Belongs to the glycosyl hydrolase 31 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G63840 AT5G63840 |
| fragaria_vesca | FvH4_1g25070 |
| malus_domestica | MD01G1007800.v1.1 MD01G1007900.v1.1 MD15G1135800.v1.1 |
| prunus_persica | Prupe.4G277800_v2.0.a1 Prupe.4G277800_v2.0.a1 |
| pyrus_communis | pycom15g12240 pycom520g00330 |
| rosa_chinensis | RchiOBHm_Chr2g0122711 RchiOBHm_Chr2g0122721 |
| rosa_laevigata | RLG00000018707 RLG00000018709 |
| rosa_multiflora | Rmu_sc0005370.1_g000002 Rmu_sc0008259.1_g000009 Rmu_sc0008259.1_g000014 Rmu_sc0017734.1_g000006 Rmu_sc0026486.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00031190 Rroxscaffold_2G00121270 Rroxscaffold_2G00121280 Rroxscaffold_4G00297410 Rroxscaffold_4G00317480 Rroxscaffold_4G00325980 Rroxscaffold_7G00197700 Rroxscaffold_7G00199130 |
| rosa_rugosa | Rorug02G0241800 Rorug02G0241800 Rorug02G0241900 Rorug02G0242000 Rorug02G0242100 |
| rosa_samantha | Rh2AG300300 Rh2BG308200 Rh2CG286400 Rh2CG286900 Rh2DG324500 |
| rosa_wichuraiana | Rw2G023850 Rw2G023860 Rw2G024040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1119 |
| Acc36I | ACCTGC | 2 cut(s) | 998, 1119 |
| Acc65I | GGTACC | 1 cut(s) | 443 |
| AccB1I | GGYRCC | 3 cut(s) | 443, 1931, 2557 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2305 |
| AccI | GTMKAC | 3 cut(s) | 459, 510, 1067 |
| AccII | CGCG | 2 cut(s) | 537, 871 |
| AclWI | GGATC | 7 cut(s) | 305, 329, 491, 989, 1328, 1809, 2399 |
| AcoI | YGGCCR | 2 cut(s) | 198, 2572 |
| AcsI | RAATTY | 5 cut(s) | 550, 569, 1502, 2199, 2486 |
| AcuI | CTGAAG | 3 cut(s) | 2211, 2469, 2574 |
| AfaI | GTAC | 2 cut(s) | 445, 1544 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 259, 684, 746, 825, 2305, 2340 |
| AflII | CTTAAG | 1 cut(s) | 301 |
| AflIII | ACRYGT | 1 cut(s) | 2046 |
| AgeI | ACCGGT | 1 cut(s) | 2370 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1839 |
| AjnI | CCWGG | 7 cut(s) | 74, 751, 1039, 1487, 2239, 2252, 2569 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 335, 367, 807, 839 |
| Alw21I | GWGCWC | 3 cut(s) | 195, 1188, 2650 |
| Alw26I | GTCTC | 1 cut(s) | 416 |
| AlwI | GGATC | 7 cut(s) | 305, 329, 491, 989, 1328, 1809, 2399 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 99, 950, 1868, 1901 |
| Ama87I | CYCGRG | 4 cut(s) | 129, 377, 926, 1586 |
| ApeKI | GCWGC | 3 cut(s) | 902, 1301, 2444 |
| ApoI | RAATTY | 5 cut(s) | 550, 569, 1502, 2199, 2486 |
| AsiGI | ACCGGT | 1 cut(s) | 2370 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 350 |
| Asp718I | GGTACC | 1 cut(s) | 443 |
| AsuC2I | CCSGG | 1 cut(s) | 883 |
| AsuHPI | GGTGA | 8 cut(s) | 200, 611, 1112, 1715, 1796, 2410, 2465, 2782 |
| AsuII | TTCGAA | 1 cut(s) | 386 |
| AvaI | CYCGRG | 4 cut(s) | 129, 377, 926, 1586 |
| AvaII | GGWCC | 8 cut(s) | 322, 749, 1037, 1485, 1583, 1776, 2295, 2690 |
| AxyI | CCTNAGG | 2 cut(s) | 1047, 1808 |
| BalI | TGGCCA | 1 cut(s) | 2574 |
| BanI | GGYRCC | 3 cut(s) | 443, 1931, 2557 |
| BanII | GRGCYC | 4 cut(s) | 130, 136, 195, 1692 |
| BauI | CACGAG | 1 cut(s) | 1691 |
| BbsI | GAAGAC | 3 cut(s) | 11, 1567, 2177 |
| Bbv12I | GWGCWC | 3 cut(s) | 195, 1188, 2650 |
| BbvI | GCAGC | 3 cut(s) | 889, 1288, 2456 |
| BceAI | ACGGC | 3 cut(s) | 213, 487, 664 |
| BciT130I | CCWGG | 7 cut(s) | 76, 753, 1041, 1489, 2241, 2254, 2571 |
| BclI | TGATCA | 1 cut(s) | 691 |
| BcnI | CCSGG | 1 cut(s) | 883 |
| BcoDI | GTCTC | 1 cut(s) | 416 |
| BfaI | CTAG | 2 cut(s) | 723, 1602 |
| BfmI | CTRYAG | 2 cut(s) | 775, 1677 |
| BfrI | CTTAAG | 1 cut(s) | 301 |
| BfuAI | ACCTGC | 2 cut(s) | 998, 1119 |
| BisI | GCNGC | 4 cut(s) | 433, 903, 1302, 2445 |
| BlsI | GCNGC | 4 cut(s) | 434, 904, 1303, 2446 |
| Bme1390I | CCNGG | 8 cut(s) | 76, 753, 883, 1041, 1489, 2241, 2254, 2571 |
| Bme18I | GGWCC | 8 cut(s) | 322, 749, 1037, 1485, 1583, 1776, 2295, 2690 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1839 |
| BmeT110I | CYCGRG | 4 cut(s) | 129, 377, 926, 1586 |
| BmrFI | CCNGG | 8 cut(s) | 76, 753, 883, 1041, 1489, 2241, 2254, 2571 |
| BmrI | ACTGGG | 2 cut(s) | 1857, 2643 |
| BmsI | GCATC | 8 cut(s) | 427, 931, 1009, 1251, 1275, 1396, 1597, 1615 |
| BmuI | ACTGGG | 2 cut(s) | 1857, 2643 |
| BoxI | GACNNNNGTC | 1 cut(s) | 455 |
| BpiI | GAAGAC | 3 cut(s) | 11, 1567, 2177 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2117, 2149 |
| BpmI | CTGGAG | 1 cut(s) | 2292 |
| Bpu10I | CCTNAGC | 2 cut(s) | 711, 1305 |
| Bpu14I | TTCGAA | 1 cut(s) | 386 |
| BpuEI | CTTGAG | 1 cut(s) | 293 |
| BpuMI | CCSGG | 1 cut(s) | 883 |
| Bsa29I | ATCGAT | 2 cut(s) | 659, 984 |
| BsaAI | YACGTR | 1 cut(s) | 514 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2732 |
| BsaJI | CCNNGG | 9 cut(s) | 264, 752, 859, 1040, 1587, 1988, 2240, 2360, 2569 |
| BsaWI | WCCGGW | 2 cut(s) | 1778, 2370 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 259, 684, 746, 825, 2305, 2340 |
| Bse118I | RCCGGY | 2 cut(s) | 440, 2370 |
| Bse1I | ACTGG | 7 cut(s) | 1063, 1084, 1417, 1852, 2102, 2275, 2638 |
| Bse21I | CCTNAGG | 2 cut(s) | 1047, 1808 |
| Bse3DI | GCAATG | 2 cut(s) | 1098, 2161 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2732 |
| BseBI | CCWGG | 7 cut(s) | 76, 753, 1041, 1489, 2241, 2254, 2571 |
| BseCI | ATCGAT | 2 cut(s) | 659, 984 |
| BseDI | CCNNGG | 9 cut(s) | 264, 752, 859, 1040, 1587, 1988, 2240, 2360, 2569 |
| BseJI | GATNNNNATC | 1 cut(s) | 2732 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 259, 684, 746, 825, 2305, 2340 |
| BseMI | GCAATG | 2 cut(s) | 1098, 2161 |
| BseMII | CTCAG | 8 cut(s) | 68, 78, 702, 1785, 1799, 1875, 1893, 2127 |
| BseNI | ACTGG | 7 cut(s) | 1063, 1084, 1417, 1852, 2102, 2275, 2638 |
| BseRI | GAGGAG | 3 cut(s) | 617, 1163, 1295 |
| BseXI | GCAGC | 3 cut(s) | 889, 1288, 2456 |
| BseYI | CCCAGC | 2 cut(s) | 143, 936 |
| Bsh1236I | CGCG | 2 cut(s) | 537, 871 |
| Bsh1285I | CGRYCG | 1 cut(s) | 429 |
| BshNI | GGYRCC | 3 cut(s) | 443, 1931, 2557 |
| BshTI | ACCGGT | 1 cut(s) | 2370 |
| BshVI | ATCGAT | 2 cut(s) | 659, 984 |
| BsiEI | CGRYCG | 1 cut(s) | 429 |
| BsiHKAI | GWGCWC | 3 cut(s) | 195, 1188, 2650 |
| BsiHKCI | CYCGRG | 4 cut(s) | 129, 377, 926, 1586 |
| BsiSI | CCGG | 4 cut(s) | 441, 882, 1779, 2371 |
| BslFI | GGGAC | 2 cut(s) | 889, 1569 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 259, 684, 746, 825, 2305, 2340 |
| BsmAI | GTCTC | 1 cut(s) | 416 |
| BsmBI | CGTCTC | 1 cut(s) | 416 |
| BsmFI | GGGAC | 2 cut(s) | 889, 1569 |
| BsmI | GAATGC | 2 cut(s) | 904, 2600 |
| BsoBI | CYCGRG | 4 cut(s) | 129, 377, 926, 1586 |
| Bsp119I | TTCGAA | 1 cut(s) | 386 |
| Bsp1286I | GDGCHC | 6 cut(s) | 130, 136, 195, 1188, 1692, 2650 |
| Bsp1407I | TGTACA | 1 cut(s) | 1542 |
| BspCNI | CTCAG | 8 cut(s) | 67, 77, 703, 1786, 1800, 1874, 1894, 2128 |
| BspDI | ATCGAT | 2 cut(s) | 659, 984 |
| BspFNI | CGCG | 2 cut(s) | 537, 871 |
| BspHI | TCATGA | 3 cut(s) | 811, 1966, 2169 |
| BspMI | ACCTGC | 2 cut(s) | 998, 1119 |
| BspPI | GGATC | 7 cut(s) | 305, 329, 491, 989, 1328, 1809, 2399 |
| BspQI | GCTCTTC | 1 cut(s) | 212 |
| BspT104I | TTCGAA | 1 cut(s) | 386 |
| BspT107I | GGYRCC | 3 cut(s) | 443, 1931, 2557 |
| BspTI | CTTAAG | 1 cut(s) | 301 |
| BsrDI | GCAATG | 2 cut(s) | 1098, 2161 |
| BsrFI | RCCGGY | 2 cut(s) | 440, 2370 |
| BsrGI | TGTACA | 1 cut(s) | 1542 |
| BsrI | ACTGG | 7 cut(s) | 1063, 1084, 1417, 1852, 2102, 2275, 2638 |
| BssAI | RCCGGY | 2 cut(s) | 440, 2370 |
| BssECI | CCNNGG | 9 cut(s) | 264, 752, 859, 1040, 1587, 1988, 2240, 2360, 2569 |
| BssNAI | GTATAC | 2 cut(s) | 511, 1068 |
| BssSI | CACGAG | 1 cut(s) | 1691 |
| BssT1I | CCWWGG | 1 cut(s) | 264 |
| Bst1107I | GTATAC | 2 cut(s) | 511, 1068 |
| Bst2BI | CACGAG | 1 cut(s) | 1691 |
| Bst2UI | CCWGG | 7 cut(s) | 76, 753, 1041, 1489, 2241, 2254, 2571 |
| Bst4CI | ACNGT | 7 cut(s) | 101, 188, 579, 1101, 1989, 2474, 2628 |
| Bst6I | CTCTTC | 6 cut(s) | 212, 584, 606, 1232, 2313, 2636 |
| BstAFI | CTTAAG | 1 cut(s) | 301 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1745, 2222 |
| BstAUI | TGTACA | 1 cut(s) | 1542 |
| BstBAI | YACGTR | 1 cut(s) | 514 |
| BstBI | TTCGAA | 1 cut(s) | 386 |
| BstC8I | GCNNGC | 5 cut(s) | 136, 653, 717, 2214, 2741 |
| BstDSI | CCRYGG | 2 cut(s) | 859, 1988 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2338 |
| BstFNI | CGCG | 2 cut(s) | 537, 871 |
| BstMAI | GTCTC | 1 cut(s) | 416 |
| BstMCI | CGRYCG | 1 cut(s) | 429 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 144, 346, 403, 1270, 1696, 1745, 2222 |
| BstNI | CCWGG | 7 cut(s) | 76, 753, 1041, 1489, 2241, 2254, 2571 |
| BstNSI | RCATGY | 3 cut(s) | 2050, 2216, 2225 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 455 |
| BstSCI | CCNGG | 8 cut(s) | 74, 751, 881, 1039, 1487, 2239, 2252, 2569 |
| BstSFI | CTRYAG | 2 cut(s) | 775, 1677 |
| BstUI | CGCG | 2 cut(s) | 537, 871 |
| BstV1I | GCAGC | 3 cut(s) | 889, 1288, 2456 |
| BstV2I | GAAGAC | 3 cut(s) | 11, 1567, 2177 |
| BstX2I | RGATCY | 2 cut(s) | 297, 1333 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2345, 2395 |
| BstYI | RGATCY | 2 cut(s) | 297, 1333 |
| BstZ17I | GTATAC | 2 cut(s) | 511, 1068 |
| Bsu15I | ATCGAT | 2 cut(s) | 659, 984 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1047, 1808 |
| BsuTUI | ATCGAT | 2 cut(s) | 659, 984 |
| BtgI | CCRYGG | 2 cut(s) | 859, 1988 |
| BtgZI | GCGATG | 3 cut(s) | 450, 954, 2495 |
| BtsIMutI | CAGTG | 2 cut(s) | 1410, 2631 |
| BveI | ACCTGC | 2 cut(s) | 998, 1119 |
| Cac8I | GCNNGC | 5 cut(s) | 136, 653, 717, 2214, 2741 |
| CaiI | CAGNNNCTG | 4 cut(s) | 99, 950, 1868, 1901 |
| CciI | TCATGA | 3 cut(s) | 811, 1966, 2169 |
| Cfr10I | RCCGGY | 2 cut(s) | 440, 2370 |
| ClaI | ATCGAT | 2 cut(s) | 659, 984 |
| CseI | GACGC | 3 cut(s) | 16, 526, 2587 |
| Csp6I | GTAC | 2 cut(s) | 444, 1543 |
| CspAI | ACCGGT | 1 cut(s) | 2370 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1112, 1147 |
| CviQI | GTAC | 2 cut(s) | 444, 1543 |
| DraI | TTTAAA | 1 cut(s) | 622 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1839 |
| EaeI | YGGCCR | 2 cut(s) | 198, 2572 |
| Eam1104I | CTCTTC | 6 cut(s) | 212, 584, 606, 1232, 2313, 2636 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1839 |
| EarI | CTCTTC | 6 cut(s) | 212, 584, 606, 1232, 2313, 2636 |
| EciI | GGCGGA | 2 cut(s) | 327, 1049 |
| Ecl136II | GAGCTC | 1 cut(s) | 193 |
| Eco130I | CCWWGG | 1 cut(s) | 264 |
| Eco147I | AGGCCT | 1 cut(s) | 263 |
| Eco24I | GRGCYC | 4 cut(s) | 130, 136, 195, 1692 |
| Eco32I | GATATC | 2 cut(s) | 1244, 1854 |
| Eco47I | GGWCC | 8 cut(s) | 322, 749, 1037, 1485, 1583, 1776, 2295, 2690 |
| Eco53kI | GAGCTC | 1 cut(s) | 193 |
| Eco57I | CTGAAG | 3 cut(s) | 2211, 2469, 2574 |
| Eco81I | CCTNAGG | 2 cut(s) | 1047, 1808 |
| Eco88I | CYCGRG | 4 cut(s) | 129, 377, 926, 1586 |
| EcoICRI | GAGCTC | 1 cut(s) | 193 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2338 |
| EcoO109I | RGGNCCY | 7 cut(s) | 322, 642, 749, 1043, 1485, 2295, 2717 |
| EcoRI | GAATTC | 1 cut(s) | 550 |
| EcoRII | CCWGG | 7 cut(s) | 74, 751, 1039, 1487, 2239, 2252, 2569 |
| EcoRV | GATATC | 2 cut(s) | 1244, 1854 |
| EcoT14I | CCWWGG | 1 cut(s) | 264 |
| EcoT38I | GRGCYC | 4 cut(s) | 130, 136, 195, 1692 |
| ErhI | CCWWGG | 1 cut(s) | 264 |
| Esp3I | CGTCTC | 1 cut(s) | 416 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2209, 2241 |
| FaqI | GGGAC | 2 cut(s) | 889, 1569 |
| FauI | CCCGC | 5 cut(s) | 143, 660, 1096, 1278, 1341 |
| FbaI | TGATCA | 1 cut(s) | 691 |
| FblI | GTMKAC | 3 cut(s) | 459, 510, 1067 |
| Fnu4HI | GCNGC | 4 cut(s) | 433, 903, 1302, 2445 |
| FriOI | GRGCYC | 4 cut(s) | 130, 136, 195, 1692 |
| Fsp4HI | GCNGC | 4 cut(s) | 433, 903, 1302, 2445 |
| FspBI | CTAG | 2 cut(s) | 723, 1602 |
| GluI | GCNGC | 4 cut(s) | 433, 903, 1302, 2445 |
| GsaI | CCCAGC | 2 cut(s) | 147, 940 |
| GsuI | CTGGAG | 1 cut(s) | 2292 |
| HapII | CCGG | 4 cut(s) | 441, 882, 1779, 2371 |
| HgaI | GACGC | 3 cut(s) | 16, 526, 2587 |
| HindIII | AAGCTT | 2 cut(s) | 410, 2479 |
| HinfI | GANTC | 9 cut(s) | 255, 706, 764, 815, 947, 1169, 1355, 1834, 2249 |
| HpaII | CCGG | 4 cut(s) | 441, 882, 1779, 2371 |
| HphI | GGTGA | 8 cut(s) | 200, 611, 1112, 1715, 1796, 2410, 2465, 2782 |
| Hpy166II | GTNNAC | 7 cut(s) | 460, 511, 1068, 2438, 2456, 2631, 2693 |
| Hpy188I | TCNGA | 9 cut(s) | 95, 549, 769, 2078, 2137, 2530, 2593, 2670, 2754 |
| Hpy8I | GTNNAC | 7 cut(s) | 460, 511, 1068, 2438, 2456, 2631, 2693 |
| Hpy99I | CGWCG | 3 cut(s) | 320, 421, 2382 |
| HpyCH4III | ACNGT | 7 cut(s) | 101, 188, 579, 1101, 1989, 2474, 2628 |
| HpyCH4IV | ACGT | 4 cut(s) | 171, 513, 2017, 2310 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 144, 346, 403, 1270, 1696, 1745, 2222 |
| HpySE526I | ACGT | 4 cut(s) | 171, 513, 2017, 2310 |
| KpnI | GGTACC | 1 cut(s) | 447 |
| Ksp22I | TGATCA | 1 cut(s) | 691 |
| LguI | GCTCTTC | 1 cut(s) | 212 |
| LmnI | GCTCC | 2 cut(s) | 1766, 2498 |
| Lsp1109I | GCAGC | 3 cut(s) | 889, 1288, 2456 |
| LweI | GCATC | 8 cut(s) | 427, 931, 1009, 1251, 1275, 1396, 1597, 1615 |
| MaeI | CTAG | 2 cut(s) | 723, 1602 |
| MaeII | ACGT | 4 cut(s) | 171, 513, 2017, 2310 |
| MaeIII | GTNAC | 6 cut(s) | 101, 1075, 1321, 1591, 1641, 2042 |
| MflI | RGATCY | 2 cut(s) | 297, 1333 |
| MhlI | GDGCHC | 6 cut(s) | 130, 136, 195, 1188, 1692, 2650 |
| MlsI | TGGCCA | 1 cut(s) | 2574 |
| MluNI | TGGCCA | 1 cut(s) | 2574 |
| MlyI | GAGTC | 4 cut(s) | 758, 956, 1349, 1828 |
| MmeI | TCCRAC | 2 cut(s) | 1015, 2286 |
| Mox20I | TGGCCA | 1 cut(s) | 2574 |
| MroXI | GAANNNNTTC | 1 cut(s) | 350 |
| MscI | TGGCCA | 1 cut(s) | 2574 |
| MseI | TTAA | 8 cut(s) | 302, 621, 786, 1344, 2313, 2430, 2550, 2785 |
| MslI | CAYNNNNRTG | 3 cut(s) | 699, 1230, 2393 |
| Msp20I | TGGCCA | 1 cut(s) | 2574 |
| MspA1I | CMGCKG | 2 cut(s) | 1793, 2447 |
| MspCI | CTTAAG | 1 cut(s) | 301 |
| MspI | CCGG | 4 cut(s) | 441, 882, 1779, 2371 |
| MspR9I | CCNGG | 8 cut(s) | 76, 753, 883, 1041, 1489, 2241, 2254, 2571 |
| Mva1269I | GAATGC | 2 cut(s) | 904, 2600 |
| MvaI | CCWGG | 7 cut(s) | 76, 753, 1041, 1489, 2241, 2254, 2571 |
| MvnI | CGCG | 2 cut(s) | 537, 871 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 144, 346, 403, 1270, 1696, 1745, 2222 |
| NciI | CCSGG | 1 cut(s) | 883 |
| NmuCI | GTSAC | 1 cut(s) | 1075 |
| NspI | RCATGY | 3 cut(s) | 2050, 2216, 2225 |
| NspV | TTCGAA | 1 cut(s) | 386 |
| PaeI | GCATGC | 1 cut(s) | 2216 |
| PagI | TCATGA | 3 cut(s) | 811, 1966, 2169 |
| PaqCI | CACCTGC | 1 cut(s) | 1119 |
| PceI | AGGCCT | 1 cut(s) | 263 |
| PciI | ACATGT | 1 cut(s) | 2046 |
| PciSI | GCTCTTC | 1 cut(s) | 212 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 360, 422, 510 |
| PctI | GAATGC | 2 cut(s) | 904, 2600 |
| PdmI | GAANNNNTTC | 1 cut(s) | 350 |
| PfeI | GAWTC | 5 cut(s) | 255, 706, 815, 1169, 2249 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2305 |
| PfoI | TCCNGGA | 1 cut(s) | 74 |
| PinAI | ACCGGT | 1 cut(s) | 2370 |
| PkrI | GCNGC | 4 cut(s) | 434, 904, 1303, 2446 |
| Ple19I | CGATCG | 1 cut(s) | 429 |
| PleI | GAGTC | 4 cut(s) | 758, 955, 1349, 1828 |
| PpsI | GAGTC | 4 cut(s) | 758, 955, 1349, 1828 |
| Ppu21I | YACGTR | 1 cut(s) | 514 |
| PpuMI | RGGWCCY | 4 cut(s) | 322, 749, 1485, 2295 |
| PscI | ACATGT | 1 cut(s) | 2046 |
| PshAI | GACNNNNGTC | 1 cut(s) | 455 |
| Psp124BI | GAGCTC | 1 cut(s) | 195 |
| Psp5II | RGGWCCY | 4 cut(s) | 322, 749, 1485, 2295 |
| Psp6I | CCWGG | 7 cut(s) | 74, 751, 1039, 1487, 2239, 2252, 2569 |
| PspFI | CCCAGC | 2 cut(s) | 143, 936 |
| PspGI | CCWGG | 7 cut(s) | 74, 751, 1039, 1487, 2239, 2252, 2569 |
| PspPPI | RGGWCCY | 4 cut(s) | 322, 749, 1485, 2295 |
| PstNI | CAGNNNCTG | 4 cut(s) | 99, 950, 1868, 1901 |
| PsuI | RGATCY | 2 cut(s) | 297, 1333 |
| PvuI | CGATCG | 1 cut(s) | 429 |
| PvuII | CAGCTG | 2 cut(s) | 1793, 2447 |
| RsaI | GTAC | 2 cut(s) | 445, 1544 |
| RsaNI | GTAC | 2 cut(s) | 444, 1543 |
| RseI | CAYNNNNRTG | 3 cut(s) | 699, 1230, 2393 |
| SacI | GAGCTC | 1 cut(s) | 195 |
| SapI | GCTCTTC | 1 cut(s) | 212 |
| SaqAI | TTAA | 8 cut(s) | 302, 621, 786, 1344, 2313, 2430, 2550, 2785 |
| SatI | GCNGC | 4 cut(s) | 433, 903, 1302, 2445 |
| SchI | GAGTC | 4 cut(s) | 758, 956, 1349, 1828 |
| ScrFI | CCNGG | 8 cut(s) | 76, 753, 883, 1041, 1489, 2241, 2254, 2571 |
| SduI | GDGCHC | 6 cut(s) | 130, 136, 195, 1188, 1692, 2650 |
| SfaNI | GCATC | 8 cut(s) | 427, 931, 1009, 1251, 1275, 1396, 1597, 1615 |
| SfcI | CTRYAG | 2 cut(s) | 775, 1677 |
| SfuI | TTCGAA | 1 cut(s) | 386 |
| SinI | GGWCC | 8 cut(s) | 322, 749, 1037, 1485, 1583, 1776, 2295, 2690 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 699, 1230, 2393 |
| SmlI | CTYRAG | 2 cut(s) | 301, 308 |
| SmoI | CTYRAG | 2 cut(s) | 301, 308 |
| SphI | GCATGC | 1 cut(s) | 2216 |
| SseBI | AGGCCT | 1 cut(s) | 263 |
| SspMI | CTAG | 2 cut(s) | 723, 1602 |
| SstI | GAGCTC | 1 cut(s) | 195 |
| StuI | AGGCCT | 1 cut(s) | 263 |
| StyD4I | CCNGG | 8 cut(s) | 74, 751, 881, 1039, 1487, 2239, 2252, 2569 |
| StyI | CCWWGG | 1 cut(s) | 264 |
| TaaI | ACNGT | 7 cut(s) | 101, 188, 579, 1101, 1989, 2474, 2628 |
| TaiI | ACGT | 4 cut(s) | 174, 516, 2020, 2313 |
| TaqII | GACCGA | 1 cut(s) | 267 |
| TatI | WGTACW | 1 cut(s) | 1542 |
| TauI | GCSGC | 1 cut(s) | 435 |
| TfiI | GAWTC | 5 cut(s) | 255, 706, 815, 1169, 2249 |
| Tru1I | TTAA | 8 cut(s) | 302, 621, 786, 1344, 2313, 2430, 2550, 2785 |
| Tru9I | TTAA | 8 cut(s) | 302, 621, 786, 1344, 2313, 2430, 2550, 2785 |
| TscAI | CASTG | 2 cut(s) | 1417, 2638 |
| TseFI | GTSAC | 1 cut(s) | 1075 |
| TseI | GCWGC | 3 cut(s) | 902, 1301, 2444 |
| Tsp45I | GTSAC | 1 cut(s) | 1075 |
| TspGWI | ACGGA | 3 cut(s) | 434, 647, 1185 |
| TspRI | CASTG | 2 cut(s) | 1417, 2638 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2305 |
| Vha464I | CTTAAG | 1 cut(s) | 301 |
| VpaK11BI | GGWCC | 8 cut(s) | 322, 749, 1037, 1485, 1583, 1776, 2295, 2690 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2338 |
| XapI | RAATTY | 5 cut(s) | 550, 569, 1502, 2199, 2486 |
| XceI | RCATGY | 3 cut(s) | 2050, 2216, 2225 |
| XmiI | GTMKAC | 3 cut(s) | 459, 510, 1067 |
| XmnI | GAANNNNTTC | 1 cut(s) | 350 |
| XspI | CTAG | 2 cut(s) | 723, 1602 |