Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002632

Physical Location & Seq

Genomic Coordinates Reverse (-)

35763070 .. 35769581

Gene Structure 6512 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ49509

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2706 bp

ATGAAGAAGACCCAGACGATGAACAACCTCACTCTTCTCCTTCTCCTCCTCCTCCTCACCTGTCACCTCTCCCCAGTTCTCTCATGGAAAAAAGACGAGTTCCGAAACTGTAACCAAACCCCATTCTGCAAACGTGCTCGAGCCCGCAACCCTGGCTCGTCCTCCCTCACAGCCCAAGACGCCGCCATCTCCGACGGCGAGCTCACCGCCAAGCTCGTCCCTAAGAGAATCGAACAAGAAGAAACAACCCCCGATCAAATCAAGCCCTTGCTTCTCACTCTCTCTGCTTACCAAGACGGGATCTTGCGCCTCAGGATCGACGAGCTCGATCCGCCCCGCAAGCGCTTCGAGGTCCCCGACGTCGTTTTGCCGGAGTTCGAGAGCAAGAAGCTCTGGCTGCAGAGGCTTTCGACCGAGACGATCGACGGCGACGCGGCTCCGTCGTCGGTCGTGTTCTTATCCGACGGCTACGACGCGGTGCTGCGGCACGATCCGTTCGAGGTTTACGTCCGCGAGAAGAGGGGTAATCGTGTAATTTCCGTGAATTCCAATGGCCTATTTGATTTTGAGCAGCTGAAAGAGAAGAAGGGAGAGGGTGAGGATTGGGAAGAGAGGTTTAGAGGGCACACGGATAAGAGGCCCTACGGCCCTCAGTCCATTAGTTTTGATGTGTCCTTTTATGGGGCTGATCATGTTTACGGGATCCCTGAGCGTGCTTCAAGCTTGGCTTTGAAGCCCACTAGAGGTCCCGGGGTTGAGGAATCTGAACCCTATAGACTGTTTAACTTGGACGTGTTTGAGTATATTCATGATTCCCCATTCGGGCTTTACGGCTCTATTCCATTCATGATTTCCCACGGTAAGGCCCGAGGGACGTCCGGGTTCTTTTGGTTGAATGCTGCTGAAATGCAGATTGATGTTCTTGGAAGCGGGCCGGTATTGTGGATGCTTTTTTTTTTCGTGGGACCGGGACCAAAGGATGTAGCACGTCAGTATGCGAGTGTGACTGGCACGCCCGCAATGCCGCAGCTTTTTGCGGTGGCGTATCACCAATGTAGGTGGAATTATAGAGACGAGGAGGATGTGGAGCAAGTTGATTCTAAGTTTGATGAGCATGATATTCCGTATGATGTTTTGTGGCTTGATATTGAGCACACAGACGGGAAGAGATATTTTACATGGGATAGGATGCTTTTCCCGCACCCGGAGGAGATGCAGAGGAAGTTGGCTGCTAAGGGTAGGCACATGGTTACTATTGTGGACCCTCATATTAAGCGAGATGACTCGTACTTTTTGCACAGGGAGGCCACAGAAAAAGGCTATTATGTTAAGGATGCCAATGGGAATGATTACGATGGGTGGTGCTGGTCTGGTTCGTCATCATATTTGGATATGTTGAGGCCAGAGGTTAGGTCCTGGTGGGCTACAAAGTTCTCTACTGAAAATTATGTTGGTTCAACTCCCTCCTTGTACATCTGGAATGACATGAATGAGCCTTCTGTCTTCAATGGTCCTGAGGTCACAATGCCTAGAGATGCTGTACATCTAGGAGATGTAGAACACCGGGAGTTACATAACGCCTATGGTTACTACTTTCACATGGCTACAGCAGATGGGCTTGTTCAGCGAGGTGATGGAAGGGATAGGCCATTTGTTTTATCGAGAGCAGTATTTGCTGGAAGTCAAAGGCATGGAGCAGTATGGACAGGAGACAATACAGCTGAATGGGATCACCTCAGGGTTTCAGTTCCGATGATTTTGACTCTTGGTCTTACTGGGATATCATTCTCTGGTGCTGATGTGGGTGGGTATTTTGGCAATCCGGAACCTGAGTTGTGGGTTCGTTGGTATCAATTAGGAGCCTACTATCCTTTCTTTAGAGGTCATGCTCACCATGACACCAAAAGACGAGAACCATGGTTATTTGGAGAAAAAAATACTGAACGTATAAGGGAGGCTATACACATCCGTTACATGTTGCTTCCATACTTTTACACATTATTCAGAGAGGCAAACACCAGTGGATTTCCAGTTGCTCGTCCATTGTGGATGGAGTTTCCTTCCGAGGAGGCTACTTTCACAAATGATGAGGCTCTCATGATTGGAAACAGTCTTTTGGTACAAGGGATCTATACAGAGCATGCAAAACATGCTTCTGTTTATTTGCCTGGGAAAGAATCATGGTATGATGTGAAAACTGGAGCAGCTTACAAGGGAGGTAAGACCCATAAGCTGGATGTTAATGAAGAGGGTGTTCCTGCTTTCCAGAGGGCTGGGACTATCATACCAAGGAAAGACCGCTTTCGTCGGAGTTCCACCCAGATGGTGAACGATCCATACACTCTGGTGATAGCACTGAATAGTTCACAGGCAGCTGCAGGTGAACTCTATGTGGATGATGGAAAAAGCTTCGAGTTTCAGCAAGGATCCTATATCCATCGTCGCTTTGTTTTCGCAGATGGGAAGCTTACATCTCTTAATCTGGCACCTGCACAAACCCAATTTTCTTCAGAATGTGTTATTGAGAGGATTATTCTGCAAGGCCTGTCTACGAGGCAAAAGAGTGCGCTAATTGAACCGGCAAATCAAAAGGCTGAGATTGAACAGGGCCCACTTCTCCTTTATTCAAGGCAGGGACCATCAGTGTTAACGGTTCGTAAGCCTAATGTTCGGATAGCAGATGATTGGGTCATAAAAATATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000902 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005975 GO:0005976 GO:0006073 GO:0006464 GO:0006491 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009250 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009653 GO:0009826 GO:0009987 GO:0010035 GO:0010038 GO:0012505 GO:0015926 GO:0016043 GO:0016049 GO:0016051 GO:0016787 GO:0016798 GO:0019538 GO:0030243 GO:0030244 GO:0030587 GO:0031288 GO:0032502 GO:0032989 GO:0033692 GO:0033919 GO:0034637 GO:0034645 GO:0036211 GO:0040007 GO:0042221 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043687 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048589 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0051274 GO:0051703 GO:0051704 GO:0051707 GO:0060560 GO:0071704 GO:0071840 GO:0090599 GO:0090600 GO:0090702 GO:0098542 GO:0099120 GO:1901135 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 ko01100 ko04141 map00510 map01100 map04141

Pfam Domains

Protein Families

DUF5110 Gal_mutarotas_2 Glyco_hydro_31

Protein Analysis

901

Amino Acids

102.9

Weight (kDa)

5.93

Isoelectric Point (pI)

43.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gal_mutarotas_2	PF13802	92 - 306	1.7e-40	Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
Glyco_hydro_31_2nd	PF01055	339 - 667	8.9e-120	Glycosyl hydrolases family 31 TIM-barrel domain
Glyco_hydro_31_3rd	PF21365	675 - 762	3.5e-23	Glycosyl hydrolase family 31 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002632)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63840 AT5G63840
fragaria_vesca	FvH4_1g25070
malus_domestica	MD01G1007800.v1.1 MD01G1007900.v1.1 MD15G1135800.v1.1
prunus_persica	Prupe.4G277800_v2.0.a1 Prupe.4G277800_v2.0.a1
pyrus_communis	pycom15g12240 pycom520g00330
rosa_chinensis	RchiOBHm_Chr2g0122711 RchiOBHm_Chr2g0122721
rosa_laevigata	RLG00000018707 RLG00000018709
rosa_multiflora	Rmu_sc0005370.1_g000002 Rmu_sc0008259.1_g000009 Rmu_sc0008259.1_g000014 Rmu_sc0017734.1_g000006 Rmu_sc0026486.1_g000001
rosa_roxburghii	Rroxscaffold_1G00031190 Rroxscaffold_2G00121270 Rroxscaffold_2G00121280 Rroxscaffold_4G00297410 Rroxscaffold_4G00317480 Rroxscaffold_4G00325980 Rroxscaffold_7G00197700 Rroxscaffold_7G00199130
rosa_rugosa	Rorug02G0241800 Rorug02G0241800 Rorug02G0241900 Rorug02G0242000 Rorug02G0242100
rosa_samantha	Rh2AG300300 Rh2BG308200 Rh2CG286400 Rh2CG286900 Rh2DG324500
rosa_wichuraiana	Rw2G023850 Rw2G023860 Rw2G024040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	2369, 2497
AatII	GACGTC	2 cut(s)	363, 878
Acc36I	ACCTGC	2 cut(s)	2369, 2497
AccB1I	GGYRCC	1 cut(s)	2485
AccB7I	CCANNNNNTGG	1 cut(s)	2233
AccI	GTMKAC	1 cut(s)	2549
AccII	CGCG	3 cut(s)	434, 476, 513
AccIII	TCCGGA	1 cut(s)	1822
AcsI	RAATTY	1 cut(s)	544
AcuI	CTGAAG	1 cut(s)	2493
AcyI	GRCGYC	3 cut(s)	180, 360, 875
AfaI	GTAC	4 cut(s)	1289, 1472, 1542, 2121
AfeI	AGCGCT	1 cut(s)	344
AfiI	CCNNNNNNNGG	6 cut(s)	681, 743, 822, 862, 1204, 2233
AflIII	ACRYGT	2 cut(s)	792, 1974
AgsI	TTSAA	8 cut(s)	720, 733, 895, 1458, 1507, 2576, 2603, 2628
AhdI	GACNNNNNGTC	1 cut(s)	1767
AjiI	CACGTC	2 cut(s)	793, 989
AjnI	CCWGG	3 cut(s)	151, 1415, 2167
AjuI	GAANNNNNNNTTGG	2 cut(s)	1434, 1466
AleI	CACNNNNGTG	1 cut(s)	2345
Alw21I	GWGCWC	4 cut(s)	139, 204, 327, 1155
Alw26I	GTCTC	3 cut(s)	410, 1065, 1704
Ama87I	CYCGRG	3 cut(s)	138, 749, 867
Aor13HI	TCCGGA	1 cut(s)	1822
Aor51HI	AGCGCT	1 cut(s)	344
ApaI	GGGCCC	1 cut(s)	2612
ApeKI	GCWGC	9 cut(s)	397, 481, 571, 899, 1027, 1229, 2204, 2372, 2375
ApoI	RAATTY	1 cut(s)	544
AspLEI	GCGC	3 cut(s)	309, 345, 2569
AsuC2I	CCSGG	6 cut(s)	750, 751, 880, 969, 1205, 1565
AvaI	CYCGRG	3 cut(s)	138, 749, 867
AvaII	GGWCC	8 cut(s)	352, 746, 965, 971, 1261, 1413, 1511, 2636
AxyI	CCTNAGG	3 cut(s)	311, 1515, 1736
BaeGI	GKGCMC	2 cut(s)	627, 2612
BamHI	GGATCC	2 cut(s)	702, 2426
BanI	GGYRCC	1 cut(s)	2485
BanII	GRGCYC	4 cut(s)	145, 204, 327, 2612
BbsI	GAAGAC	2 cut(s)	14, 1495
Bbv12I	GWGCWC	4 cut(s)	139, 204, 327, 1155
BbvI	GCAGC	9 cut(s)	384, 468, 583, 886, 1039, 1216, 2216, 2362, 2384
BceAI	ACGGC	5 cut(s)	211, 442, 481, 661, 847
BcgI	CGANNNNNNTGC	2 cut(s)	328, 362
BciT130I	CCWGG	3 cut(s)	153, 1417, 2169
BclI	TGATCA	1 cut(s)	688
BcnI	CCSGG	6 cut(s)	750, 751, 880, 969, 1205, 1565
BcoDI	GTCTC	3 cut(s)	410, 1065, 1704
BfaI	CTAG	3 cut(s)	741, 1530, 1547
BfmI	CTRYAG	4 cut(s)	398, 772, 1605, 2376
BfoI	RGCGCY	1 cut(s)	346
BfuAI	ACCTGC	2 cut(s)	2369, 2497
Bme1390I	CCNGG	9 cut(s)	153, 750, 751, 880, 969, 1205, 1417, 1565, 2169
Bme18I	GGWCC	8 cut(s)	352, 746, 965, 971, 1261, 1413, 1511, 2636
BmeRI	GACNNNNNGTC	1 cut(s)	1767
BmeT110I	CYCGRG	3 cut(s)	138, 749, 867
BmgBI	CACGTC	2 cut(s)	793, 989
BmrFI	CCNGG	9 cut(s)	153, 750, 751, 880, 969, 1205, 1417, 1565, 2169
BmrI	ACTGGG	2 cut(s)	68, 1785
BmsI	GCATC	5 cut(s)	936, 1179, 1203, 1324, 1525
BmuI	ACTGGG	2 cut(s)	68, 1785
BpiI	GAAGAC	2 cut(s)	14, 1495
BpmI	CTGGAG	1 cut(s)	2220
Bpu10I	CCTNAGC	2 cut(s)	708, 1233
BpuMI	CCSGG	6 cut(s)	750, 751, 880, 969, 1205, 1565
BsaHI	GRCGYC	3 cut(s)	180, 360, 875
BsaJI	CCNNGG	9 cut(s)	151, 749, 750, 856, 868, 1916, 2064, 2168, 2288
BsaWI	WCCGGW	1 cut(s)	1822
Bsc4I	CCNNNNNNNGG	6 cut(s)	681, 743, 822, 862, 1204, 2233
Bse118I	RCCGGY	2 cut(s)	934, 2578
Bse1I	ACTGG	6 cut(s)	74, 1012, 1780, 2019, 2030, 2203
Bse21I	CCTNAGG	3 cut(s)	311, 1515, 1736
Bse3DI	GCAATG	1 cut(s)	1026
BseAI	TCCGGA	1 cut(s)	1822
BseBI	CCWGG	3 cut(s)	153, 1417, 2169
BseDI	CCNNGG	9 cut(s)	151, 749, 750, 856, 868, 1916, 2064, 2168, 2288
BseGI	GGATG	9 cut(s)	951, 985, 1087, 1194, 1339, 1965, 2055, 2242, 2401
BseLI	CCNNNNNNNGG	6 cut(s)	681, 743, 822, 862, 1204, 2233
BseMI	GCAATG	1 cut(s)	1026
BseMII	CTCAG	7 cut(s)	325, 665, 699, 1506, 1750, 1821, 2586
BseNI	ACTGG	6 cut(s)	74, 1012, 1780, 2019, 2030, 2203
BseRI	GAGGAG	7 cut(s)	35, 38, 41, 44, 1091, 1223, 2081
BseSI	GKGCMC	2 cut(s)	627, 2612
BseXI	GCAGC	9 cut(s)	384, 468, 583, 886, 1039, 1216, 2216, 2362, 2384
BseYI	CCCAGC	1 cut(s)	2273
BsgI	GTGCAG	1 cut(s)	2475
Bsh1236I	CGCG	3 cut(s)	434, 476, 513
Bsh1285I	CGRYCG	3 cut(s)	414, 423, 450
BshNI	GGYRCC	1 cut(s)	2485
BsiEI	CGRYCG	3 cut(s)	414, 423, 450
BsiHKAI	GWGCWC	4 cut(s)	139, 204, 327, 1155
BsiHKCI	CYCGRG	3 cut(s)	138, 749, 867
BsiSI	CCGG	9 cut(s)	371, 750, 879, 935, 968, 1205, 1564, 1823, 2579
BslFI	GGGAC	8 cut(s)	203, 338, 732, 886, 978, 984, 2290, 2649
BslI	CCNNNNNNNGG	6 cut(s)	681, 743, 822, 862, 1204, 2233
BsmAI	GTCTC	3 cut(s)	410, 1065, 1704
BsmBI	CGTCTC	2 cut(s)	410, 1065
BsmFI	GGGAC	8 cut(s)	203, 338, 732, 886, 978, 984, 2290, 2649
BsmI	GAATGC	1 cut(s)	901
BsoBI	CYCGRG	3 cut(s)	138, 749, 867
Bsp120I	GGGCCC	1 cut(s)	2608
Bsp1286I	GDGCHC	7 cut(s)	139, 145, 204, 327, 627, 1155, 2612
Bsp13I	TCCGGA	1 cut(s)	1822
Bsp1407I	TGTACA	2 cut(s)	1470, 1540
Bsp19I	CCATGG	1 cut(s)	1916
BspCNI	CTCAG	7 cut(s)	324, 664, 700, 1507, 1749, 1822, 2587
BspEI	TCCGGA	1 cut(s)	1822
BspFNI	CGCG	3 cut(s)	434, 476, 513
BspHI	TCATGA	3 cut(s)	808, 846, 2097
BspMAI	CTGCAG	2 cut(s)	402, 2380
BspMI	ACCTGC	2 cut(s)	2369, 2497
BspT107I	GGYRCC	1 cut(s)	2485
BsrDI	GCAATG	1 cut(s)	1026
BsrFI	RCCGGY	2 cut(s)	934, 2578
BsrGI	TGTACA	2 cut(s)	1470, 1540
BsrI	ACTGG	6 cut(s)	74, 1012, 1780, 2019, 2030, 2203
BssAI	RCCGGY	2 cut(s)	934, 2578
BssECI	CCNNGG	9 cut(s)	151, 749, 750, 856, 868, 1916, 2064, 2168, 2288
BssNI	GRCGYC	3 cut(s)	180, 360, 875
BssT1I	CCWWGG	2 cut(s)	1916, 2288
Bst2UI	CCWGG	3 cut(s)	153, 1417, 2169
Bst4CI	ACNGT	5 cut(s)	110, 780, 860, 2111, 2653
Bst6I	CTCTTC	5 cut(s)	39, 512, 603, 1160, 2241
BstACI	GRCGYC	3 cut(s)	180, 360, 875
BstAPI	GCANNNNNTGC	2 cut(s)	1673, 2150
BstAUI	TGTACA	2 cut(s)	1470, 1540
BstC8I	GCNNGC	8 cut(s)	145, 200, 341, 714, 932, 1013, 1017, 2142
BstDSI	CCRYGG	2 cut(s)	856, 1916
BstF5I	GGATG	9 cut(s)	951, 985, 1087, 1194, 1339, 1965, 2055, 2242, 2401
BstFNI	CGCG	3 cut(s)	434, 476, 513
BstH2I	RGCGCY	1 cut(s)	346
BstHHI	GCGC	3 cut(s)	309, 345, 2569
BstMAI	GTCTC	3 cut(s)	410, 1065, 1704
BstMCI	CGRYCG	3 cut(s)	414, 423, 450
BstNI	CCWGG	3 cut(s)	153, 1417, 2169
BstNSI	RCATGY	3 cut(s)	1978, 2144, 2153
BstSCI	CCNGG	9 cut(s)	151, 748, 749, 878, 967, 1203, 1415, 1563, 2167
BstSFI	CTRYAG	4 cut(s)	398, 772, 1605, 2376
BstSLI	GKGCMC	2 cut(s)	627, 2612
BstUI	CGCG	3 cut(s)	434, 476, 513
BstV1I	GCAGC	9 cut(s)	384, 468, 583, 886, 1039, 1216, 2216, 2362, 2384
BstV2I	GAAGAC	2 cut(s)	14, 1495
BstX2I	RGATCY	4 cut(s)	300, 702, 2127, 2426
BstXI	CCANNNNNNTGG	2 cut(s)	2273, 2323
BstYI	RGATCY	4 cut(s)	300, 702, 2127, 2426
Bsu36I	CCTNAGG	3 cut(s)	311, 1515, 1736
BtgI	CCRYGG	2 cut(s)	856, 1916
BtrI	CACGTC	2 cut(s)	793, 989
BtsCI	GGATG	9 cut(s)	951, 985, 1087, 1194, 1339, 1965, 2055, 2242, 2401
BtsIMutI	CAGTG	3 cut(s)	2026, 2354, 2649
BveI	ACCTGC	2 cut(s)	2369, 2497
Cac8I	GCNNGC	8 cut(s)	145, 200, 341, 714, 932, 1013, 1017, 2142
CciI	TCATGA	3 cut(s)	808, 846, 2097
CfoI	GCGC	3 cut(s)	309, 345, 2569
Cfr10I	RCCGGY	2 cut(s)	934, 2578
Cfr9I	CCCGGG	1 cut(s)	749
CseI	GACGC	3 cut(s)	188, 440, 482
Csp6I	GTAC	4 cut(s)	1288, 1471, 1541, 2120
CspCI	CAANNNNNGTGG	2 cut(s)	1040, 1075
CviQI	GTAC	4 cut(s)	1288, 1471, 1541, 2120
DriI	GACNNNNNGTC	1 cut(s)	1767
Eam1104I	CTCTTC	5 cut(s)	39, 512, 603, 1160, 2241
Eam1105I	GACNNNNNGTC	1 cut(s)	1767
EarI	CTCTTC	5 cut(s)	39, 512, 603, 1160, 2241
EciI	GGCGGA	1 cut(s)	321
Ecl136II	GAGCTC	2 cut(s)	202, 325
Eco130I	CCWWGG	2 cut(s)	1916, 2288
Eco147I	AGGCCT	1 cut(s)	2544
Eco24I	GRGCYC	4 cut(s)	145, 204, 327, 2612
Eco32I	GATATC	1 cut(s)	1782
Eco47I	GGWCC	8 cut(s)	352, 746, 965, 971, 1261, 1413, 1511, 2636
Eco47III	AGCGCT	1 cut(s)	344
Eco53kI	GAGCTC	2 cut(s)	202, 325
Eco57I	CTGAAG	1 cut(s)	2493
Eco81I	CCTNAGG	3 cut(s)	311, 1515, 1736
Eco88I	CYCGRG	3 cut(s)	138, 749, 867
EcoICRI	GAGCTC	2 cut(s)	202, 325
EcoO109I	RGGNCCY	5 cut(s)	352, 639, 746, 1413, 2608
EcoRI	GAATTC	1 cut(s)	544
EcoRII	CCWGG	3 cut(s)	151, 1415, 2167
EcoRV	GATATC	1 cut(s)	1782
EcoT14I	CCWWGG	2 cut(s)	1916, 2288
EcoT38I	GRGCYC	4 cut(s)	145, 204, 327, 2612
ErhI	CCWWGG	2 cut(s)	1916, 2288
Esp3I	CGTCTC	2 cut(s)	410, 1065
FalI	AAGNNNNNCTT	2 cut(s)	712, 744
FaqI	GGGAC	8 cut(s)	203, 338, 732, 886, 978, 984, 2290, 2649
FauI	CCCGC	5 cut(s)	152, 344, 923, 1024, 1206
FbaI	TGATCA	1 cut(s)	688
FblI	GTMKAC	1 cut(s)	2549
FokI	GGATG	9 cut(s)	958, 992, 1094, 1201, 1346, 1952, 2062, 2249, 2408
FriOI	GRGCYC	4 cut(s)	145, 204, 327, 2612
FspBI	CTAG	3 cut(s)	741, 1530, 1547
GlaI	GCGC	3 cut(s)	308, 344, 2568
GsaI	CCCAGC	1 cut(s)	2277
GsuI	CTGGAG	1 cut(s)	2220
HaeII	RGCGCY	1 cut(s)	346
HapII	CCGG	9 cut(s)	371, 750, 879, 935, 968, 1205, 1564, 1823, 2579
HgaI	GACGC	3 cut(s)	188, 440, 482
HhaI	GCGC	3 cut(s)	309, 345, 2569
Hin1I	GRCGYC	3 cut(s)	180, 360, 875
Hin6I	GCGC	3 cut(s)	307, 343, 2567
HinP1I	GCGC	3 cut(s)	307, 343, 2567
HincII	GTYRAC	1 cut(s)	2649
HindII	GTYRAC	1 cut(s)	2649
HindIII	AAGCTT	3 cut(s)	721, 2407, 2465
HinfI	GANTC	7 cut(s)	228, 761, 812, 1097, 1283, 1762, 2177
HpaI	GTTAAC	1 cut(s)	2649
HpaII	CCGG	9 cut(s)	371, 750, 879, 935, 968, 1205, 1564, 1823, 2579
Hpy166II	GTNNAC	8 cut(s)	505, 697, 1261, 2329, 2366, 2384, 2550, 2649
Hpy8I	GTNNAC	8 cut(s)	505, 697, 1261, 2329, 2366, 2384, 2550, 2649
HpyAV	CCTTC	5 cut(s)	50, 580, 1506, 1632, 2070
HpyCH4III	ACNGT	5 cut(s)	110, 780, 860, 2111, 2653
HpyCH4IV	ACGT	7 cut(s)	133, 360, 507, 792, 875, 988, 1945
HpyCH4V	TGCA	9 cut(s)	129, 400, 910, 1216, 1297, 2144, 2378, 2492, 2539
HpySE526I	ACGT	7 cut(s)	133, 360, 507, 792, 875, 988, 1945
Hsp92I	GRCGYC	3 cut(s)	180, 360, 875
HspAI	GCGC	3 cut(s)	307, 343, 2567
Kpn2I	TCCGGA	1 cut(s)	1822
Ksp22I	TGATCA	1 cut(s)	688
KspAI	GTTAAC	1 cut(s)	2649
LmnI	GCTCC	5 cut(s)	442, 1087, 1694, 1859, 2201
Lsp1109I	GCAGC	9 cut(s)	384, 468, 583, 886, 1039, 1216, 2216, 2362, 2384
LweI	GCATC	5 cut(s)	936, 1179, 1203, 1324, 1525
MaeI	CTAG	3 cut(s)	741, 1530, 1547
MaeII	ACGT	7 cut(s)	133, 360, 507, 792, 875, 988, 1945
MaeIII	GTNAC	8 cut(s)	62, 110, 1003, 1249, 1519, 1569, 1586, 1970
MflI	RGATCY	4 cut(s)	300, 702, 2127, 2426
MhlI	GDGCHC	7 cut(s)	139, 145, 204, 327, 627, 1155, 2612
MluCI	AATT	7 cut(s)	534, 544, 1063, 1444, 1853, 2501, 2571
MlyI	GAGTC	2 cut(s)	1277, 1756
MmeI	TCCRAC	3 cut(s)	216, 486, 2288
MroI	TCCGGA	1 cut(s)	1822
MseI	TTAA	6 cut(s)	783, 1272, 1329, 2241, 2478, 2648
MslI	CAYNNNNRTG	2 cut(s)	2321, 2345
MspA1I	CMGCKG	3 cut(s)	574, 1721, 2375
MspI	CCGG	9 cut(s)	371, 750, 879, 935, 968, 1205, 1564, 1823, 2579
MspR9I	CCNGG	9 cut(s)	153, 750, 751, 880, 969, 1205, 1417, 1565, 2169
Mva1269I	GAATGC	1 cut(s)	901
MvaI	CCWGG	3 cut(s)	153, 1417, 2169
MvnI	CGCG	3 cut(s)	434, 476, 513
NciI	CCSGG	6 cut(s)	750, 751, 880, 969, 1205, 1565
NcoI	CCATGG	1 cut(s)	1916
NmuCI	GTSAC	3 cut(s)	62, 1003, 1519
NspI	RCATGY	3 cut(s)	1978, 2144, 2153
OliI	CACNNNNGTG	1 cut(s)	2345
PaeI	GCATGC	1 cut(s)	2144
PaeR7I	CTCGAG	1 cut(s)	138
PagI	TCATGA	3 cut(s)	808, 846, 2097
PaqCI	CACCTGC	2 cut(s)	2369, 2497
PceI	AGGCCT	1 cut(s)	2544
PciI	ACATGT	1 cut(s)	1974
PcsI	WCGNNNNNNNCGW	5 cut(s)	324, 354, 416, 495, 504
PctI	GAATGC	1 cut(s)	901
PfeI	GAWTC	5 cut(s)	228, 761, 812, 1097, 2177
PflMI	CCANNNNNTGG	1 cut(s)	2233
Ple19I	CGATCG	1 cut(s)	423
PleI	GAGTC	2 cut(s)	1277, 1756
PpsI	GAGTC	2 cut(s)	1277, 1756
PpuMI	RGGWCCY	3 cut(s)	352, 746, 1413
PscI	ACATGT	1 cut(s)	1974
Psp124BI	GAGCTC	2 cut(s)	204, 327
Psp5II	RGGWCCY	3 cut(s)	352, 746, 1413
Psp6I	CCWGG	3 cut(s)	151, 1415, 2167
PspFI	CCCAGC	1 cut(s)	2273
PspGI	CCWGG	3 cut(s)	151, 1415, 2167
PspOMI	GGGCCC	1 cut(s)	2608
PspPPI	RGGWCCY	3 cut(s)	352, 746, 1413
PspXI	VCTCGAGB	1 cut(s)	138
PsrI	GAACNNNNNNTAC	2 cut(s)	2321, 2353
PstI	CTGCAG	2 cut(s)	402, 2380
PsuI	RGATCY	4 cut(s)	300, 702, 2127, 2426
PvuI	CGATCG	1 cut(s)	423
PvuII	CAGCTG	3 cut(s)	574, 1721, 2375
RsaI	GTAC	4 cut(s)	1289, 1472, 1542, 2121
RsaNI	GTAC	4 cut(s)	1288, 1471, 1541, 2120
RseI	CAYNNNNRTG	2 cut(s)	2321, 2345
SacI	GAGCTC	2 cut(s)	204, 327
SaqAI	TTAA	6 cut(s)	783, 1272, 1329, 2241, 2478, 2648
SchI	GAGTC	2 cut(s)	1277, 1756
ScrFI	CCNGG	9 cut(s)	153, 750, 751, 880, 969, 1205, 1417, 1565, 2169
SduI	GDGCHC	7 cut(s)	139, 145, 204, 327, 627, 1155, 2612
SfaNI	GCATC	5 cut(s)	936, 1179, 1203, 1324, 1525
SfcI	CTRYAG	4 cut(s)	398, 772, 1605, 2376
Sfr274I	CTCGAG	1 cut(s)	138
SinI	GGWCC	8 cut(s)	352, 746, 965, 971, 1261, 1413, 1511, 2636
SlaI	CTCGAG	1 cut(s)	138
SmaI	CCCGGG	1 cut(s)	751
SmiMI	CAYNNNNRTG	2 cut(s)	2321, 2345
SmlI	CTYRAG	1 cut(s)	138
SmoI	CTYRAG	1 cut(s)	138
SphI	GCATGC	1 cut(s)	2144
Sse9I	AATT	7 cut(s)	534, 544, 1063, 1444, 1853, 2501, 2571
SseBI	AGGCCT	1 cut(s)	2544
SspI	AATATT	1 cut(s)	2700
SspMI	CTAG	3 cut(s)	741, 1530, 1547
SstI	GAGCTC	2 cut(s)	204, 327
StuI	AGGCCT	1 cut(s)	2544
StyD4I	CCNGG	9 cut(s)	151, 748, 749, 878, 967, 1203, 1415, 1563, 2167
StyI	CCWWGG	2 cut(s)	1916, 2288
TaaI	ACNGT	5 cut(s)	110, 780, 860, 2111, 2653
TaiI	ACGT	7 cut(s)	136, 363, 510, 795, 878, 991, 1948
TaqII	GACCGA	2 cut(s)	428, 436
TasI	AATT	7 cut(s)	534, 544, 1063, 1444, 1853, 2501, 2571
TatI	WGTACW	2 cut(s)	1470, 1540
TauI	GCSGC	4 cut(s)	185, 437, 487, 1027
TfiI	GAWTC	5 cut(s)	228, 761, 812, 1097, 2177
Tru1I	TTAA	6 cut(s)	783, 1272, 1329, 2241, 2478, 2648
Tru9I	TTAA	6 cut(s)	783, 1272, 1329, 2241, 2478, 2648
TscAI	CASTG	3 cut(s)	2026, 2361, 2649
TseFI	GTSAC	3 cut(s)	62, 1003, 1519
TseI	GCWGC	9 cut(s)	397, 481, 571, 899, 1027, 1229, 2204, 2372, 2375
Tsp45I	GTSAC	3 cut(s)	62, 1003, 1519
TspDTI	ATGAA	6 cut(s)	17, 35, 797, 835, 1502, 2259
TspGWI	ACGGA	6 cut(s)	429, 483, 529, 644, 1113, 1958
TspMI	CCCGGG	1 cut(s)	749
TspRI	CASTG	3 cut(s)	2026, 2361, 2649
Van91I	CCANNNNNTGG	1 cut(s)	2233
VpaK11BI	GGWCC	8 cut(s)	352, 746, 965, 971, 1261, 1413, 1511, 2636
XapI	RAATTY	1 cut(s)	544
XceI	RCATGY	3 cut(s)	1978, 2144, 2153
XcmI	CCANNNNNNNNNTGG	1 cut(s)	81
XhoI	CTCGAG	1 cut(s)	138
XmaI	CCCGGG	1 cut(s)	749
XmiI	GTMKAC	1 cut(s)	2549
XspI	CTAG	3 cut(s)	741, 1530, 1547
ZraI	GACGTC	2 cut(s)	361, 876

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.