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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g09800 |
| prunus_persica | Prupe.4G245400_v2.0.a1 Prupe.4G245500_v2.0.a1 |
| pyrus_communis | pycom03g13480 |
| rosa_chinensis | RchiOBHm_Chr5g0051641 RchiOBHm_Chr5g0051651 |
| rosa_laevigata | RLG00000006362 RLG00000012790 RLG00000014729 RLG00000034869 RLG00000037111 |
| rosa_multiflora | Rmu_sc0014445.1_g000009 Rmu_ssc0000089.1_g000031 Rmu_ssc0000089.1_g000033 |
| rosa_roxburghii | Rroxscaffold_1G00027110 Rroxscaffold_1G00027130 Rroxscaffold_1G00027160 |
| rosa_rugosa | Rorug05G0278500 |
| rosa_samantha | Rh5AG349900 Rh5BG361600 Rh5BG361700 Rh5CG386200 Rh5CG386300 Rh5CG386400 Rh5CG386500 Rh5DG376500 Rh5DG376600 Rh7DG483600 |
| rosa_wichuraiana | Rw0G013450 Rw0G013460 Rw5G033080 Rw5G033110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1327 |
| AccB1I | GGYRCC | 1 cut(s) | 1184 |
| AccII | CGCG | 1 cut(s) | 1345 |
| AfaI | GTAC | 3 cut(s) | 79, 917, 971 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1171 |
| AgsI | TTSAA | 2 cut(s) | 1270, 1318 |
| AjiI | CACGTC | 2 cut(s) | 1151, 1377 |
| AjnI | CCWGG | 1 cut(s) | 9 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1401, 1433 |
| AluBI | AGCT | 6 cut(s) | 74, 1232, 1412, 1437, 1445, 1451 |
| AluI | AGCT | 6 cut(s) | 74, 1232, 1412, 1437, 1445, 1451 |
| Alw21I | GWGCWC | 3 cut(s) | 192, 1266, 1376 |
| AoxI | GGCC | 1 cut(s) | 23 |
| AspLEI | GCGC | 1 cut(s) | 1347 |
| AspS9I | GGNCC | 1 cut(s) | 1422 |
| AsuC2I | CCSGG | 1 cut(s) | 1322 |
| AsuNHI | GCTAGC | 1 cut(s) | 1139 |
| AvaII | GGWCC | 1 cut(s) | 1422 |
| BanI | GGYRCC | 1 cut(s) | 1184 |
| BauI | CACGAG | 1 cut(s) | 1395 |
| Bbv12I | GWGCWC | 3 cut(s) | 192, 1266, 1376 |
| BceAI | ACGGC | 1 cut(s) | 1293 |
| BciT130I | CCWGG | 1 cut(s) | 11 |
| BcnI | CCSGG | 1 cut(s) | 1322 |
| BfaI | CTAG | 3 cut(s) | 75, 1140, 1446 |
| BfuAI | ACCTGC | 1 cut(s) | 1327 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 31 |
| BlpI | GCTNAGC | 1 cut(s) | 186 |
| BmcAI | AGTACT | 1 cut(s) | 79 |
| Bme1390I | CCNGG | 2 cut(s) | 11, 1322 |
| Bme18I | GGWCC | 1 cut(s) | 1422 |
| BmgBI | CACGTC | 2 cut(s) | 1151, 1377 |
| BmgT120I | GGNCC | 1 cut(s) | 1422 |
| BmiI | GGNNCC | 2 cut(s) | 1186, 1341 |
| BmrFI | CCNGG | 2 cut(s) | 11, 1322 |
| BmtI | GCTAGC | 1 cut(s) | 1143 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 186 |
| BpuMI | CCSGG | 1 cut(s) | 1322 |
| BsaJI | CCNNGG | 3 cut(s) | 9, 10, 20 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1401, 1431 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1171 |
| Bse1I | ACTGG | 1 cut(s) | 1123 |
| Bse3DI | GCAATG | 1 cut(s) | 1305 |
| BseBI | CCWGG | 1 cut(s) | 11 |
| BseDI | CCNNGG | 3 cut(s) | 9, 10, 20 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1171 |
| BseMI | GCAATG | 1 cut(s) | 1305 |
| BseMII | CTCAG | 1 cut(s) | 177 |
| BseNI | ACTGG | 1 cut(s) | 1123 |
| BsgI | GTGCAG | 1 cut(s) | 1355 |
| Bsh1236I | CGCG | 1 cut(s) | 1345 |
| BshFI | GGCC | 1 cut(s) | 25 |
| BshNI | GGYRCC | 1 cut(s) | 1184 |
| BsiHKAI | GWGCWC | 3 cut(s) | 192, 1266, 1376 |
| BsiSI | CCGG | 1 cut(s) | 1322 |
| BslFI | GGGAC | 3 cut(s) | 27, 769, 817 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1171 |
| BsmFI | GGGAC | 3 cut(s) | 27, 769, 817 |
| BsnI | GGCC | 1 cut(s) | 25 |
| Bsp1286I | GDGCHC | 3 cut(s) | 192, 1266, 1376 |
| Bsp1407I | TGTACA | 1 cut(s) | 969 |
| Bsp143I | GATC | 1 cut(s) | 1194 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 186 |
| BspANI | GGCC | 1 cut(s) | 25 |
| BspCNI | CTCAG | 1 cut(s) | 178 |
| BspFNI | CGCG | 1 cut(s) | 1345 |
| BspLI | GGNNCC | 2 cut(s) | 1186, 1341 |
| BspMI | ACCTGC | 1 cut(s) | 1327 |
| BspOI | GCTAGC | 1 cut(s) | 1143 |
| BspT107I | GGYRCC | 1 cut(s) | 1184 |
| BsrDI | GCAATG | 1 cut(s) | 1305 |
| BsrGI | TGTACA | 1 cut(s) | 969 |
| BsrI | ACTGG | 1 cut(s) | 1123 |
| BssECI | CCNNGG | 3 cut(s) | 9, 10, 20 |
| BssMI | GATC | 1 cut(s) | 1194 |
| BssNAI | GTATAC | 2 cut(s) | 298, 442 |
| BssSI | CACGAG | 1 cut(s) | 1395 |
| BssT1I | CCWWGG | 1 cut(s) | 20 |
| Bst1107I | GTATAC | 2 cut(s) | 298, 442 |
| Bst2BI | CACGAG | 1 cut(s) | 1395 |
| Bst2UI | CCWGG | 1 cut(s) | 11 |
| Bst4CI | ACNGT | 4 cut(s) | 85, 915, 948, 1432 |
| Bst6I | CTCTTC | 1 cut(s) | 1357 |
| BstAUI | TGTACA | 1 cut(s) | 969 |
| BstC8I | GCNNGC | 2 cut(s) | 1141, 1358 |
| BstDEI | CTNAG | 3 cut(s) | 70, 186, 1166 |
| BstFNI | CGCG | 1 cut(s) | 1345 |
| BstHHI | GCGC | 1 cut(s) | 1347 |
| BstKTI | GATC | 1 cut(s) | 1197 |
| BstMBI | GATC | 1 cut(s) | 1194 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 31, 1342, 1353 |
| BstNI | CCWGG | 1 cut(s) | 11 |
| BstSCI | CCNGG | 2 cut(s) | 9, 1320 |
| BstUI | CGCG | 1 cut(s) | 1345 |
| BstZ17I | GTATAC | 2 cut(s) | 298, 442 |
| BsuRI | GGCC | 1 cut(s) | 25 |
| BtrI | CACGTC | 2 cut(s) | 1151, 1377 |
| BtsIMutI | CAGTG | 1 cut(s) | 1116 |
| BveI | ACCTGC | 1 cut(s) | 1327 |
| Cac8I | GCNNGC | 2 cut(s) | 1141, 1358 |
| CfoI | GCGC | 1 cut(s) | 1347 |
| Cfr13I | GGNCC | 1 cut(s) | 1422 |
| CpoI | CGGWCCG | 1 cut(s) | 1422 |
| Csp6I | GTAC | 3 cut(s) | 78, 916, 970 |
| CspI | CGGWCCG | 1 cut(s) | 1422 |
| CviQI | GTAC | 3 cut(s) | 78, 916, 970 |
| DdeI | CTNAG | 3 cut(s) | 70, 186, 1166 |
| DpnI | GATC | 1 cut(s) | 1196 |
| DpnII | GATC | 1 cut(s) | 1194 |
| Eam1104I | CTCTTC | 1 cut(s) | 1357 |
| EarI | CTCTTC | 1 cut(s) | 1357 |
| EciI | GGCGGA | 3 cut(s) | 297, 1071, 1295 |
| Eco130I | CCWWGG | 1 cut(s) | 20 |
| Eco147I | AGGCCT | 1 cut(s) | 25 |
| Eco47I | GGWCC | 1 cut(s) | 1422 |
| EcoRII | CCWGG | 1 cut(s) | 9 |
| EcoT14I | CCWWGG | 1 cut(s) | 20 |
| ErhI | CCWWGG | 1 cut(s) | 20 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 13, 45 |
| FaqI | GGGAC | 3 cut(s) | 27, 769, 817 |
| FauNDI | CATATG | 5 cut(s) | 292, 436, 772, 820, 1012 |
| FspBI | CTAG | 3 cut(s) | 75, 1140, 1446 |
| GlaI | GCGC | 1 cut(s) | 1346 |
| HaeIII | GGCC | 1 cut(s) | 25 |
| HapII | CCGG | 1 cut(s) | 1322 |
| HhaI | GCGC | 1 cut(s) | 1347 |
| Hin6I | GCGC | 1 cut(s) | 1345 |
| HinP1I | GCGC | 1 cut(s) | 1345 |
| HincII | GTYRAC | 1 cut(s) | 1275 |
| HindII | GTYRAC | 1 cut(s) | 1275 |
| HinfI | GANTC | 5 cut(s) | 164, 1199, 1224, 1290, 1391 |
| HpaII | CCGG | 1 cut(s) | 1322 |
| Hpy188I | TCNGA | 4 cut(s) | 1229, 1295, 1371, 1422 |
| Hpy99I | CGWCG | 2 cut(s) | 1381, 1384 |
| HpyCH4III | ACNGT | 4 cut(s) | 85, 915, 948, 1432 |
| HpyCH4IV | ACGT | 3 cut(s) | 870, 1150, 1376 |
| HpyCH4V | TGCA | 1 cut(s) | 1336 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 31, 1342, 1353 |
| HpyF3I | CTNAG | 3 cut(s) | 70, 186, 1166 |
| HpySE526I | ACGT | 3 cut(s) | 870, 1150, 1376 |
| HspAI | GCGC | 1 cut(s) | 1345 |
| Kzo9I | GATC | 1 cut(s) | 1194 |
| LmnI | GCTCC | 3 cut(s) | 1261, 1295, 1409 |
| LpnPI | CCDG | 6 cut(s) | 23, 1104, 1197, 1272, 1322, 1335 |
| MaeI | CTAG | 3 cut(s) | 75, 1140, 1446 |
| MaeII | ACGT | 3 cut(s) | 870, 1150, 1376 |
| MaeIII | GTNAC | 4 cut(s) | 210, 879, 948, 1071 |
| MalI | GATC | 1 cut(s) | 1196 |
| MboI | GATC | 1 cut(s) | 1194 |
| MboII | GAAGA | 3 cut(s) | 105, 1315, 1374 |
| MhlI | GDGCHC | 3 cut(s) | 192, 1266, 1376 |
| MluCI | AATT | 1 cut(s) | 1326 |
| MlyI | GAGTC | 2 cut(s) | 1208, 1284 |
| MslI | CAYNNNNRTG | 2 cut(s) | 41, 1190 |
| MspI | CCGG | 1 cut(s) | 1322 |
| MspR9I | CCNGG | 2 cut(s) | 11, 1322 |
| MvaI | CCWGG | 1 cut(s) | 11 |
| MvnI | CGCG | 1 cut(s) | 1345 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 31, 1342, 1353 |
| NciI | CCSGG | 1 cut(s) | 1322 |
| NdeI | CATATG | 5 cut(s) | 292, 436, 772, 820, 1012 |
| NdeII | GATC | 1 cut(s) | 1194 |
| NheI | GCTAGC | 1 cut(s) | 1139 |
| NlaIV | GGNNCC | 2 cut(s) | 1186, 1341 |
| NmuCI | GTSAC | 4 cut(s) | 210, 879, 948, 1071 |
| PasI | CCCWGGG | 1 cut(s) | 10 |
| PceI | AGGCCT | 1 cut(s) | 25 |
| PfeI | GAWTC | 3 cut(s) | 164, 1224, 1391 |
| PleI | GAGTC | 2 cut(s) | 1207, 1284 |
| PpsI | GAGTC | 2 cut(s) | 1207, 1284 |
| Psp6I | CCWGG | 1 cut(s) | 9 |
| PspGI | CCWGG | 1 cut(s) | 9 |
| PspN4I | GGNNCC | 2 cut(s) | 1186, 1341 |
| PspPI | GGNCC | 1 cut(s) | 1422 |
| RsaI | GTAC | 3 cut(s) | 79, 917, 971 |
| RsaNI | GTAC | 3 cut(s) | 78, 916, 970 |
| RseI | CAYNNNNRTG | 2 cut(s) | 41, 1190 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1422 |
| RsrII | CGGWCCG | 1 cut(s) | 1422 |
| Sau3AI | GATC | 1 cut(s) | 1194 |
| Sau96I | GGNCC | 1 cut(s) | 1422 |
| ScaI | AGTACT | 1 cut(s) | 79 |
| SchI | GAGTC | 2 cut(s) | 1208, 1284 |
| ScrFI | CCNGG | 2 cut(s) | 11, 1322 |
| SduI | GDGCHC | 3 cut(s) | 192, 1266, 1376 |
| SinI | GGWCC | 1 cut(s) | 1422 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 41, 1190 |
| Sse9I | AATT | 1 cut(s) | 1326 |
| SseBI | AGGCCT | 1 cut(s) | 25 |
| SspMI | CTAG | 3 cut(s) | 75, 1140, 1446 |
| StuI | AGGCCT | 1 cut(s) | 25 |
| StyD4I | CCNGG | 2 cut(s) | 9, 1320 |
| StyI | CCWWGG | 1 cut(s) | 20 |
| TaaI | ACNGT | 4 cut(s) | 85, 915, 948, 1432 |
| TaiI | ACGT | 3 cut(s) | 873, 1153, 1379 |
| TaqI | TCGA | 3 cut(s) | 1197, 1252, 1389 |
| TaqII | GACCGA | 1 cut(s) | 1439 |
| TasI | AATT | 1 cut(s) | 1326 |
| TatI | WGTACW | 2 cut(s) | 77, 969 |
| TfiI | GAWTC | 3 cut(s) | 164, 1224, 1391 |
| TscAI | CASTG | 1 cut(s) | 1123 |
| TseFI | GTSAC | 4 cut(s) | 210, 879, 948, 1071 |
| Tsp45I | GTSAC | 4 cut(s) | 210, 879, 948, 1071 |
| TspDTI | ATGAA | 2 cut(s) | 177, 1316 |
| TspGWI | ACGGA | 2 cut(s) | 1192, 1325 |
| TspRI | CASTG | 1 cut(s) | 1123 |
| VpaK11BI | GGWCC | 1 cut(s) | 1422 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 27 |
| XspI | CTAG | 3 cut(s) | 75, 1140, 1446 |
| ZrmI | AGTACT | 1 cut(s) | 79 |