Extensin-2-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g09800 |
| prunus_persica | Prupe.4G245400_v2.0.a1 Prupe.4G245500_v2.0.a1 |
| pyrus_communis | pycom03g13480 |
| rosa_chinensis | RchiOBHm_Chr5g0051641 RchiOBHm_Chr5g0051651 |
| rosa_laevigata | RLG00000006362 RLG00000012790 RLG00000014729 RLG00000034869 RLG00000037111 |
| rosa_multiflora | Rmu_sc0014445.1_g000009 Rmu_ssc0000089.1_g000031 Rmu_ssc0000089.1_g000033 |
| rosa_roxburghii | Rroxscaffold_1G00027110 Rroxscaffold_1G00027130 Rroxscaffold_1G00027160 |
| rosa_rugosa | Rorug05G0278500 |
| rosa_samantha | Rh5AG349900 Rh5BG361600 Rh5BG361700 Rh5CG386200 Rh5CG386300 Rh5CG386400 Rh5CG386500 Rh5DG376500 Rh5DG376600 Rh7DG483600 |
| rosa_wichuraiana | Rw0G013450 Rw0G013460 Rw5G033080 Rw5G033110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 222 |
| AciI | CCGC | 3 cut(s) | 209, 236, 251 |
| AcoI | YGGCCR | 1 cut(s) | 66 |
| AleI | CACNNNNGTG | 1 cut(s) | 74 |
| AluBI | AGCT | 1 cut(s) | 19 |
| AluI | AGCT | 1 cut(s) | 19 |
| Alw21I | GWGCWC | 1 cut(s) | 270 |
| Alw26I | GTCTC | 2 cut(s) | 125, 231 |
| Alw44I | GTGCAC | 1 cut(s) | 266 |
| AoxI | GGCC | 1 cut(s) | 66 |
| ApaLI | GTGCAC | 1 cut(s) | 266 |
| AxyI | CCTNAGG | 1 cut(s) | 10 |
| BaeGI | GKGCMC | 1 cut(s) | 270 |
| BalI | TGGCCA | 1 cut(s) | 68 |
| Bbv12I | GWGCWC | 1 cut(s) | 270 |
| BbvCI | CCTCAGC | 1 cut(s) | 20 |
| BccI | CCATC | 5 cut(s) | 202, 208, 412, 460, 466 |
| BcoDI | GTCTC | 2 cut(s) | 125, 231 |
| BisI | GCNGC | 1 cut(s) | 251 |
| BlsI | GCNGC | 1 cut(s) | 252 |
| BpmI | CTGGAG | 1 cut(s) | 483 |
| Bpu10I | CCTNAGC | 1 cut(s) | 20 |
| BsaI | GGTCTC | 1 cut(s) | 125 |
| BsaJI | CCNNGG | 1 cut(s) | 48 |
| Bse1I | ACTGG | 1 cut(s) | 500 |
| Bse21I | CCTNAGG | 1 cut(s) | 10 |
| Bse3DI | GCAATG | 1 cut(s) | 25 |
| BseDI | CCNNGG | 1 cut(s) | 48 |
| BseGI | GGATG | 1 cut(s) | 181 |
| BseMI | GCAATG | 1 cut(s) | 25 |
| BseMII | CTCAG | 2 cut(s) | 11, 24 |
| BseNI | ACTGG | 1 cut(s) | 500 |
| BseRI | GAGGAG | 8 cut(s) | 246, 267, 342, 363, 405, 480, 483, 486 |
| BseSI | GKGCMC | 1 cut(s) | 270 |
| BshFI | GGCC | 1 cut(s) | 68 |
| BsiHKAI | GWGCWC | 1 cut(s) | 270 |
| BslFI | GGGAC | 1 cut(s) | 139 |
| BsmAI | GTCTC | 2 cut(s) | 125, 231 |
| BsmFI | GGGAC | 1 cut(s) | 139 |
| BsnI | GGCC | 1 cut(s) | 68 |
| Bso31I | GGTCTC | 1 cut(s) | 125 |
| Bsp1286I | GDGCHC | 1 cut(s) | 270 |
| BspACI | CCGC | 3 cut(s) | 209, 236, 251 |
| BspANI | GGCC | 1 cut(s) | 68 |
| BspCNI | CTCAG | 2 cut(s) | 12, 23 |
| BspTNI | GGTCTC | 1 cut(s) | 125 |
| BsrDI | GCAATG | 1 cut(s) | 25 |
| BsrI | ACTGG | 1 cut(s) | 500 |
| BssECI | CCNNGG | 1 cut(s) | 48 |
| BssT1I | CCWWGG | 1 cut(s) | 48 |
| BstC8I | GCNNGC | 1 cut(s) | 81 |
| BstDEI | CTNAG | 2 cut(s) | 10, 20 |
| BstF5I | GGATG | 1 cut(s) | 181 |
| BstMAI | GTCTC | 2 cut(s) | 125, 231 |
| BstSLI | GKGCMC | 1 cut(s) | 270 |
| Bsu36I | CCTNAGG | 1 cut(s) | 10 |
| BsuRI | GGCC | 1 cut(s) | 68 |
| BtsCI | GGATG | 1 cut(s) | 181 |
| BtsIMutI | CAGTG | 1 cut(s) | 507 |
| Cac8I | GCNNGC | 1 cut(s) | 81 |
| CviJI | RGCY | 2 cut(s) | 19, 68 |
| CviKI_1 | RGCY | 2 cut(s) | 19, 68 |
| DdeI | CTNAG | 2 cut(s) | 10, 20 |
| EaeI | YGGCCR | 1 cut(s) | 66 |
| Eco130I | CCWWGG | 1 cut(s) | 48 |
| Eco31I | GGTCTC | 1 cut(s) | 125 |
| Eco81I | CCTNAGG | 1 cut(s) | 10 |
| EcoT14I | CCWWGG | 1 cut(s) | 48 |
| ErhI | CCWWGG | 1 cut(s) | 48 |
| FaqI | GGGAC | 1 cut(s) | 139 |
| FauI | CCCGC | 1 cut(s) | 216 |
| FauNDI | CATATG | 1 cut(s) | 310 |
| Fnu4HI | GCNGC | 1 cut(s) | 251 |
| FokI | GGATG | 1 cut(s) | 168 |
| Fsp4HI | GCNGC | 1 cut(s) | 251 |
| GluI | GCNGC | 1 cut(s) | 251 |
| GsuI | CTGGAG | 1 cut(s) | 483 |
| HaeIII | GGCC | 1 cut(s) | 68 |
| Hpy166II | GTNNAC | 3 cut(s) | 268, 364, 385 |
| Hpy188III | TCNNGA | 1 cut(s) | 12 |
| Hpy8I | GTNNAC | 3 cut(s) | 268, 364, 385 |
| HpyAV | CCTTC | 2 cut(s) | 249, 345 |
| HpyCH4V | TGCA | 1 cut(s) | 268 |
| HpyF3I | CTNAG | 2 cut(s) | 10, 20 |
| LpnPI | CCDG | 1 cut(s) | 513 |
| MaeIII | GTNAC | 4 cut(s) | 321, 390, 438, 507 |
| MboII | GAAGA | 1 cut(s) | 96 |
| MhlI | GDGCHC | 1 cut(s) | 270 |
| MlsI | TGGCCA | 1 cut(s) | 68 |
| MluNI | TGGCCA | 1 cut(s) | 68 |
| MmeI | TCCRAC | 1 cut(s) | 164 |
| Mox20I | TGGCCA | 1 cut(s) | 68 |
| MscI | TGGCCA | 1 cut(s) | 68 |
| MslI | CAYNNNNRTG | 1 cut(s) | 74 |
| Msp20I | TGGCCA | 1 cut(s) | 68 |
| MspA1I | CMGCKG | 1 cut(s) | 19 |
| NdeI | CATATG | 1 cut(s) | 310 |
| NmuCI | GTSAC | 4 cut(s) | 321, 390, 438, 507 |
| OliI | CACNNNNGTG | 1 cut(s) | 74 |
| PkrI | GCNGC | 1 cut(s) | 252 |
| PsiI | TTATAA | 1 cut(s) | 222 |
| PvuII | CAGCTG | 1 cut(s) | 19 |
| RseI | CAYNNNNRTG | 1 cut(s) | 74 |
| SatI | GCNGC | 1 cut(s) | 251 |
| SduI | GDGCHC | 1 cut(s) | 270 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 74 |
| SsiI | CCGC | 3 cut(s) | 209, 236, 251 |
| StyI | CCWWGG | 1 cut(s) | 48 |
| TauI | GCSGC | 1 cut(s) | 253 |
| TscAI | CASTG | 1 cut(s) | 507 |
| TseFI | GTSAC | 4 cut(s) | 321, 390, 438, 507 |
| Tsp45I | GTSAC | 4 cut(s) | 321, 390, 438, 507 |
| TspRI | CASTG | 1 cut(s) | 507 |
| VneI | GTGCAC | 1 cut(s) | 266 |