Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0003159

Physical Location & Seq

Genomic Coordinates Reverse (-)

14099669 .. 14104307

Gene Structure 4639 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G159400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1080 bp

ATGAAACGTTTCTTTCGACCAGTAGAGAAAGATGGGTCCGCCAAAAAGCCTACTCTTTCATCTTCTTCAGAAAATGGAGAAATTTCAGGGGAGGGCAGCAAGAAAGAGCCACTTAAGTTCATAACGTGGAATGCCAATAGCTTTCTTCTCCGGGTTAAGAAGAACTGGCCTGAGTTCACTAAGTTCATCACGAGCTTTGACCCAGATGTCATTGCAATACAGGAAGTAAGGATGCCTGCTGCTGGTTCAAAGGGTGCACCTAAAAATCCAGGAGAGTTGAAAGATGACACTAGCTCATCACGGGAAGAAAAGCAGATACTAATGCGTGCCTTGTCAAGTCCGCCCTTTGGAGATTATCGTGTTTGGTGGTCTCTTGCAGATTCAAAGTATGCAGGGACTGCATTGTTTGTAAAGAAGTGTTTCCAACCACAAAAAGTATTTTTCAATCTTGACAGAAAAGCTTCAAAGCATGAACCAGATGGCCGGGTCATCTTAGCTGAATTTGAGACCTTTAATTTGTTGAATACATATGCTCCAAACAATGGTTGGAAGGAGGAAGAAAATTCATTCCCAAGGAGACGAAAATGGGATAAAAGGATTTTAGAGTTTGTTCTGCAGTCTTCAGATAAGCCTCTCATATGGTGTGGTGATCTGAATGTTAGCCATGAAGAGATTGATGTGAGTCATCCAGATTTTTTCAGTGCAGCAAAGCTTAATGGTTACGTTCCTCCAGATAAAGAGGATTGTGGACAGCCTGGATTCACCTTGGCTGAGAGGAAGCGTTTTGGTAACATATTGAAAGAGGGAAAGCTAATAGATGCATACCGGTTCCTTCACAAGGAGAAGGACATGGAGCGTGGCTTCTCCTGGTCTGGAAACCCCATAGGAAAGTATCGAGGTAAAAGGATGAGAATAGACTACTTCATTGCTGCAGAAAAACTCAAAGATAGGATTGTTGCATGTGAGATGCATGGGCTGGGGATTGAACTACAAGGGTTCTATGGAAGCGATCATTGTCCAGTCTCCCTTGTGCTTTCTGAAGGACGTGCCAATTCCAAAGAAACTGAATTATCTGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003906 GO:0004518 GO:0004519 GO:0004520 GO:0004527 GO:0004529 GO:0004536 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006284 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008296 GO:0008309 GO:0008311 GO:0008408 GO:0009507 GO:0009536 GO:0009987 GO:0016787 GO:0016788 GO:0016796 GO:0016889 GO:0016894 GO:0016895 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:0090305 GO:0140097 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

360

Amino Acids

40.91

Weight (kDa)

8.95

Isoelectric Point (pI)

42.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003159)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48425
fragaria_vesca	FvH4_5g07080 FvH4_5g07080 FvH4_5g07080
malus_domestica	MD14G1165700.v1.1
prunus_persica	Prupe.5G159400_v2.0.a1
pyrus_communis	pycom14g13820
rosa_chinensis	RchiOBHm_Chr3g0465631 RchiOBHm_Chr7g0191471
rosa_laevigata	RLG00000004446
rosa_multiflora	Rmu_sc0000550.1_g000024 Rmu_sc0002661.1_g000010 Rmu_sc0003226.1_g000026 Rmu_sc0005734.1_g000004 Rmu_sc0022975.1_g000001 Rmu_sc0031859.1_g000001
rosa_roxburghii	Rroxscaffold_157G00438410 Rroxscaffold_2G00098620 Rroxscaffold_3G00263770 Rroxscaffold_5G00347080 Rroxscaffold_5G00349220 Rroxscaffold_7G00194680
rosa_rugosa	Rorug05G0345200 Rorug06G0510500
rosa_samantha	Rh2AG501600 Rh2CG487600 Rh3BG139700 Rh3BG143200 Rh3DG144500 Rh5BG061000 Rh7AG118600 Rh7BG012100 Rh7BG120600 Rh7CG123400 Rh7DG121500
rosa_wichuraiana	Rw2G044070 Rw7G026230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	206
AccB7I	CCANNNNNTGG	1 cut(s)	542
AciI	CCGC	2 cut(s)	39, 341
AclI	AACGTT	1 cut(s)	7
AcoI	YGGCCR	1 cut(s)	481
AcsI	RAATTY	3 cut(s)	81, 500, 562
AcuI	CTGAAG	3 cut(s)	51, 606, 1059
AfiI	CCNNNNNNNGG	4 cut(s)	242, 347, 542, 838
AflII	CTTAAG	1 cut(s)	113
AgeI	ACCGGT	1 cut(s)	825
AgsI	TTSAA	8 cut(s)	249, 280, 384, 445, 465, 523, 799, 986
AjiI	CACGTC	1 cut(s)	1046
AjnI	CCWGG	3 cut(s)	268, 754, 866
AluBI	AGCT	7 cut(s)	141, 195, 294, 461, 497, 712, 811
AluI	AGCT	7 cut(s)	141, 195, 294, 461, 497, 712, 811
Alw21I	GWGCWC	1 cut(s)	259
Alw26I	GTCTC	4 cut(s)	375, 500, 571, 1027
Alw44I	GTGCAC	1 cut(s)	255
AlwNI	CAGNNNCTG	1 cut(s)	398
AoxI	GGCC	2 cut(s)	167, 481
ApaLI	GTGCAC	1 cut(s)	255
ApeKI	GCWGC	4 cut(s)	96, 239, 704, 929
ApoI	RAATTY	3 cut(s)	81, 500, 562
ArsI	GACNNNNNNTTYG	2 cut(s)	499, 531
AsiGI	ACCGGT	1 cut(s)	825
Asp700I	GAANNNNTTC	3 cut(s)	8, 419, 460
AspS9I	GGNCC	1 cut(s)	36
AsuC2I	CCSGG	2 cut(s)	152, 485
AsuHPI	GGTGA	2 cut(s)	659, 754
AvaII	GGWCC	1 cut(s)	36
BaeGI	GKGCMC	1 cut(s)	259
BauI	CACGAG	1 cut(s)	190
BbsI	GAAGAC	1 cut(s)	612
Bbv12I	GWGCWC	1 cut(s)	259
BbvI	GCAGC	4 cut(s)	108, 226, 716, 916
BccI	CCATC	2 cut(s)	26, 473
BciT130I	CCWGG	3 cut(s)	270, 756, 868
BcnI	CCSGG	2 cut(s)	152, 485
BcoDI	GTCTC	4 cut(s)	375, 500, 571, 1027
BfaI	CTAG	1 cut(s)	291
BfmI	CTRYAG	2 cut(s)	614, 930
BfrI	CTTAAG	1 cut(s)	113
BisI	GCNGC	4 cut(s)	97, 240, 705, 930
BlsI	GCNGC	4 cut(s)	98, 241, 706, 931
Bme1390I	CCNGG	5 cut(s)	152, 270, 485, 756, 868
Bme18I	GGWCC	1 cut(s)	36
BmgBI	CACGTC	1 cut(s)	1046
BmgT120I	GGNCC	1 cut(s)	36
BmiI	GGNNCC	2 cut(s)	37, 830
BmrFI	CCNGG	5 cut(s)	152, 270, 485, 756, 868
BmsI	GCATC	3 cut(s)	222, 808, 957
BpiI	GAAGAC	1 cut(s)	612
BpmI	CTGGAG	1 cut(s)	714
BpuMI	CCSGG	2 cut(s)	152, 485
BsaI	GGTCTC	2 cut(s)	375, 500
BsaJI	CCNNGG	2 cut(s)	572, 765
BsaWI	WCCGGW	1 cut(s)	825
BsaXI	ACNNNNNCTCC	2 cut(s)	517, 547
Bsc4I	CCNNNNNNNGG	4 cut(s)	242, 347, 542, 838
Bse118I	RCCGGY	1 cut(s)	825
Bse1I	ACTGG	3 cut(s)	20, 170, 1019
Bse3DI	GCAATG	2 cut(s)	210, 924
BseBI	CCWGG	3 cut(s)	270, 756, 868
BseDI	CCNNGG	2 cut(s)	572, 765
BseGI	GGATG	3 cut(s)	237, 685, 912
BseLI	CCNNNNNNNGG	4 cut(s)	242, 347, 542, 838
BseMI	GCAATG	2 cut(s)	210, 924
BseMII	CTCAG	2 cut(s)	162, 762
BseNI	ACTGG	3 cut(s)	20, 170, 1019
BseSI	GKGCMC	1 cut(s)	259
BseXI	GCAGC	4 cut(s)	108, 226, 716, 916
BseYI	CCCAGC	1 cut(s)	976
BsgI	GTGCAG	1 cut(s)	723
BshFI	GGCC	2 cut(s)	169, 483
BshTI	ACCGGT	1 cut(s)	825
BsiHKAI	GWGCWC	1 cut(s)	259
BsiSI	CCGG	3 cut(s)	151, 484, 826
BslFI	GGGAC	1 cut(s)	409
BslI	CCNNNNNNNGG	4 cut(s)	242, 347, 542, 838
BsmAI	GTCTC	4 cut(s)	375, 500, 571, 1027
BsmBI	CGTCTC	1 cut(s)	571
BsmFI	GGGAC	1 cut(s)	409
BsmI	GAATGC	1 cut(s)	136
BsnI	GGCC	2 cut(s)	169, 483
Bso31I	GGTCTC	2 cut(s)	375, 500
Bsp1286I	GDGCHC	1 cut(s)	259
Bsp143I	GATC	2 cut(s)	649, 1009
BspACI	CCGC	2 cut(s)	39, 341
BspANI	GGCC	2 cut(s)	169, 483
BspCNI	CTCAG	2 cut(s)	163, 763
BspLI	GGNNCC	2 cut(s)	37, 830
BspMAI	CTGCAG	2 cut(s)	618, 934
BspTI	CTTAAG	1 cut(s)	113
BspTNI	GGTCTC	2 cut(s)	375, 500
BsrDI	GCAATG	2 cut(s)	210, 924
BsrFI	RCCGGY	1 cut(s)	825
BsrI	ACTGG	3 cut(s)	20, 170, 1019
BssAI	RCCGGY	1 cut(s)	825
BssECI	CCNNGG	2 cut(s)	572, 765
BssMI	GATC	2 cut(s)	649, 1009
BssSI	CACGAG	1 cut(s)	190
BssT1I	CCWWGG	2 cut(s)	572, 765
Bst2BI	CACGAG	1 cut(s)	190
Bst2UI	CCWGG	3 cut(s)	270, 756, 868
Bst6I	CTCTTC	1 cut(s)	663
BstAFI	CTTAAG	1 cut(s)	113
BstAPI	GCANNNNNTGC	1 cut(s)	398
BstC8I	GCNNGC	2 cut(s)	237, 327
BstDEI	CTNAG	4 cut(s)	171, 180, 493, 771
BstENI	CCTNNNNNAGG	1 cut(s)	836
BstF5I	GGATG	3 cut(s)	237, 685, 912
BstKTI	GATC	2 cut(s)	652, 1012
BstMAI	GTCTC	4 cut(s)	375, 500, 571, 1027
BstMBI	GATC	2 cut(s)	649, 1009
BstMWI	GCNNNNNNNGC	1 cut(s)	398
BstNI	CCWGG	3 cut(s)	270, 756, 868
BstNSI	RCATGY	1 cut(s)	963
BstSCI	CCNGG	5 cut(s)	150, 268, 483, 754, 866
BstSFI	CTRYAG	2 cut(s)	614, 930
BstSLI	GKGCMC	1 cut(s)	259
BstV1I	GCAGC	4 cut(s)	108, 226, 716, 916
BstV2I	GAAGAC	1 cut(s)	612
BsuRI	GGCC	2 cut(s)	169, 483
BtrI	CACGTC	1 cut(s)	1046
BtsCI	GGATG	3 cut(s)	237, 685, 912
BtsIMutI	CAGTG	1 cut(s)	706
Cac8I	GCNNGC	2 cut(s)	237, 327
CaiI	CAGNNNCTG	1 cut(s)	398
Cfr10I	RCCGGY	1 cut(s)	825
Cfr13I	GGNCC	1 cut(s)	36
CspAI	ACCGGT	1 cut(s)	825
CviAII	CATG	5 cut(s)	470, 665, 850, 960, 971
DdeI	CTNAG	4 cut(s)	171, 180, 493, 771
DpnI	GATC	2 cut(s)	651, 1011
DpnII	GATC	2 cut(s)	649, 1009
DrdI	GACNNNNNNGTC	1 cut(s)	206
DseDI	GACNNNNNNGTC	1 cut(s)	206
EaeI	YGGCCR	1 cut(s)	481
Eam1104I	CTCTTC	1 cut(s)	663
EarI	CTCTTC	1 cut(s)	663
EciI	GGCGGA	2 cut(s)	28, 330
Eco130I	CCWWGG	2 cut(s)	572, 765
Eco31I	GGTCTC	2 cut(s)	375, 500
Eco47I	GGWCC	1 cut(s)	36
Eco57I	CTGAAG	3 cut(s)	51, 606, 1059
EcoNI	CCTNNNNNAGG	1 cut(s)	836
EcoRII	CCWGG	3 cut(s)	268, 754, 866
EcoT14I	CCWWGG	2 cut(s)	572, 765
EcoT22I	ATGCAT	2 cut(s)	823, 972
ErhI	CCWWGG	2 cut(s)	572, 765
Esp3I	CGTCTC	1 cut(s)	571
FaeI	CATG	5 cut(s)	473, 668, 853, 963, 974
FalI	AAGNNNNNCTT	2 cut(s)	96, 128
FaqI	GGGAC	1 cut(s)	409
FatI	CATG	5 cut(s)	469, 664, 849, 959, 970
FauNDI	CATATG	2 cut(s)	529, 638
Fnu4HI	GCNGC	4 cut(s)	97, 240, 705, 930
FokI	GGATG	3 cut(s)	244, 672, 919
Fsp4HI	GCNGC	4 cut(s)	97, 240, 705, 930
FspBI	CTAG	1 cut(s)	291
GluI	GCNGC	4 cut(s)	97, 240, 705, 930
GsaI	CCCAGC	1 cut(s)	980
GsuI	CTGGAG	1 cut(s)	714
HaeIII	GGCC	2 cut(s)	169, 483
HapII	CCGG	3 cut(s)	151, 484, 826
Hin1II	CATG	5 cut(s)	473, 668, 853, 963, 974
HindIII	AAGCTT	2 cut(s)	459, 710
HinfI	GANTC	3 cut(s)	380, 682, 759
HpaII	CCGG	3 cut(s)	151, 484, 826
HphI	GGTGA	2 cut(s)	659, 754
Hpy166II	GTNNAC	3 cut(s)	177, 257, 749
Hpy188I	TCNGA	4 cut(s)	70, 625, 654, 1039
Hpy188III	TCNNGA	5 cut(s)	190, 449, 689, 731, 873
Hpy8I	GTNNAC	3 cut(s)	177, 257, 749
HpyAV	CCTTC	4 cut(s)	544, 838, 842, 1034
HpyCH4IV	ACGT	4 cut(s)	7, 125, 723, 1045
HpyF10VI	GCNNNNNNNGC	1 cut(s)	398
HpyF3I	CTNAG	4 cut(s)	171, 180, 493, 771
HpySE526I	ACGT	4 cut(s)	7, 125, 723, 1045
Hsp92II	CATG	5 cut(s)	473, 668, 853, 963, 974
Kzo9I	GATC	2 cut(s)	649, 1009
LmnI	GCTCC	2 cut(s)	538, 853
Lsp1109I	GCAGC	4 cut(s)	108, 226, 716, 916
LweI	GCATC	3 cut(s)	222, 808, 957
MaeI	CTAG	1 cut(s)	291
MaeII	ACGT	4 cut(s)	7, 125, 723, 1045
MaeIII	GTNAC	2 cut(s)	719, 788
MalI	GATC	2 cut(s)	651, 1011
MboI	GATC	2 cut(s)	649, 1009
MboII	GAAGA	8 cut(s)	54, 57, 137, 172, 317, 569, 612, 680
MhlI	GDGCHC	1 cut(s)	259
MluCI	AATT	6 cut(s)	81, 500, 514, 562, 1051, 1067
MlyI	GAGTC	1 cut(s)	691
MmeI	TCCRAC	2 cut(s)	448, 527
MnlI	CCTC	8 cut(s)	85, 547, 642, 733, 738, 768, 796, 890
Mph1103I	ATGCAT	2 cut(s)	823, 972
MroXI	GAANNNNTTC	3 cut(s)	8, 419, 460
MseI	TTAA	4 cut(s)	114, 156, 513, 714
MspCI	CTTAAG	1 cut(s)	113
MspI	CCGG	3 cut(s)	151, 484, 826
MspR9I	CCNGG	5 cut(s)	152, 270, 485, 756, 868
Mva1269I	GAATGC	1 cut(s)	136
MvaI	CCWGG	3 cut(s)	270, 756, 868
MwoI	GCNNNNNNNGC	1 cut(s)	398
NciI	CCSGG	2 cut(s)	152, 485
NdeI	CATATG	2 cut(s)	529, 638
NdeII	GATC	2 cut(s)	649, 1009
NlaIII	CATG	5 cut(s)	473, 668, 853, 963, 974
NlaIV	GGNNCC	2 cut(s)	37, 830
NsiI	ATGCAT	2 cut(s)	823, 972
NspI	RCATGY	1 cut(s)	963
PcsI	WCGNNNNNNNCGW	1 cut(s)	13
PctI	GAATGC	1 cut(s)	136
PdmI	GAANNNNTTC	3 cut(s)	8, 419, 460
PfeI	GAWTC	2 cut(s)	380, 759
PflMI	CCANNNNNTGG	1 cut(s)	542
PfoI	TCCNGGA	1 cut(s)	268
PinAI	ACCGGT	1 cut(s)	825
PkrI	GCNGC	4 cut(s)	98, 241, 706, 931
PleI	GAGTC	1 cut(s)	690
PpsI	GAGTC	1 cut(s)	690
Psp1406I	AACGTT	1 cut(s)	7
Psp6I	CCWGG	3 cut(s)	268, 754, 866
PspFI	CCCAGC	1 cut(s)	976
PspGI	CCWGG	3 cut(s)	268, 754, 866
PspN4I	GGNNCC	2 cut(s)	37, 830
PspPI	GGNCC	1 cut(s)	36
PstI	CTGCAG	2 cut(s)	618, 934
PstNI	CAGNNNCTG	1 cut(s)	398
SaqAI	TTAA	4 cut(s)	114, 156, 513, 714
SatI	GCNGC	4 cut(s)	97, 240, 705, 930
Sau3AI	GATC	2 cut(s)	649, 1009
Sau96I	GGNCC	1 cut(s)	36
SchI	GAGTC	1 cut(s)	691
ScrFI	CCNGG	5 cut(s)	152, 270, 485, 756, 868
SduI	GDGCHC	1 cut(s)	259
SfaNI	GCATC	3 cut(s)	222, 808, 957
SfcI	CTRYAG	2 cut(s)	614, 930
SinI	GGWCC	1 cut(s)	36
SmlI	CTYRAG	1 cut(s)	113
SmoI	CTYRAG	1 cut(s)	113
Sse9I	AATT	6 cut(s)	81, 500, 514, 562, 1051, 1067
SsiI	CCGC	2 cut(s)	39, 341
SspMI	CTAG	1 cut(s)	291
StyD4I	CCNGG	5 cut(s)	150, 268, 483, 754, 866
StyI	CCWWGG	2 cut(s)	572, 765
TaiI	ACGT	4 cut(s)	10, 128, 726, 1048
TaqI	TCGA	2 cut(s)	16, 895
TasI	AATT	6 cut(s)	81, 500, 514, 562, 1051, 1067
TfiI	GAWTC	2 cut(s)	380, 759
Tru1I	TTAA	4 cut(s)	114, 156, 513, 714
Tru9I	TTAA	4 cut(s)	114, 156, 513, 714
TscAI	CASTG	1 cut(s)	706
TseI	GCWGC	4 cut(s)	96, 239, 704, 929
TspDTI	ATGAA	8 cut(s)	17, 48, 109, 175, 486, 555, 681, 913
TspRI	CASTG	1 cut(s)	706
Van91I	CCANNNNNTGG	1 cut(s)	542
Vha464I	CTTAAG	1 cut(s)	113
VneI	GTGCAC	1 cut(s)	255
VpaK11BI	GGWCC	1 cut(s)	36
XagI	CCTNNNNNAGG	1 cut(s)	836
XapI	RAATTY	3 cut(s)	81, 500, 562
XceI	RCATGY	1 cut(s)	963
XcmI	CCANNNNNNNNNTGG	1 cut(s)	543
XmnI	GAANNNNTTC	3 cut(s)	8, 419, 460
XspI	CTAG	1 cut(s)	291
Zsp2I	ATGCAT	2 cut(s)	823, 972

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.