Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008259.1

Orthogroup ID

OG0002632

Physical Location & Seq

Genomic Coordinates Forward (+)

58505 .. 62932

Gene Structure 4428 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008259.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

atgaagaagacccagacgatgaacaacctcactcttctccttctcctcctcctcctcacctgtcacctctcccaagtcctctcatggaaaaaggacgagttccgaaactgtaaccaaaccccattctgcaaacgtgcccgagcccgcaaccctggctcgtcctccctcacagcccaagacgccgccatctccgacggcgagctcaccgccaagctcgtccccaacagaatcgaacaagaagaaaccagccccgatcaaatcaagcccttgcttctcactctctccgcttaccaagacgggatcttgcgcctcaggatcgacgagctcgatccgccccgcaagcgcttcgaggtccccgacgtcgttttgccggagttcgagggcaagaagctctggctgcagaggctttccacggagacgatcgacggcgacgcggctccatcgtcggtcgtgttcttgtccgacggctacgaggcggtgctgcggcacgatccgttcgaggtttacgtccgcgagaagaggggtaatcgtgtaatttccgtgaattccaatggcctatttgattttgagcagctgagagagaagggagagggtgaggattgggaagagaggtttagagggcatacggataagaggccctacggccctcagtccattagttttgatgtgtccttttatggggctgatcatgtttatgggatccctgagcgtgcttcaagctttgctttgaagcccactagaggtcccggggttgaggaatctgaaccctatagactgtttaacttggacgtgtttgagtatattcatgattccccattcgggctttacggctctattccattcatgatttcccacggtaaggcccgagggacgtccgggttcttttggttgaatgctgctgaaatgcagattgatgttcttggaagcgggtgggatgccgaggcaggcattgctctcccttcgtcgcagagtaggattgacacgttttggatgagtgaggccggtattgtggatgctttttttttcgtgggaccgggaccaaaggatgtagcacgtcagtatgcgagtgtgactggcacgcccgcaatgccgcagctttttgcggtggcgtatcaccaatgtaggtggaattatagagacgaggaggatgtggagcaagttgattctaagtttgatgagcatgatattccgtatgatgttctgtggcttgatattgatcacacagacgggaagaggtattttacgtgggataggatgcttttcccacacccggaggagatgcagaggaagttggctgctaagggtaggcacatggttactattgtggaccctcatattaagcgagatgactcgtactttttgcacagggaggccacagaaaaaggctattatgttaaggatgccaatgggaatgattacgatgggtggtgctggcctggttcatcatcatatttggatatgttgaggccagaggttaggtcctggtgggctacaaagttctctactgaaaattatgttggttcaactccttccttgtacatctggaatgacatgaatgagccttctgtcttcaatggtcctgaggttacaatgcctagagatgctgtacatcgaggagatgcagaacaccgggaggtacataacgcctatggttactactttcacatggctacagcagatgggcttgttcagcgaggtgatggaaaggataggccatttgttttatcgagagcagtatttgctggaagtcaaaggcatggagcaatttggacgggagataatacagctgaatgggatcacctcagggtttcagttccgatgattttgactcttggtcttactgggatatcattttctggtgctgatgtgggtgggttttttggcaatccggaacctgagttgttagttcgttggtatcaattaggagcctactatcctttctttagaggtcatgctcatcatgacaccaaaagacgagaaccatggttatttggagaaaaaaacactcaacgtatgagggaggctatacacacccgttacatgttgcttccatacttttacacattattcagagaggcaaacaccagtggtgttccagttgctcgtccattgtggatggagtttccttccgaggaggctactttcacaaatgatgaggctctcatgattggaaacagtcttttggtacaagggatctatacagagcacgcaaaacatacttcagtttatttgcctgggaaagaatcatggtatgatgtgaaaactggagcagcttacaagggaggtaagacccataagctggacgttaacgaagagggtgttcctgctttccagagggctgggactatcataccacggaaagaccggtttcgtcggagttccacccagatggtgaacgatccatacactctggtacgcctttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000902 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005975 GO:0005976 GO:0006073 GO:0006464 GO:0006491 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009250 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009653 GO:0009826 GO:0009987 GO:0010035 GO:0010038 GO:0012505 GO:0015926 GO:0016043 GO:0016049 GO:0016051 GO:0016787 GO:0016798 GO:0019538 GO:0030243 GO:0030244 GO:0030587 GO:0031288 GO:0032502 GO:0032989 GO:0033692 GO:0033919 GO:0034637 GO:0034645 GO:0036211 GO:0040007 GO:0042221 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043687 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048589 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0051274 GO:0051703 GO:0051704 GO:0051707 GO:0060560 GO:0071704 GO:0071840 GO:0090599 GO:0090600 GO:0090702 GO:0098542 GO:0099120 GO:1901135 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 ko01100 ko04141 map00510 map01100 map04141

Pfam Domains

Protein Families

DUF5110 Gal_mutarotas_2 Glyco_hydro_31

Protein Analysis

807

Amino Acids

92.24

Weight (kDa)

5.71

Isoelectric Point (pI)

40.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002632)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63840 AT5G63840
fragaria_vesca	FvH4_1g25070
malus_domestica	MD01G1007800.v1.1 MD01G1007900.v1.1 MD15G1135800.v1.1
prunus_persica	Prupe.4G277800_v2.0.a1 Prupe.4G277800_v2.0.a1
pyrus_communis	pycom15g12240 pycom520g00330
rosa_chinensis	RchiOBHm_Chr2g0122711 RchiOBHm_Chr2g0122721
rosa_laevigata	RLG00000018707 RLG00000018709
rosa_multiflora	Rmu_sc0005370.1_g000002 Rmu_sc0008259.1_g000009 Rmu_sc0008259.1_g000014 Rmu_sc0017734.1_g000006 Rmu_sc0026486.1_g000001
rosa_roxburghii	Rroxscaffold_1G00031190 Rroxscaffold_2G00121270 Rroxscaffold_2G00121280 Rroxscaffold_4G00297410 Rroxscaffold_4G00317480 Rroxscaffold_4G00325980 Rroxscaffold_7G00197700 Rroxscaffold_7G00199130
rosa_rugosa	Rorug02G0241800 Rorug02G0241800 Rorug02G0241900 Rorug02G0242000 Rorug02G0242100
rosa_samantha	Rh2AG300300 Rh2BG308200 Rh2CG286400 Rh2CG286900 Rh2DG324500
rosa_wichuraiana	Rw2G023850 Rw2G023860 Rw2G024040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	363, 875
AccB7I	CCANNNNNTGG	1 cut(s)	2299
AccII	CGCG	2 cut(s)	434, 513
AccIII	TCCGGA	1 cut(s)	1888
AclWI	GGATC	9 cut(s)	308, 323, 323, 485, 694, 707, 1803, 2201, 2393
AcsI	RAATTY	1 cut(s)	544
AcuI	CTGAAG	1 cut(s)	2205
AcyI	GRCGYC	3 cut(s)	180, 360, 872
AfaI	GTAC	6 cut(s)	1355, 1538, 1608, 1638, 2187, 2415
AfeI	AGCGCT	1 cut(s)	344
AfiI	CCNNNNNNNGG	6 cut(s)	678, 740, 819, 859, 1270, 2299
AflIII	ACRYGT	3 cut(s)	789, 981, 2040
AgeI	ACCGGT	1 cut(s)	2364
AgsI	TTSAA	5 cut(s)	717, 730, 892, 1524, 1573
AhdI	GACNNNNNGTC	1 cut(s)	1833
AjiI	CACGTC	2 cut(s)	790, 1055
AjnI	CCWGG	4 cut(s)	151, 1435, 1481, 2233
AjuI	GAANNNNNNNTTGG	2 cut(s)	1500, 1532
Alw21I	GWGCWC	3 cut(s)	204, 327, 2208
Alw26I	GTCTC	2 cut(s)	410, 1131
AlwI	GGATC	9 cut(s)	308, 323, 323, 485, 694, 707, 1803, 2201, 2393
Ama87I	CYCGRG	3 cut(s)	138, 746, 864
Aor13HI	TCCGGA	1 cut(s)	1888
Aor51HI	AGCGCT	1 cut(s)	344
AoxI	GGCC	9 cut(s)	553, 635, 643, 861, 999, 1371, 1433, 1466, 1712
ApeKI	GCWGC	7 cut(s)	397, 481, 571, 896, 1093, 1295, 2270
ApoI	RAATTY	1 cut(s)	544
AsiGI	ACCGGT	1 cut(s)	2364
AspLEI	GCGC	2 cut(s)	309, 345
AsuC2I	CCSGG	6 cut(s)	747, 748, 877, 1035, 1271, 1631
AsuHPI	GGTGA	8 cut(s)	49, 56, 196, 605, 1106, 1709, 1790, 2404
AvaI	CYCGRG	3 cut(s)	138, 746, 864
AvaII	GGWCC	7 cut(s)	352, 743, 1031, 1037, 1327, 1479, 1577
AxyI	CCTNAGG	3 cut(s)	311, 1581, 1802
BaeGI	GKGCMC	1 cut(s)	139
BamHI	GGATCC	1 cut(s)	699
BanII	GRGCYC	3 cut(s)	145, 204, 327
BbsI	GAAGAC	2 cut(s)	14, 1561
Bbv12I	GWGCWC	3 cut(s)	204, 327, 2208
BbvI	GCAGC	7 cut(s)	384, 468, 583, 883, 1105, 1282, 2282
BccI	CCATC	7 cut(s)	194, 448, 1415, 1673, 1694, 2110, 2383
BceAI	ACGGC	5 cut(s)	211, 442, 481, 658, 844
BcgI	CGANNNNNNTGC	2 cut(s)	328, 362
BciT130I	CCWGG	4 cut(s)	153, 1437, 1483, 2235
BclI	TGATCA	2 cut(s)	685, 1216
BcnI	CCSGG	6 cut(s)	747, 748, 877, 1035, 1271, 1631
BcoDI	GTCTC	2 cut(s)	410, 1131
BfaI	CTAG	2 cut(s)	738, 1596
BfmI	CTRYAG	3 cut(s)	398, 769, 1671
BfoI	RGCGCY	1 cut(s)	346
Bme18I	GGWCC	7 cut(s)	352, 743, 1031, 1037, 1327, 1479, 1577
BmeRI	GACNNNNNGTC	1 cut(s)	1833
BmeT110I	CYCGRG	3 cut(s)	138, 746, 864
BmgBI	CACGTC	2 cut(s)	790, 1055
BmiI	GGNNCC	9 cut(s)	354, 438, 701, 745, 1032, 1038, 1329, 1893, 1927
BmrI	ACTGGG	1 cut(s)	1851
BmsI	GCATC	7 cut(s)	925, 1003, 1245, 1269, 1390, 1591, 1609
BmuI	ACTGGG	1 cut(s)	1851
BpiI	GAAGAC	2 cut(s)	14, 1561
BpmI	CTGGAG	1 cut(s)	2286
Bpu10I	CCTNAGC	2 cut(s)	705, 1299
BpuMI	CCSGG	6 cut(s)	747, 748, 877, 1035, 1271, 1631
BsaAI	YACGTR	1 cut(s)	1245
BsaBI	GATNNNNATC	1 cut(s)	1215
BsaHI	GRCGYC	3 cut(s)	180, 360, 872
BsaWI	WCCGGW	2 cut(s)	1888, 2364
Bsc4I	CCNNNNNNNGG	6 cut(s)	678, 740, 819, 859, 1270, 2299
Bse118I	RCCGGY	2 cut(s)	1001, 2364
Bse1I	ACTGG	5 cut(s)	1078, 1846, 2085, 2096, 2269
Bse21I	CCTNAGG	3 cut(s)	311, 1581, 1802
Bse3DI	GCAATG	2 cut(s)	948, 1092
Bse8I	GATNNNNATC	1 cut(s)	1215
BseAI	TCCGGA	1 cut(s)	1888
BseBI	CCWGG	4 cut(s)	153, 1437, 1483, 2235
BseGI	GGATG	8 cut(s)	940, 996, 1018, 1051, 1153, 1260, 1405, 2121
BseJI	GATNNNNATC	1 cut(s)	1215
BseLI	CCNNNNNNNGG	6 cut(s)	678, 740, 819, 859, 1270, 2299
BseMI	GCAATG	2 cut(s)	948, 1092
BseMII	CTCAG	7 cut(s)	325, 566, 662, 696, 1572, 1816, 1887
BseNI	ACTGG	5 cut(s)	1078, 1846, 2085, 2096, 2269
BseRI	GAGGAG	8 cut(s)	35, 38, 41, 44, 1157, 1289, 1629, 2147
BseSI	GKGCMC	1 cut(s)	139
BseXI	GCAGC	7 cut(s)	384, 468, 583, 883, 1105, 1282, 2282
BseYI	CCCAGC	1 cut(s)	2339
Bsh1236I	CGCG	2 cut(s)	434, 513
Bsh1285I	CGRYCG	2 cut(s)	423, 450
BshFI	GGCC	9 cut(s)	555, 637, 645, 863, 1001, 1373, 1435, 1468, 1714
BshTI	ACCGGT	1 cut(s)	2364
BsiEI	CGRYCG	2 cut(s)	423, 450
BsiHKAI	GWGCWC	3 cut(s)	204, 327, 2208
BsiHKCI	CYCGRG	3 cut(s)	138, 746, 864
BsiSI	CCGG	9 cut(s)	371, 747, 876, 1002, 1034, 1271, 1630, 1889, 2365
BslFI	GGGAC	7 cut(s)	203, 338, 729, 883, 1044, 1050, 2356
BslI	CCNNNNNNNGG	6 cut(s)	678, 740, 819, 859, 1270, 2299
BsmAI	GTCTC	2 cut(s)	410, 1131
BsmBI	CGTCTC	2 cut(s)	410, 1131
BsmFI	GGGAC	7 cut(s)	203, 338, 729, 883, 1044, 1050, 2356
BsmI	GAATGC	1 cut(s)	898
BsnI	GGCC	9 cut(s)	555, 637, 645, 863, 1001, 1373, 1435, 1468, 1714
BsoBI	CYCGRG	3 cut(s)	138, 746, 864
Bsp1286I	GDGCHC	5 cut(s)	139, 145, 204, 327, 2208
Bsp13I	TCCGGA	1 cut(s)	1888
Bsp1407I	TGTACA	2 cut(s)	1536, 1606
Bsp19I	CCATGG	1 cut(s)	1982
BspANI	GGCC	9 cut(s)	555, 637, 645, 863, 1001, 1373, 1435, 1468, 1714
BspCNI	CTCAG	7 cut(s)	324, 567, 661, 697, 1573, 1815, 1888
BspEI	TCCGGA	1 cut(s)	1888
BspFNI	CGCG	2 cut(s)	434, 513
BspHI	TCATGA	4 cut(s)	805, 843, 1960, 2163
BspLI	GGNNCC	9 cut(s)	354, 438, 701, 745, 1032, 1038, 1329, 1893, 1927
BspMAI	CTGCAG	1 cut(s)	402
BspPI	GGATC	9 cut(s)	308, 323, 323, 485, 694, 707, 1803, 2201, 2393
BsrDI	GCAATG	2 cut(s)	948, 1092
BsrFI	RCCGGY	2 cut(s)	1001, 2364
BsrGI	TGTACA	2 cut(s)	1536, 1606
BsrI	ACTGG	5 cut(s)	1078, 1846, 2085, 2096, 2269
BssAI	RCCGGY	2 cut(s)	1001, 2364
BssNI	GRCGYC	3 cut(s)	180, 360, 872
BssT1I	CCWWGG	1 cut(s)	1982
Bst2UI	CCWGG	4 cut(s)	153, 1437, 1483, 2235
Bst4CI	ACNGT	4 cut(s)	110, 777, 857, 2177
Bst6I	CTCTTC	5 cut(s)	39, 512, 600, 1226, 2307
BstACI	GRCGYC	3 cut(s)	180, 360, 872
BstAPI	GCANNNNNTGC	2 cut(s)	950, 1739
BstAUI	TGTACA	2 cut(s)	1536, 1606
BstBAI	YACGTR	1 cut(s)	1245
BstC8I	GCNNGC	9 cut(s)	145, 200, 341, 711, 946, 1079, 1083, 1433, 2208
BstDEI	CTNAG	9 cut(s)	311, 575, 648, 705, 1167, 1299, 1581, 1802, 1896
BstDSI	CCRYGG	4 cut(s)	411, 853, 1982, 2354
BstF5I	GGATG	8 cut(s)	940, 996, 1018, 1051, 1153, 1260, 1405, 2121
BstFNI	CGCG	2 cut(s)	434, 513
BstH2I	RGCGCY	1 cut(s)	346
BstHHI	GCGC	2 cut(s)	309, 345
BstMAI	GTCTC	2 cut(s)	410, 1131
BstMCI	CGRYCG	2 cut(s)	423, 450
BstNI	CCWGG	4 cut(s)	153, 1437, 1483, 2235
BstNSI	RCATGY	1 cut(s)	2044
BstSFI	CTRYAG	3 cut(s)	398, 769, 1671
BstSLI	GKGCMC	1 cut(s)	139
BstUI	CGCG	2 cut(s)	434, 513
BstV1I	GCAGC	7 cut(s)	384, 468, 583, 883, 1105, 1282, 2282
BstV2I	GAAGAC	2 cut(s)	14, 1561
BstX2I	RGATCY	3 cut(s)	300, 699, 2193
BstXI	CCANNNNNNTGG	2 cut(s)	2339, 2389
BstYI	RGATCY	3 cut(s)	300, 699, 2193
Bsu36I	CCTNAGG	3 cut(s)	311, 1581, 1802
BsuRI	GGCC	9 cut(s)	555, 637, 645, 863, 1001, 1373, 1435, 1468, 1714
BtgI	CCRYGG	4 cut(s)	411, 853, 1982, 2354
BtrI	CACGTC	2 cut(s)	790, 1055
BtsCI	GGATG	8 cut(s)	940, 996, 1018, 1051, 1153, 1260, 1405, 2121
BtsIMutI	CAGTG	1 cut(s)	2092
Cac8I	GCNNGC	9 cut(s)	145, 200, 341, 711, 946, 1079, 1083, 1433, 2208
CciI	TCATGA	4 cut(s)	805, 843, 1960, 2163
CfoI	GCGC	2 cut(s)	309, 345
Cfr10I	RCCGGY	2 cut(s)	1001, 2364
Cfr9I	CCCGGG	1 cut(s)	746
CseI	GACGC	2 cut(s)	188, 440
Csp6I	GTAC	6 cut(s)	1354, 1537, 1607, 1637, 2186, 2414
CspAI	ACCGGT	1 cut(s)	2364
CspCI	CAANNNNNGTGG	2 cut(s)	1106, 1141
CviQI	GTAC	6 cut(s)	1354, 1537, 1607, 1637, 2186, 2414
DdeI	CTNAG	9 cut(s)	311, 575, 648, 705, 1167, 1299, 1581, 1802, 1896
DriI	GACNNNNNGTC	1 cut(s)	1833
Eam1104I	CTCTTC	5 cut(s)	39, 512, 600, 1226, 2307
Eam1105I	GACNNNNNGTC	1 cut(s)	1833
EarI	CTCTTC	5 cut(s)	39, 512, 600, 1226, 2307
EciI	GGCGGA	1 cut(s)	321
Ecl136II	GAGCTC	2 cut(s)	202, 325
Eco130I	CCWWGG	1 cut(s)	1982
Eco24I	GRGCYC	3 cut(s)	145, 204, 327
Eco32I	GATATC	1 cut(s)	1848
Eco47I	GGWCC	7 cut(s)	352, 743, 1031, 1037, 1327, 1479, 1577
Eco47III	AGCGCT	1 cut(s)	344
Eco53kI	GAGCTC	2 cut(s)	202, 325
Eco57I	CTGAAG	1 cut(s)	2205
Eco81I	CCTNAGG	3 cut(s)	311, 1581, 1802
Eco88I	CYCGRG	3 cut(s)	138, 746, 864
EcoICRI	GAGCTC	2 cut(s)	202, 325
EcoO109I	RGGNCCY	4 cut(s)	352, 636, 743, 1479
EcoRI	GAATTC	1 cut(s)	544
EcoRII	CCWGG	4 cut(s)	151, 1435, 1481, 2233
EcoRV	GATATC	1 cut(s)	1848
EcoT14I	CCWWGG	1 cut(s)	1982
EcoT38I	GRGCYC	3 cut(s)	145, 204, 327
ErhI	CCWWGG	1 cut(s)	1982
Esp3I	CGTCTC	2 cut(s)	410, 1131
FalI	AAGNNNNNCTT	2 cut(s)	709, 741
FaqI	GGGAC	7 cut(s)	203, 338, 729, 883, 1044, 1050, 2356
FauI	CCCGC	4 cut(s)	152, 344, 920, 1090
FbaI	TGATCA	2 cut(s)	685, 1216
FokI	GGATG	8 cut(s)	947, 1003, 1025, 1058, 1160, 1267, 1412, 2128
FriOI	GRGCYC	3 cut(s)	145, 204, 327
FspBI	CTAG	2 cut(s)	738, 1596
GlaI	GCGC	2 cut(s)	308, 344
GsaI	CCCAGC	1 cut(s)	2343
GsuI	CTGGAG	1 cut(s)	2286
HaeII	RGCGCY	1 cut(s)	346
HaeIII	GGCC	9 cut(s)	555, 637, 645, 863, 1001, 1373, 1435, 1468, 1714
HapII	CCGG	9 cut(s)	371, 747, 876, 1002, 1034, 1271, 1630, 1889, 2365
HgaI	GACGC	2 cut(s)	188, 440
HhaI	GCGC	2 cut(s)	309, 345
Hin1I	GRCGYC	3 cut(s)	180, 360, 872
Hin6I	GCGC	2 cut(s)	307, 343
HinP1I	GCGC	2 cut(s)	307, 343
HincII	GTYRAC	1 cut(s)	2308
HindII	GTYRAC	1 cut(s)	2308
HindIII	AAGCTT	1 cut(s)	718
HinfI	GANTC	7 cut(s)	228, 758, 809, 1163, 1349, 1828, 2243
HpaI	GTTAAC	1 cut(s)	2308
HpaII	CCGG	9 cut(s)	371, 747, 876, 1002, 1034, 1271, 1630, 1889, 2365
HphI	GGTGA	8 cut(s)	49, 56, 196, 605, 1106, 1709, 1790, 2404
Hpy166II	GTNNAC	4 cut(s)	505, 1327, 2308, 2395
Hpy188I	TCNGA	8 cut(s)	104, 193, 463, 763, 1818, 2072, 2131, 2376
Hpy8I	GTNNAC	4 cut(s)	505, 1327, 2308, 2395
HpyAV	CCTTC	6 cut(s)	50, 577, 969, 1539, 1572, 2136
HpyCH4III	ACNGT	4 cut(s)	110, 777, 857, 2177
HpyCH4V	TGCA	6 cut(s)	129, 400, 907, 1282, 1363, 1622
HpyF3I	CTNAG	9 cut(s)	311, 575, 648, 705, 1167, 1299, 1581, 1802, 1896
Hsp92I	GRCGYC	3 cut(s)	180, 360, 872
HspAI	GCGC	2 cut(s)	307, 343
Kpn2I	TCCGGA	1 cut(s)	1888
Ksp22I	TGATCA	2 cut(s)	685, 1216
KspAI	GTTAAC	1 cut(s)	2308
LmnI	GCTCC	5 cut(s)	442, 1153, 1760, 1925, 2267
Lsp1109I	GCAGC	7 cut(s)	384, 468, 583, 883, 1105, 1282, 2282
LweI	GCATC	7 cut(s)	925, 1003, 1245, 1269, 1390, 1591, 1609
MaeI	CTAG	2 cut(s)	738, 1596
MaeIII	GTNAC	7 cut(s)	62, 110, 1069, 1315, 1585, 1652, 2036
MboII	GAAGA	9 cut(s)	16, 19, 26, 251, 529, 617, 1243, 1561, 2324
MflI	RGATCY	3 cut(s)	300, 699, 2193
MhlI	GDGCHC	5 cut(s)	139, 145, 204, 327, 2208
MluCI	AATT	6 cut(s)	534, 544, 1129, 1510, 1764, 1919
MlyI	GAGTC	2 cut(s)	1343, 1822
MmeI	TCCRAC	3 cut(s)	216, 486, 2354
MroI	TCCGGA	1 cut(s)	1888
MseI	TTAA	4 cut(s)	780, 1338, 1395, 2307
MslI	CAYNNNNRTG	2 cut(s)	693, 2387
MspA1I	CMGCKG	2 cut(s)	574, 1787
MspI	CCGG	9 cut(s)	371, 747, 876, 1002, 1034, 1271, 1630, 1889, 2365
Mva1269I	GAATGC	1 cut(s)	898
MvaI	CCWGG	4 cut(s)	153, 1437, 1483, 2235
MvnI	CGCG	2 cut(s)	434, 513
NciI	CCSGG	6 cut(s)	747, 748, 877, 1035, 1271, 1631
NcoI	CCATGG	1 cut(s)	1982
NlaIV	GGNNCC	9 cut(s)	354, 438, 701, 745, 1032, 1038, 1329, 1893, 1927
NmeAIII	GCCGAG	1 cut(s)	964
NmuCI	GTSAC	2 cut(s)	62, 1069
NspI	RCATGY	1 cut(s)	2044
PagI	TCATGA	4 cut(s)	805, 843, 1960, 2163
PciI	ACATGT	1 cut(s)	2040
PcsI	WCGNNNNNNNCGW	4 cut(s)	324, 354, 495, 504
PctI	GAATGC	1 cut(s)	898
PfeI	GAWTC	5 cut(s)	228, 758, 809, 1163, 2243
PflMI	CCANNNNNTGG	1 cut(s)	2299
PinAI	ACCGGT	1 cut(s)	2364
Ple19I	CGATCG	1 cut(s)	423
PleI	GAGTC	2 cut(s)	1343, 1822
PpsI	GAGTC	2 cut(s)	1343, 1822
Ppu21I	YACGTR	1 cut(s)	1245
PpuMI	RGGWCCY	3 cut(s)	352, 743, 1479
PscI	ACATGT	1 cut(s)	2040
Psp124BI	GAGCTC	2 cut(s)	204, 327
Psp5II	RGGWCCY	3 cut(s)	352, 743, 1479
Psp6I	CCWGG	4 cut(s)	151, 1435, 1481, 2233
PspFI	CCCAGC	1 cut(s)	2339
PspGI	CCWGG	4 cut(s)	151, 1435, 1481, 2233
PspN4I	GGNNCC	9 cut(s)	354, 438, 701, 745, 1032, 1038, 1329, 1893, 1927
PspPPI	RGGWCCY	3 cut(s)	352, 743, 1479
PsrI	GAACNNNNNNTAC	2 cut(s)	2387, 2419
PstI	CTGCAG	1 cut(s)	402
PsuI	RGATCY	3 cut(s)	300, 699, 2193
PvuI	CGATCG	1 cut(s)	423
PvuII	CAGCTG	2 cut(s)	574, 1787
RsaI	GTAC	6 cut(s)	1355, 1538, 1608, 1638, 2187, 2415
RsaNI	GTAC	6 cut(s)	1354, 1537, 1607, 1637, 2186, 2414
RseI	CAYNNNNRTG	2 cut(s)	693, 2387
SacI	GAGCTC	2 cut(s)	204, 327
SaqAI	TTAA	4 cut(s)	780, 1338, 1395, 2307
SchI	GAGTC	2 cut(s)	1343, 1822
SduI	GDGCHC	5 cut(s)	139, 145, 204, 327, 2208
SfaNI	GCATC	7 cut(s)	925, 1003, 1245, 1269, 1390, 1591, 1609
SfcI	CTRYAG	3 cut(s)	398, 769, 1671
SinI	GGWCC	7 cut(s)	352, 743, 1031, 1037, 1327, 1479, 1577
SmaI	CCCGGG	1 cut(s)	748
SmiMI	CAYNNNNRTG	2 cut(s)	693, 2387
Sse9I	AATT	6 cut(s)	534, 544, 1129, 1510, 1764, 1919
SspMI	CTAG	2 cut(s)	738, 1596
SstI	GAGCTC	2 cut(s)	204, 327
StyI	CCWWGG	1 cut(s)	1982
TaaI	ACNGT	4 cut(s)	110, 777, 857, 2177
TaqI	TCGA	9 cut(s)	231, 318, 327, 348, 378, 423, 498, 1612, 1727
TaqII	GACCGA	1 cut(s)	436
TasI	AATT	6 cut(s)	534, 544, 1129, 1510, 1764, 1919
TatI	WGTACW	2 cut(s)	1536, 1606
TauI	GCSGC	4 cut(s)	185, 437, 487, 1093
TfiI	GAWTC	5 cut(s)	228, 758, 809, 1163, 2243
Tru1I	TTAA	4 cut(s)	780, 1338, 1395, 2307
Tru9I	TTAA	4 cut(s)	780, 1338, 1395, 2307
TscAI	CASTG	1 cut(s)	2092
TseFI	GTSAC	2 cut(s)	62, 1069
TseI	GCWGC	7 cut(s)	397, 481, 571, 896, 1093, 1295, 2270
Tsp45I	GTSAC	2 cut(s)	62, 1069
TspDTI	ATGAA	6 cut(s)	17, 35, 794, 832, 1431, 1568
TspGWI	ACGGA	6 cut(s)	428, 483, 529, 641, 1179, 2371
TspMI	CCCGGG	1 cut(s)	746
TspRI	CASTG	1 cut(s)	2092
Van91I	CCANNNNNTGG	1 cut(s)	2299
VpaK11BI	GGWCC	7 cut(s)	352, 743, 1031, 1037, 1327, 1479, 1577
XapI	RAATTY	1 cut(s)	544
XceI	RCATGY	1 cut(s)	2044
XmaI	CCCGGG	1 cut(s)	746
XspI	CTAG	2 cut(s)	738, 1596
ZraI	GACGTC	2 cut(s)	361, 873

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.