Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0002632

Physical Location & Seq

Genomic Coordinates Reverse (-)

34207389 .. 34213746

Gene Structure 6358 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018707

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2772 bp

ATGAAGAAGACCCAGAAGATGAACAATCTCACGCTTCTCCTCCTCCTTCTCCTCCTCACCTGTCACCTCTCCCCAGTTCTCTCATGGAAAAAAGACGAGTTCCGAAACTGTAACCAAACCCCTTTCTGCAAACGAGCCCGAGCTCGCAACCCCGGCTCGTCCTCCCTCACAGTCCAAGACGCCGCCATCTCCGACGGCGAGCTCACCGCCAAGCTCGTCCCCAAGAGAATCGAACAAGAAGAAACCAGCCCCAATCAAATCAAGCCCTTGCTTCTCACTCTCTCCGCTTACCAAGACGGGATCTTGCGCTTCAGGATAGACGAGCTCGATCCGCCCCGGAAGCGCTTCGAGGTCCCCGACGTCGTTTTGCCGGAGTTCGAGGGCAAGAAGCTCTGGCTGCAGAGGCTTTCCACCGAGACGATCGACGGCGACGCGGCTCCATCGTCGGTCGTGTTCTTATCCGACGGCTACGAGGCGGTGCTGCGGCAAGATCCGTTCGAGGTTTACGTCCGCGAGAAGAGGGGTAACCGTGTAATTTCCGTGAATTCCAATGGCTTATTTGATTTTGAGCAGCTGAGAGAGAAGGGAGAGGGTGAGGATTGGGAAGAGAGGTTTAGAGGGCACACGGATAAGAGGCCCTACGGCCCTCAGTCCATTAGTTTTGATGTGTCCTTTTATGGGGCTGATCATGTTTATGGGATCCCTGAGCGTGCTTCAAGCTTTGCTTTGAAGCCCACTAGAGGTCCCGGGGTTGAGGAATCTGAACCCTATAGACTGTTTAATTTGGATGTGTTTGAGTATATTCATGATTCCCCATTCGGGCTTTACGGCTCGATTCCATTCATGATTTCCCACGGCAAGGCCCGAGGGACTTCCGGGTTCTTTTGGTTGAATGCTGCTGAAATGCAGATTGATGTTCTTGGGAACGGGTGGGATGGCGAGGCCGGCATTGCTCTCCCTTCGTCGCAGAGTAGGATTGACACGTTTTGGATGAGTGAGGCCGGTATTGTGGATGCTTTCTTTTTCGTGGGACCGGGGCCGAAGGATGTAGCGCGTCAGTATGCGAGTGTGACTGGCACGCCCGCAATGCCGCAGCTTTTTGCTGTGGCGTATCACCAATGTAGGTGGAATTATAGAGATGAGGAGGATGTGGAGCAAGTTGATTCTAAGTTTGATGAGCATGATATTCCGTATGATGTTTTGTGGCTTGATATTGAGCACACGGATGGGAAGAGGTATTTTACATGGGATAGGATGCTTTTCCCTCACCCGGAGGAGATGCAGAGGAAGTTGGCTGCTAAGGGTAGGCACATGGTTACTATTGTGGACCCTCATATTAAGCGAGATGACTCGTACTTTTTGCACAGGGAGGCCACAGAAAAAGGCTATTATGTTAAGGACGCCAATGGGAATGATTACGATGGGTGGTGCTGGCCTGGTTCATCATCATATTTGGATATGTTGAGGCCAGAGGTTAGGTCCTGGTGGGCTACAAAGTTCTCAACTGAAAATTATGTTGGTTCAACTCCCTCCTTGTACATCTGGAATGACATGAATGAGCCTTCCGTCTTCAATGGTCCTGAGGTGACAATGCCTAGAGATGCTGTACATCGAGGAGATGCAGAACACCGGGAGGTACATAACGCCTATGGTTACTACTTTCACATGGCTACAGCAGATGGGCTTGTTCAGCGAGGTGATGGAAAGGATAGGCCATTTGTTTTATCGAGAGCAGTATTTGCTGGAAGTCAAAGGCATGGAGCAATATGGACGGGAGATAATACAGCTGAATGGGATCACCTCAGGGTTTCAGTTCCGATGATTTTGACTCTTGGTCTTACTGGGATATCATTTTCTGGTGCTGATGTGGGTGGGTTTTTTGGCAATCCGGAACCTGAGTTGTTAGTTCGTTGGTATCAATTAGGAGCCTACTATCCTTTCTTTAGAGGTCATGCTCATCATGACACCAAAAGACGAGAACCATGGTTATTTGGAGAAAAAAACACTCAACGTATGAGGGAGGCTATACACACCCGTTACATGTTGCTTCCATACTTTTACACATTATTCAGAGAGGCAAACACCAGTGGTGTTCCAGTTGCTCGTCCATTGTGGATGGAGTTTCCTTCCGAGGAGGCTACTTTCACAAATGATGAGGCTCTCATGATTGGAAACAGTCTTTTGGTACAAGGGATCTATACAGAGCACGCAAAACATACTTCAGTTTATTTGCCCGGGAAAGAATCATGGTATGATGTGAAAACTGGAGCAGCTTACAAGGGAGGTAAGACCCATACGCTGGACGTTAATGAAGAGGGTGTTCCTGCTTTCCAGAGGGCTGGGACTATCATACCACGGAAAGACCGATTTCGTCGGAGTTCCACCCAGATGGTGAACGATCCATACACTCTGGTGATAGCACTGAATAGTTCACAAGCAGCTGAAGGTGAACTCTATGTGGATGATGGAAAAAGCTTTGAGTTTCAGCAAGGATCCTATATCCATCGGCGCTTTGTTTTCGCAGATGGGAAGCTTACATCTCTTAATCTGGCACCTGGACAAACCCAATTTTCTTCAGAATGTGTTATTGAGAGGATTATTCTGCAAGGACTGTCTACTGGGCAAAAGAGTGCGCTAATTGAACCGGCAAATCAAAAGGCTGAGATTGAACGGGGTCCGCTTCTCCTTCATTCAAGGCAAGGACCAACAGTGTTAACGATTCGTAAGCCTAATGTTCGGATAGCAGATGATTGGGTCATAAAACTATTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000902 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005975 GO:0005976 GO:0006073 GO:0006464 GO:0006491 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009250 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009653 GO:0009826 GO:0009987 GO:0010035 GO:0010038 GO:0012505 GO:0015926 GO:0016043 GO:0016049 GO:0016051 GO:0016787 GO:0016798 GO:0019538 GO:0030243 GO:0030244 GO:0030587 GO:0031288 GO:0032502 GO:0032989 GO:0033692 GO:0033919 GO:0034637 GO:0034645 GO:0036211 GO:0040007 GO:0042221 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043687 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048589 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0051274 GO:0051703 GO:0051704 GO:0051707 GO:0060560 GO:0071704 GO:0071840 GO:0090599 GO:0090600 GO:0090702 GO:0098542 GO:0099120 GO:1901135 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 ko01100 ko04141 map00510 map01100 map04141

Pfam Domains

Protein Families

DUF5110 Gal_mutarotas_2 Glyco_hydro_31

Protein Analysis

924

Amino Acids

105.1

Weight (kDa)

5.8

Isoelectric Point (pI)

41.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gal_mutarotas_2	PF13802	92 - 305	5.9e-41	Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
Glyco_hydro_31_2nd	PF01055	361 - 689	3.4e-122	Glycosyl hydrolases family 31 TIM-barrel domain
Glyco_hydro_31_3rd	PF21365	697 - 784	1.8e-23	Glycosyl hydrolase family 31 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002632)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63840 AT5G63840
fragaria_vesca	FvH4_1g25070
malus_domestica	MD01G1007800.v1.1 MD01G1007900.v1.1 MD15G1135800.v1.1
prunus_persica	Prupe.4G277800_v2.0.a1 Prupe.4G277800_v2.0.a1
pyrus_communis	pycom15g12240 pycom520g00330
rosa_chinensis	RchiOBHm_Chr2g0122711 RchiOBHm_Chr2g0122721
rosa_laevigata	RLG00000018707 RLG00000018709
rosa_multiflora	Rmu_sc0005370.1_g000002 Rmu_sc0008259.1_g000009 Rmu_sc0008259.1_g000014 Rmu_sc0017734.1_g000006 Rmu_sc0026486.1_g000001
rosa_roxburghii	Rroxscaffold_1G00031190 Rroxscaffold_2G00121270 Rroxscaffold_2G00121280 Rroxscaffold_4G00297410 Rroxscaffold_4G00317480 Rroxscaffold_4G00325980 Rroxscaffold_7G00197700 Rroxscaffold_7G00199130
rosa_rugosa	Rorug02G0241800 Rorug02G0241800 Rorug02G0241900 Rorug02G0242000 Rorug02G0242100
rosa_samantha	Rh2AG300300 Rh2BG308200 Rh2CG286400 Rh2CG286900 Rh2DG324500
rosa_wichuraiana	Rw2G023850 Rw2G023860 Rw2G024040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	363
AccB1I	GGYRCC	1 cut(s)	2551
AccB7I	CCANNNNNTGG	1 cut(s)	2299
AccI	GTMKAC	1 cut(s)	2615
AccII	CGCG	3 cut(s)	434, 513, 1054
AccIII	TCCGGA	1 cut(s)	1888
AcsI	RAATTY	1 cut(s)	544
AcuI	CTGAAG	4 cut(s)	295, 2205, 2463, 2559
AcyI	GRCGYC	3 cut(s)	180, 360, 1401
AfaI	GTAC	5 cut(s)	1355, 1538, 1608, 1638, 2187
AfeI	AGCGCT	1 cut(s)	344
AfiI	CCNNNNNNNGG	6 cut(s)	678, 740, 819, 859, 1270, 2299
AflIII	ACRYGT	2 cut(s)	981, 2040
AgsI	TTSAA	8 cut(s)	717, 730, 892, 1524, 1573, 2642, 2669, 2694
AhdI	GACNNNNNGTC	1 cut(s)	1833
AjnI	CCWGG	3 cut(s)	1435, 1481, 2554
AjuI	GAANNNNNNNTTGG	2 cut(s)	1500, 1532
AleI	CACNNNNGTG	1 cut(s)	2411
Alw21I	GWGCWC	5 cut(s)	145, 204, 327, 1221, 2208
Alw26I	GTCTC	1 cut(s)	410
Ama87I	CYCGRG	4 cut(s)	138, 746, 864, 2234
Aor13HI	TCCGGA	1 cut(s)	1888
Aor51HI	AGCGCT	1 cut(s)	344
ApeKI	GCWGC	8 cut(s)	397, 481, 571, 896, 1093, 1295, 2270, 2438
ApoI	RAATTY	1 cut(s)	544
Asp700I	GAANNNNTTC	1 cut(s)	344
AspLEI	GCGC	5 cut(s)	309, 345, 1054, 2511, 2635
AvaI	CYCGRG	4 cut(s)	138, 746, 864, 2234
AvaII	GGWCC	8 cut(s)	352, 743, 1031, 1327, 1479, 1577, 2675, 2702
AxyI	CCTNAGG	2 cut(s)	1581, 1802
BaeGI	GKGCMC	1 cut(s)	624
BamHI	GGATCC	2 cut(s)	699, 2492
BanI	GGYRCC	1 cut(s)	2551
BanII	GRGCYC	4 cut(s)	139, 145, 204, 327
BbsI	GAAGAC	2 cut(s)	14, 1561
Bbv12I	GWGCWC	5 cut(s)	145, 204, 327, 1221, 2208
BbvI	GCAGC	8 cut(s)	384, 468, 583, 883, 1105, 1282, 2282, 2450
BceAI	ACGGC	6 cut(s)	211, 442, 481, 658, 844, 871
BciT130I	CCWGG	3 cut(s)	1437, 1483, 2556
BclI	TGATCA	1 cut(s)	685
BcoDI	GTCTC	1 cut(s)	410
BfaI	CTAG	2 cut(s)	738, 1596
BfmI	CTRYAG	3 cut(s)	398, 769, 1671
BfoI	RGCGCY	2 cut(s)	346, 2512
Bme18I	GGWCC	8 cut(s)	352, 743, 1031, 1327, 1479, 1577, 2675, 2702
BmeRI	GACNNNNNGTC	1 cut(s)	1833
BmeT110I	CYCGRG	4 cut(s)	138, 746, 864, 2234
BmrI	ACTGGG	3 cut(s)	68, 1851, 2628
BmsI	GCATC	5 cut(s)	1003, 1245, 1269, 1591, 1609
BmuI	ACTGGG	3 cut(s)	68, 1851, 2628
BpiI	GAAGAC	2 cut(s)	14, 1561
BpmI	CTGGAG	1 cut(s)	2286
Bpu10I	CCTNAGC	2 cut(s)	705, 1299
BsaHI	GRCGYC	3 cut(s)	180, 360, 1401
BsaWI	WCCGGW	1 cut(s)	1888
Bsc4I	CCNNNNNNNGG	6 cut(s)	678, 740, 819, 859, 1270, 2299
Bse118I	RCCGGY	3 cut(s)	944, 1001, 2644
Bse1I	ACTGG	7 cut(s)	74, 1078, 1846, 2085, 2096, 2269, 2623
Bse21I	CCTNAGG	2 cut(s)	1581, 1802
Bse3DI	GCAATG	2 cut(s)	948, 1092
BseAI	TCCGGA	1 cut(s)	1888
BseBI	CCWGG	3 cut(s)	1437, 1483, 2556
BseLI	CCNNNNNNNGG	6 cut(s)	678, 740, 819, 859, 1270, 2299
BseMI	GCAATG	2 cut(s)	948, 1092
BseMII	CTCAG	7 cut(s)	566, 662, 696, 1572, 1816, 1887, 2652
BseNI	ACTGG	7 cut(s)	74, 1078, 1846, 2085, 2096, 2269, 2623
BseRI	GAGGAG	8 cut(s)	29, 32, 41, 44, 1157, 1289, 1629, 2147
BseSI	GKGCMC	1 cut(s)	624
BseXI	GCAGC	8 cut(s)	384, 468, 583, 883, 1105, 1282, 2282, 2450
BseYI	CCCAGC	1 cut(s)	2339
Bsh1236I	CGCG	3 cut(s)	434, 513, 1054
Bsh1285I	CGRYCG	2 cut(s)	423, 450
BshNI	GGYRCC	1 cut(s)	2551
BsiEI	CGRYCG	2 cut(s)	423, 450
BsiHKAI	GWGCWC	5 cut(s)	145, 204, 327, 1221, 2208
BsiHKCI	CYCGRG	4 cut(s)	138, 746, 864, 2234
BslFI	GGGAC	6 cut(s)	203, 338, 729, 883, 1044, 2356
BslI	CCNNNNNNNGG	6 cut(s)	678, 740, 819, 859, 1270, 2299
BsmAI	GTCTC	1 cut(s)	410
BsmBI	CGTCTC	1 cut(s)	410
BsmFI	GGGAC	6 cut(s)	203, 338, 729, 883, 1044, 2356
BsmI	GAATGC	1 cut(s)	898
BsoBI	CYCGRG	4 cut(s)	138, 746, 864, 2234
Bsp1286I	GDGCHC	7 cut(s)	139, 145, 204, 327, 624, 1221, 2208
Bsp13I	TCCGGA	1 cut(s)	1888
Bsp1407I	TGTACA	2 cut(s)	1536, 1606
Bsp19I	CCATGG	1 cut(s)	1982
BspCNI	CTCAG	7 cut(s)	567, 661, 697, 1573, 1815, 1888, 2653
BspEI	TCCGGA	1 cut(s)	1888
BspFNI	CGCG	3 cut(s)	434, 513, 1054
BspHI	TCATGA	4 cut(s)	805, 843, 1960, 2163
BspMAI	CTGCAG	1 cut(s)	402
BspT107I	GGYRCC	1 cut(s)	2551
BsrDI	GCAATG	2 cut(s)	948, 1092
BsrFI	RCCGGY	3 cut(s)	944, 1001, 2644
BsrGI	TGTACA	2 cut(s)	1536, 1606
BsrI	ACTGG	7 cut(s)	74, 1078, 1846, 2085, 2096, 2269, 2623
BssAI	RCCGGY	3 cut(s)	944, 1001, 2644
BssNI	GRCGYC	3 cut(s)	180, 360, 1401
BssT1I	CCWWGG	1 cut(s)	1982
Bst2UI	CCWGG	3 cut(s)	1437, 1483, 2556
Bst4CI	ACNGT	7 cut(s)	110, 172, 530, 777, 2177, 2613, 2710
Bst6I	CTCTTC	4 cut(s)	512, 600, 1226, 2307
BstACI	GRCGYC	3 cut(s)	180, 360, 1401
BstAPI	GCANNNNNTGC	1 cut(s)	1739
BstAUI	TGTACA	2 cut(s)	1536, 1606
BstC8I	GCNNGC	8 cut(s)	145, 200, 711, 946, 1079, 1083, 1433, 2208
BstDEI	CTNAG	9 cut(s)	575, 648, 705, 1167, 1299, 1581, 1802, 1896, 2661
BstDSI	CCRYGG	3 cut(s)	853, 1982, 2354
BstEII	GGTNACC	1 cut(s)	524
BstFNI	CGCG	3 cut(s)	434, 513, 1054
BstH2I	RGCGCY	2 cut(s)	346, 2512
BstHHI	GCGC	5 cut(s)	309, 345, 1054, 2511, 2635
BstMAI	GTCTC	1 cut(s)	410
BstMCI	CGRYCG	2 cut(s)	423, 450
BstNI	CCWGG	3 cut(s)	1437, 1483, 2556
BstNSI	RCATGY	1 cut(s)	2044
BstPI	GGTNACC	1 cut(s)	524
BstSFI	CTRYAG	3 cut(s)	398, 769, 1671
BstSLI	GKGCMC	1 cut(s)	624
BstUI	CGCG	3 cut(s)	434, 513, 1054
BstV1I	GCAGC	8 cut(s)	384, 468, 583, 883, 1105, 1282, 2282, 2450
BstV2I	GAAGAC	2 cut(s)	14, 1561
BstX2I	RGATCY	5 cut(s)	300, 490, 699, 2193, 2492
BstXI	CCANNNNNNTGG	2 cut(s)	2339, 2389
BstYI	RGATCY	5 cut(s)	300, 490, 699, 2193, 2492
Bsu36I	CCTNAGG	2 cut(s)	1581, 1802
BtgI	CCRYGG	3 cut(s)	853, 1982, 2354
BtsIMutI	CAGTG	3 cut(s)	2092, 2420, 2715
Cac8I	GCNNGC	8 cut(s)	145, 200, 711, 946, 1079, 1083, 1433, 2208
CciI	TCATGA	4 cut(s)	805, 843, 1960, 2163
CfoI	GCGC	5 cut(s)	309, 345, 1054, 2511, 2635
Cfr10I	RCCGGY	3 cut(s)	944, 1001, 2644
Cfr9I	CCCGGG	2 cut(s)	746, 2234
CseI	GACGC	4 cut(s)	188, 440, 1043, 1409
Csp6I	GTAC	5 cut(s)	1354, 1537, 1607, 1637, 2186
CspCI	CAANNNNNGTGG	2 cut(s)	1106, 1141
CviQI	GTAC	5 cut(s)	1354, 1537, 1607, 1637, 2186
DdeI	CTNAG	9 cut(s)	575, 648, 705, 1167, 1299, 1581, 1802, 1896, 2661
DriI	GACNNNNNGTC	1 cut(s)	1833
Eam1104I	CTCTTC	4 cut(s)	512, 600, 1226, 2307
Eam1105I	GACNNNNNGTC	1 cut(s)	1833
EarI	CTCTTC	4 cut(s)	512, 600, 1226, 2307
EciI	GGCGGA	1 cut(s)	321
Ecl136II	GAGCTC	3 cut(s)	143, 202, 325
Eco130I	CCWWGG	1 cut(s)	1982
Eco24I	GRGCYC	4 cut(s)	139, 145, 204, 327
Eco32I	GATATC	1 cut(s)	1848
Eco47I	GGWCC	8 cut(s)	352, 743, 1031, 1327, 1479, 1577, 2675, 2702
Eco47III	AGCGCT	1 cut(s)	344
Eco53kI	GAGCTC	3 cut(s)	143, 202, 325
Eco57I	CTGAAG	4 cut(s)	295, 2205, 2463, 2559
Eco81I	CCTNAGG	2 cut(s)	1581, 1802
Eco88I	CYCGRG	4 cut(s)	138, 746, 864, 2234
Eco91I	GGTNACC	1 cut(s)	524
EcoICRI	GAGCTC	3 cut(s)	143, 202, 325
EcoO109I	RGGNCCY	4 cut(s)	352, 636, 743, 1479
EcoO65I	GGTNACC	1 cut(s)	524
EcoRI	GAATTC	1 cut(s)	544
EcoRII	CCWGG	3 cut(s)	1435, 1481, 2554
EcoRV	GATATC	1 cut(s)	1848
EcoT14I	CCWWGG	1 cut(s)	1982
EcoT38I	GRGCYC	4 cut(s)	139, 145, 204, 327
ErhI	CCWWGG	1 cut(s)	1982
Esp3I	CGTCTC	1 cut(s)	410
FalI	AAGNNNNNCTT	2 cut(s)	709, 741
FaqI	GGGAC	6 cut(s)	203, 338, 729, 883, 1044, 2356
FauI	CCCGC	1 cut(s)	1090
FbaI	TGATCA	1 cut(s)	685
FblI	GTMKAC	1 cut(s)	2615
FriOI	GRGCYC	4 cut(s)	139, 145, 204, 327
FspBI	CTAG	2 cut(s)	738, 1596
GlaI	GCGC	5 cut(s)	308, 344, 1053, 2510, 2634
GsaI	CCCAGC	1 cut(s)	2343
GsuI	CTGGAG	1 cut(s)	2286
HaeII	RGCGCY	2 cut(s)	346, 2512
HgaI	GACGC	4 cut(s)	188, 440, 1043, 1409
HhaI	GCGC	5 cut(s)	309, 345, 1054, 2511, 2635
Hin1I	GRCGYC	3 cut(s)	180, 360, 1401
Hin6I	GCGC	5 cut(s)	307, 343, 1052, 2509, 2633
HinP1I	GCGC	5 cut(s)	307, 343, 1052, 2509, 2633
HincII	GTYRAC	1 cut(s)	2715
HindII	GTYRAC	1 cut(s)	2715
HindIII	AAGCTT	3 cut(s)	718, 2473, 2531
HinfI	GANTC	9 cut(s)	228, 758, 809, 835, 1163, 1349, 1828, 2243, 2719
HpaI	GTTAAC	1 cut(s)	2715
Hpy166II	GTNNAC	7 cut(s)	505, 1327, 2395, 2432, 2450, 2616, 2715
Hpy8I	GTNNAC	7 cut(s)	505, 1327, 2395, 2432, 2450, 2616, 2715
Hpy99I	CGWCG	9 cut(s)	197, 362, 365, 428, 434, 448, 467, 967, 2376
HpyAV	CCTTC	8 cut(s)	56, 577, 969, 1036, 1572, 2136, 2438, 2696
HpyCH4III	ACNGT	7 cut(s)	110, 172, 530, 777, 2177, 2613, 2710
HpyCH4IV	ACGT	5 cut(s)	360, 507, 983, 2011, 2304
HpyCH4V	TGCA	7 cut(s)	129, 400, 907, 1282, 1363, 1622, 2605
HpyF3I	CTNAG	9 cut(s)	575, 648, 705, 1167, 1299, 1581, 1802, 1896, 2661
HpySE526I	ACGT	5 cut(s)	360, 507, 983, 2011, 2304
Hsp92I	GRCGYC	3 cut(s)	180, 360, 1401
HspAI	GCGC	5 cut(s)	307, 343, 1052, 2509, 2633
Kpn2I	TCCGGA	1 cut(s)	1888
KroI	GCCGGC	1 cut(s)	944
KroNI	GCCGGC	1 cut(s)	946
Ksp22I	TGATCA	1 cut(s)	685
KspAI	GTTAAC	1 cut(s)	2715
LmnI	GCTCC	5 cut(s)	442, 1153, 1760, 1925, 2267
Lsp1109I	GCAGC	8 cut(s)	384, 468, 583, 883, 1105, 1282, 2282, 2450
LweI	GCATC	5 cut(s)	1003, 1245, 1269, 1591, 1609
MaeI	CTAG	2 cut(s)	738, 1596
MaeII	ACGT	5 cut(s)	360, 507, 983, 2011, 2304
MaeIII	GTNAC	8 cut(s)	62, 110, 524, 1069, 1315, 1585, 1652, 2036
MflI	RGATCY	5 cut(s)	300, 490, 699, 2193, 2492
MhlI	GDGCHC	7 cut(s)	139, 145, 204, 327, 624, 1221, 2208
MluCI	AATT	8 cut(s)	534, 544, 781, 1129, 1510, 1919, 2567, 2637
MlyI	GAGTC	2 cut(s)	1343, 1822
MmeI	TCCRAC	3 cut(s)	216, 486, 2354
MroI	TCCGGA	1 cut(s)	1888
MroNI	GCCGGC	1 cut(s)	944
MroXI	GAANNNNTTC	1 cut(s)	344
MseI	TTAA	6 cut(s)	780, 1338, 1395, 2307, 2544, 2714
MslI	CAYNNNNRTG	4 cut(s)	693, 1224, 2387, 2411
MspA1I	CMGCKG	3 cut(s)	574, 1787, 2441
Mva1269I	GAATGC	1 cut(s)	898
MvaI	CCWGG	3 cut(s)	1437, 1483, 2556
MvnI	CGCG	3 cut(s)	434, 513, 1054
NaeI	GCCGGC	1 cut(s)	946
NcoI	CCATGG	1 cut(s)	1982
NgoMIV	GCCGGC	1 cut(s)	944
NmuCI	GTSAC	3 cut(s)	62, 1069, 1585
NspI	RCATGY	1 cut(s)	2044
OliI	CACNNNNGTG	1 cut(s)	2411
PagI	TCATGA	4 cut(s)	805, 843, 1960, 2163
PciI	ACATGT	1 cut(s)	2040
PcsI	WCGNNNNNNNCGW	3 cut(s)	354, 504, 2362
PctI	GAATGC	1 cut(s)	898
PdiI	GCCGGC	1 cut(s)	946
PdmI	GAANNNNTTC	1 cut(s)	344
PfeI	GAWTC	7 cut(s)	228, 758, 809, 835, 1163, 2243, 2719
PflMI	CCANNNNNTGG	1 cut(s)	2299
Ple19I	CGATCG	1 cut(s)	423
PleI	GAGTC	2 cut(s)	1343, 1822
PpsI	GAGTC	2 cut(s)	1343, 1822
PpuMI	RGGWCCY	3 cut(s)	352, 743, 1479
PscI	ACATGT	1 cut(s)	2040
Psp124BI	GAGCTC	3 cut(s)	145, 204, 327
Psp5II	RGGWCCY	3 cut(s)	352, 743, 1479
Psp6I	CCWGG	3 cut(s)	1435, 1481, 2554
PspEI	GGTNACC	1 cut(s)	524
PspFI	CCCAGC	1 cut(s)	2339
PspGI	CCWGG	3 cut(s)	1435, 1481, 2554
PspPPI	RGGWCCY	3 cut(s)	352, 743, 1479
PsrI	GAACNNNNNNTAC	2 cut(s)	2387, 2419
PstI	CTGCAG	1 cut(s)	402
PsuI	RGATCY	5 cut(s)	300, 490, 699, 2193, 2492
PvuI	CGATCG	1 cut(s)	423
PvuII	CAGCTG	3 cut(s)	574, 1787, 2441
RsaI	GTAC	5 cut(s)	1355, 1538, 1608, 1638, 2187
RsaNI	GTAC	5 cut(s)	1354, 1537, 1607, 1637, 2186
RseI	CAYNNNNRTG	4 cut(s)	693, 1224, 2387, 2411
SacI	GAGCTC	3 cut(s)	145, 204, 327
SaqAI	TTAA	6 cut(s)	780, 1338, 1395, 2307, 2544, 2714
SchI	GAGTC	2 cut(s)	1343, 1822
SduI	GDGCHC	7 cut(s)	139, 145, 204, 327, 624, 1221, 2208
SfaNI	GCATC	5 cut(s)	1003, 1245, 1269, 1591, 1609
SfcI	CTRYAG	3 cut(s)	398, 769, 1671
SinI	GGWCC	8 cut(s)	352, 743, 1031, 1327, 1479, 1577, 2675, 2702
SmaI	CCCGGG	2 cut(s)	748, 2236
SmiMI	CAYNNNNRTG	4 cut(s)	693, 1224, 2387, 2411
Sse9I	AATT	8 cut(s)	534, 544, 781, 1129, 1510, 1919, 2567, 2637
SspMI	CTAG	2 cut(s)	738, 1596
SstI	GAGCTC	3 cut(s)	145, 204, 327
StyI	CCWWGG	1 cut(s)	1982
TaaI	ACNGT	7 cut(s)	110, 172, 530, 777, 2177, 2613, 2710
TaiI	ACGT	5 cut(s)	363, 510, 986, 2014, 2307
TaqI	TCGA	9 cut(s)	231, 327, 348, 378, 423, 498, 833, 1612, 1727
TaqII	GACCGA	2 cut(s)	436, 2379
TasI	AATT	8 cut(s)	534, 544, 781, 1129, 1510, 1919, 2567, 2637
TatI	WGTACW	2 cut(s)	1536, 1606
TauI	GCSGC	4 cut(s)	185, 437, 487, 1093
TfiI	GAWTC	7 cut(s)	228, 758, 809, 835, 1163, 2243, 2719
Tru1I	TTAA	6 cut(s)	780, 1338, 1395, 2307, 2544, 2714
Tru9I	TTAA	6 cut(s)	780, 1338, 1395, 2307, 2544, 2714
TscAI	CASTG	3 cut(s)	2092, 2427, 2715
TseFI	GTSAC	3 cut(s)	62, 1069, 1585
TseI	GCWGC	8 cut(s)	397, 481, 571, 896, 1093, 1295, 2270, 2438
Tsp45I	GTSAC	3 cut(s)	62, 1069, 1585
TspDTI	ATGAA	8 cut(s)	17, 35, 794, 832, 1431, 1568, 2325, 2678
TspGWI	ACGGA	7 cut(s)	483, 529, 641, 1179, 1238, 1555, 2371
TspMI	CCCGGG	2 cut(s)	746, 2234
TspRI	CASTG	3 cut(s)	2092, 2427, 2715
Van91I	CCANNNNNTGG	1 cut(s)	2299
VpaK11BI	GGWCC	8 cut(s)	352, 743, 1031, 1327, 1479, 1577, 2675, 2702
XapI	RAATTY	1 cut(s)	544
XceI	RCATGY	1 cut(s)	2044
XcmI	CCANNNNNNNNNTGG	1 cut(s)	81
XmaI	CCCGGG	2 cut(s)	746, 2234
XmiI	GTMKAC	1 cut(s)	2615
XmnI	GAANNNNTTC	1 cut(s)	344
XspI	CTAG	2 cut(s)	738, 1596
ZraI	GACGTC	1 cut(s)	361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.