT 7 cut(s) 241, 569, 602, 883, 954, 1019, 1357
HpyCH4IV ACGT 3 cut(s) 108, 145, 159
HpyCH4V TGCA 6 cut(s) 303, 465, 675, 888, 976, 1369
HpyF10VI GCNNNNNNNGC 3 cut(s) 560, 1103, 1290
HpyF3I CTNAG 5 cut(s) 13, 593, 725, 761, 1172
HpySE526I ACGT 3 cut(s) 108, 145, 159
Hsp92I GRCGYC 2 cut(s) 103, 1202
HspAI GCGC 1 cut(s) 341
KflI GGGWCCC 1 cut(s) 738
KpnI GGTACC 1 cut(s) 1361
KroI GCCGGC 1 cut(s) 320
KroNI GCCGGC 1 cut(s) 322
Kzo9I GATC 6 cut(s) 355, 376, 409, 787, 832, 1215
LmnI GCTCC 1 cut(s) 1102
Lsp1109I GCAGC 1 cut(s) 280
LweI GCATC 5 cut(s) 154, 312, 489, 963, 1005
MaeI CTAG 2 cut(s) 338, 1350
MaeII ACGT 3 cut(s) 108, 145, 159
MaeIII GTNAC 2 cut(s) 104, 1159
MalI GATC 6 cut(s) 357, 378, 411, 789, 834, 1217
MbiI CCGCTC 1 cut(s) 1293
MboI GATC 6 cut(s) 355, 376, 409, 787, 832, 1215
MboII GAAGA 4 cut(s) 450, 613, 827, 899
MflI RGATCY 1 cut(s) 787
MlsI TGGCCA 1 cut(s) 563
MluCI AATT 9 cut(s) 490, 510, 641, 698, 749, 1040, 1071, 1078, 1377
MluNI TGGCCA 1 cut(s) 563
MlyI GAGTC 5 cut(s) 35, 445, 802, 1027, 1162
MmeI TCCRAC 1 cut(s) 422
Mox20I TGGCCA 1 cut(s) 563
Mph1103I ATGCAT 1 cut(s) 978
MroNI GCCGGC 1 cut(s) 320
MscI TGGCCA 1 cut(s) 563
MseI TTAA 3 cut(s) 504, 644, 1384
MslI CAYNNNNRTG 3 cut(s) 816, 893, 981
Msp20I TGGCCA 1 cut(s) 563
MspI CCGG 1 cut(s) 321
MvnI CGCG 1 cut(s) 1339
MwoI GCNNNNNNNGC 3 cut(s) 560, 1103, 1290
NaeI GCCGGC 1 cut(s) 322
NcoI CCATGG 1 cut(s) 1243
NdeI CATATG 1 cut(s) 1125
NdeII GATC 6 cut(s) 355, 376, 409, 787, 832, 1215
NgoMIV GCCGGC 1 cut(s) 320
NlaIV GGNNCC 4 cut(s) 708, 739, 740, 1359
NmuCI GTSAC 1 cut(s) 104
NsiI ATGCAT 1 cut(s) 978
NspV TTCGAA 1 cut(s) 1044
PcsI WCGNNNNNNNCGW 3 cut(s) 138, 165, 381
PdiI GCCGGC 1 cut(s) 322
PfeI GAWTC 1 cut(s) 443
PflFI GACNNNGTC 1 cut(s) 454
PkrI GCNGC 4 cut(s) 73, 210, 270, 1250
PleI GAGTC 5 cut(s) 34, 445, 802, 1027, 1162
PpsI GAGTC 5 cut(s) 34, 445, 802, 1027, 1162
PpuMI RGGWCCY 1 cut(s) 738
PsiI TTATAA 3 cut(s) 429, 669, 1376
Psp1406I AACGTT 1 cut(s) 145
Psp5II RGGWCCY 1 cut(s) 738
PspN4I GGNNCC 4 cut(s) 708, 739, 740, 1359
PspPI GGNCC 3 cut(s) 4, 178, 738
PspPPI RGGWCCY 1 cut(s) 738
PstI CTGCAG 1 cut(s) 1371
PstNI CAGNNNCTG 2 cut(s) 830, 1171
PsuI RGATCY 1 cut(s) 787
PsyI GACNNNGTC 1 cut(s) 454
RsaI GTAC 4 cut(s) 372, 731, 1066, 1359
RsaNI GTAC 4 cut(s) 371, 730, 1065, 1358
RseI CAYNNNNRTG 3 cut(s) 816, 893, 981
SaqAI TTAA 3 cut(s) 504, 644, 1384
SatI GCNGC 4 cut(s) 72, 209, 269, 1249
Sau3AI GATC 6 cut(s) 355, 376, 409, 787, 832, 1215
Sau96I GGNCC 3 cut(s) 4, 178, 738
SchI GAGTC 5 cut(s) 35, 445, 802, 1027, 1162
SfaNI GCATC 5 cut(s) 154, 312, 489, 963, 1005
SfcI CTRYAG 1 cut(s) 1367
SfuI TTCGAA 1 cut(s) 1044
SinI GGWCC 3 cut(s) 4, 178, 738
SmiMI CAYNNNNRTG 3 cut(s) 816, 893, 981
SmlI CTYRAG 2 cut(s) 257, 578
SmoI CTYRAG 2 cut(s) 257, 578
Sse9I AATT 9 cut(s) 490, 510, 641, 698, 749, 1040, 1071, 1078, 1377
SsiI CCGC 6 cut(s) 7, 71, 208, 1249, 1293, 1339
SspMI CTAG 2 cut(s) 338, 1350
StyI CCWWGG 3 cut(s) 284, 549, 1243
TaaI ACNGT 7 cut(s) 241, 569, 602, 883, 954, 1019, 1357
TaiI ACGT 3 cut(s) 111, 148, 162
TasI AATT 9 cut(s) 490, 510, 641, 698, 749, 1040, 1071, 1078, 1377
TatI WGTACW 1 cut(s) 370
TauI GCSGC 3 cut(s) 74, 211, 1251
TfiI GAWTC 1 cut(s) 443
Tru1I TTAA 3 cut(s) 504, 644, 1384
Tru9I TTAA 3 cut(s) 504, 644, 1384
TscAI CASTG 3 cut(s) 218, 605, 831
TseFI GTSAC 1 cut(s) 104
TseI GCWGC 1 cut(s) 268
Tsp45I GTSAC 1 cut(s) 104
TspDTI ATGAA 8 cut(s) 184, 548, 870, 883, 999, 1107, 1202, 1213
TspGWI ACGGA 2 cut(s) 73, 1100
TspRI CASTG 3 cut(s) 218, 605, 831
Tth111I GACNNNGTC 1 cut(s) 454
VpaK11BI GGWCC 3 cut(s) 4, 178, 738
XapI RAATTY 5 cut(s) 490, 510, 698, 749, 1040
XcmI CCANNNNNNNNNTGG 1 cut(s) 556
XspI CTAG 2 cut(s) 338, 1350
Zsp2I ATGCAT 1 cut(s) 978
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.