Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002632

Physical Location & Seq

Genomic Coordinates Forward (+)

24827231 .. 24830308

Gene Structure 3078 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0241800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGGCTGCTTCAGTTCCACTGAGTGGTGAGACCCAACTCATTCAGAGTCTGTTTGCAATTGTAGTCAAGGGTCATTGGAACCACCTCTTGAAACCCAAGCTTGGGTCTTGTCTCACCTCATCCACCATTCACCAGGTACTCCTGCAACTCTCACTCTATGGCTACAGCCCTTCACTTTCCTTGTCTTTCTTCAAATGGGTGGAGTCAGTACCCAATTACAAGCACTCCTTGCAGTGCTCTTGGACCATGGTTCACATTCTCACTAAGCACAGACACTTCAAAACTGCACACCAATTACTTGAGAAGATTGCTTTTAGGGATTTCTTGTCATCCCCAACTGTTTTGAATGCTTTGATTCCGACCCAAGATGACCCGGATGTGAATTCCCATGTTTTGAGCTGGCTTGTGATAACTTATGCTAATTCTAAGATGACCCAGGATGCGATTCAGGTTTTGGAGCATATGAGGGTACATGGGTTTAAGCCCCATTTGCATGCTTGTACTGTGTTGTTGAATTGCTTGGTTAAAGAGAGGTTGACTAGTATGGTTTGGAAAGTTTATAAGAAGATGATTCGGACCGGAGTTGTTCCGAATATTCATACATACAATGTGTTGATTCATGCTTGTTGCAAGTCTGGGGATATAGAAAAGGCGGAAGGATTGGTGAGTGAGATGGAGTTGAGGTGTGTGTTTCCTGATCTTTTCACCTATAATACTTTGATATCATTGTATTCCAAAAGAGGTATGCACTATGAAGCTTTGTCTGTTCAAAATAGAATGGAAATGACAGGAGTTAGTCCTGACATGGTGACATACAATTCTCTTATGTATGGATTTTGTAGAGAACGAAGGATGACAGAAGCTGTAAAACTTTTCCGGGACATCAAGGGTTGTGTTCCTAATCATATAACTTACACTACATTGATTGATGGGTATTGTAGAGTGAATGACCTGGAAGAAGCTTTAAGATTGTGTGAGGTTATGAAGTCTAAGGGGTTGTATCCTGGAGTTGTTACTTATAATTCTATTCTTCGCAAGTTGTGTCAAGAAGGCAGGATGAGGGATGCGAATAAGCTTTTGAATGAGATGAGTGAAAAGAATGTTGAGCCTGACAATGTCACATGTAACACCCTGATTAATGCTTATTGCAAAATCAGAGATATGATGTCTGCAGTGAAAGTGAAGAACAGGATGTTGGCATCTGGGTTGAAGCTGGATGAATTTACATATAAAGCACTCATTCATGGATTTTGTATGGTACCGGAAATGGACGGTGCTAAAGATCTTTTATTTAGCATGCTTGATGCGGGGTTTTGCCCAAGTTATTGCACATATACATGGATTATAGATGCTTACTGCAACCAAGGCAATCAAGAAGCAGTTATAAGATTACCAGATGAGTTTGTTAGAAAAGGTATTGTTGTTGATGTCTCTCTGTACAGGGCTTTAATAAGGAGGTTATGTAAACGAGAAAGGCTAGATTGTGCTGAAAAGGTTTACAGTCTAATGCAAGAGAAGGGTATATTAGCAGACAGTGTAGTATTTACTAGTCTAGCATATGCTTACTTGAAAGCAGGAAAATCAAGTGTAGTTTCAGGGATGTTAGATGAAATGTTCAAGAGGAGGTTGATGGTAACACGCAAGATCTACAGGTCTTTCAATGCATCATATGCCAGTGAAAATGACATCTTACGTCTCTTTTGGGAGCATATGGTCGAGAGAGGCCTGATGTCAAAAACTGTTATGATTACGGAAATGCAGCAAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000902 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005975 GO:0005976 GO:0006073 GO:0006464 GO:0006491 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009250 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009653 GO:0009826 GO:0009987 GO:0010035 GO:0010038 GO:0012505 GO:0015926 GO:0016043 GO:0016049 GO:0016051 GO:0016787 GO:0016798 GO:0019538 GO:0030243 GO:0030244 GO:0030587 GO:0031288 GO:0032502 GO:0032989 GO:0033692 GO:0033919 GO:0034637 GO:0034645 GO:0036211 GO:0040007 GO:0042221 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043687 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048589 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0051274 GO:0051703 GO:0051704 GO:0051707 GO:0060560 GO:0071704 GO:0071840 GO:0090599 GO:0090600 GO:0090702 GO:0098542 GO:0099120 GO:1901135 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 ko01100 ko04141 map00510 map01100 map04141

Pfam Domains

Protein Families

DUF5110 Gal_mutarotas_2 Glyco_hydro_31

Protein Analysis

589

Amino Acids

67.45

Weight (kDa)

8.87

Isoelectric Point (pI)

34.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	128 - 221	1.3e-07	Fungal tetratrico peptide repeats
PPR_long	PF17177	145 - 276	1.1e-12	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	151 - 210	3.5e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	164 - 211	1.2e-12	PPR repeat family
PPR_1	PF12854	194 - 226	1.3e-10	PPR repeat
PPR_2	PF13041	200 - 242	1.5e-12	PPR repeat family
PPR	PF01535	201 - 228	5.8e-08	PPR repeat
PPR_3	PF13812	221 - 276	2.9e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	232 - 281	3.7e-14	PPR repeat family
PPR_1	PF12854	264 - 294	1.5e-10	PPR repeat
PPR_2	PF13041	267 - 314	3.3e-16	PPR repeat family
PPR	PF01535	270 - 297	2e-06	PPR repeat
TPR_24	PF23276	287 - 394	5.7e-12	Fungal tetratrico peptide repeats
PPR_3	PF13812	295 - 345	3.7e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	296 - 329	7.2e-14	PPR repeat
PPR_2	PF13041	300 - 348	2.5e-15	PPR repeat family
PPR	PF01535	303 - 333	1.6e-08	PPR repeat
PPR_long	PF17177	318 - 414	1.5e-09	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	331 - 364	7.6e-10	PPR repeat
PPR_2	PF13041	335 - 384	1.6e-18	PPR repeat family
PPR	PF01535	338 - 368	1.6e-06	PPR repeat
PPR_1	PF12854	366 - 398	8.4e-07	PPR repeat
PPR_2	PF13041	370 - 418	1.5e-14	PPR repeat family
PPR_2	PF13041	440 - 489	1.8e-06	PPR repeat family
PPR_2	PF13041	476 - 521	8.9e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0002632)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63840 AT5G63840
fragaria_vesca	FvH4_1g25070
malus_domestica	MD01G1007800.v1.1 MD01G1007900.v1.1 MD15G1135800.v1.1
prunus_persica	Prupe.4G277800_v2.0.a1 Prupe.4G277800_v2.0.a1
pyrus_communis	pycom15g12240 pycom520g00330
rosa_chinensis	RchiOBHm_Chr2g0122711 RchiOBHm_Chr2g0122721
rosa_laevigata	RLG00000018707 RLG00000018709
rosa_multiflora	Rmu_sc0005370.1_g000002 Rmu_sc0008259.1_g000009 Rmu_sc0008259.1_g000014 Rmu_sc0017734.1_g000006 Rmu_sc0026486.1_g000001
rosa_roxburghii	Rroxscaffold_1G00031190 Rroxscaffold_2G00121270 Rroxscaffold_2G00121280 Rroxscaffold_4G00297410 Rroxscaffold_4G00317480 Rroxscaffold_4G00325980 Rroxscaffold_7G00197700 Rroxscaffold_7G00199130
rosa_rugosa	Rorug02G0241800 Rorug02G0241800 Rorug02G0241900 Rorug02G0242000 Rorug02G0242100
rosa_samantha	Rh2AG300300 Rh2BG308200 Rh2CG286400 Rh2CG286900 Rh2DG324500
rosa_wichuraiana	Rw2G023850 Rw2G023860 Rw2G024040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	561, 1020, 1385
Acc65I	GGTACC	1 cut(s)	1258
AccB1I	GGYRCC	1 cut(s)	1258
AccB7I	CCANNNNNTGG	1 cut(s)	23
AciI	CCGC	2 cut(s)	653, 1307
AcsI	RAATTY	2 cut(s)	382, 1220
AdeI	CACNNNGTG	1 cut(s)	23
AfaI	GTAC	6 cut(s)	138, 210, 471, 502, 1260, 1439
AfiI	CCNNNNNNNGG	3 cut(s)	23, 101, 102
AflIII	ACRYGT	1 cut(s)	1121
AhlI	ACTAGT	2 cut(s)	539, 1547
AjnI	CCWGG	4 cut(s)	132, 435, 951, 1003
AjuI	GAANNNNNNNTTGG	2 cut(s)	1178, 1210
AluBI	AGCT	7 cut(s)	100, 399, 758, 863, 962, 1075, 1213
AluI	AGCT	7 cut(s)	100, 399, 758, 863, 962, 1075, 1213
Alw21I	GWGCWC	1 cut(s)	239
Alw26I	GTCTC	4 cut(s)	23, 116, 1435, 1700
AlwNI	CAGNNNCTG	2 cut(s)	49, 863
AoxI	GGCC	1 cut(s)	1723
ApeKI	GCWGC	2 cut(s)	5, 1759
ApoI	RAATTY	2 cut(s)	382, 1220
AseI	ATTAAT	1 cut(s)	1137
Asp718I	GGTACC	1 cut(s)	1258
AspS9I	GGNCC	2 cut(s)	243, 576
AsuC2I	CCSGG	2 cut(s)	374, 878
AsuHPI	GGTGA	6 cut(s)	38, 106, 122, 676, 697, 820
AvaII	GGWCC	2 cut(s)	243, 576
BaeI	ACNNNNGTAYC	2 cut(s)	461, 494
BanI	GGYRCC	1 cut(s)	1258
Bbv12I	GWGCWC	1 cut(s)	239
BccI	CCATC	3 cut(s)	667, 923, 1624
BciT130I	CCWGG	4 cut(s)	134, 437, 953, 1005
BciVI	GTATCC	1 cut(s)	1011
BcnI	CCSGG	2 cut(s)	374, 878
BcoDI	GTCTC	4 cut(s)	23, 116, 1435, 1700
BcuI	ACTAGT	2 cut(s)	539, 1547
BfaI	CTAG	4 cut(s)	540, 1478, 1548, 1553
BfmI	CTRYAG	3 cut(s)	163, 1170, 1648
BfuI	GTATCC	1 cut(s)	1011
BglII	AGATCT	2 cut(s)	1282, 1644
BisI	GCNGC	2 cut(s)	6, 1760
BlsI	GCNGC	2 cut(s)	7, 1761
Bme1390I	CCNGG	6 cut(s)	134, 374, 437, 878, 953, 1005
Bme18I	GGWCC	2 cut(s)	243, 576
BmgT120I	GGNCC	2 cut(s)	243, 576
BmiI	GGNNCC	2 cut(s)	80, 1260
BmrFI	CCNGG	6 cut(s)	134, 374, 437, 878, 953, 1005
BmsI	GCATC	6 cut(s)	430, 1054, 1208, 1294, 1339, 1673
BpmI	CTGGAG	1 cut(s)	1026
BpuEI	CTTGAG	1 cut(s)	320
BpuMI	CCSGG	2 cut(s)	374, 878
BsaI	GGTCTC	1 cut(s)	23
BsaJI	CCNNGG	3 cut(s)	246, 435, 1363
BsaWI	WCCGGW	2 cut(s)	578, 1261
BsaXI	ACNNNNNCTCC	6 cut(s)	209, 239, 668, 698, 1447, 1477
Bsc4I	CCNNNNNNNGG	3 cut(s)	23, 101, 102
Bse1I	ACTGG	1 cut(s)	1674
BseBI	CCWGG	4 cut(s)	134, 437, 953, 1005
BseDI	CCNNGG	3 cut(s)	246, 435, 1363
BseLI	CCNNNNNNNGG	3 cut(s)	23, 101, 102
BseMII	CTCAG	1 cut(s)	11
BseNI	ACTGG	1 cut(s)	1674
BseRI	GAGGAG	1 cut(s)	1636
BsgI	GTGCAG	1 cut(s)	270
BshFI	GGCC	1 cut(s)	1725
BshNI	GGYRCC	1 cut(s)	1258
BsiHKAI	GWGCWC	1 cut(s)	239
BsiSI	CCGG	4 cut(s)	374, 579, 877, 1262
BslFI	GGGAC	1 cut(s)	893
BslI	CCNNNNNNNGG	3 cut(s)	23, 101, 102
BsmAI	GTCTC	4 cut(s)	23, 116, 1435, 1700
BsmBI	CGTCTC	1 cut(s)	1700
BsmFI	GGGAC	1 cut(s)	893
BsmI	GAATGC	1 cut(s)	352
BsnI	GGCC	1 cut(s)	1725
Bso31I	GGTCTC	1 cut(s)	23
Bsp1286I	GDGCHC	1 cut(s)	239
Bsp1407I	TGTACA	1 cut(s)	1437
Bsp143I	GATC	3 cut(s)	697, 1282, 1644
Bsp19I	CCATGG	1 cut(s)	246
BspACI	CCGC	2 cut(s)	653, 1307
BspANI	GGCC	1 cut(s)	1725
BspCNI	CTCAG	1 cut(s)	12
BspLI	GGNNCC	2 cut(s)	80, 1260
BspMAI	CTGCAG	1 cut(s)	1174
BspT107I	GGYRCC	1 cut(s)	1258
BspTNI	GGTCTC	1 cut(s)	23
BsrGI	TGTACA	1 cut(s)	1437
BsrI	ACTGG	1 cut(s)	1674
BssECI	CCNNGG	3 cut(s)	246, 435, 1363
BssMI	GATC	3 cut(s)	697, 1282, 1644
BssT1I	CCWWGG	2 cut(s)	246, 1363
Bst2UI	CCWGG	4 cut(s)	134, 437, 953, 1005
Bst4CI	ACNGT	6 cut(s)	340, 505, 1274, 1502, 1535, 1741
BstAPI	GCANNNNNTGC	2 cut(s)	229, 1670
BstAUI	TGTACA	1 cut(s)	1437
BstC8I	GCNNGC	3 cut(s)	401, 495, 1298
BstDEI	CTNAG	4 cut(s)	20, 264, 426, 990
BstDSI	CCRYGG	1 cut(s)	246
BstKTI	GATC	3 cut(s)	700, 1285, 1647
BstMAI	GTCTC	4 cut(s)	23, 116, 1435, 1700
BstMBI	GATC	3 cut(s)	697, 1282, 1644
BstMWI	GCNNNNNNNGC	4 cut(s)	229, 490, 1365, 1670
BstNI	CCWGG	4 cut(s)	134, 437, 953, 1005
BstNSI	RCATGY	3 cut(s)	497, 1125, 1300
BstSCI	CCNGG	6 cut(s)	132, 372, 435, 876, 951, 1003
BstSFI	CTRYAG	3 cut(s)	163, 1170, 1648
BstX2I	RGATCY	2 cut(s)	1282, 1644
BstYI	RGATCY	2 cut(s)	1282, 1644
BsuI	GTATCC	1 cut(s)	1011
BsuRI	GGCC	1 cut(s)	1725
BtgI	CCRYGG	1 cut(s)	246
BtsI	GCAGTG	2 cut(s)	239, 1179
BtsIMutI	CAGTG	5 cut(s)	17, 239, 1179, 1540, 1681
Cac8I	GCNNGC	3 cut(s)	401, 495, 1298
CaiI	CAGNNNCTG	2 cut(s)	49, 863
Cfr13I	GGNCC	2 cut(s)	243, 576
CpoI	CGGWCCG	1 cut(s)	576
CsiI	ACCWGGT	1 cut(s)	132
Csp6I	GTAC	6 cut(s)	137, 209, 470, 501, 1259, 1438
CspI	CGGWCCG	1 cut(s)	576
CviQI	GTAC	6 cut(s)	137, 209, 470, 501, 1259, 1438
DdeI	CTNAG	4 cut(s)	20, 264, 426, 990
DpnI	GATC	3 cut(s)	699, 1284, 1646
DpnII	GATC	3 cut(s)	697, 1282, 1644
DraIII	CACNNNGTG	1 cut(s)	23
EciI	GGCGGA	1 cut(s)	668
Eco130I	CCWWGG	2 cut(s)	246, 1363
Eco147I	AGGCCT	1 cut(s)	1725
Eco31I	GGTCTC	1 cut(s)	23
Eco32I	GATATC	1 cut(s)	723
Eco47I	GGWCC	2 cut(s)	243, 576
EcoRI	GAATTC	1 cut(s)	382
EcoRII	CCWGG	4 cut(s)	132, 435, 951, 1003
EcoRV	GATATC	1 cut(s)	723
EcoT14I	CCWWGG	2 cut(s)	246, 1363
EcoT22I	ATGCAT	1 cut(s)	1666
ErhI	CCWWGG	2 cut(s)	246, 1363
Esp3I	CGTCTC	1 cut(s)	1700
FalI	AAGNNNNNCTT	2 cut(s)	212, 244
FaqI	GGGAC	1 cut(s)	893
FauI	CCCGC	1 cut(s)	1300
FauNDI	CATATG	4 cut(s)	462, 1558, 1669, 1710
Fnu4HI	GCNGC	2 cut(s)	6, 1760
Fsp4HI	GCNGC	2 cut(s)	6, 1760
FspBI	CTAG	4 cut(s)	540, 1478, 1548, 1553
GluI	GCNGC	2 cut(s)	6, 1760
GsuI	CTGGAG	1 cut(s)	1026
HaeIII	GGCC	1 cut(s)	1725
HapII	CCGG	4 cut(s)	374, 579, 877, 1262
HincII	GTYRAC	1 cut(s)	537
HindII	GTYRAC	1 cut(s)	537
HindIII	AAGCTT	4 cut(s)	98, 756, 960, 1073
HinfI	GANTC	6 cut(s)	46, 203, 355, 445, 571, 616
HpaII	CCGG	4 cut(s)	374, 579, 877, 1262
HphI	GGTGA	6 cut(s)	38, 106, 122, 676, 697, 820
Hpy166II	GTNNAC	4 cut(s)	253, 537, 1466, 1498
Hpy188I	TCNGA	5 cut(s)	45, 360, 576, 591, 1157
Hpy188III	TCNNGA	7 cut(s)	88, 695, 800, 1046, 1373, 1618, 1717
Hpy8I	GTNNAC	4 cut(s)	253, 537, 1466, 1498
HpyAV	CCTTC	5 cut(s)	180, 650, 843, 1043, 1510
HpyCH4III	ACNGT	6 cut(s)	340, 505, 1274, 1502, 1535, 1741
HpyCH4IV	ACGT	1 cut(s)	1693
HpyF10VI	GCNNNNNNNGC	4 cut(s)	229, 490, 1365, 1670
HpyF3I	CTNAG	4 cut(s)	20, 264, 426, 990
HpySE526I	ACGT	1 cut(s)	1693
KpnI	GGTACC	1 cut(s)	1262
Kzo9I	GATC	3 cut(s)	697, 1282, 1644
LmnI	GCTCC	2 cut(s)	457, 1705
LweI	GCATC	6 cut(s)	430, 1054, 1208, 1294, 1339, 1673
MabI	ACCWGGT	1 cut(s)	132
MaeI	CTAG	4 cut(s)	540, 1478, 1548, 1553
MaeII	ACGT	1 cut(s)	1693
MaeIII	GTNAC	5 cut(s)	808, 1012, 1117, 1124, 1633
MalI	GATC	3 cut(s)	699, 1284, 1646
MboI	GATC	3 cut(s)	697, 1282, 1644
MboII	GAAGA	6 cut(s)	181, 316, 577, 968, 1022, 1195
MfeI	CAATTG	1 cut(s)	57
MflI	RGATCY	2 cut(s)	1282, 1644
MhlI	GDGCHC	1 cut(s)	239
MluCI	AATT	9 cut(s)	57, 214, 293, 382, 421, 514, 817, 1021, 1220
MlyI	GAGTC	2 cut(s)	55, 212
MmeI	TCCRAC	1 cut(s)	383
Mph1103I	ATGCAT	1 cut(s)	1666
MseI	TTAA	5 cut(s)	480, 525, 965, 1137, 1448
MslI	CAYNNNNRTG	2 cut(s)	492, 1336
MspI	CCGG	4 cut(s)	374, 579, 877, 1262
MspR9I	CCNGG	6 cut(s)	134, 374, 437, 878, 953, 1005
MunI	CAATTG	1 cut(s)	57
Mva1269I	GAATGC	1 cut(s)	352
MvaI	CCWGG	4 cut(s)	134, 437, 953, 1005
MwoI	GCNNNNNNNGC	4 cut(s)	229, 490, 1365, 1670
NciI	CCSGG	2 cut(s)	374, 878
NcoI	CCATGG	1 cut(s)	246
NdeI	CATATG	4 cut(s)	462, 1558, 1669, 1710
NdeII	GATC	3 cut(s)	697, 1282, 1644
NlaIV	GGNNCC	2 cut(s)	80, 1260
NmuCI	GTSAC	2 cut(s)	808, 1117
NsiI	ATGCAT	1 cut(s)	1666
NspI	RCATGY	3 cut(s)	497, 1125, 1300
PaeI	GCATGC	2 cut(s)	497, 1300
PceI	AGGCCT	1 cut(s)	1725
PciI	ACATGT	1 cut(s)	1121
PctI	GAATGC	1 cut(s)	352
PfeI	GAWTC	4 cut(s)	355, 445, 571, 616
PflFI	GACNNNGTC	1 cut(s)	1115
PflMI	CCANNNNNTGG	1 cut(s)	23
PfoI	TCCNGGA	2 cut(s)	876, 1003
PkrI	GCNGC	2 cut(s)	7, 1761
PleI	GAGTC	2 cut(s)	54, 211
PpsI	GAGTC	2 cut(s)	54, 211
PscI	ACATGT	1 cut(s)	1121
PshBI	ATTAAT	1 cut(s)	1137
PsiI	TTATAA	3 cut(s)	561, 1020, 1385
Psp6I	CCWGG	4 cut(s)	132, 435, 951, 1003
PspGI	CCWGG	4 cut(s)	132, 435, 951, 1003
PspN4I	GGNNCC	2 cut(s)	80, 1260
PspPI	GGNCC	2 cut(s)	243, 576
PstI	CTGCAG	1 cut(s)	1174
PstNI	CAGNNNCTG	2 cut(s)	49, 863
PsuI	RGATCY	2 cut(s)	1282, 1644
PsyI	GACNNNGTC	1 cut(s)	1115
RsaI	GTAC	6 cut(s)	138, 210, 471, 502, 1260, 1439
RsaNI	GTAC	6 cut(s)	137, 209, 470, 501, 1259, 1438
RseI	CAYNNNNRTG	2 cut(s)	492, 1336
Rsr2I	CGGWCCG	1 cut(s)	576
RsrII	CGGWCCG	1 cut(s)	576
SaqAI	TTAA	5 cut(s)	480, 525, 965, 1137, 1448
SatI	GCNGC	2 cut(s)	6, 1760
Sau3AI	GATC	3 cut(s)	697, 1282, 1644
Sau96I	GGNCC	2 cut(s)	243, 576
SchI	GAGTC	2 cut(s)	55, 212
ScrFI	CCNGG	6 cut(s)	134, 374, 437, 878, 953, 1005
SduI	GDGCHC	1 cut(s)	239
SexAI	ACCWGGT	1 cut(s)	132
SfaNI	GCATC	6 cut(s)	430, 1054, 1208, 1294, 1339, 1673
SfcI	CTRYAG	3 cut(s)	163, 1170, 1648
SinI	GGWCC	2 cut(s)	243, 576
SmiMI	CAYNNNNRTG	2 cut(s)	492, 1336
SmlI	CTYRAG	1 cut(s)	299
SmoI	CTYRAG	1 cut(s)	299
SpeI	ACTAGT	2 cut(s)	539, 1547
SphI	GCATGC	2 cut(s)	497, 1300
Sse9I	AATT	9 cut(s)	57, 214, 293, 382, 421, 514, 817, 1021, 1220
SseBI	AGGCCT	1 cut(s)	1725
SsiI	CCGC	2 cut(s)	653, 1307
SspI	AATATT	1 cut(s)	595
SspMI	CTAG	4 cut(s)	540, 1478, 1548, 1553
StuI	AGGCCT	1 cut(s)	1725
StyD4I	CCNGG	6 cut(s)	132, 372, 435, 876, 951, 1003
StyI	CCWWGG	2 cut(s)	246, 1363
TaaI	ACNGT	6 cut(s)	340, 505, 1274, 1502, 1535, 1741
TaiI	ACGT	1 cut(s)	1696
TaqI	TCGA	1 cut(s)	1716
TasI	AATT	9 cut(s)	57, 214, 293, 382, 421, 514, 817, 1021, 1220
TatI	WGTACW	2 cut(s)	500, 1437
TfiI	GAWTC	4 cut(s)	355, 445, 571, 616
Tru1I	TTAA	5 cut(s)	480, 525, 965, 1137, 1448
Tru9I	TTAA	5 cut(s)	480, 525, 965, 1137, 1448
TscAI	CASTG	5 cut(s)	24, 239, 1179, 1540, 1681
TseFI	GTSAC	2 cut(s)	808, 1117
TseI	GCWGC	2 cut(s)	5, 1759
Tsp45I	GTSAC	2 cut(s)	808, 1117
TspDTI	ATGAA	7 cut(s)	587, 608, 768, 998, 1232, 1233, 1623
TspGWI	ACGGA	1 cut(s)	1766
TspRI	CASTG	5 cut(s)	24, 239, 1179, 1540, 1681
Tth111I	GACNNNGTC	1 cut(s)	1115
Van91I	CCANNNNNTGG	1 cut(s)	23
VpaK11BI	GGWCC	2 cut(s)	243, 576
VspI	ATTAAT	1 cut(s)	1137
XapI	RAATTY	2 cut(s)	382, 1220
XceI	RCATGY	3 cut(s)	497, 1125, 1300
XspI	CTAG	4 cut(s)	540, 1478, 1548, 1553
Zsp2I	ATGCAT	1 cut(s)	1666

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.