f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G56400 AT1G56400 AT2G17305 AT3G29830 AT3G29830 AT3G62230 AT5G54820 |
| fragaria_vesca | FvH4_7g19741 |
| malus_domestica | MD03G1208600.v1.1 MD11G1222600.v1.1 MD11G1222800.v1.1 MD11G1223200.v1.1 |
| prunus_persica | Prupe.4G208100_v2.0.a1 Prupe.4G208200_v2.0.a1 Prupe.4G208300_v2.0.a1 |
| pyrus_communis | pycom03g15720 pycom03g15760 pycom11g19660 |
| rosa_chinensis | RchiOBHm_Chr1g0363631 RchiOBHm_Chr7g0214121 |
| rosa_laevigata | RLG00000008357 RLG00000027555 |
| rosa_multiflora | Rmu_sc0000548.1_g000010 Rmu_sc0000675.1_g000034 |
| rosa_roxburghii | Rroxscaffold_4G00293030 |
| rosa_rugosa | Rorug01G0308300 |
| rosa_samantha | Rh1AG089100 Rh1AG317200 Rh1BG280600 Rh1CG296700 Rh1DG311800 Rh4AG168100 Rh4BG165000 |
| rosa_wichuraiana | Rw1G006910 Rw1G028130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 500 |
| AcoI | YGGCCR | 1 cut(s) | 150 |
| AcsI | RAATTY | 1 cut(s) | 382 |
| AcuI | CTGAAG | 2 cut(s) | 498, 541 |
| AfaI | GTAC | 1 cut(s) | 392 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 35 |
| AgsI | TTSAA | 7 cut(s) | 116, 145, 175, 200, 293, 368, 388 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 539, 571 |
| AluBI | AGCT | 1 cut(s) | 324 |
| AluI | AGCT | 1 cut(s) | 324 |
| AlwI | GGATC | 1 cut(s) | 500 |
| Ama87I | CYCGRG | 1 cut(s) | 470 |
| AoxI | GGCC | 2 cut(s) | 150, 286 |
| ApoI | RAATTY | 1 cut(s) | 382 |
| AsuHPI | GGTGA | 1 cut(s) | 50 |
| AvaI | CYCGRG | 1 cut(s) | 470 |
| BbsI | GAAGAC | 1 cut(s) | 486 |
| BccI | CCATC | 2 cut(s) | 37, 576 |
| BfaI | CTAG | 1 cut(s) | 8 |
| BmcAI | AGTACT | 1 cut(s) | 392 |
| BmeT110I | CYCGRG | 1 cut(s) | 470 |
| BmsI | GCATC | 2 cut(s) | 386, 521 |
| BoxI | GACNNNNGTC | 2 cut(s) | 237, 472 |
| BpiI | GAAGAC | 1 cut(s) | 486 |
| BpuEI | CTTGAG | 2 cut(s) | 72, 479 |
| BsaBI | GATNNNNATC | 1 cut(s) | 368 |
| BsaJI | CCNNGG | 1 cut(s) | 359 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 35 |
| Bse1I | ACTGG | 2 cut(s) | 289, 581 |
| Bse8I | GATNNNNATC | 1 cut(s) | 368 |
| BseDI | CCNNGG | 1 cut(s) | 359 |
| BseGI | GGATG | 2 cut(s) | 426, 536 |
| BseJI | GATNNNNATC | 1 cut(s) | 368 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 35 |
| BseMII | CTCAG | 1 cut(s) | 248 |
| BseNI | ACTGG | 2 cut(s) | 289, 581 |
| BseRI | GAGGAG | 1 cut(s) | 499 |
| BshFI | GGCC | 2 cut(s) | 152, 288 |
| BsiHKCI | CYCGRG | 1 cut(s) | 470 |
| BslFI | GGGAC | 1 cut(s) | 421 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 35 |
| BsmFI | GGGAC | 1 cut(s) | 421 |
| BsnI | GGCC | 2 cut(s) | 152, 288 |
| BsoBI | CYCGRG | 1 cut(s) | 470 |
| Bsp143I | GATC | 1 cut(s) | 492 |
| BspANI | GGCC | 2 cut(s) | 152, 288 |
| BspCNI | CTCAG | 1 cut(s) | 249 |
| BspPI | GGATC | 1 cut(s) | 500 |
| BsrI | ACTGG | 2 cut(s) | 289, 581 |
| BssECI | CCNNGG | 1 cut(s) | 359 |
| BssMI | GATC | 1 cut(s) | 492 |
| BssT1I | CCWWGG | 1 cut(s) | 359 |
| Bst6I | CTCTTC | 1 cut(s) | 441 |
| BstDEI | CTNAG | 3 cut(s) | 257, 317, 325 |
| BstF5I | GGATG | 2 cut(s) | 426, 536 |
| BstKTI | GATC | 1 cut(s) | 495 |
| BstMBI | GATC | 1 cut(s) | 492 |
| BstNSI | RCATGY | 1 cut(s) | 555 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 237, 472 |
| BstV2I | GAAGAC | 1 cut(s) | 486 |
| BsuRI | GGCC | 2 cut(s) | 152, 288 |
| BtsCI | GGATG | 2 cut(s) | 426, 536 |
| BtsIMutI | CAGTG | 1 cut(s) | 282 |
| Csp6I | GTAC | 1 cut(s) | 391 |
| CviAII | CATG | 4 cut(s) | 33, 104, 346, 552 |
| CviJI | RGCY | 8 cut(s) | 5, 13, 152, 255, 288, 316, 324, 416 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 13, 152, 255, 288, 316, 324, 416 |
| CviQI | GTAC | 1 cut(s) | 391 |
| DdeI | CTNAG | 3 cut(s) | 257, 317, 325 |
| DpnI | GATC | 1 cut(s) | 494 |
| DpnII | GATC | 1 cut(s) | 492 |
| EaeI | YGGCCR | 1 cut(s) | 150 |
| Eam1104I | CTCTTC | 1 cut(s) | 441 |
| EarI | CTCTTC | 1 cut(s) | 441 |
| Eco130I | CCWWGG | 1 cut(s) | 359 |
| Eco57I | CTGAAG | 2 cut(s) | 498, 541 |
| Eco88I | CYCGRG | 1 cut(s) | 470 |
| EcoT14I | CCWWGG | 1 cut(s) | 359 |
| ErhI | CCWWGG | 1 cut(s) | 359 |
| FaeI | CATG | 4 cut(s) | 36, 107, 349, 555 |
| FaiI | YATR | 6 cut(s) | 34, 105, 347, 413, 454, 553 |
| FaqI | GGGAC | 1 cut(s) | 421 |
| FatI | CATG | 4 cut(s) | 32, 103, 345, 551 |
| FokI | GGATG | 2 cut(s) | 413, 543 |
| FspBI | CTAG | 1 cut(s) | 8 |
| HaeIII | GGCC | 2 cut(s) | 152, 288 |
| Hin1II | CATG | 4 cut(s) | 36, 107, 349, 555 |
| HindIII | AAGCTT | 1 cut(s) | 322 |
| HinfI | GANTC | 6 cut(s) | 116, 259, 355, 468, 473, 580 |
| HphI | GGTGA | 1 cut(s) | 50 |
| Hpy188I | TCNGA | 4 cut(s) | 352, 431, 478, 573 |
| Hpy188III | TCNNGA | 2 cut(s) | 113, 172 |
| HpyAV | CCTTC | 4 cut(s) | 81, 222, 299, 482 |
| HpyCH4IV | ACGT | 1 cut(s) | 224 |
| HpyCH4V | TGCA | 1 cut(s) | 138 |
| HpyF3I | CTNAG | 3 cut(s) | 257, 317, 325 |
| HpySE526I | ACGT | 1 cut(s) | 224 |
| Hsp92II | CATG | 4 cut(s) | 36, 107, 349, 555 |
| Kzo9I | GATC | 1 cut(s) | 492 |
| LpnPI | CCDG | 8 cut(s) | 95, 259, 269, 270, 390, 420, 544, 562 |
| LweI | GCATC | 2 cut(s) | 386, 521 |
| MaeI | CTAG | 1 cut(s) | 8 |
| MaeII | ACGT | 1 cut(s) | 224 |
| MalI | GATC | 1 cut(s) | 494 |
| MboI | GATC | 1 cut(s) | 492 |
| MboII | GAAGA | 3 cut(s) | 458, 491, 556 |
| MfeI | CAATTG | 1 cut(s) | 242 |
| MluCI | AATT | 5 cut(s) | 159, 242, 294, 382, 539 |
| MlyI | GAGTC | 3 cut(s) | 268, 462, 482 |
| MmeI | TCCRAC | 1 cut(s) | 423 |
| MnlI | CCTC | 7 cut(s) | 96, 137, 216, 306, 442, 508, 520 |
| MseI | TTAA | 1 cut(s) | 396 |
| MslI | CAYNNNNRTG | 1 cut(s) | 529 |
| MunI | CAATTG | 1 cut(s) | 242 |
| NdeII | GATC | 1 cut(s) | 492 |
| NlaIII | CATG | 4 cut(s) | 36, 107, 349, 555 |
| NmeAIII | GCCGAG | 1 cut(s) | 178 |
| NspI | RCATGY | 1 cut(s) | 555 |
| PaeR7I | CTCGAG | 1 cut(s) | 470 |
| PfeI | GAWTC | 3 cut(s) | 116, 355, 580 |
| PleI | GAGTC | 3 cut(s) | 267, 462, 481 |
| PpsI | GAGTC | 3 cut(s) | 267, 462, 481 |
| PshAI | GACNNNNGTC | 2 cut(s) | 237, 472 |
| PspXI | VCTCGAGB | 1 cut(s) | 470 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 192, 224 |
| RsaI | GTAC | 1 cut(s) | 392 |
| RsaNI | GTAC | 1 cut(s) | 391 |
| RseI | CAYNNNNRTG | 1 cut(s) | 529 |
| SaqAI | TTAA | 1 cut(s) | 396 |
| Sau3AI | GATC | 1 cut(s) | 492 |
| ScaI | AGTACT | 1 cut(s) | 392 |
| SchI | GAGTC | 3 cut(s) | 268, 462, 482 |
| SetI | ASST | 6 cut(s) | 73, 214, 227, 326, 459, 563 |
| SfaNI | GCATC | 2 cut(s) | 386, 521 |
| Sfr274I | CTCGAG | 1 cut(s) | 470 |
| SlaI | CTCGAG | 1 cut(s) | 470 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 529 |
| SmlI | CTYRAG | 3 cut(s) | 87, 458, 470 |
| SmoI | CTYRAG | 3 cut(s) | 87, 458, 470 |
| Sse9I | AATT | 5 cut(s) | 159, 242, 294, 382, 539 |
| SspMI | CTAG | 1 cut(s) | 8 |
| StyI | CCWWGG | 1 cut(s) | 359 |
| TaiI | ACGT | 1 cut(s) | 227 |
| TaqI | TCGA | 4 cut(s) | 249, 372, 423, 471 |
| TasI | AATT | 5 cut(s) | 159, 242, 294, 382, 539 |
| TatI | WGTACW | 1 cut(s) | 390 |
| TfiI | GAWTC | 3 cut(s) | 116, 355, 580 |
| Tru1I | TTAA | 1 cut(s) | 396 |
| Tru9I | TTAA | 1 cut(s) | 396 |
| TscAI | CASTG | 1 cut(s) | 289 |
| TspDTI | ATGAA | 4 cut(s) | 63, 155, 331, 501 |
| TspRI | CASTG | 1 cut(s) | 289 |
| XapI | RAATTY | 1 cut(s) | 382 |
| XceI | RCATGY | 1 cut(s) | 555 |
| XhoI | CTCGAG | 1 cut(s) | 470 |
| XspI | CTAG | 1 cut(s) | 8 |
| ZrmI | AGTACT | 1 cut(s) | 392 |