Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0002632

Physical Location & Seq

Genomic Coordinates Reverse (-)

35361292 .. 35367500

Gene Structure 6209 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G024040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2631 bp

ATGAAGAAGACCCAGGCGATGAACAACCTCATTCTCCTCCTTCTCCTCCTCCTCCTCACCTGTCACCTCTCCCCAGTTCTCTCATGGAAAAAAGACGAGTTCCGAAACTGTAACCAAACCCCTTTCTGCAAACGCGCCCGAGCTCGCAACCCCGGCTCATCCTCCCTCACAGCCCAAGACGCCGCCATCTCCGACGGCGAGCTCACTGCCAAGCTCGTCCCCAAGGGAATCGAACAAGAAGAAACAACCCCCGATCAAATCAAGCCCTTGCTTCTCACTCTCTCCGCTTACCAAGACGGGATCTTGCGCCTCAGGATCGATGAGCTCGATCCGCCCCGGAAGCGCTTCGAGGTCCCCGACGTCGTTTTGCCGGAGTTCGAGGGCAAGAAGCTCTGGCTACAGAGGCTTTCGACCGAGACGATCGACGGCGACGGAGCTCCGTCGTCGGTCGTGTTCTTGTCCGACGACTACGAGGCGGTGCTGCGGCACGATCCGTTCGAGGTTTACGTCCGCGAGAAGAGGGGTAATCGTGTAATTTCCGTGAATTCCAATGGCTTATTTGATTTTGAGCAGCTGAAAGAGAAGAAGGGAGAGGGTGAGGATTGGGAAGAGAGGTTTAGAGGGCACACGGACAAGAGGCCCTACGGCCCTCAGTCCATTAGTTTTGATGTGTCCTTTTATGGGGCTGATCATGTTTACGGGATCCCTGAGCGTGCTTCAAGCTTGGCTTTGAAGCCCACTAGAGGTCCCGGGGTTGAGGAATCTGAGCCCTATAGACTGTTTAACTTGGACGTGTTTGAGTATATTCATGATTCCCCATTCGGGCTTTACGGCTCTATTCCATTCATGATTTCCCACGGCAAGCCCCGAGGGACTTCCGGGTTCTTTTGGTTGAATGCTGCTGAAATGCAGATTGATGTTCTTGGGAACGGGTGGGATGCCGAGGCCGGCATTGCTCTCCCTTCGTCGCAGAGTAGGATTGACACGTTTTGGATGAGTGAGGCCGGTATTGTGGATGCTTTCTTTTTCGTGGGACCGGGCCCAAAGGATGTAGCGCGTCAGTATGCGAGTGTGACTGGCACGCCTGCAATGCCGCAGCTTTTTGCTGTGGCGTATCACCAATGTAGGTGGAATTATAGAGACGAGGAGGATGTGGAGCAAGTTGATTCTAAGTTTGATGAGCATGATATTCCGTATGATGTTTTGTGGCTTGATATTGAGCACACAGACGGGAAGAGATATTTTACATGGGATAGGATGCTTTTCCCTCACCCGGAGGAGATGCAGAGGAAGTTGGCTGCTAAGGGTAGGCACATGGTTACTATTGTGGACCCTCATATTAAGCGAGATGACTCGTACTTTTTGCACAGGGAGGCCACAGAAAAAGGCTATTATGTTAAGGATGCCAATGGGAATGATTACGATGGGTGGTGCTGGTCTGGTTCGTCATCATATTTGGATATGTTGAGGCCAGAGGTTAGGTCCTGGTGGGCTACAAAGTTCTCTACTGAAAATTATGTTGGTTCAACTCCCTCCTTGTACATCTGGAATGACATGAATGAGCCTTCTGTCTTCAATGGTCCTGAGGTCACAATGCCTAGAGATGCTGTACATCTAGGAGATGTAGAACACCGGGAGTTACATAACGCCTATGGTTACTACTTTCACATGGCTACAGCAGATGGGCTTGTTCAGCGAGGTGATGGAAGGGATAGGCCATTTGTTTTATCGAGAGCAGTATTTGCTGGAAGTCAAAGGCATGGAGCAGTATGGACAGGAGACAATACAGCTGAATGGGATCACCTCAGGGTTTCATTGTGGGTTCGTTGGTATCAATTAGGAGCCTACTATCCTTTCTTTAGAGGTCATGCTCACCACGAGACCAAAGACGAGAACCATGGTTTATTTGGAGAAAAAAATACTGAACGTATAAGGGAGGCTATACACATCCGTTACATGTTGCTTCCATACTTTTACACATTATTCAGAGAGGCAAACACCAGTGGATTTCCAGTTGCTCGTCCATTGTGGATGGAGTTTCCTTCCGAGGAGGCTACTTTCACAAATGATGAGGCTTTCATGATTGGAAACAGTCTTTTGGTACAAGGGATCTATACAGAGCATGCAAAACATGCTTCAGTTTATTTGCCTGGGAAAGAATCATGGTATGATGTGAAAACTGGAGCAGCTTACAAGGGAGGTAAGACCCATAAGCTGGATGTTAATGAAGAGGGTGTTCCTGCTTTCCAGAGGGCTGGGACTATCATACCAAGGAAAGACCGCTTTCGTCGGAGTTCCACCCAGATGGTGAATGATCCATACACTCTGGTGATAGCACTGAATAGTTCACAAGCAGCTGAAGGTGAACTCTATGTGGATGATGGAAAAAGCTTCGAGTTTCAGCAAGGATCCTATATCCATCGTCGCTTTGTTTTCGCAGATGGGAAGCTTACATCTCTTAATCTGGCACCTGCACAAACCCAATTTTCTTCAGAATGTGTTATTGAGAGGATTATTCTGCAAGGCCTGTCTACGAGGCAAAAGAGTGCGCTAATTGAACCGGCAAATCAAAAGGCTGAGATTGAACGGGCCCACTTCTCCTTTATTCAAGGCAGGGACCATCAGTGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000902 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005975 GO:0005976 GO:0006073 GO:0006464 GO:0006491 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009250 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009653 GO:0009826 GO:0009987 GO:0010035 GO:0010038 GO:0012505 GO:0015926 GO:0016043 GO:0016049 GO:0016051 GO:0016787 GO:0016798 GO:0019538 GO:0030243 GO:0030244 GO:0030587 GO:0031288 GO:0032502 GO:0032989 GO:0033692 GO:0033919 GO:0034637 GO:0034645 GO:0036211 GO:0040007 GO:0042221 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043687 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048589 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0051274 GO:0051703 GO:0051704 GO:0051707 GO:0060560 GO:0071704 GO:0071840 GO:0090599 GO:0090600 GO:0090702 GO:0098542 GO:0099120 GO:1901135 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 ko01100 ko04141 map00510 map01100 map04141

Pfam Domains

Protein Families

DUF5110 Gal_mutarotas_2 Glyco_hydro_31

Protein Analysis

876

Amino Acids

100.16

Weight (kDa)

5.64

Isoelectric Point (pI)

41.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gal_mutarotas_2	PF13802	92 - 306	1.1e-40	Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
Glyco_hydro_31_2nd	PF01055	362 - 606	4e-78	Glycosyl hydrolases family 31 TIM-barrel domain
Glyco_hydro_31_2nd	PF01055	606 - 661	5.5e-16	Glycosyl hydrolases family 31 TIM-barrel domain
Glyco_hydro_31_3rd	PF21365	669 - 756	4.1e-24	Glycosyl hydrolase family 31 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002632)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63840 AT5G63840
fragaria_vesca	FvH4_1g25070
malus_domestica	MD01G1007800.v1.1 MD01G1007900.v1.1 MD15G1135800.v1.1
prunus_persica	Prupe.4G277800_v2.0.a1 Prupe.4G277800_v2.0.a1
pyrus_communis	pycom15g12240 pycom520g00330
rosa_chinensis	RchiOBHm_Chr2g0122711 RchiOBHm_Chr2g0122721
rosa_laevigata	RLG00000018707 RLG00000018709
rosa_multiflora	Rmu_sc0005370.1_g000002 Rmu_sc0008259.1_g000009 Rmu_sc0008259.1_g000014 Rmu_sc0017734.1_g000006 Rmu_sc0026486.1_g000001
rosa_roxburghii	Rroxscaffold_1G00031190 Rroxscaffold_2G00121270 Rroxscaffold_2G00121280 Rroxscaffold_4G00297410 Rroxscaffold_4G00317480 Rroxscaffold_4G00325980 Rroxscaffold_7G00197700 Rroxscaffold_7G00199130
rosa_rugosa	Rorug02G0241800 Rorug02G0241800 Rorug02G0241900 Rorug02G0242000 Rorug02G0242100
rosa_samantha	Rh2AG300300 Rh2BG308200 Rh2CG286400 Rh2CG286900 Rh2DG324500
rosa_wichuraiana	Rw2G023850 Rw2G023860 Rw2G024040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2479
AatII	GACGTC	1 cut(s)	363
Acc36I	ACCTGC	1 cut(s)	2479
AccB1I	GGYRCC	1 cut(s)	2467
AccB7I	CCANNNNNTGG	1 cut(s)	2215
AccI	GTMKAC	1 cut(s)	2531
AccII	CGCG	3 cut(s)	135, 513, 1057
AciI	CCGC	8 cut(s)	183, 285, 332, 476, 484, 511, 1094, 2281
AcsI	RAATTY	1 cut(s)	544
AcuI	CTGAAG	3 cut(s)	2121, 2379, 2475
AcyI	GRCGYC	2 cut(s)	180, 360
AfaI	GTAC	4 cut(s)	1358, 1541, 1611, 2103
AfeI	AGCGCT	1 cut(s)	344
AfiI	CCNNNNNNNGG	5 cut(s)	681, 743, 822, 1273, 2215
AflIII	ACRYGT	3 cut(s)	792, 984, 1956
AgsI	TTSAA	8 cut(s)	720, 733, 895, 1527, 1576, 2558, 2585, 2609
AjiI	CACGTC	1 cut(s)	793
AjnI	CCWGG	3 cut(s)	12, 1484, 2149
AjuI	GAANNNNNNNTTGG	2 cut(s)	1503, 1535
AleI	CACNNNNGTG	1 cut(s)	2327
Alw21I	GWGCWC	5 cut(s)	145, 204, 327, 439, 1224
Alw26I	GTCTC	4 cut(s)	410, 1134, 1773, 1874
Ama87I	CYCGRG	3 cut(s)	138, 749, 867
Aor51HI	AGCGCT	1 cut(s)	344
ApaI	GGGCCC	2 cut(s)	1043, 2593
ApeKI	GCWGC	7 cut(s)	481, 571, 899, 1096, 1298, 2186, 2354
ApoI	RAATTY	1 cut(s)	544
Asp700I	GAANNNNTTC	1 cut(s)	344
AspLEI	GCGC	5 cut(s)	137, 309, 345, 1057, 2551
AsuC2I	CCSGG	8 cut(s)	153, 337, 750, 751, 880, 1038, 1274, 1634
AvaI	CYCGRG	3 cut(s)	138, 749, 867
AvaII	GGWCC	7 cut(s)	352, 746, 1034, 1330, 1482, 1580, 2617
AxyI	CCTNAGG	3 cut(s)	311, 1584, 1805
BaeGI	GKGCMC	3 cut(s)	627, 1043, 2593
BamHI	GGATCC	2 cut(s)	702, 2408
BanI	GGYRCC	1 cut(s)	2467
BanII	GRGCYC	7 cut(s)	145, 204, 327, 439, 771, 1043, 2593
BauI	CACGAG	1 cut(s)	1877
BbsI	GAAGAC	2 cut(s)	14, 1564
Bbv12I	GWGCWC	5 cut(s)	145, 204, 327, 439, 1224
BbvI	GCAGC	7 cut(s)	468, 583, 886, 1108, 1285, 2198, 2366
BceAI	ACGGC	5 cut(s)	211, 442, 661, 847, 874
BcgI	CGANNNNNNTGC	2 cut(s)	188, 222
BciT130I	CCWGG	3 cut(s)	14, 1486, 2151
BclI	TGATCA	1 cut(s)	688
BcnI	CCSGG	8 cut(s)	153, 337, 750, 751, 880, 1038, 1274, 1634
BcoDI	GTCTC	4 cut(s)	410, 1134, 1773, 1874
BfaI	CTAG	3 cut(s)	741, 1599, 1616
BfmI	CTRYAG	3 cut(s)	398, 772, 1674
BfoI	RGCGCY	1 cut(s)	346
BfuAI	ACCTGC	1 cut(s)	2479
Bme18I	GGWCC	7 cut(s)	352, 746, 1034, 1330, 1482, 1580, 2617
BmeT110I	CYCGRG	3 cut(s)	138, 749, 867
BmgBI	CACGTC	1 cut(s)	793
BmrI	ACTGGG	1 cut(s)	68
BmsI	GCATC	6 cut(s)	928, 1006, 1248, 1272, 1393, 1594
BmuI	ACTGGG	1 cut(s)	68
BpiI	GAAGAC	2 cut(s)	14, 1564
BpmI	CTGGAG	1 cut(s)	2202
Bpu10I	CCTNAGC	2 cut(s)	708, 1302
BpuMI	CCSGG	8 cut(s)	153, 337, 750, 751, 880, 1038, 1274, 1634
Bsa29I	ATCGAT	1 cut(s)	318
BsaHI	GRCGYC	2 cut(s)	180, 360
BsaI	GGTCTC	1 cut(s)	1874
Bsc4I	CCNNNNNNNGG	5 cut(s)	681, 743, 822, 1273, 2215
Bse118I	RCCGGY	3 cut(s)	947, 1004, 2560
Bse1I	ACTGG	5 cut(s)	74, 1081, 2001, 2012, 2185
Bse21I	CCTNAGG	3 cut(s)	311, 1584, 1805
Bse3DI	GCAATG	2 cut(s)	951, 1095
BseBI	CCWGG	3 cut(s)	14, 1486, 2151
BseCI	ATCGAT	1 cut(s)	318
BseLI	CCNNNNNNNGG	5 cut(s)	681, 743, 822, 1273, 2215
BseMI	GCAATG	2 cut(s)	951, 1095
BseMII	CTCAG	7 cut(s)	325, 665, 699, 756, 1575, 1819, 2568
BseNI	ACTGG	5 cut(s)	74, 1081, 2001, 2012, 2185
BseRI	GAGGAG	8 cut(s)	26, 35, 38, 41, 44, 1160, 1292, 2063
BseSI	GKGCMC	3 cut(s)	627, 1043, 2593
BseXI	GCAGC	7 cut(s)	468, 583, 886, 1108, 1285, 2198, 2366
BseYI	CCCAGC	1 cut(s)	2255
BsgI	GTGCAG	1 cut(s)	2457
Bsh1236I	CGCG	3 cut(s)	135, 513, 1057
Bsh1285I	CGRYCG	3 cut(s)	414, 423, 450
BshNI	GGYRCC	1 cut(s)	2467
BshVI	ATCGAT	1 cut(s)	318
BsiEI	CGRYCG	3 cut(s)	414, 423, 450
BsiHKAI	GWGCWC	5 cut(s)	145, 204, 327, 439, 1224
BsiHKCI	CYCGRG	3 cut(s)	138, 749, 867
BslFI	GGGAC	6 cut(s)	203, 338, 732, 886, 1047, 2272
BslI	CCNNNNNNNGG	5 cut(s)	681, 743, 822, 1273, 2215
BsmAI	GTCTC	4 cut(s)	410, 1134, 1773, 1874
BsmBI	CGTCTC	2 cut(s)	410, 1134
BsmFI	GGGAC	6 cut(s)	203, 338, 732, 886, 1047, 2272
BsmI	GAATGC	1 cut(s)	901
Bso31I	GGTCTC	1 cut(s)	1874
BsoBI	CYCGRG	3 cut(s)	138, 749, 867
Bsp120I	GGGCCC	2 cut(s)	1039, 2589
Bsp1286I	GDGCHC	9 cut(s)	145, 204, 327, 439, 627, 771, 1043, 1224, 2593
Bsp1407I	TGTACA	2 cut(s)	1539, 1609
Bsp19I	CCATGG	1 cut(s)	1897
BspACI	CCGC	8 cut(s)	183, 285, 332, 476, 484, 511, 1094, 2281
BspCNI	CTCAG	7 cut(s)	324, 664, 700, 757, 1576, 1818, 2569
BspDI	ATCGAT	1 cut(s)	318
BspFNI	CGCG	3 cut(s)	135, 513, 1057
BspHI	TCATGA	3 cut(s)	808, 846, 2079
BspMI	ACCTGC	1 cut(s)	2479
BspT107I	GGYRCC	1 cut(s)	2467
BspTNI	GGTCTC	1 cut(s)	1874
BsrDI	GCAATG	2 cut(s)	951, 1095
BsrFI	RCCGGY	3 cut(s)	947, 1004, 2560
BsrGI	TGTACA	2 cut(s)	1539, 1609
BsrI	ACTGG	5 cut(s)	74, 1081, 2001, 2012, 2185
BssAI	RCCGGY	3 cut(s)	947, 1004, 2560
BssNI	GRCGYC	2 cut(s)	180, 360
BssSI	CACGAG	1 cut(s)	1877
BssT1I	CCWWGG	3 cut(s)	222, 1897, 2270
Bst2BI	CACGAG	1 cut(s)	1877
Bst2UI	CCWGG	3 cut(s)	14, 1486, 2151
Bst4CI	ACNGT	3 cut(s)	110, 780, 2093
Bst6I	CTCTTC	4 cut(s)	512, 603, 1229, 2223
BstACI	GRCGYC	2 cut(s)	180, 360
BstAPI	GCANNNNNTGC	2 cut(s)	1742, 2132
BstAUI	TGTACA	2 cut(s)	1539, 1609
BstC8I	GCNNGC	8 cut(s)	145, 200, 714, 863, 949, 1082, 1086, 2124
BstDEI	CTNAG	9 cut(s)	311, 651, 708, 765, 1170, 1302, 1584, 1805, 2577
BstDSI	CCRYGG	2 cut(s)	856, 1897
BstFNI	CGCG	3 cut(s)	135, 513, 1057
BstH2I	RGCGCY	1 cut(s)	346
BstHHI	GCGC	5 cut(s)	137, 309, 345, 1057, 2551
BstMAI	GTCTC	4 cut(s)	410, 1134, 1773, 1874
BstMCI	CGRYCG	3 cut(s)	414, 423, 450
BstNI	CCWGG	3 cut(s)	14, 1486, 2151
BstNSI	RCATGY	3 cut(s)	1960, 2126, 2135
BstSFI	CTRYAG	3 cut(s)	398, 772, 1674
BstSLI	GKGCMC	3 cut(s)	627, 1043, 2593
BstUI	CGCG	3 cut(s)	135, 513, 1057
BstV1I	GCAGC	7 cut(s)	468, 583, 886, 1108, 1285, 2198, 2366
BstV2I	GAAGAC	2 cut(s)	14, 1564
BstX2I	RGATCY	4 cut(s)	300, 702, 2109, 2408
BstXI	CCANNNNNNTGG	2 cut(s)	2255, 2305
BstYI	RGATCY	4 cut(s)	300, 702, 2109, 2408
Bsu15I	ATCGAT	1 cut(s)	318
Bsu36I	CCTNAGG	3 cut(s)	311, 1584, 1805
BsuTUI	ATCGAT	1 cut(s)	318
BtgI	CCRYGG	2 cut(s)	856, 1897
BtgZI	GCGATG	1 cut(s)	32
BtrI	CACGTC	1 cut(s)	793
BtsI	GCAGTG	1 cut(s)	204
BtsIMutI	CAGTG	4 cut(s)	204, 2008, 2336, 2630
BveI	ACCTGC	1 cut(s)	2479
Cac8I	GCNNGC	8 cut(s)	145, 200, 714, 863, 949, 1082, 1086, 2124
CciI	TCATGA	3 cut(s)	808, 846, 2079
CfoI	GCGC	5 cut(s)	137, 309, 345, 1057, 2551
Cfr10I	RCCGGY	3 cut(s)	947, 1004, 2560
Cfr9I	CCCGGG	1 cut(s)	749
ClaI	ATCGAT	1 cut(s)	318
CseI	GACGC	2 cut(s)	188, 1046
Csp6I	GTAC	4 cut(s)	1357, 1540, 1610, 2102
CspCI	CAANNNNNGTGG	2 cut(s)	1109, 1144
CviQI	GTAC	4 cut(s)	1357, 1540, 1610, 2102
DdeI	CTNAG	9 cut(s)	311, 651, 708, 765, 1170, 1302, 1584, 1805, 2577
Eam1104I	CTCTTC	4 cut(s)	512, 603, 1229, 2223
EarI	CTCTTC	4 cut(s)	512, 603, 1229, 2223
EciI	GGCGGA	1 cut(s)	321
Ecl136II	GAGCTC	4 cut(s)	143, 202, 325, 437
Eco130I	CCWWGG	3 cut(s)	222, 1897, 2270
Eco147I	AGGCCT	1 cut(s)	2526
Eco24I	GRGCYC	7 cut(s)	145, 204, 327, 439, 771, 1043, 2593
Eco31I	GGTCTC	1 cut(s)	1874
Eco47I	GGWCC	7 cut(s)	352, 746, 1034, 1330, 1482, 1580, 2617
Eco47III	AGCGCT	1 cut(s)	344
Eco53kI	GAGCTC	4 cut(s)	143, 202, 325, 437
Eco57I	CTGAAG	3 cut(s)	2121, 2379, 2475
Eco81I	CCTNAGG	3 cut(s)	311, 1584, 1805
Eco88I	CYCGRG	3 cut(s)	138, 749, 867
EcoICRI	GAGCTC	4 cut(s)	143, 202, 325, 437
EcoO109I	RGGNCCY	4 cut(s)	352, 639, 746, 1482
EcoRI	GAATTC	1 cut(s)	544
EcoRII	CCWGG	3 cut(s)	12, 1484, 2149
EcoT14I	CCWWGG	3 cut(s)	222, 1897, 2270
EcoT38I	GRGCYC	7 cut(s)	145, 204, 327, 439, 771, 1043, 2593
ErhI	CCWWGG	3 cut(s)	222, 1897, 2270
Esp3I	CGTCTC	2 cut(s)	410, 1134
FalI	AAGNNNNNCTT	2 cut(s)	712, 744
FaqI	GGGAC	6 cut(s)	203, 338, 732, 886, 1047, 2272
FbaI	TGATCA	1 cut(s)	688
FblI	GTMKAC	1 cut(s)	2531
FriOI	GRGCYC	7 cut(s)	145, 204, 327, 439, 771, 1043, 2593
FspBI	CTAG	3 cut(s)	741, 1599, 1616
GlaI	GCGC	5 cut(s)	136, 308, 344, 1056, 2550
GsaI	CCCAGC	1 cut(s)	2259
GsuI	CTGGAG	1 cut(s)	2202
HaeII	RGCGCY	1 cut(s)	346
HgaI	GACGC	2 cut(s)	188, 1046
HhaI	GCGC	5 cut(s)	137, 309, 345, 1057, 2551
Hin1I	GRCGYC	2 cut(s)	180, 360
Hin6I	GCGC	5 cut(s)	135, 307, 343, 1055, 2549
HinP1I	GCGC	5 cut(s)	135, 307, 343, 1055, 2549
HindIII	AAGCTT	3 cut(s)	721, 2389, 2447
HinfI	GANTC	6 cut(s)	228, 761, 812, 1166, 1352, 2159
Hpy166II	GTNNAC	6 cut(s)	505, 697, 1330, 2348, 2366, 2532
Hpy188I	TCNGA	8 cut(s)	104, 193, 463, 766, 1988, 2047, 2292, 2494
Hpy188III	TCNNGA	8 cut(s)	313, 809, 847, 1546, 1583, 1731, 2080, 2248
Hpy8I	GTNNAC	6 cut(s)	505, 697, 1330, 2348, 2366, 2532
HpyAV	CCTTC	7 cut(s)	50, 580, 972, 1575, 1701, 2052, 2354
HpyCH4III	ACNGT	3 cut(s)	110, 780, 2093
HpyCH4IV	ACGT	5 cut(s)	360, 507, 792, 986, 1927
HpyCH4V	TGCA	8 cut(s)	129, 910, 1088, 1285, 1366, 2126, 2474, 2521
HpyF3I	CTNAG	9 cut(s)	311, 651, 708, 765, 1170, 1302, 1584, 1805, 2577
HpySE526I	ACGT	5 cut(s)	360, 507, 792, 986, 1927
Hsp92I	GRCGYC	2 cut(s)	180, 360
HspAI	GCGC	5 cut(s)	135, 307, 343, 1055, 2549
KroI	GCCGGC	1 cut(s)	947
KroNI	GCCGGC	1 cut(s)	949
Ksp22I	TGATCA	1 cut(s)	688
LmnI	GCTCC	6 cut(s)	434, 442, 1156, 1763, 1841, 2183
Lsp1109I	GCAGC	7 cut(s)	468, 583, 886, 1108, 1285, 2198, 2366
LweI	GCATC	6 cut(s)	928, 1006, 1248, 1272, 1393, 1594
MaeI	CTAG	3 cut(s)	741, 1599, 1616
MaeII	ACGT	5 cut(s)	360, 507, 792, 986, 1927
MaeIII	GTNAC	8 cut(s)	62, 110, 1072, 1318, 1588, 1638, 1655, 1952
MflI	RGATCY	4 cut(s)	300, 702, 2109, 2408
MhlI	GDGCHC	9 cut(s)	145, 204, 327, 439, 627, 771, 1043, 1224, 2593
MluCI	AATT	7 cut(s)	534, 544, 1132, 1513, 1835, 2483, 2553
MlyI	GAGTC	1 cut(s)	1346
MmeI	TCCRAC	3 cut(s)	216, 486, 2270
MroNI	GCCGGC	1 cut(s)	947
MroXI	GAANNNNTTC	1 cut(s)	344
MseI	TTAA	6 cut(s)	783, 1341, 1398, 2223, 2460, 2629
MslI	CAYNNNNRTG	2 cut(s)	2303, 2327
MspA1I	CMGCKG	3 cut(s)	574, 1790, 2357
Mva1269I	GAATGC	1 cut(s)	901
MvaI	CCWGG	3 cut(s)	14, 1486, 2151
MvnI	CGCG	3 cut(s)	135, 513, 1057
NaeI	GCCGGC	1 cut(s)	949
NciI	CCSGG	8 cut(s)	153, 337, 750, 751, 880, 1038, 1274, 1634
NcoI	CCATGG	1 cut(s)	1897
NgoMIV	GCCGGC	1 cut(s)	947
NmeAIII	GCCGAG	1 cut(s)	967
NmuCI	GTSAC	3 cut(s)	62, 1072, 1588
NspI	RCATGY	3 cut(s)	1960, 2126, 2135
OliI	CACNNNNGTG	1 cut(s)	2327
PaeI	GCATGC	1 cut(s)	2126
PagI	TCATGA	3 cut(s)	808, 846, 2079
PaqCI	CACCTGC	1 cut(s)	2479
PceI	AGGCCT	1 cut(s)	2526
PciI	ACATGT	1 cut(s)	1956
PcsI	WCGNNNNNNNCGW	5 cut(s)	324, 354, 416, 495, 504
PctI	GAATGC	1 cut(s)	901
PdiI	GCCGGC	1 cut(s)	949
PdmI	GAANNNNTTC	1 cut(s)	344
PfeI	GAWTC	5 cut(s)	228, 761, 812, 1166, 2159
PflMI	CCANNNNNTGG	1 cut(s)	2215
Ple19I	CGATCG	1 cut(s)	423
PleI	GAGTC	1 cut(s)	1346
PpsI	GAGTC	1 cut(s)	1346
PpuMI	RGGWCCY	3 cut(s)	352, 746, 1482
PscI	ACATGT	1 cut(s)	1956
Psp124BI	GAGCTC	4 cut(s)	145, 204, 327, 439
Psp5II	RGGWCCY	3 cut(s)	352, 746, 1482
Psp6I	CCWGG	3 cut(s)	12, 1484, 2149
PspFI	CCCAGC	1 cut(s)	2255
PspGI	CCWGG	3 cut(s)	12, 1484, 2149
PspOMI	GGGCCC	2 cut(s)	1039, 2589
PspPPI	RGGWCCY	3 cut(s)	352, 746, 1482
PsuI	RGATCY	4 cut(s)	300, 702, 2109, 2408
PvuI	CGATCG	1 cut(s)	423
PvuII	CAGCTG	3 cut(s)	574, 1790, 2357
RsaI	GTAC	4 cut(s)	1358, 1541, 1611, 2103
RsaNI	GTAC	4 cut(s)	1357, 1540, 1610, 2102
RseI	CAYNNNNRTG	2 cut(s)	2303, 2327
SacI	GAGCTC	4 cut(s)	145, 204, 327, 439
SaqAI	TTAA	6 cut(s)	783, 1341, 1398, 2223, 2460, 2629
SchI	GAGTC	1 cut(s)	1346
SduI	GDGCHC	9 cut(s)	145, 204, 327, 439, 627, 771, 1043, 1224, 2593
SfaNI	GCATC	6 cut(s)	928, 1006, 1248, 1272, 1393, 1594
SfcI	CTRYAG	3 cut(s)	398, 772, 1674
SinI	GGWCC	7 cut(s)	352, 746, 1034, 1330, 1482, 1580, 2617
SmaI	CCCGGG	1 cut(s)	751
SmiMI	CAYNNNNRTG	2 cut(s)	2303, 2327
SphI	GCATGC	1 cut(s)	2126
Sse9I	AATT	7 cut(s)	534, 544, 1132, 1513, 1835, 2483, 2553
SseBI	AGGCCT	1 cut(s)	2526
SsiI	CCGC	8 cut(s)	183, 285, 332, 476, 484, 511, 1094, 2281
SspMI	CTAG	3 cut(s)	741, 1599, 1616
SstI	GAGCTC	4 cut(s)	145, 204, 327, 439
StuI	AGGCCT	1 cut(s)	2526
StyI	CCWWGG	3 cut(s)	222, 1897, 2270
TaaI	ACNGT	3 cut(s)	110, 780, 2093
TaiI	ACGT	5 cut(s)	363, 510, 795, 989, 1930
TaqII	GACCGA	2 cut(s)	428, 436
TasI	AATT	7 cut(s)	534, 544, 1132, 1513, 1835, 2483, 2553
TatI	WGTACW	2 cut(s)	1539, 1609
TauI	GCSGC	3 cut(s)	185, 487, 1096
TfiI	GAWTC	5 cut(s)	228, 761, 812, 1166, 2159
Tru1I	TTAA	6 cut(s)	783, 1341, 1398, 2223, 2460, 2629
Tru9I	TTAA	6 cut(s)	783, 1341, 1398, 2223, 2460, 2629
TscAI	CASTG	4 cut(s)	211, 2008, 2343, 2630
TseFI	GTSAC	3 cut(s)	62, 1072, 1588
TseI	GCWGC	7 cut(s)	481, 571, 899, 1096, 1298, 2186, 2354
Tsp45I	GTSAC	3 cut(s)	62, 1072, 1588
TspDTI	ATGAA	8 cut(s)	17, 35, 797, 835, 1571, 1803, 2068, 2241
TspGWI	ACGGA	7 cut(s)	429, 447, 483, 529, 644, 1182, 1940
TspMI	CCCGGG	1 cut(s)	749
TspRI	CASTG	4 cut(s)	211, 2008, 2343, 2630
Van91I	CCANNNNNTGG	1 cut(s)	2215
VpaK11BI	GGWCC	7 cut(s)	352, 746, 1034, 1330, 1482, 1580, 2617
XapI	RAATTY	1 cut(s)	544
XceI	RCATGY	3 cut(s)	1960, 2126, 2135
XcmI	CCANNNNNNNNNTGG	2 cut(s)	81, 1904
XmaI	CCCGGG	1 cut(s)	749
XmiI	GTMKAC	1 cut(s)	2531
XmnI	GAANNNNTTC	1 cut(s)	344
XspI	CTAG	3 cut(s)	741, 1599, 1616
ZraI	GACGTC	1 cut(s)	361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.