Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002632

Physical Location & Seq

Genomic Coordinates Forward (+)

53822445 .. 53828794

Gene Structure 6350 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00121280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2769 bp

ATGAAGAAGACCCAGACGATGAACAACCTCACTCTTCTCCTTCTCCTCCTTCTCACCTGTCACCTGTCCCCAGTTCTCTCATGGAAAAAAGACGAGTTCCGGAACTGTAACCAAACCCCATTCTGCAAACGCGCCCGAGCTCGCAACCCCGGCTCGTCCTCCCTCACAGTCCAAGACGCCGCCATCTCCGACGGCGAGCTCACCGCCAAGCTCGTCCCCAAGAGAATCGAACAAGAAGAAACAACCCCCGATCAAATCAAGCCCTTGCTTCTCACTCTCTCCGCTTACCAAGACGGGATCTTGCGCCTCAGGATCGACGAGCTCGATCCGCCCCGCAAGCGCTTCGAGGTCCCCGACGTCGTTTTGCCGGAGTTCGAGAGCAAGAAGCTCTGGCTGCAGAGGCTTTCCACGGAGACGATCGACGGCGACGCGGCTCCGTCGTCGGTCGTGTTCTTATCCGACGGCTACGAGGCGGTGCTGCGGCACGATCCGTTCGAGGTTTACGTCCGCGAGAAGAGGGGTAACCGTGTAATTTCCGTGAATTCCAATGGCTTATTTGATTTTGAGCAGCTGAGAGAGAAGGGAGAGGGTGAGGATTGGGAAGAGAGGTTTAGAGGGCACACGGATAGGAGGCCCTACGGCCCTCAGTCCATTAGTTTTGATGTGTCCTTTTATGGGGCTGATCATGTTTATGGGATCCCTGAGCGTGCTTCAAGCTTTGCTTTGAAGCCCACTAGAGGTCCCGGGGTTGAGGAATCTGAACCCTATAGACTGTTTAACTTGGACGTGTTTGAGTATATTCATGATTCCCCGTTCGGGCTTTACGGCTCGATTCCATTCATGATTTCCCACGGCAAGGCCCGAGGGACTTCCGGGTTCTTTTGGTTGAATGCTGCTGAAATGCAGATTGATGTTCTTGGGAACGGGTGGGATGCCGAGGCCGGCATTGCTCTCCCTTCGTCGCAGAGTAGGATTGACACGTTTTGGATGAGTGAGGCCGGTATTGTGGATGCTTTCTTTTTCGTGGGACCGGGGCCAAAGGATGTAGCGCGTCAGTATGCAAGTGTGACTGGCACGCCCGCAATGCCGCAGCTGTTTGCGGTGGCGTATCACCAATGTAGGTGGAATTATAGAGATGAGGAGGACGTGGAGCAAGTTGATTCTAAGTTTGATGAGCATGATATTCCGTATGATGTTTTGTGGCTTGATATTGAGCACACAGACGGGAAGAGGTATTTTACATGGGATAGGATGCTTTTCCCGCACCCGGAGGAGATGCAGAGGAAGTTGGCTGCTAAGGGTAGGCACATGGTTACTATTGTGGACCCTCATATTAAGCGAGATGACTCGTACTTTTTGCACAGGGAGGCCACAGAAAAAGGCTATTATGTTAAGGATGCCAATGGGAATGATTACGATGGGTGGTGCTGGCCTGGTTCATCATCATATTTGGATATGTTGAGGCCAGAGGTTAGGTCCTGGTGGGCTACAAAGTTCTCTACTGAAAATTATGTTGGTTCAACTCCCTCCTTGTACATCTGGAATGACATGAATGAGCCTTCTGTCTTCAATGGTCCTGAGGTTACAATGCCTAGAGATGCTGTACATCGAGGAGATGCAGAACACCGGGAGGTACATAACGCCTATGGTTACTACTTTCACATGGCTACAGCAGATGGGCTTGTTCAGCGAGGTGATGGAAAGGACAGGCCATTTGTTTTATCGAGAGCAGTATTTGCTGGAAGTCAAAGGCATGGAGCAATATGGACGGGAGATAATACAGCTGAATGGGATCACCTCAGGGTTTCAGTTCCGATGATTTTGACTCTTGGTCTTACTGGGATATCATTTTCTGGTGCTGATGTGGGTGGGTTTTTTGGCAATCCGGAACCTGAGTTGTTAGTTCGTTGGTATCAATTAGGAGCCTACTATCCTTTCTTTAGAGGTCATGCTCATCATGACACCAAAAGACGAGAACCATGGTTATTTGGAGAAAAAAACACTCAACGTATGAGGGAGGCTATACACACCCGTTACATGTTGCTTCCATACTTTTACACATTATTCAGAGAGGCAAACACCAGTGGTGTTCCAGTTGCTCGTGCATTGTGGATGGAGTTTCCTTCCGAGGAGGCTACTTTCACAAATGATGAGGCTCTCATGATTGGAAACAGTCTTTTGGTACAAGGGATCTATACAGAGCACGCAAAACATACTTCAGTTTATTTGCCTGGGAAAGAATCATGGTATGATGTGAAAACTGGAGCAGCTTACAAGGGAGGTAAGACCCATAAGCTGGACGTTAACGAAGAGGGTGTTCCTGCTTTCCAGAGGGCTGGGACTATCATACCACGGAAAGACCGATTTCGTCGGAGTTCCACCCAGATGGTGAACGATCCATACACTCTGGTGATAGCACTGAATAGTTCACAAGCCGCTGAAGGTGAACTCTATGTGGATGATGGAAAAAGCTTCGAGTTTCGGCAAGGATCCTATATCCATCGGCGCTTTGTTTTCGCAGATGGGAAGCTTACATCTCTTAATCTGGCACCTGGACAAACCCAATTTTCTTCAGAATGTGTTATTGAGAGGATTATTCTGCAAGGACTGTCTACTGGGCAAAAGAGTGCGCTAATTGAACCGGCAAATCAAAAGACTGAGATTGAACAGGGCCCACTTCTCCTTCATTCAAGGCAAGGACCAACAGTGTTAACGATTCGTAAGCCTAATGTTCGAATAGCAGATGATTGGGTCATAAAAATATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000902 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005975 GO:0005976 GO:0006073 GO:0006464 GO:0006491 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009250 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009653 GO:0009826 GO:0009987 GO:0010035 GO:0010038 GO:0012505 GO:0015926 GO:0016043 GO:0016049 GO:0016051 GO:0016787 GO:0016798 GO:0019538 GO:0030243 GO:0030244 GO:0030587 GO:0031288 GO:0032502 GO:0032989 GO:0033692 GO:0033919 GO:0034637 GO:0034645 GO:0036211 GO:0040007 GO:0042221 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043687 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048589 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0051274 GO:0051703 GO:0051704 GO:0051707 GO:0060560 GO:0071704 GO:0071840 GO:0090599 GO:0090600 GO:0090702 GO:0098542 GO:0099120 GO:1901135 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 ko01100 ko04141 map00510 map01100 map04141

Pfam Domains

Protein Families

DUF5110 Gal_mutarotas_2 Glyco_hydro_31

Protein Analysis

922

Amino Acids

105.05

Weight (kDa)

5.78

Isoelectric Point (pI)

41.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gal_mutarotas_2	PF13802	91 - 304	1e-40	Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
Glyco_hydro_31_2nd	PF01055	360 - 688	3.4e-122	Glycosyl hydrolases family 31 TIM-barrel domain
Glyco_hydro_31_3rd	PF21365	696 - 783	8.7e-23	Glycosyl hydrolase family 31 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002632)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63840 AT5G63840
fragaria_vesca	FvH4_1g25070
malus_domestica	MD01G1007800.v1.1 MD01G1007900.v1.1 MD15G1135800.v1.1
prunus_persica	Prupe.4G277800_v2.0.a1 Prupe.4G277800_v2.0.a1
pyrus_communis	pycom15g12240 pycom520g00330
rosa_chinensis	RchiOBHm_Chr2g0122711 RchiOBHm_Chr2g0122721
rosa_laevigata	RLG00000018707 RLG00000018709
rosa_multiflora	Rmu_sc0005370.1_g000002 Rmu_sc0008259.1_g000009 Rmu_sc0008259.1_g000014 Rmu_sc0017734.1_g000006 Rmu_sc0026486.1_g000001
rosa_roxburghii	Rroxscaffold_1G00031190 Rroxscaffold_2G00121270 Rroxscaffold_2G00121280 Rroxscaffold_4G00297410 Rroxscaffold_4G00317480 Rroxscaffold_4G00325980 Rroxscaffold_7G00197700 Rroxscaffold_7G00199130
rosa_rugosa	Rorug02G0241800 Rorug02G0241800 Rorug02G0241900 Rorug02G0242000 Rorug02G0242100
rosa_samantha	Rh2AG300300 Rh2BG308200 Rh2CG286400 Rh2CG286900 Rh2DG324500
rosa_wichuraiana	Rw2G023850 Rw2G023860 Rw2G024040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	360
AccB1I	GGYRCC	1 cut(s)	2548
AccB7I	CCANNNNNTGG	1 cut(s)	2296
AccI	GTMKAC	1 cut(s)	2612
AccII	CGCG	4 cut(s)	132, 431, 510, 1051
AccIII	TCCGGA	2 cut(s)	99, 1885
AcsI	RAATTY	1 cut(s)	541
AcuI	CTGAAG	3 cut(s)	2202, 2460, 2556
AcyI	GRCGYC	2 cut(s)	177, 357
AfaI	GTAC	5 cut(s)	1352, 1535, 1605, 1635, 2184
AfeI	AGCGCT	1 cut(s)	341
AfiI	CCNNNNNNNGG	6 cut(s)	675, 737, 816, 856, 1267, 2296
AflIII	ACRYGT	3 cut(s)	786, 978, 2037
AgsI	TTSAA	8 cut(s)	714, 727, 889, 1521, 1570, 2639, 2666, 2691
AhdI	GACNNNNNGTC	1 cut(s)	1830
AjiI	CACGTC	2 cut(s)	787, 1147
AjnI	CCWGG	4 cut(s)	1432, 1478, 2230, 2551
AjuI	GAANNNNNNNTTGG	2 cut(s)	1497, 1529
AleI	CACNNNNGTG	1 cut(s)	2408
Alw21I	GWGCWC	5 cut(s)	142, 201, 324, 1218, 2205
Alw26I	GTCTC	1 cut(s)	407
Ama87I	CYCGRG	3 cut(s)	135, 743, 861
Aor13HI	TCCGGA	2 cut(s)	99, 1885
Aor51HI	AGCGCT	1 cut(s)	341
ApaI	GGGCCC	1 cut(s)	2675
ApeKI	GCWGC	7 cut(s)	394, 478, 568, 893, 1090, 1292, 2267
ApoI	RAATTY	1 cut(s)	541
ArsI	GACNNNNNNTTYG	2 cut(s)	1697, 1729
AspLEI	GCGC	6 cut(s)	134, 306, 342, 1051, 2508, 2632
AsuC2I	CCSGG	7 cut(s)	150, 744, 745, 874, 1032, 1268, 1628
AsuII	TTCGAA	1 cut(s)	2734
AvaI	CYCGRG	3 cut(s)	135, 743, 861
AvaII	GGWCC	7 cut(s)	349, 740, 1028, 1324, 1476, 1574, 2699
AxyI	CCTNAGG	3 cut(s)	308, 1578, 1799
BaeGI	GKGCMC	2 cut(s)	621, 2675
BamHI	GGATCC	2 cut(s)	696, 2489
BanI	GGYRCC	1 cut(s)	2548
BanII	GRGCYC	4 cut(s)	142, 201, 324, 2675
BauI	CACGAG	1 cut(s)	2100
BbsI	GAAGAC	2 cut(s)	14, 1558
Bbv12I	GWGCWC	5 cut(s)	142, 201, 324, 1218, 2205
BbvI	GCAGC	7 cut(s)	381, 465, 580, 880, 1102, 1279, 2279
BccI	CCATC	9 cut(s)	191, 1412, 1670, 1691, 2107, 2380, 2456, 2508, 2516
BceAI	ACGGC	6 cut(s)	208, 439, 478, 655, 841, 868
BcgI	CGANNNNNNTGC	2 cut(s)	325, 359
BciT130I	CCWGG	4 cut(s)	1434, 1480, 2232, 2553
BclI	TGATCA	1 cut(s)	682
BcnI	CCSGG	7 cut(s)	150, 744, 745, 874, 1032, 1268, 1628
BcoDI	GTCTC	1 cut(s)	407
BfaI	CTAG	2 cut(s)	735, 1593
BfmI	CTRYAG	3 cut(s)	395, 766, 1668
BfoI	RGCGCY	2 cut(s)	343, 2509
Bme18I	GGWCC	7 cut(s)	349, 740, 1028, 1324, 1476, 1574, 2699
BmeRI	GACNNNNNGTC	1 cut(s)	1830
BmeT110I	CYCGRG	3 cut(s)	135, 743, 861
BmgBI	CACGTC	2 cut(s)	787, 1147
BmrI	ACTGGG	3 cut(s)	65, 1848, 2625
BmsI	GCATC	7 cut(s)	922, 1000, 1242, 1266, 1387, 1588, 1606
BmuI	ACTGGG	3 cut(s)	65, 1848, 2625
BpiI	GAAGAC	2 cut(s)	14, 1558
BpmI	CTGGAG	1 cut(s)	2283
Bpu10I	CCTNAGC	2 cut(s)	702, 1296
Bpu14I	TTCGAA	1 cut(s)	2734
BpuMI	CCSGG	7 cut(s)	150, 744, 745, 874, 1032, 1268, 1628
BsaHI	GRCGYC	2 cut(s)	177, 357
BsaWI	WCCGGW	2 cut(s)	99, 1885
Bsc4I	CCNNNNNNNGG	6 cut(s)	675, 737, 816, 856, 1267, 2296
Bse118I	RCCGGY	3 cut(s)	941, 998, 2641
Bse1I	ACTGG	7 cut(s)	71, 1075, 1843, 2082, 2093, 2266, 2620
Bse21I	CCTNAGG	3 cut(s)	308, 1578, 1799
Bse3DI	GCAATG	2 cut(s)	945, 1089
BseAI	TCCGGA	2 cut(s)	99, 1885
BseBI	CCWGG	4 cut(s)	1434, 1480, 2232, 2553
BseGI	GGATG	8 cut(s)	937, 993, 1015, 1048, 1257, 1402, 2118, 2464
BseLI	CCNNNNNNNGG	6 cut(s)	675, 737, 816, 856, 1267, 2296
BseMI	GCAATG	2 cut(s)	945, 1089
BseMII	CTCAG	8 cut(s)	322, 563, 659, 693, 1569, 1813, 1884, 2649
BseNI	ACTGG	7 cut(s)	71, 1075, 1843, 2082, 2093, 2266, 2620
BseRI	GAGGAG	5 cut(s)	35, 1154, 1286, 1626, 2144
BseSI	GKGCMC	2 cut(s)	621, 2675
BseXI	GCAGC	7 cut(s)	381, 465, 580, 880, 1102, 1279, 2279
BseYI	CCCAGC	1 cut(s)	2336
Bsh1236I	CGCG	4 cut(s)	132, 431, 510, 1051
Bsh1285I	CGRYCG	2 cut(s)	420, 447
BshNI	GGYRCC	1 cut(s)	2548
BsiEI	CGRYCG	2 cut(s)	420, 447
BsiHKAI	GWGCWC	5 cut(s)	142, 201, 324, 1218, 2205
BsiHKCI	CYCGRG	3 cut(s)	135, 743, 861
BslFI	GGGAC	7 cut(s)	52, 200, 335, 726, 880, 1041, 2353
BslI	CCNNNNNNNGG	6 cut(s)	675, 737, 816, 856, 1267, 2296
BsmAI	GTCTC	1 cut(s)	407
BsmBI	CGTCTC	1 cut(s)	407
BsmFI	GGGAC	7 cut(s)	52, 200, 335, 726, 880, 1041, 2353
BsmI	GAATGC	1 cut(s)	895
BsoBI	CYCGRG	3 cut(s)	135, 743, 861
Bsp119I	TTCGAA	1 cut(s)	2734
Bsp120I	GGGCCC	1 cut(s)	2671
Bsp1286I	GDGCHC	7 cut(s)	142, 201, 324, 621, 1218, 2205, 2675
Bsp13I	TCCGGA	2 cut(s)	99, 1885
Bsp1407I	TGTACA	2 cut(s)	1533, 1603
Bsp19I	CCATGG	1 cut(s)	1979
BspCNI	CTCAG	8 cut(s)	321, 564, 658, 694, 1570, 1812, 1885, 2650
BspEI	TCCGGA	2 cut(s)	99, 1885
BspFNI	CGCG	4 cut(s)	132, 431, 510, 1051
BspHI	TCATGA	4 cut(s)	802, 840, 1957, 2160
BspMAI	CTGCAG	1 cut(s)	399
BspT104I	TTCGAA	1 cut(s)	2734
BspT107I	GGYRCC	1 cut(s)	2548
BsrDI	GCAATG	2 cut(s)	945, 1089
BsrFI	RCCGGY	3 cut(s)	941, 998, 2641
BsrGI	TGTACA	2 cut(s)	1533, 1603
BsrI	ACTGG	7 cut(s)	71, 1075, 1843, 2082, 2093, 2266, 2620
BssAI	RCCGGY	3 cut(s)	941, 998, 2641
BssNI	GRCGYC	2 cut(s)	177, 357
BssSI	CACGAG	1 cut(s)	2100
BssT1I	CCWWGG	1 cut(s)	1979
Bst2BI	CACGAG	1 cut(s)	2100
Bst2UI	CCWGG	4 cut(s)	1434, 1480, 2232, 2553
Bst4CI	ACNGT	7 cut(s)	107, 169, 527, 774, 2174, 2610, 2707
Bst6I	CTCTTC	5 cut(s)	39, 509, 597, 1223, 2304
BstACI	GRCGYC	2 cut(s)	177, 357
BstAPI	GCANNNNNTGC	1 cut(s)	1736
BstAUI	TGTACA	2 cut(s)	1533, 1603
BstBI	TTCGAA	1 cut(s)	2734
BstC8I	GCNNGC	9 cut(s)	142, 197, 338, 708, 943, 1076, 1080, 1430, 2205
BstDSI	CCRYGG	4 cut(s)	408, 850, 1979, 2351
BstEII	GGTNACC	1 cut(s)	521
BstF5I	GGATG	8 cut(s)	937, 993, 1015, 1048, 1257, 1402, 2118, 2464
BstFNI	CGCG	4 cut(s)	132, 431, 510, 1051
BstH2I	RGCGCY	2 cut(s)	343, 2509
BstHHI	GCGC	6 cut(s)	134, 306, 342, 1051, 2508, 2632
BstMAI	GTCTC	1 cut(s)	407
BstMCI	CGRYCG	2 cut(s)	420, 447
BstNI	CCWGG	4 cut(s)	1434, 1480, 2232, 2553
BstNSI	RCATGY	1 cut(s)	2041
BstPI	GGTNACC	1 cut(s)	521
BstSFI	CTRYAG	3 cut(s)	395, 766, 1668
BstSLI	GKGCMC	2 cut(s)	621, 2675
BstUI	CGCG	4 cut(s)	132, 431, 510, 1051
BstV1I	GCAGC	7 cut(s)	381, 465, 580, 880, 1102, 1279, 2279
BstV2I	GAAGAC	2 cut(s)	14, 1558
BstX2I	RGATCY	4 cut(s)	297, 696, 2190, 2489
BstXI	CCANNNNNNTGG	2 cut(s)	2336, 2386
BstYI	RGATCY	4 cut(s)	297, 696, 2190, 2489
Bsu36I	CCTNAGG	3 cut(s)	308, 1578, 1799
BtgI	CCRYGG	4 cut(s)	408, 850, 1979, 2351
BtrI	CACGTC	2 cut(s)	787, 1147
BtsCI	GGATG	8 cut(s)	937, 993, 1015, 1048, 1257, 1402, 2118, 2464
BtsIMutI	CAGTG	3 cut(s)	2089, 2417, 2712
Cac8I	GCNNGC	9 cut(s)	142, 197, 338, 708, 943, 1076, 1080, 1430, 2205
CciI	TCATGA	4 cut(s)	802, 840, 1957, 2160
CfoI	GCGC	6 cut(s)	134, 306, 342, 1051, 2508, 2632
Cfr10I	RCCGGY	3 cut(s)	941, 998, 2641
Cfr9I	CCCGGG	1 cut(s)	743
CseI	GACGC	3 cut(s)	185, 437, 1040
Csp6I	GTAC	5 cut(s)	1351, 1534, 1604, 1634, 2183
CspCI	CAANNNNNGTGG	2 cut(s)	1103, 1138
CviQI	GTAC	5 cut(s)	1351, 1534, 1604, 1634, 2183
DriI	GACNNNNNGTC	1 cut(s)	1830
Eam1104I	CTCTTC	5 cut(s)	39, 509, 597, 1223, 2304
Eam1105I	GACNNNNNGTC	1 cut(s)	1830
EarI	CTCTTC	5 cut(s)	39, 509, 597, 1223, 2304
EciI	GGCGGA	1 cut(s)	318
Ecl136II	GAGCTC	3 cut(s)	140, 199, 322
Eco130I	CCWWGG	1 cut(s)	1979
Eco24I	GRGCYC	4 cut(s)	142, 201, 324, 2675
Eco32I	GATATC	1 cut(s)	1845
Eco47I	GGWCC	7 cut(s)	349, 740, 1028, 1324, 1476, 1574, 2699
Eco47III	AGCGCT	1 cut(s)	341
Eco53kI	GAGCTC	3 cut(s)	140, 199, 322
Eco57I	CTGAAG	3 cut(s)	2202, 2460, 2556
Eco81I	CCTNAGG	3 cut(s)	308, 1578, 1799
Eco88I	CYCGRG	3 cut(s)	135, 743, 861
Eco91I	GGTNACC	1 cut(s)	521
EcoICRI	GAGCTC	3 cut(s)	140, 199, 322
EcoO109I	RGGNCCY	5 cut(s)	349, 633, 740, 1476, 2671
EcoO65I	GGTNACC	1 cut(s)	521
EcoRI	GAATTC	1 cut(s)	541
EcoRII	CCWGG	4 cut(s)	1432, 1478, 2230, 2551
EcoRV	GATATC	1 cut(s)	1845
EcoT14I	CCWWGG	1 cut(s)	1979
EcoT38I	GRGCYC	4 cut(s)	142, 201, 324, 2675
ErhI	CCWWGG	1 cut(s)	1979
Esp3I	CGTCTC	1 cut(s)	407
FalI	AAGNNNNNCTT	2 cut(s)	706, 738
FaqI	GGGAC	7 cut(s)	52, 200, 335, 726, 880, 1041, 2353
FauI	CCCGC	3 cut(s)	341, 1087, 1269
FbaI	TGATCA	1 cut(s)	682
FblI	GTMKAC	1 cut(s)	2612
FokI	GGATG	8 cut(s)	944, 1000, 1022, 1055, 1264, 1409, 2125, 2471
FriOI	GRGCYC	4 cut(s)	142, 201, 324, 2675
FspBI	CTAG	2 cut(s)	735, 1593
GlaI	GCGC	6 cut(s)	133, 305, 341, 1050, 2507, 2631
GsaI	CCCAGC	1 cut(s)	2340
GsuI	CTGGAG	1 cut(s)	2283
HaeII	RGCGCY	2 cut(s)	343, 2509
HgaI	GACGC	3 cut(s)	185, 437, 1040
HhaI	GCGC	6 cut(s)	134, 306, 342, 1051, 2508, 2632
Hin1I	GRCGYC	2 cut(s)	177, 357
Hin6I	GCGC	6 cut(s)	132, 304, 340, 1049, 2506, 2630
HinP1I	GCGC	6 cut(s)	132, 304, 340, 1049, 2506, 2630
HincII	GTYRAC	2 cut(s)	2305, 2712
HindII	GTYRAC	2 cut(s)	2305, 2712
HindIII	AAGCTT	3 cut(s)	715, 2470, 2528
HinfI	GANTC	9 cut(s)	225, 755, 806, 832, 1160, 1346, 1825, 2240, 2716
HpaI	GTTAAC	2 cut(s)	2305, 2712
Hpy166II	GTNNAC	8 cut(s)	502, 1324, 2305, 2392, 2429, 2447, 2613, 2712
Hpy188I	TCNGA	8 cut(s)	190, 460, 760, 1815, 2069, 2128, 2373, 2575
Hpy8I	GTNNAC	8 cut(s)	502, 1324, 2305, 2392, 2429, 2447, 2613, 2712
HpyAV	CCTTC	8 cut(s)	50, 59, 574, 966, 1569, 2133, 2435, 2693
HpyCH4III	ACNGT	7 cut(s)	107, 169, 527, 774, 2174, 2610, 2707
HpyCH4IV	ACGT	7 cut(s)	357, 504, 786, 980, 1146, 2008, 2301
HpyCH4V	TGCA	9 cut(s)	126, 397, 904, 1061, 1279, 1360, 1619, 2105, 2602
HpySE526I	ACGT	7 cut(s)	357, 504, 786, 980, 1146, 2008, 2301
Hsp92I	GRCGYC	2 cut(s)	177, 357
HspAI	GCGC	6 cut(s)	132, 304, 340, 1049, 2506, 2630
Kpn2I	TCCGGA	2 cut(s)	99, 1885
KroI	GCCGGC	1 cut(s)	941
KroNI	GCCGGC	1 cut(s)	943
Ksp22I	TGATCA	1 cut(s)	682
KspAI	GTTAAC	2 cut(s)	2305, 2712
LmnI	GCTCC	5 cut(s)	439, 1150, 1757, 1922, 2264
Lsp1109I	GCAGC	7 cut(s)	381, 465, 580, 880, 1102, 1279, 2279
LweI	GCATC	7 cut(s)	922, 1000, 1242, 1266, 1387, 1588, 1606
MaeI	CTAG	2 cut(s)	735, 1593
MaeII	ACGT	7 cut(s)	357, 504, 786, 980, 1146, 2008, 2301
MaeIII	GTNAC	8 cut(s)	59, 107, 521, 1066, 1312, 1582, 1649, 2033
MflI	RGATCY	4 cut(s)	297, 696, 2190, 2489
MhlI	GDGCHC	7 cut(s)	142, 201, 324, 621, 1218, 2205, 2675
MluCI	AATT	7 cut(s)	531, 541, 1126, 1507, 1916, 2564, 2634
MlyI	GAGTC	2 cut(s)	1340, 1819
MmeI	TCCRAC	3 cut(s)	213, 483, 2351
MroI	TCCGGA	2 cut(s)	99, 1885
MroNI	GCCGGC	1 cut(s)	941
MseI	TTAA	6 cut(s)	777, 1335, 1392, 2304, 2541, 2711
MslI	CAYNNNNRTG	3 cut(s)	690, 2384, 2408
MspA1I	CMGCKG	4 cut(s)	571, 1093, 1784, 2438
Mva1269I	GAATGC	1 cut(s)	895
MvaI	CCWGG	4 cut(s)	1434, 1480, 2232, 2553
MvnI	CGCG	4 cut(s)	132, 431, 510, 1051
NaeI	GCCGGC	1 cut(s)	943
NciI	CCSGG	7 cut(s)	150, 744, 745, 874, 1032, 1268, 1628
NcoI	CCATGG	1 cut(s)	1979
NgoMIV	GCCGGC	1 cut(s)	941
NmeAIII	GCCGAG	1 cut(s)	961
NmuCI	GTSAC	2 cut(s)	59, 1066
NspI	RCATGY	1 cut(s)	2041
NspV	TTCGAA	1 cut(s)	2734
OliI	CACNNNNGTG	1 cut(s)	2408
PagI	TCATGA	4 cut(s)	802, 840, 1957, 2160
PciI	ACATGT	1 cut(s)	2037
PcsI	WCGNNNNNNNCGW	5 cut(s)	321, 351, 492, 501, 2359
PctI	GAATGC	1 cut(s)	895
PdiI	GCCGGC	1 cut(s)	943
PfeI	GAWTC	7 cut(s)	225, 755, 806, 832, 1160, 2240, 2716
PflMI	CCANNNNNTGG	1 cut(s)	2296
Ple19I	CGATCG	1 cut(s)	420
PleI	GAGTC	2 cut(s)	1340, 1819
PpsI	GAGTC	2 cut(s)	1340, 1819
PpuMI	RGGWCCY	3 cut(s)	349, 740, 1476
PscI	ACATGT	1 cut(s)	2037
Psp124BI	GAGCTC	3 cut(s)	142, 201, 324
Psp5II	RGGWCCY	3 cut(s)	349, 740, 1476
Psp6I	CCWGG	4 cut(s)	1432, 1478, 2230, 2551
PspEI	GGTNACC	1 cut(s)	521
PspFI	CCCAGC	1 cut(s)	2336
PspGI	CCWGG	4 cut(s)	1432, 1478, 2230, 2551
PspOMI	GGGCCC	1 cut(s)	2671
PspPPI	RGGWCCY	3 cut(s)	349, 740, 1476
PsrI	GAACNNNNNNTAC	2 cut(s)	2384, 2416
PstI	CTGCAG	1 cut(s)	399
PsuI	RGATCY	4 cut(s)	297, 696, 2190, 2489
PvuI	CGATCG	1 cut(s)	420
PvuII	CAGCTG	3 cut(s)	571, 1093, 1784
RsaI	GTAC	5 cut(s)	1352, 1535, 1605, 1635, 2184
RsaNI	GTAC	5 cut(s)	1351, 1534, 1604, 1634, 2183
RseI	CAYNNNNRTG	3 cut(s)	690, 2384, 2408
SacI	GAGCTC	3 cut(s)	142, 201, 324
SaqAI	TTAA	6 cut(s)	777, 1335, 1392, 2304, 2541, 2711
SchI	GAGTC	2 cut(s)	1340, 1819
SduI	GDGCHC	7 cut(s)	142, 201, 324, 621, 1218, 2205, 2675
SfaNI	GCATC	7 cut(s)	922, 1000, 1242, 1266, 1387, 1588, 1606
SfcI	CTRYAG	3 cut(s)	395, 766, 1668
SfuI	TTCGAA	1 cut(s)	2734
SinI	GGWCC	7 cut(s)	349, 740, 1028, 1324, 1476, 1574, 2699
SmaI	CCCGGG	1 cut(s)	745
SmiMI	CAYNNNNRTG	3 cut(s)	690, 2384, 2408
Sse9I	AATT	7 cut(s)	531, 541, 1126, 1507, 1916, 2564, 2634
SspI	AATATT	1 cut(s)	2763
SspMI	CTAG	2 cut(s)	735, 1593
SstI	GAGCTC	3 cut(s)	142, 201, 324
StyI	CCWWGG	1 cut(s)	1979
TaaI	ACNGT	7 cut(s)	107, 169, 527, 774, 2174, 2610, 2707
TaiI	ACGT	7 cut(s)	360, 507, 789, 983, 1149, 2011, 2304
TaqII	GACCGA	2 cut(s)	433, 2376
TasI	AATT	7 cut(s)	531, 541, 1126, 1507, 1916, 2564, 2634
TatI	WGTACW	2 cut(s)	1533, 1603
TauI	GCSGC	5 cut(s)	182, 434, 484, 1090, 2438
TfiI	GAWTC	7 cut(s)	225, 755, 806, 832, 1160, 2240, 2716
Tru1I	TTAA	6 cut(s)	777, 1335, 1392, 2304, 2541, 2711
Tru9I	TTAA	6 cut(s)	777, 1335, 1392, 2304, 2541, 2711
TscAI	CASTG	3 cut(s)	2089, 2424, 2712
TseFI	GTSAC	2 cut(s)	59, 1066
TseI	GCWGC	7 cut(s)	394, 478, 568, 893, 1090, 1292, 2267
Tsp45I	GTSAC	2 cut(s)	59, 1066
TspDTI	ATGAA	7 cut(s)	17, 35, 791, 829, 1428, 1565, 2675
TspGWI	ACGGA	7 cut(s)	425, 426, 480, 526, 638, 1176, 2368
TspMI	CCCGGG	1 cut(s)	743
TspRI	CASTG	3 cut(s)	2089, 2424, 2712
Van91I	CCANNNNNTGG	1 cut(s)	2296
VpaK11BI	GGWCC	7 cut(s)	349, 740, 1028, 1324, 1476, 1574, 2699
XapI	RAATTY	1 cut(s)	541
XceI	RCATGY	1 cut(s)	2041
XcmI	CCANNNNNNNNNTGG	1 cut(s)	78
XmaI	CCCGGG	1 cut(s)	743
XmiI	GTMKAC	1 cut(s)	2612
XspI	CTAG	2 cut(s)	735, 1593
ZraI	GACGTC	1 cut(s)	358

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.