No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g09800 |
| prunus_persica | Prupe.4G245400_v2.0.a1 Prupe.4G245500_v2.0.a1 |
| pyrus_communis | pycom03g13480 |
| rosa_chinensis | RchiOBHm_Chr5g0051641 RchiOBHm_Chr5g0051651 |
| rosa_laevigata | RLG00000006362 RLG00000012790 RLG00000014729 RLG00000034869 RLG00000037111 |
| rosa_multiflora | Rmu_sc0014445.1_g000009 Rmu_ssc0000089.1_g000031 Rmu_ssc0000089.1_g000033 |
| rosa_roxburghii | Rroxscaffold_1G00027110 Rroxscaffold_1G00027130 Rroxscaffold_1G00027160 |
| rosa_rugosa | Rorug05G0278500 |
| rosa_samantha | Rh5AG349900 Rh5BG361600 Rh5BG361700 Rh5CG386200 Rh5CG386300 Rh5CG386400 Rh5CG386500 Rh5DG376500 Rh5DG376600 Rh7DG483600 |
| rosa_wichuraiana | Rw0G013450 Rw0G013460 Rw5G033080 Rw5G033110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 504, 936 |
| AfaI | GTAC | 1 cut(s) | 79 |
| AluBI | AGCT | 1 cut(s) | 74 |
| AluI | AGCT | 1 cut(s) | 74 |
| Alw21I | GWGCWC | 1 cut(s) | 192 |
| Alw26I | GTCTC | 9 cut(s) | 273, 321, 369, 417, 465, 561, 609, 1032, 1071 |
| AoxI | GGCC | 1 cut(s) | 23 |
| Bbv12I | GWGCWC | 1 cut(s) | 192 |
| BcoDI | GTCTC | 9 cut(s) | 273, 321, 369, 417, 465, 561, 609, 1032, 1071 |
| BfaI | CTAG | 1 cut(s) | 75 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 31 |
| BisI | GCNGC | 1 cut(s) | 1004 |
| BlsI | GCNGC | 1 cut(s) | 1005 |
| BmcAI | AGTACT | 1 cut(s) | 79 |
| BmiI | GGNNCC | 1 cut(s) | 7 |
| Bpu10I | CCTNAGC | 1 cut(s) | 186 |
| BsaJI | CCNNGG | 2 cut(s) | 9, 20 |
| BseDI | CCNNGG | 2 cut(s) | 9, 20 |
| BseGI | GGATG | 1 cut(s) | 247 |
| BseMII | CTCAG | 1 cut(s) | 177 |
| BshFI | GGCC | 1 cut(s) | 25 |
| BsiHKAI | GWGCWC | 1 cut(s) | 192 |
| BslFI | GGGAC | 6 cut(s) | 27, 637, 733, 829, 964, 1096 |
| BsmAI | GTCTC | 9 cut(s) | 273, 321, 369, 417, 465, 561, 609, 1032, 1071 |
| BsmFI | GGGAC | 6 cut(s) | 27, 637, 733, 829, 964, 1096 |
| BsnI | GGCC | 1 cut(s) | 25 |
| Bsp1286I | GDGCHC | 1 cut(s) | 192 |
| Bsp143I | GATC | 1 cut(s) | 815 |
| BspANI | GGCC | 1 cut(s) | 25 |
| BspCNI | CTCAG | 1 cut(s) | 178 |
| BspLI | GGNNCC | 1 cut(s) | 7 |
| BssECI | CCNNGG | 2 cut(s) | 9, 20 |
| BssMI | GATC | 1 cut(s) | 815 |
| BssNAI | GTATAC | 3 cut(s) | 358, 646, 973 |
| BssT1I | CCWWGG | 2 cut(s) | 9, 20 |
| Bst1107I | GTATAC | 3 cut(s) | 358, 646, 973 |
| Bst4CI | ACNGT | 2 cut(s) | 85, 624 |
| BstDEI | CTNAG | 2 cut(s) | 70, 186 |
| BstF5I | GGATG | 1 cut(s) | 247 |
| BstKTI | GATC | 1 cut(s) | 818 |
| BstMAI | GTCTC | 9 cut(s) | 273, 321, 369, 417, 465, 561, 609, 1032, 1071 |
| BstMBI | GATC | 1 cut(s) | 815 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 31 |
| BstNSI | RCATGY | 1 cut(s) | 242 |
| BstZ17I | GTATAC | 3 cut(s) | 358, 646, 973 |
| BsuRI | GGCC | 1 cut(s) | 25 |
| BtgZI | GCGATG | 1 cut(s) | 984 |
| BtsCI | GGATG | 1 cut(s) | 247 |
| Csp6I | GTAC | 1 cut(s) | 78 |
| CviAII | CATG | 3 cut(s) | 134, 239, 968 |
| CviJI | RGCY | 5 cut(s) | 8, 19, 25, 34, 74 |
| CviKI_1 | RGCY | 5 cut(s) | 8, 19, 25, 34, 74 |
| CviQI | GTAC | 1 cut(s) | 78 |
| DdeI | CTNAG | 2 cut(s) | 70, 186 |
| DpnI | GATC | 1 cut(s) | 817 |
| DpnII | GATC | 1 cut(s) | 815 |
| Eco130I | CCWWGG | 2 cut(s) | 9, 20 |
| Eco147I | AGGCCT | 1 cut(s) | 25 |
| EcoT14I | CCWWGG | 2 cut(s) | 9, 20 |
| ErhI | CCWWGG | 2 cut(s) | 9, 20 |
| FaeI | CATG | 3 cut(s) | 137, 242, 971 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 13, 45 |
| FaqI | GGGAC | 6 cut(s) | 27, 637, 733, 829, 964, 1096 |
| FatI | CATG | 3 cut(s) | 133, 238, 967 |
| FauI | CCCGC | 2 cut(s) | 231, 282 |
| FauNDI | CATATG | 4 cut(s) | 352, 640, 736, 1015 |
| Fnu4HI | GCNGC | 1 cut(s) | 1004 |
| FokI | GGATG | 1 cut(s) | 234 |
| Fsp4HI | GCNGC | 1 cut(s) | 1004 |
| FspBI | CTAG | 1 cut(s) | 75 |
| GluI | GCNGC | 1 cut(s) | 1004 |
| HaeIII | GGCC | 1 cut(s) | 25 |
| Hin1II | CATG | 3 cut(s) | 137, 242, 971 |
| Hpy188III | TCNNGA | 2 cut(s) | 185, 813 |
| HpyCH4III | ACNGT | 2 cut(s) | 85, 624 |
| HpyCH4IV | ACGT | 3 cut(s) | 546, 834, 882 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 31 |
| HpyF3I | CTNAG | 2 cut(s) | 70, 186 |
| HpySE526I | ACGT | 3 cut(s) | 546, 834, 882 |
| Hsp92II | CATG | 3 cut(s) | 137, 242, 971 |
| Kzo9I | GATC | 1 cut(s) | 815 |
| LmnI | GCTCC | 1 cut(s) | 5 |
| LpnPI | CCDG | 1 cut(s) | 198 |
| MaeI | CTAG | 1 cut(s) | 75 |
| MaeII | ACGT | 3 cut(s) | 546, 834, 882 |
| MaeIII | GTNAC | 4 cut(s) | 210, 330, 624, 891 |
| MalI | GATC | 1 cut(s) | 817 |
| MboI | GATC | 1 cut(s) | 815 |
| MboII | GAAGA | 1 cut(s) | 105 |
| MhlI | GDGCHC | 1 cut(s) | 192 |
| MslI | CAYNNNNRTG | 1 cut(s) | 41 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 31 |
| NdeI | CATATG | 4 cut(s) | 352, 640, 736, 1015 |
| NdeII | GATC | 1 cut(s) | 815 |
| NlaIII | CATG | 3 cut(s) | 137, 242, 971 |
| NlaIV | GGNNCC | 1 cut(s) | 7 |
| NmuCI | GTSAC | 4 cut(s) | 210, 330, 624, 891 |
| NspI | RCATGY | 1 cut(s) | 242 |
| PceI | AGGCCT | 1 cut(s) | 25 |
| PkrI | GCNGC | 1 cut(s) | 1005 |
| PsiI | TTATAA | 2 cut(s) | 504, 936 |
| PspN4I | GGNNCC | 1 cut(s) | 7 |
| RsaI | GTAC | 1 cut(s) | 79 |
| RsaNI | GTAC | 1 cut(s) | 78 |
| RseI | CAYNNNNRTG | 1 cut(s) | 41 |
| SatI | GCNGC | 1 cut(s) | 1004 |
| Sau3AI | GATC | 1 cut(s) | 815 |
| ScaI | AGTACT | 1 cut(s) | 79 |
| SduI | GDGCHC | 1 cut(s) | 192 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 41 |
| SseBI | AGGCCT | 1 cut(s) | 25 |
| SspMI | CTAG | 1 cut(s) | 75 |
| StuI | AGGCCT | 1 cut(s) | 25 |
| StyI | CCWWGG | 2 cut(s) | 9, 20 |
| TaaI | ACNGT | 2 cut(s) | 85, 624 |
| TaiI | ACGT | 3 cut(s) | 549, 837, 885 |
| TaqI | TCGA | 1 cut(s) | 814 |
| TatI | WGTACW | 1 cut(s) | 77 |
| TauI | GCSGC | 1 cut(s) | 1006 |
| TseFI | GTSAC | 4 cut(s) | 210, 330, 624, 891 |
| Tsp45I | GTSAC | 4 cut(s) | 210, 330, 624, 891 |
| TspGWI | ACGGA | 1 cut(s) | 243 |
| XceI | RCATGY | 1 cut(s) | 242 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 27 |
| XspI | CTAG | 1 cut(s) | 75 |
| ZrmI | AGTACT | 1 cut(s) | 79 |