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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G63840 AT5G63840 |
| fragaria_vesca | FvH4_1g25070 |
| malus_domestica | MD01G1007800.v1.1 MD01G1007900.v1.1 MD15G1135800.v1.1 |
| prunus_persica | Prupe.4G277800_v2.0.a1 Prupe.4G277800_v2.0.a1 |
| pyrus_communis | pycom15g12240 pycom520g00330 |
| rosa_chinensis | RchiOBHm_Chr2g0122711 RchiOBHm_Chr2g0122721 |
| rosa_laevigata | RLG00000018707 RLG00000018709 |
| rosa_multiflora | Rmu_sc0005370.1_g000002 Rmu_sc0008259.1_g000009 Rmu_sc0008259.1_g000014 Rmu_sc0017734.1_g000006 Rmu_sc0026486.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00031190 Rroxscaffold_2G00121270 Rroxscaffold_2G00121280 Rroxscaffold_4G00297410 Rroxscaffold_4G00317480 Rroxscaffold_4G00325980 Rroxscaffold_7G00197700 Rroxscaffold_7G00199130 |
| rosa_rugosa | Rorug02G0241800 Rorug02G0241800 Rorug02G0241900 Rorug02G0242000 Rorug02G0242100 |
| rosa_samantha | Rh2AG300300 Rh2BG308200 Rh2CG286400 Rh2CG286900 Rh2DG324500 |
| rosa_wichuraiana | Rw2G023850 Rw2G023860 Rw2G024040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 427 |
| AccI | GTMKAC | 1 cut(s) | 320 |
| AccII | CGCG | 4 cut(s) | 150, 456, 458, 540 |
| AclWI | GGATC | 2 cut(s) | 20, 64 |
| AcoI | YGGCCR | 1 cut(s) | 46 |
| AcsI | RAATTY | 1 cut(s) | 594 |
| AfaI | GTAC | 2 cut(s) | 23, 62 |
| AfeI | AGCGCT | 1 cut(s) | 224 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 36 |
| AgsI | TTSAA | 2 cut(s) | 229, 500 |
| AleI | CACNNNNGTG | 1 cut(s) | 402 |
| AluBI | AGCT | 5 cut(s) | 124, 193, 205, 269, 314 |
| AluI | AGCT | 5 cut(s) | 124, 193, 205, 269, 314 |
| Alw21I | GWGCWC | 1 cut(s) | 333 |
| Alw26I | GTCTC | 2 cut(s) | 287, 542 |
| AlwI | GGATC | 2 cut(s) | 20, 64 |
| Ama87I | CYCGRG | 1 cut(s) | 359 |
| Aor51HI | AGCGCT | 1 cut(s) | 224 |
| AoxI | GGCC | 5 cut(s) | 16, 46, 65, 114, 212 |
| ApeKI | GCWGC | 7 cut(s) | 124, 173, 274, 311, 460, 522, 603 |
| ApoI | RAATTY | 1 cut(s) | 594 |
| AspLEI | GCGC | 3 cut(s) | 225, 458, 460 |
| AspS9I | GGNCC | 3 cut(s) | 17, 65, 160 |
| AsuC2I | CCSGG | 3 cut(s) | 50, 129, 158 |
| AsuHPI | GGTGA | 6 cut(s) | 122, 148, 187, 226, 379, 572 |
| AsuII | TTCGAA | 1 cut(s) | 411 |
| AvaI | CYCGRG | 1 cut(s) | 359 |
| AvaII | GGWCC | 1 cut(s) | 160 |
| BbsI | GAAGAC | 2 cut(s) | 276, 425 |
| Bbv12I | GWGCWC | 1 cut(s) | 333 |
| BbvI | GCAGC | 7 cut(s) | 111, 160, 261, 323, 472, 509, 590 |
| BccI | CCATC | 5 cut(s) | 185, 296, 510, 560, 583 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 300, 310, 334, 344 |
| BcnI | CCSGG | 3 cut(s) | 50, 129, 158 |
| BcoDI | GTCTC | 2 cut(s) | 287, 542 |
| BfmI | CTRYAG | 1 cut(s) | 275 |
| BfoI | RGCGCY | 1 cut(s) | 226 |
| BisI | GCNGC | 9 cut(s) | 96, 99, 125, 174, 275, 312, 461, 523, 604 |
| BlsI | GCNGC | 9 cut(s) | 97, 100, 126, 175, 276, 313, 462, 524, 605 |
| Bme1390I | CCNGG | 3 cut(s) | 50, 129, 158 |
| Bme18I | GGWCC | 1 cut(s) | 160 |
| BmeT110I | CYCGRG | 1 cut(s) | 359 |
| BmgT120I | GGNCC | 3 cut(s) | 17, 65, 160 |
| BmiI | GGNNCC | 3 cut(s) | 74, 155, 161 |
| BmrFI | CCNGG | 3 cut(s) | 50, 129, 158 |
| BmsI | GCATC | 1 cut(s) | 71 |
| BpiI | GAAGAC | 2 cut(s) | 276, 425 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 130, 162, 429, 461 |
| Bpu14I | TTCGAA | 1 cut(s) | 411 |
| BpuMI | CCSGG | 3 cut(s) | 50, 129, 158 |
| Bsa29I | ATCGAT | 1 cut(s) | 300 |
| BsaI | GGTCTC | 1 cut(s) | 542 |
| BsaJI | CCNNGG | 2 cut(s) | 68, 397 |
| BsaWI | WCCGGW | 1 cut(s) | 422 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 355, 385 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 36 |
| BseCI | ATCGAT | 1 cut(s) | 300 |
| BseDI | CCNNGG | 2 cut(s) | 68, 397 |
| BseGI | GGATG | 2 cut(s) | 407, 591 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 36 |
| BsePI | GCGCGC | 1 cut(s) | 456 |
| BseX3I | CGGCCG | 1 cut(s) | 46 |
| BseXI | GCAGC | 7 cut(s) | 111, 160, 261, 323, 472, 509, 590 |
| Bsh1236I | CGCG | 4 cut(s) | 150, 456, 458, 540 |
| Bsh1285I | CGRYCG | 5 cut(s) | 49, 211, 291, 300, 327 |
| BshFI | GGCC | 5 cut(s) | 18, 48, 67, 116, 214 |
| BshVI | ATCGAT | 1 cut(s) | 300 |
| BsiEI | CGRYCG | 5 cut(s) | 49, 211, 291, 300, 327 |
| BsiHKAI | GWGCWC | 1 cut(s) | 333 |
| BsiHKCI | CYCGRG | 1 cut(s) | 359 |
| BsiSI | CCGG | 6 cut(s) | 45, 49, 117, 128, 157, 423 |
| BsiWI | CGTACG | 1 cut(s) | 60 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 36 |
| BsmAI | GTCTC | 2 cut(s) | 287, 542 |
| BsmBI | CGTCTC | 1 cut(s) | 287 |
| BsnI | GGCC | 5 cut(s) | 18, 48, 67, 116, 214 |
| Bso31I | GGTCTC | 1 cut(s) | 542 |
| BsoBI | CYCGRG | 1 cut(s) | 359 |
| Bsp119I | TTCGAA | 1 cut(s) | 411 |
| Bsp1286I | GDGCHC | 1 cut(s) | 333 |
| Bsp143I | GATC | 5 cut(s) | 12, 56, 208, 297, 324 |
| Bsp68I | TCGCGA | 1 cut(s) | 540 |
| BspANI | GGCC | 5 cut(s) | 18, 48, 67, 116, 214 |
| BspDI | ATCGAT | 1 cut(s) | 300 |
| BspFNI | CGCG | 4 cut(s) | 150, 456, 458, 540 |
| BspLI | GGNNCC | 3 cut(s) | 74, 155, 161 |
| BspMAI | CTGCAG | 1 cut(s) | 279 |
| BspPI | GGATC | 2 cut(s) | 20, 64 |
| BspT104I | TTCGAA | 1 cut(s) | 411 |
| BspTNI | GGTCTC | 1 cut(s) | 542 |
| BssECI | CCNNGG | 2 cut(s) | 68, 397 |
| BssHII | GCGCGC | 1 cut(s) | 456 |
| BssMI | GATC | 5 cut(s) | 12, 56, 208, 297, 324 |
| Bst4CI | ACNGT | 1 cut(s) | 394 |
| Bst6I | CTCTTC | 1 cut(s) | 408 |
| BstBI | TTCGAA | 1 cut(s) | 411 |
| BstC8I | GCNNGC | 2 cut(s) | 191, 458 |
| BstDSI | CCRYGG | 1 cut(s) | 397 |
| BstEII | GGTNACC | 1 cut(s) | 232 |
| BstF5I | GGATG | 2 cut(s) | 407, 591 |
| BstFNI | CGCG | 4 cut(s) | 150, 456, 458, 540 |
| BstH2I | RGCGCY | 1 cut(s) | 226 |
| BstHHI | GCGC | 3 cut(s) | 225, 458, 460 |
| BstKTI | GATC | 5 cut(s) | 15, 59, 211, 300, 327 |
| BstMAI | GTCTC | 2 cut(s) | 287, 542 |
| BstMBI | GATC | 5 cut(s) | 12, 56, 208, 297, 324 |
| BstMCI | CGRYCG | 5 cut(s) | 49, 211, 291, 300, 327 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 162, 211, 220 |
| BstPI | GGTNACC | 1 cut(s) | 232 |
| BstSCI | CCNGG | 3 cut(s) | 48, 127, 156 |
| BstSFI | CTRYAG | 1 cut(s) | 275 |
| BstUI | CGCG | 4 cut(s) | 150, 456, 458, 540 |
| BstV1I | GCAGC | 7 cut(s) | 111, 160, 261, 323, 472, 509, 590 |
| BstV2I | GAAGAC | 2 cut(s) | 276, 425 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 404 |
| BstZI | CGGCCG | 1 cut(s) | 46 |
| Bsu15I | ATCGAT | 1 cut(s) | 300 |
| BsuRI | GGCC | 5 cut(s) | 18, 48, 67, 116, 214 |
| BsuTUI | ATCGAT | 1 cut(s) | 300 |
| BtgI | CCRYGG | 1 cut(s) | 397 |
| BtsCI | GGATG | 2 cut(s) | 407, 591 |
| BtuMI | TCGCGA | 1 cut(s) | 540 |
| Cac8I | GCNNGC | 2 cut(s) | 191, 458 |
| CfoI | GCGC | 3 cut(s) | 225, 458, 460 |
| Cfr13I | GGNCC | 3 cut(s) | 17, 65, 160 |
| ClaI | ATCGAT | 1 cut(s) | 300 |
| CseI | GACGC | 1 cut(s) | 179 |
| Csp6I | GTAC | 2 cut(s) | 22, 61 |
| CviQI | GTAC | 2 cut(s) | 22, 61 |
| DpnI | GATC | 5 cut(s) | 14, 58, 210, 299, 326 |
| DpnII | GATC | 5 cut(s) | 12, 56, 208, 297, 324 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 427 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 427 |
| EaeI | YGGCCR | 1 cut(s) | 46 |
| EagI | CGGCCG | 1 cut(s) | 46 |
| Eam1104I | CTCTTC | 1 cut(s) | 408 |
| EarI | CTCTTC | 1 cut(s) | 408 |
| EciI | GGCGGA | 1 cut(s) | 152 |
| EclXI | CGGCCG | 1 cut(s) | 46 |
| Eco31I | GGTCTC | 1 cut(s) | 542 |
| Eco47I | GGWCC | 1 cut(s) | 160 |
| Eco47III | AGCGCT | 1 cut(s) | 224 |
| Eco52I | CGGCCG | 1 cut(s) | 46 |
| Eco88I | CYCGRG | 1 cut(s) | 359 |
| Eco91I | GGTNACC | 1 cut(s) | 232 |
| EcoO65I | GGTNACC | 1 cut(s) | 232 |
| Esp3I | CGTCTC | 1 cut(s) | 287 |
| FauI | CCCGC | 4 cut(s) | 94, 125, 143, 599 |
| FblI | GTMKAC | 1 cut(s) | 320 |
| Fnu4HI | GCNGC | 9 cut(s) | 96, 99, 125, 174, 275, 312, 461, 523, 604 |
| FokI | GGATG | 2 cut(s) | 414, 598 |
| Fsp4HI | GCNGC | 9 cut(s) | 96, 99, 125, 174, 275, 312, 461, 523, 604 |
| GlaI | GCGC | 3 cut(s) | 224, 457, 459 |
| GluI | GCNGC | 9 cut(s) | 96, 99, 125, 174, 275, 312, 461, 523, 604 |
| HaeII | RGCGCY | 1 cut(s) | 226 |
| HaeIII | GGCC | 5 cut(s) | 18, 48, 67, 116, 214 |
| HapII | CCGG | 6 cut(s) | 45, 49, 117, 128, 157, 423 |
| HgaI | GACGC | 1 cut(s) | 179 |
| HhaI | GCGC | 3 cut(s) | 225, 458, 460 |
| Hin6I | GCGC | 3 cut(s) | 223, 456, 458 |
| HinP1I | GCGC | 3 cut(s) | 223, 456, 458 |
| HincII | GTYRAC | 1 cut(s) | 321 |
| HindII | GTYRAC | 1 cut(s) | 321 |
| HinfI | GANTC | 3 cut(s) | 384, 428, 542 |
| HpaII | CCGG | 6 cut(s) | 45, 49, 117, 128, 157, 423 |
| HphI | GGTGA | 6 cut(s) | 122, 148, 187, 226, 379, 572 |
| Hpy166II | GTNNAC | 2 cut(s) | 321, 397 |
| Hpy188I | TCNGA | 6 cut(s) | 56, 91, 259, 340, 433, 547 |
| Hpy188III | TCNNGA | 3 cut(s) | 361, 446, 539 |
| Hpy8I | GTNNAC | 2 cut(s) | 321, 397 |
| Hpy99I | CGWCG | 2 cut(s) | 322, 325 |
| HpyAV | CCTTC | 2 cut(s) | 86, 488 |
| HpyCH4III | ACNGT | 1 cut(s) | 394 |
| HpyCH4V | TGCA | 1 cut(s) | 277 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 162, 211, 220 |
| HspAI | GCGC | 3 cut(s) | 223, 456, 458 |
| Kzo9I | GATC | 5 cut(s) | 12, 56, 208, 297, 324 |
| LmnI | GCTCC | 3 cut(s) | 78, 153, 319 |
| LpnPI | CCDG | 6 cut(s) | 58, 62, 130, 141, 170, 436 |
| Lsp1109I | GCAGC | 7 cut(s) | 111, 160, 261, 323, 472, 509, 590 |
| LweI | GCATC | 1 cut(s) | 71 |
| MaeIII | GTNAC | 1 cut(s) | 232 |
| MalI | GATC | 5 cut(s) | 14, 58, 210, 299, 326 |
| MboI | GATC | 5 cut(s) | 12, 56, 208, 297, 324 |
| MboII | GAAGA | 4 cut(s) | 276, 425, 430, 512 |
| MhlI | GDGCHC | 1 cut(s) | 333 |
| MluCI | AATT | 1 cut(s) | 594 |
| MlyI | GAGTC | 1 cut(s) | 437 |
| MmeI | TCCRAC | 2 cut(s) | 34, 363 |
| MnlI | CCTC | 8 cut(s) | 63, 85, 106, 132, 156, 225, 273, 431 |
| MslI | CAYNNNNRTG | 2 cut(s) | 402, 514 |
| MspI | CCGG | 6 cut(s) | 45, 49, 117, 128, 157, 423 |
| MspR9I | CCNGG | 3 cut(s) | 50, 129, 158 |
| MvnI | CGCG | 4 cut(s) | 150, 456, 458, 540 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 162, 211, 220 |
| NciI | CCSGG | 3 cut(s) | 50, 129, 158 |
| NdeII | GATC | 5 cut(s) | 12, 56, 208, 297, 324 |
| NlaIV | GGNNCC | 3 cut(s) | 74, 155, 161 |
| NmeAIII | GCCGAG | 1 cut(s) | 93 |
| NmuCI | GTSAC | 1 cut(s) | 232 |
| NruI | TCGCGA | 1 cut(s) | 540 |
| NspV | TTCGAA | 1 cut(s) | 411 |
| OliI | CACNNNNGTG | 1 cut(s) | 402 |
| PauI | GCGCGC | 1 cut(s) | 456 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 65, 293 |
| PfeI | GAWTC | 2 cut(s) | 384, 542 |
| Pfl23II | CGTACG | 1 cut(s) | 60 |
| PkrI | GCNGC | 9 cut(s) | 97, 100, 126, 175, 276, 313, 462, 524, 605 |
| Ple19I | CGATCG | 3 cut(s) | 211, 300, 327 |
| PleI | GAGTC | 1 cut(s) | 436 |
| PpsI | GAGTC | 1 cut(s) | 436 |
| PspEI | GGTNACC | 1 cut(s) | 232 |
| PspLI | CGTACG | 1 cut(s) | 60 |
| PspN4I | GGNNCC | 3 cut(s) | 74, 155, 161 |
| PspPI | GGNCC | 3 cut(s) | 17, 65, 160 |
| PstI | CTGCAG | 1 cut(s) | 279 |
| PteI | GCGCGC | 1 cut(s) | 456 |
| PvuI | CGATCG | 3 cut(s) | 211, 300, 327 |
| RruI | TCGCGA | 1 cut(s) | 540 |
| RsaI | GTAC | 2 cut(s) | 23, 62 |
| RsaNI | GTAC | 2 cut(s) | 22, 61 |
| RseI | CAYNNNNRTG | 2 cut(s) | 402, 514 |
| SalI | GTCGAC | 1 cut(s) | 319 |
| SatI | GCNGC | 9 cut(s) | 96, 99, 125, 174, 275, 312, 461, 523, 604 |
| Sau3AI | GATC | 5 cut(s) | 12, 56, 208, 297, 324 |
| Sau96I | GGNCC | 3 cut(s) | 17, 65, 160 |
| SchI | GAGTC | 1 cut(s) | 437 |
| ScrFI | CCNGG | 3 cut(s) | 50, 129, 158 |
| SduI | GDGCHC | 1 cut(s) | 333 |
| SfaNI | GCATC | 1 cut(s) | 71 |
| SfcI | CTRYAG | 1 cut(s) | 275 |
| SfuI | TTCGAA | 1 cut(s) | 411 |
| SgrDI | CGTCGACG | 1 cut(s) | 319 |
| SinI | GGWCC | 1 cut(s) | 160 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 402, 514 |
| Sse9I | AATT | 1 cut(s) | 594 |
| StyD4I | CCNGG | 3 cut(s) | 48, 127, 156 |
| TaaI | ACNGT | 1 cut(s) | 394 |
| TaqI | TCGA | 7 cut(s) | 79, 207, 287, 300, 320, 411, 447 |
| TaqII | GACCGA | 1 cut(s) | 305 |
| TasI | AATT | 1 cut(s) | 594 |
| TauI | GCSGC | 2 cut(s) | 98, 101 |
| TfiI | GAWTC | 2 cut(s) | 384, 542 |
| TseFI | GTSAC | 1 cut(s) | 232 |
| TseI | GCWGC | 7 cut(s) | 124, 173, 274, 311, 460, 522, 603 |
| Tsp45I | GTSAC | 1 cut(s) | 232 |
| TspGWI | ACGGA | 3 cut(s) | 306, 414, 526 |
| VpaK11BI | GGWCC | 1 cut(s) | 160 |
| XapI | RAATTY | 1 cut(s) | 594 |
| XmiI | GTMKAC | 1 cut(s) | 320 |