DNA-(apurinic or apyrimidinic site)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48425 |
| fragaria_vesca | FvH4_5g07080 FvH4_5g07080 FvH4_5g07080 |
| malus_domestica | MD14G1165700.v1.1 |
| prunus_persica | Prupe.5G159400_v2.0.a1 |
| pyrus_communis | pycom14g13820 |
| rosa_chinensis | RchiOBHm_Chr3g0465631 RchiOBHm_Chr7g0191471 |
| rosa_laevigata | RLG00000004446 |
| rosa_multiflora | Rmu_sc0000550.1_g000024 Rmu_sc0002661.1_g000010 Rmu_sc0003226.1_g000026 Rmu_sc0005734.1_g000004 Rmu_sc0022975.1_g000001 Rmu_sc0031859.1_g000001 |
| rosa_roxburghii | Rroxscaffold_157G00438410 Rroxscaffold_2G00098620 Rroxscaffold_3G00263770 Rroxscaffold_5G00347080 Rroxscaffold_5G00349220 Rroxscaffold_7G00194680 |
| rosa_rugosa | Rorug05G0345200 Rorug06G0510500 |
| rosa_samantha | Rh2AG501600 Rh2CG487600 Rh3BG139700 Rh3BG143200 Rh3DG144500 Rh5BG061000 Rh7AG118600 Rh7BG012100 Rh7BG120600 Rh7CG123400 Rh7DG121500 |
| rosa_wichuraiana | Rw2G044070 Rw7G026230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AjnI | CCWGG | 1 cut(s) | 92 |
| AluBI | AGCT | 2 cut(s) | 37, 155 |
| AluI | AGCT | 2 cut(s) | 37, 155 |
| ApeKI | GCWGC | 1 cut(s) | 155 |
| BbvI | GCAGC | 1 cut(s) | 142 |
| BciT130I | CCWGG | 1 cut(s) | 94 |
| BfmI | CTRYAG | 1 cut(s) | 156 |
| BisI | GCNGC | 1 cut(s) | 156 |
| BlsI | GCNGC | 1 cut(s) | 157 |
| Bme1390I | CCNGG | 1 cut(s) | 94 |
| BmrFI | CCNGG | 1 cut(s) | 94 |
| BmsI | GCATC | 2 cut(s) | 34, 183 |
| BseBI | CCWGG | 1 cut(s) | 94 |
| BseGI | GGATG | 2 cut(s) | 138, 213 |
| BseXI | GCAGC | 1 cut(s) | 142 |
| BspMAI | CTGCAG | 1 cut(s) | 160 |
| Bst2UI | CCWGG | 1 cut(s) | 94 |
| BstF5I | GGATG | 2 cut(s) | 138, 213 |
| BstNI | CCWGG | 1 cut(s) | 94 |
| BstSCI | CCNGG | 1 cut(s) | 92 |
| BstSFI | CTRYAG | 1 cut(s) | 156 |
| BstV1I | GCAGC | 1 cut(s) | 142 |
| BtsCI | GGATG | 2 cut(s) | 138, 213 |
| CviAII | CATG | 2 cut(s) | 76, 186 |
| CviJI | RGCY | 3 cut(s) | 37, 87, 155 |
| CviKI_1 | RGCY | 3 cut(s) | 37, 87, 155 |
| EcoRII | CCWGG | 1 cut(s) | 92 |
| EcoT22I | ATGCAT | 1 cut(s) | 49 |
| FaeI | CATG | 2 cut(s) | 79, 189 |
| FaiI | YATR | 7 cut(s) | 20, 49, 77, 120, 152, 187, 223 |
| FatI | CATG | 2 cut(s) | 75, 185 |
| Fnu4HI | GCNGC | 1 cut(s) | 156 |
| FokI | GGATG | 2 cut(s) | 145, 220 |
| Fsp4HI | GCNGC | 1 cut(s) | 156 |
| GluI | GCNGC | 1 cut(s) | 156 |
| Hin1II | CATG | 2 cut(s) | 79, 189 |
| Hpy188I | TCNGA | 1 cut(s) | 13 |
| Hpy188III | TCNNGA | 1 cut(s) | 99 |
| HpyAV | CCTTC | 1 cut(s) | 64 |
| HpyCH4V | TGCA | 3 cut(s) | 47, 158, 196 |
| Hsp92II | CATG | 2 cut(s) | 79, 189 |
| LpnPI | CCDG | 4 cut(s) | 13, 79, 84, 106 |
| Lsp1109I | GCAGC | 1 cut(s) | 142 |
| LweI | GCATC | 2 cut(s) | 34, 183 |
| MnlI | CCTC | 3 cut(s) | 73, 116, 129 |
| Mph1103I | ATGCAT | 1 cut(s) | 49 |
| MspR9I | CCNGG | 1 cut(s) | 94 |
| MvaI | CCWGG | 1 cut(s) | 94 |
| NlaIII | CATG | 2 cut(s) | 79, 189 |
| NsiI | ATGCAT | 1 cut(s) | 49 |
| PkrI | GCNGC | 1 cut(s) | 157 |
| Psp6I | CCWGG | 1 cut(s) | 92 |
| PspGI | CCWGG | 1 cut(s) | 92 |
| PstI | CTGCAG | 1 cut(s) | 160 |
| SatI | GCNGC | 1 cut(s) | 156 |
| ScrFI | CCNGG | 1 cut(s) | 94 |
| SetI | ASST | 3 cut(s) | 39, 157, 222 |
| SfaNI | GCATC | 2 cut(s) | 34, 183 |
| SfcI | CTRYAG | 1 cut(s) | 156 |
| SgeI | CNNG | 9 cut(s) | 40, 88, 105, 106, 111, 198, 209, 211, 215 |
| StyD4I | CCNGG | 1 cut(s) | 92 |
| TseI | GCWGC | 1 cut(s) | 155 |
| TspDTI | ATGAA | 2 cut(s) | 139, 174 |
| Zsp2I | ATGCAT | 1 cut(s) | 49 |