f-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G56400 AT1G56400 AT2G17305 AT3G29830 AT3G29830 AT3G62230 AT5G54820 |
| fragaria_vesca | FvH4_7g19741 |
| malus_domestica | MD03G1208600.v1.1 MD11G1222600.v1.1 MD11G1222800.v1.1 MD11G1223200.v1.1 |
| prunus_persica | Prupe.4G208100_v2.0.a1 Prupe.4G208200_v2.0.a1 Prupe.4G208300_v2.0.a1 |
| pyrus_communis | pycom03g15720 pycom03g15760 pycom11g19660 |
| rosa_chinensis | RchiOBHm_Chr1g0363631 RchiOBHm_Chr7g0214121 |
| rosa_laevigata | RLG00000008357 RLG00000027555 |
| rosa_multiflora | Rmu_sc0000548.1_g000010 Rmu_sc0000675.1_g000034 |
| rosa_roxburghii | Rroxscaffold_4G00293030 |
| rosa_rugosa | Rorug01G0308300 |
| rosa_samantha | Rh1AG089100 Rh1AG317200 Rh1BG280600 Rh1CG296700 Rh1DG311800 Rh4AG168100 Rh4BG165000 |
| rosa_wichuraiana | Rw1G006910 Rw1G028130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 412 |
| AccB1I | GGYRCC | 1 cut(s) | 712 |
| AccII | CGCG | 2 cut(s) | 322, 324 |
| AciI | CCGC | 4 cut(s) | 71, 324, 724, 975 |
| AclWI | GGATC | 2 cut(s) | 350, 843 |
| AcoI | YGGCCR | 1 cut(s) | 1231 |
| AcsI | RAATTY | 1 cut(s) | 134 |
| AcuI | CTGAAG | 2 cut(s) | 66, 884 |
| AcyI | GRCGYC | 1 cut(s) | 115 |
| AfaI | GTAC | 5 cut(s) | 728, 1104, 1136, 1167, 1189 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 70, 947 |
| AflIII | ACRYGT | 1 cut(s) | 6 |
| AhlI | ACTAGT | 1 cut(s) | 1069 |
| AjnI | CCWGG | 1 cut(s) | 271 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 318, 350 |
| AluBI | AGCT | 6 cut(s) | 191, 660, 770, 1040, 1273, 1343 |
| AluI | AGCT | 6 cut(s) | 191, 660, 770, 1040, 1273, 1343 |
| Alw21I | GWGCWC | 1 cut(s) | 1242 |
| Alw26I | GTCTC | 2 cut(s) | 1060, 1186 |
| AlwI | GGATC | 2 cut(s) | 350, 843 |
| Ama87I | CYCGRG | 2 cut(s) | 485, 806 |
| AoxI | GGCC | 2 cut(s) | 622, 1231 |
| ApeKI | GCWGC | 1 cut(s) | 1295 |
| ApoI | RAATTY | 1 cut(s) | 134 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1248, 1342 |
| AspLEI | GCGC | 1 cut(s) | 324 |
| AspS9I | GGNCC | 1 cut(s) | 972 |
| AsuHPI | GGTGA | 1 cut(s) | 1183 |
| AvaI | CYCGRG | 2 cut(s) | 485, 806 |
| AvaII | GGWCC | 1 cut(s) | 972 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1118, 1151 |
| BalI | TGGCCA | 1 cut(s) | 1233 |
| BanI | GGYRCC | 1 cut(s) | 712 |
| Bbv12I | GWGCWC | 1 cut(s) | 1242 |
| BbvI | GCAGC | 1 cut(s) | 1282 |
| BccI | CCATC | 5 cut(s) | 36, 93, 367, 614, 1055 |
| BceAI | ACGGC | 1 cut(s) | 1212 |
| BciT130I | CCWGG | 1 cut(s) | 273 |
| BcoDI | GTCTC | 2 cut(s) | 1060, 1186 |
| BcuI | ACTAGT | 1 cut(s) | 1069 |
| BfaI | CTAG | 4 cut(s) | 180, 338, 380, 1070 |
| BfuAI | ACCTGC | 1 cut(s) | 412 |
| BisI | GCNGC | 1 cut(s) | 1296 |
| BlsI | GCNGC | 1 cut(s) | 1297 |
| Bme1390I | CCNGG | 1 cut(s) | 273 |
| Bme18I | GGWCC | 1 cut(s) | 972 |
| BmeT110I | CYCGRG | 2 cut(s) | 485, 806 |
| BmgT120I | GGNCC | 1 cut(s) | 972 |
| BmiI | GGNNCC | 1 cut(s) | 714 |
| BmrFI | CCNGG | 1 cut(s) | 273 |
| BmsI | GCATC | 1 cut(s) | 523 |
| BpuEI | CTTGAG | 2 cut(s) | 76, 667 |
| BsaBI | GATNNNNATC | 1 cut(s) | 225 |
| BsaHI | GRCGYC | 1 cut(s) | 115 |
| BsaJI | CCNNGG | 2 cut(s) | 695, 1228 |
| BsaWI | WCCGGW | 2 cut(s) | 1093, 1129 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 318, 348 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 70, 947 |
| Bse1I | ACTGG | 1 cut(s) | 218 |
| Bse3DI | GCAATG | 2 cut(s) | 578, 984 |
| Bse8I | GATNNNNATC | 1 cut(s) | 225 |
| BseBI | CCWGG | 1 cut(s) | 273 |
| BseDI | CCNNGG | 2 cut(s) | 695, 1228 |
| BseGI | GGATG | 2 cut(s) | 1047, 1102 |
| BseJI | GATNNNNATC | 1 cut(s) | 225 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 70, 947 |
| BseMI | GCAATG | 2 cut(s) | 578, 984 |
| BseMII | CTCAG | 9 cut(s) | 27, 434, 475, 584, 678, 959, 997, 1030, 1076 |
| BseNI | ACTGG | 1 cut(s) | 218 |
| BseRI | GAGGAG | 4 cut(s) | 830, 842, 1004, 1300 |
| BseXI | GCAGC | 1 cut(s) | 1282 |
| BseYI | CCCAGC | 1 cut(s) | 770 |
| BsgI | GTGCAG | 1 cut(s) | 186 |
| Bsh1236I | CGCG | 2 cut(s) | 322, 324 |
| BshFI | GGCC | 2 cut(s) | 624, 1233 |
| BshNI | GGYRCC | 1 cut(s) | 712 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1242 |
| BsiHKCI | CYCGRG | 2 cut(s) | 485, 806 |
| BsiSI | CCGG | 2 cut(s) | 1094, 1130 |
| BslFI | GGGAC | 2 cut(s) | 757, 1043 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 70, 947 |
| BsmAI | GTCTC | 2 cut(s) | 1060, 1186 |
| BsmFI | GGGAC | 2 cut(s) | 757, 1043 |
| BsnI | GGCC | 2 cut(s) | 624, 1233 |
| BsoBI | CYCGRG | 2 cut(s) | 485, 806 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1242 |
| Bsp1407I | TGTACA | 1 cut(s) | 1165 |
| Bsp143I | GATC | 3 cut(s) | 355, 835, 1075 |
| BspACI | CCGC | 4 cut(s) | 71, 324, 724, 975 |
| BspANI | GGCC | 2 cut(s) | 624, 1233 |
| BspCNI | CTCAG | 9 cut(s) | 26, 433, 474, 585, 679, 960, 996, 1029, 1075 |
| BspFNI | CGCG | 2 cut(s) | 322, 324 |
| BspLI | GGNNCC | 1 cut(s) | 714 |
| BspMI | ACCTGC | 1 cut(s) | 412 |
| BspPI | GGATC | 2 cut(s) | 350, 843 |
| BspQI | GCTCTTC | 1 cut(s) | 1333 |
| BspT107I | GGYRCC | 1 cut(s) | 712 |
| BsrDI | GCAATG | 2 cut(s) | 578, 984 |
| BsrGI | TGTACA | 1 cut(s) | 1165 |
| BsrI | ACTGG | 1 cut(s) | 218 |
| BssECI | CCNNGG | 2 cut(s) | 695, 1228 |
| BssMI | GATC | 3 cut(s) | 355, 835, 1075 |
| BssNI | GRCGYC | 1 cut(s) | 115 |
| BssT1I | CCWWGG | 1 cut(s) | 695 |
| Bst2UI | CCWGG | 1 cut(s) | 273 |
| Bst4CI | ACNGT | 1 cut(s) | 883 |
| Bst6I | CTCTTC | 2 cut(s) | 777, 1333 |
| BstACI | GRCGYC | 1 cut(s) | 115 |
| BstAUI | TGTACA | 1 cut(s) | 1165 |
| BstC8I | GCNNGC | 2 cut(s) | 73, 1038 |
| BstDSI | CCRYGG | 1 cut(s) | 1228 |
| BstF5I | GGATG | 2 cut(s) | 1047, 1102 |
| BstFNI | CGCG | 2 cut(s) | 322, 324 |
| BstHHI | GCGC | 1 cut(s) | 324 |
| BstKTI | GATC | 3 cut(s) | 358, 838, 1078 |
| BstMAI | GTCTC | 2 cut(s) | 1060, 1186 |
| BstMBI | GATC | 3 cut(s) | 355, 835, 1075 |
| BstNI | CCWGG | 1 cut(s) | 273 |
| BstNSI | RCATGY | 1 cut(s) | 10 |
| BstSCI | CCNGG | 1 cut(s) | 271 |
| BstUI | CGCG | 2 cut(s) | 322, 324 |
| BstV1I | GCAGC | 1 cut(s) | 1282 |
| BstX2I | RGATCY | 1 cut(s) | 835 |
| BstYI | RGATCY | 1 cut(s) | 835 |
| BsuRI | GGCC | 2 cut(s) | 624, 1233 |
| BtgI | CCRYGG | 1 cut(s) | 1228 |
| BtsCI | GGATG | 2 cut(s) | 1047, 1102 |
| BtsI | GCAGTG | 1 cut(s) | 528 |
| BtsIMutI | CAGTG | 1 cut(s) | 528 |
| BveI | ACCTGC | 1 cut(s) | 412 |
| Cac8I | GCNNGC | 2 cut(s) | 73, 1038 |
| CfoI | GCGC | 1 cut(s) | 324 |
| Cfr13I | GGNCC | 1 cut(s) | 972 |
| CseI | GACGC | 1 cut(s) | 104 |
| Csp6I | GTAC | 5 cut(s) | 727, 1103, 1135, 1166, 1188 |
| CviAII | CATG | 7 cut(s) | 7, 363, 437, 682, 730, 1109, 1235 |
| CviQI | GTAC | 5 cut(s) | 727, 1103, 1135, 1166, 1188 |
| DpnI | GATC | 3 cut(s) | 357, 837, 1077 |
| DpnII | GATC | 3 cut(s) | 355, 835, 1075 |
| EaeI | YGGCCR | 1 cut(s) | 1231 |
| Eam1104I | CTCTTC | 2 cut(s) | 777, 1333 |
| EarI | CTCTTC | 2 cut(s) | 777, 1333 |
| Eco130I | CCWWGG | 1 cut(s) | 695 |
| Eco32I | GATATC | 2 cut(s) | 763, 924 |
| Eco47I | GGWCC | 1 cut(s) | 972 |
| Eco57I | CTGAAG | 2 cut(s) | 66, 884 |
| Eco88I | CYCGRG | 2 cut(s) | 485, 806 |
| EcoRII | CCWGG | 1 cut(s) | 271 |
| EcoRV | GATATC | 2 cut(s) | 763, 924 |
| EcoT14I | CCWWGG | 1 cut(s) | 695 |
| ErhI | CCWWGG | 1 cut(s) | 695 |
| FaeI | CATG | 7 cut(s) | 10, 366, 440, 685, 733, 1112, 1238 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1205, 1237 |
| FaqI | GGGAC | 2 cut(s) | 757, 1043 |
| FatI | CATG | 7 cut(s) | 6, 362, 436, 681, 729, 1108, 1234 |
| FauI | CCCGC | 1 cut(s) | 64 |
| FauNDI | CATATG | 2 cut(s) | 409, 1369 |
| Fnu4HI | GCNGC | 1 cut(s) | 1296 |
| FokI | GGATG | 2 cut(s) | 1034, 1109 |
| Fsp4HI | GCNGC | 1 cut(s) | 1296 |
| FspBI | CTAG | 4 cut(s) | 180, 338, 380, 1070 |
| GlaI | GCGC | 1 cut(s) | 323 |
| GluI | GCNGC | 1 cut(s) | 1296 |
| GsaI | CCCAGC | 1 cut(s) | 774 |
| HaeIII | GGCC | 2 cut(s) | 624, 1233 |
| HapII | CCGG | 2 cut(s) | 1094, 1130 |
| HgaI | GACGC | 1 cut(s) | 104 |
| HhaI | GCGC | 1 cut(s) | 324 |
| Hin1I | GRCGYC | 1 cut(s) | 115 |
| Hin1II | CATG | 7 cut(s) | 10, 366, 440, 685, 733, 1112, 1238 |
| Hin6I | GCGC | 1 cut(s) | 322 |
| HinP1I | GCGC | 1 cut(s) | 322 |
| HincII | GTYRAC | 2 cut(s) | 963, 1091 |
| HindII | GTYRAC | 2 cut(s) | 963, 1091 |
| HindIII | AAGCTT | 3 cut(s) | 658, 1038, 1271 |
| HinfI | GANTC | 4 cut(s) | 449, 691, 804, 1117 |
| HpaI | GTTAAC | 1 cut(s) | 963 |
| HpaII | CCGG | 2 cut(s) | 1094, 1130 |
| HphI | GGTGA | 1 cut(s) | 1183 |
| Hpy166II | GTNNAC | 4 cut(s) | 199, 638, 963, 1091 |
| Hpy188I | TCNGA | 6 cut(s) | 355, 688, 969, 1019, 1065, 1358 |
| Hpy188III | TCNNGA | 6 cut(s) | 267, 380, 398, 446, 508, 1079 |
| Hpy8I | GTNNAC | 4 cut(s) | 199, 638, 963, 1091 |
| HpyAV | CCTTC | 7 cut(s) | 61, 243, 325, 635, 809, 818, 1079 |
| HpyCH4III | ACNGT | 1 cut(s) | 883 |
| HpyCH4IV | ACGT | 1 cut(s) | 1105 |
| HpyCH4V | TGCA | 8 cut(s) | 167, 407, 471, 521, 888, 1036, 1127, 1298 |
| HpySE526I | ACGT | 1 cut(s) | 1105 |
| Hsp92I | GRCGYC | 1 cut(s) | 115 |
| Hsp92II | CATG | 7 cut(s) | 10, 366, 440, 685, 733, 1112, 1238 |
| HspAI | GCGC | 1 cut(s) | 322 |
| KspAI | GTTAAC | 1 cut(s) | 963 |
| Kzo9I | GATC | 3 cut(s) | 355, 835, 1075 |
| LguI | GCTCTTC | 1 cut(s) | 1333 |
| Lsp1109I | GCAGC | 1 cut(s) | 1282 |
| LweI | GCATC | 1 cut(s) | 523 |
| MaeI | CTAG | 4 cut(s) | 180, 338, 380, 1070 |
| MaeII | ACGT | 1 cut(s) | 1105 |
| MaeIII | GTNAC | 3 cut(s) | 316, 934, 1178 |
| MalI | GATC | 3 cut(s) | 357, 837, 1077 |
| MboI | GATC | 3 cut(s) | 355, 835, 1075 |
| MboII | GAAGA | 5 cut(s) | 23, 308, 794, 937, 1350 |
| MflI | RGATCY | 1 cut(s) | 835 |
| MhlI | GDGCHC | 1 cut(s) | 1242 |
| MlsI | TGGCCA | 1 cut(s) | 1233 |
| MluCI | AATT | 7 cut(s) | 134, 261, 391, 478, 705, 1200, 1314 |
| MluNI | TGGCCA | 1 cut(s) | 1233 |
| MlyI | GAGTC | 2 cut(s) | 798, 1111 |
| MmeI | TCCRAC | 2 cut(s) | 509, 759 |
| Mox20I | TGGCCA | 1 cut(s) | 1233 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1248, 1342 |
| MscI | TGGCCA | 1 cut(s) | 1233 |
| MseI | TTAA | 5 cut(s) | 138, 566, 653, 962, 1005 |
| MslI | CAYNNNNRTG | 1 cut(s) | 893 |
| Msp20I | TGGCCA | 1 cut(s) | 1233 |
| MspI | CCGG | 2 cut(s) | 1094, 1130 |
| MspR9I | CCNGG | 1 cut(s) | 273 |
| MvaI | CCWGG | 1 cut(s) | 273 |
| MvnI | CGCG | 2 cut(s) | 322, 324 |
| NdeI | CATATG | 2 cut(s) | 409, 1369 |
| NdeII | GATC | 3 cut(s) | 355, 835, 1075 |
| NlaIII | CATG | 7 cut(s) | 10, 366, 440, 685, 733, 1112, 1238 |
| NlaIV | GGNNCC | 1 cut(s) | 714 |
| NspI | RCATGY | 1 cut(s) | 10 |
| PaeR7I | CTCGAG | 1 cut(s) | 806 |
| PciI | ACATGT | 1 cut(s) | 6 |
| PciSI | GCTCTTC | 1 cut(s) | 1333 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1248, 1342 |
| PfeI | GAWTC | 2 cut(s) | 449, 691 |
| PkrI | GCNGC | 1 cut(s) | 1297 |
| PleI | GAGTC | 2 cut(s) | 798, 1111 |
| PpsI | GAGTC | 2 cut(s) | 798, 1111 |
| PscI | ACATGT | 1 cut(s) | 6 |
| Psp6I | CCWGG | 1 cut(s) | 271 |
| PspFI | CCCAGC | 1 cut(s) | 770 |
| PspGI | CCWGG | 1 cut(s) | 271 |
| PspN4I | GGNNCC | 1 cut(s) | 714 |
| PspPI | GGNCC | 1 cut(s) | 972 |
| PspXI | VCTCGAGB | 1 cut(s) | 806 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 528, 560 |
| PsuI | RGATCY | 1 cut(s) | 835 |
| RsaI | GTAC | 5 cut(s) | 728, 1104, 1136, 1167, 1189 |
| RsaNI | GTAC | 5 cut(s) | 727, 1103, 1135, 1166, 1188 |
| RseI | CAYNNNNRTG | 1 cut(s) | 893 |
| SapI | GCTCTTC | 1 cut(s) | 1333 |
| SaqAI | TTAA | 5 cut(s) | 138, 566, 653, 962, 1005 |
| SatI | GCNGC | 1 cut(s) | 1296 |
| Sau3AI | GATC | 3 cut(s) | 355, 835, 1075 |
| Sau96I | GGNCC | 1 cut(s) | 972 |
| SchI | GAGTC | 2 cut(s) | 798, 1111 |
| ScrFI | CCNGG | 1 cut(s) | 273 |
| SduI | GDGCHC | 1 cut(s) | 1242 |
| SfaNI | GCATC | 1 cut(s) | 523 |
| Sfr274I | CTCGAG | 1 cut(s) | 806 |
| SinI | GGWCC | 1 cut(s) | 972 |
| SlaI | CTCGAG | 1 cut(s) | 806 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 893 |
| SmlI | CTYRAG | 3 cut(s) | 91, 646, 806 |
| SmoI | CTYRAG | 3 cut(s) | 91, 646, 806 |
| SpeI | ACTAGT | 1 cut(s) | 1069 |
| Sse9I | AATT | 7 cut(s) | 134, 261, 391, 478, 705, 1200, 1314 |
| SsiI | CCGC | 4 cut(s) | 71, 324, 724, 975 |
| SspI | AATATT | 1 cut(s) | 130 |
| SspMI | CTAG | 4 cut(s) | 180, 338, 380, 1070 |
| StyD4I | CCNGG | 1 cut(s) | 271 |
| StyI | CCWWGG | 1 cut(s) | 695 |
| TaaI | ACNGT | 1 cut(s) | 883 |
| TaiI | ACGT | 1 cut(s) | 1108 |
| TaqI | TCGA | 6 cut(s) | 268, 585, 759, 765, 807, 1242 |
| TasI | AATT | 7 cut(s) | 134, 261, 391, 478, 705, 1200, 1314 |
| TatI | WGTACW | 1 cut(s) | 1165 |
| TfiI | GAWTC | 2 cut(s) | 449, 691 |
| Tru1I | TTAA | 5 cut(s) | 138, 566, 653, 962, 1005 |
| Tru9I | TTAA | 5 cut(s) | 138, 566, 653, 962, 1005 |
| TscAI | CASTG | 1 cut(s) | 528 |
| TseI | GCWGC | 1 cut(s) | 1295 |
| TspDTI | ATGAA | 7 cut(s) | 387, 491, 667, 746, 828, 1098, 1241 |
| TspRI | CASTG | 1 cut(s) | 528 |
| VpaK11BI | GGWCC | 1 cut(s) | 972 |
| XapI | RAATTY | 1 cut(s) | 134 |
| XbaI | TCTAGA | 1 cut(s) | 379 |
| XceI | RCATGY | 1 cut(s) | 10 |
| XhoI | CTCGAG | 1 cut(s) | 806 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1248, 1342 |
| XspI | CTAG | 4 cut(s) | 180, 338, 380, 1070 |