Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0006012

Physical Location & Seq

Genomic Coordinates Reverse (-)

14873739 .. 14875879

Gene Structure 2141 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G174700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 912 bp

ATGGAACCCCAATCCCAAACCCAACCCCAACAACAAAACCAGAACCAGAAATCCAAGCCAAACATGAACAAGTCTTATTCGATGAACTCGGACGACTCGCCGCTCCGCTTCCACTCCCCGATCCGATCCGACGCCGGCGACCCGCCCGAAACTCCGCCCTACGAGTCTCCCGAGAACTCGCCAGAGAGGCGGGTGGACAACTCCAAGGCGATCATGGCCGTCGACAAGTTCACCCAGTACTCGCCGCTCCGGCCTCAGAAACCGCCGGAGAATGCTAAGGCGCCGTCTCCTGTGGTGGTGTACAACCGGTCGATGAGGGAGGACATGGCGCCGTCGGTGTCGAAGGTGGGGCCTGTCGTTGGAGCCAACGGCGGCGAAGACGTCGTCAACGGCGTCATTGGAGGTGGGAGATCGAGGGGGATAACTTCGACCCGGCCGAAGAGAGGAGATATGGTGAAGACGGCGGCGCTGGGGTTTAGAGTGAGCGAGGTGGTGCTGTGCTTGATTTCGTTCTCGGTTATGGCTGCTGATAAAACTCAGGGGTGGAGCGGCGACTCCTTCGATCGCTACAAGGAATACAGGTATTGCTTAGCTGTGAATGTTATTGCATTTGTATATGCTGCCTTTCAGGCTTATAATCTATCCTACCATCTAGTCACGCGGAAATATGTGATCCGCCACCATCTTCGTCGCCACTTCGATTTCTTCATGGATCAGGTACTGGCATATCTTCTGATTTCAGCATCATCATCTGCAGCCACTCGGGTTGATGACTGGCAATCAAATTGGGGTAAAGACGAGTTCACGGAGATGGCCACTGCTTCGGTCAGCATGGCCTTCCTGGCTTTTGTTGCCTTTGCACTTAGCTCCCTCATCTCTGGTTACAATCTCTGTACCCATGACTCTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0048037 GO:0051536 GO:0051540 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF588

Protein Analysis

304

Amino Acids

33.66

Weight (kDa)

8.64

Isoelectric Point (pI)

52.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006012)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36330 AT2G36330 AT5G62820
fragaria_vesca	FvH4_5g05230 FvH4_5g05230
malus_domestica	MD06G1175400.v1.1 MD13G1274000.v1.1 MD14G1182200.v1.1
prunus_persica	Prupe.5G174700_v2.0.a1
pyrus_communis	pycom06g15610 pycom14g15110
rosa_chinensis	RchiOBHm_Chr4g0422081 RchiOBHm_Chr7g0193681
rosa_laevigata	RLG00000004252 RLG00000009743
rosa_roxburghii	Rroxscaffold_1G00017200 Rroxscaffold_3G00261910 Rroxscaffold_4G00285190
rosa_rugosa	Rorug07G0011300
rosa_samantha	Rh2AG505200 Rh4BG244400 Rh4CG255200 Rh7AG138000 Rh7BG138200 Rh7CG141900 Rh7DG139300
rosa_wichuraiana	Rw7G011750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	636
AatII	GACGTC	1 cut(s)	384
AccB1I	GGYRCC	2 cut(s)	280, 328
AccBSI	CCGCTC	3 cut(s)	103, 247, 549
AccI	GTMKAC	1 cut(s)	222
AccII	CGCG	1 cut(s)	661
AclWI	GGATC	4 cut(s)	115, 120, 667, 720
AcoI	YGGCCR	3 cut(s)	216, 434, 813
AcyI	GRCGYC	5 cut(s)	132, 281, 329, 381, 393
AfaI	GTAC	4 cut(s)	239, 302, 720, 895
AfiI	CCNNNNNNNGG	2 cut(s)	359, 443
AgeI	ACCGGT	1 cut(s)	306
AjnI	CCWGG	1 cut(s)	840
AloI	GAACNNNNNNTCC	2 cut(s)	35, 67
AluBI	AGCT	2 cut(s)	593, 867
AluI	AGCT	2 cut(s)	593, 867
Alw26I	GTCTC	2 cut(s)	171, 291
AlwI	GGATC	4 cut(s)	115, 120, 667, 720
AlwNI	CAGNNNCTG	1 cut(s)	721
Ama87I	CYCGRG	2 cut(s)	170, 762
AoxI	GGCC	6 cut(s)	216, 251, 350, 434, 813, 834
ApeKI	GCWGC	3 cut(s)	524, 620, 755
ArsI	GACNNNNNNTTYG	2 cut(s)	369, 401
AsiGI	ACCGGT	1 cut(s)	306
AspLEI	GCGC	3 cut(s)	283, 331, 469
AspS9I	GGNCC	1 cut(s)	350
AsuC2I	CCSGG	1 cut(s)	433
AsuHPI	GGTGA	2 cut(s)	223, 466
AvaI	CYCGRG	2 cut(s)	170, 762
BalI	TGGCCA	1 cut(s)	815
BanI	GGYRCC	2 cut(s)	280, 328
BbsI	GAAGAC	2 cut(s)	384, 464
BbvI	GCAGC	3 cut(s)	511, 607, 767
BccI	CCATC	3 cut(s)	657, 690, 805
BceAI	ACGGC	6 cut(s)	203, 268, 316, 385, 406, 477
BciT130I	CCWGG	1 cut(s)	842
BcnI	CCSGG	1 cut(s)	433
BcoDI	GTCTC	2 cut(s)	171, 291
BfaI	CTAG	1 cut(s)	653
BfmI	CTRYAG	1 cut(s)	753
BfoI	RGCGCY	3 cut(s)	284, 332, 470
BglI	GCCNNNNNGGC	4 cut(s)	187, 250, 629, 842
BisI	GCNGC	8 cut(s)	101, 245, 373, 465, 525, 550, 621, 756
BlpI	GCTNAGC	1 cut(s)	589
BlsI	GCNGC	8 cut(s)	102, 246, 374, 466, 526, 551, 622, 757
BmcAI	AGTACT	1 cut(s)	239
Bme1390I	CCNGG	2 cut(s)	433, 842
BmeT110I	CYCGRG	2 cut(s)	170, 762
BmgT120I	GGNCC	1 cut(s)	350
BmiI	GGNNCC	5 cut(s)	6, 282, 330, 351, 364
BmrFI	CCNGG	2 cut(s)	433, 842
BmrI	ACTGGG	1 cut(s)	229
BmsI	GCATC	1 cut(s)	752
BmuI	ACTGGG	1 cut(s)	229
BpiI	GAAGAC	2 cut(s)	384, 464
Bpu10I	CCTNAGC	1 cut(s)	276
Bpu1102I	GCTNAGC	1 cut(s)	589
BpuMI	CCSGG	1 cut(s)	433
BsaHI	GRCGYC	5 cut(s)	132, 281, 329, 381, 393
BsaJI	CCNNGG	1 cut(s)	204
BsaWI	WCCGGW	1 cut(s)	306
BsaXI	ACNNNNNCTCC	2 cut(s)	438, 468
Bsc4I	CCNNNNNNNGG	2 cut(s)	359, 443
Bse118I	RCCGGY	2 cut(s)	134, 306
Bse1I	ACTGG	3 cut(s)	235, 726, 779
BseBI	CCWGG	1 cut(s)	842
BseDI	CCNNGG	1 cut(s)	204
BseLI	CCNNNNNNNGG	2 cut(s)	359, 443
BseMII	CTCAG	2 cut(s)	269, 551
BseNI	ACTGG	3 cut(s)	235, 726, 779
BseRI	GAGGAG	1 cut(s)	459
BseX3I	CGGCCG	1 cut(s)	434
BseXI	GCAGC	3 cut(s)	511, 607, 767
BseYI	CCCAGC	1 cut(s)	469
Bsh1236I	CGCG	1 cut(s)	661
Bsh1285I	CGRYCG	3 cut(s)	311, 437, 565
BshFI	GGCC	6 cut(s)	218, 253, 352, 436, 815, 836
BshNI	GGYRCC	2 cut(s)	280, 328
BshTI	ACCGGT	1 cut(s)	306
BsiEI	CGRYCG	3 cut(s)	311, 437, 565
BsiHKCI	CYCGRG	2 cut(s)	170, 762
BsiSI	CCGG	5 cut(s)	135, 250, 266, 307, 433
BslI	CCNNNNNNNGG	2 cut(s)	359, 443
BsmAI	GTCTC	2 cut(s)	171, 291
BsmBI	CGTCTC	1 cut(s)	291
BsmI	GAATGC	1 cut(s)	277
BsnI	GGCC	6 cut(s)	218, 253, 352, 436, 815, 836
BsoBI	CYCGRG	2 cut(s)	170, 762
Bsp1407I	TGTACA	1 cut(s)	300
Bsp143I	GATC	7 cut(s)	120, 125, 210, 410, 562, 672, 712
Bsp1720I	GCTNAGC	1 cut(s)	589
BspANI	GGCC	6 cut(s)	218, 253, 352, 436, 815, 836
BspCNI	CTCAG	2 cut(s)	268, 550
BspFNI	CGCG	1 cut(s)	661
BspLI	GGNNCC	5 cut(s)	6, 282, 330, 351, 364
BspMAI	CTGCAG	1 cut(s)	757
BspPI	GGATC	4 cut(s)	115, 120, 667, 720
BspT107I	GGYRCC	2 cut(s)	280, 328
BsrBI	CCGCTC	3 cut(s)	103, 247, 549
BsrFI	RCCGGY	2 cut(s)	134, 306
BsrGI	TGTACA	1 cut(s)	300
BsrI	ACTGG	3 cut(s)	235, 726, 779
BssAI	RCCGGY	2 cut(s)	134, 306
BssECI	CCNNGG	1 cut(s)	204
BssMI	GATC	7 cut(s)	120, 125, 210, 410, 562, 672, 712
BssNI	GRCGYC	5 cut(s)	132, 281, 329, 381, 393
BssT1I	CCWWGG	1 cut(s)	204
Bst2UI	CCWGG	1 cut(s)	842
Bst6I	CTCTTC	1 cut(s)	434
BstACI	GRCGYC	5 cut(s)	132, 281, 329, 381, 393
BstAUI	TGTACA	1 cut(s)	300
BstC8I	GCNNGC	1 cut(s)	136
BstDEI	CTNAG	5 cut(s)	255, 276, 537, 589, 863
BstFNI	CGCG	1 cut(s)	661
BstH2I	RGCGCY	3 cut(s)	284, 332, 470
BstHHI	GCGC	3 cut(s)	283, 331, 469
BstKTI	GATC	7 cut(s)	123, 128, 213, 413, 565, 675, 715
BstMAI	GTCTC	2 cut(s)	171, 291
BstMBI	GATC	7 cut(s)	120, 125, 210, 410, 562, 672, 712
BstMCI	CGRYCG	3 cut(s)	311, 437, 565
BstMWI	GCNNNNNNNGC	6 cut(s)	187, 215, 250, 629, 842, 851
BstNI	CCWGG	1 cut(s)	842
BstSCI	CCNGG	2 cut(s)	431, 840
BstSFI	CTRYAG	1 cut(s)	753
BstUI	CGCG	1 cut(s)	661
BstV1I	GCAGC	3 cut(s)	511, 607, 767
BstV2I	GAAGAC	2 cut(s)	384, 464
BstZI	CGGCCG	1 cut(s)	434
BsuRI	GGCC	6 cut(s)	218, 253, 352, 436, 815, 836
BtsI	GCAGTG	1 cut(s)	816
BtsIMutI	CAGTG	1 cut(s)	816
Cac8I	GCNNGC	1 cut(s)	136
CaiI	CAGNNNCTG	1 cut(s)	721
CfoI	GCGC	3 cut(s)	283, 331, 469
Cfr10I	RCCGGY	2 cut(s)	134, 306
Cfr13I	GGNCC	1 cut(s)	350
CseI	GACGC	2 cut(s)	140, 382
Csp6I	GTAC	4 cut(s)	238, 301, 719, 894
CspAI	ACCGGT	1 cut(s)	306
CspCI	CAANNNNNGTGG	2 cut(s)	748, 783
CviAII	CATG	7 cut(s)	64, 214, 325, 709, 832, 899, 909
CviQI	GTAC	4 cut(s)	238, 301, 719, 894
DdeI	CTNAG	5 cut(s)	255, 276, 537, 589, 863
DinI	GGCGCC	2 cut(s)	282, 330
DpnI	GATC	7 cut(s)	122, 127, 212, 412, 564, 674, 714
DpnII	GATC	7 cut(s)	120, 125, 210, 410, 562, 672, 712
EaeI	YGGCCR	3 cut(s)	216, 434, 813
EagI	CGGCCG	1 cut(s)	434
Eam1104I	CTCTTC	1 cut(s)	434
EarI	CTCTTC	1 cut(s)	434
EciI	GGCGGA	2 cut(s)	144, 665
EclXI	CGGCCG	1 cut(s)	434
Eco130I	CCWWGG	1 cut(s)	204
Eco52I	CGGCCG	1 cut(s)	434
Eco88I	CYCGRG	2 cut(s)	170, 762
EcoO109I	RGGNCCY	1 cut(s)	350
EcoRII	CCWGG	1 cut(s)	840
EcoT14I	CCWWGG	1 cut(s)	204
EgeI	GGCGCC	2 cut(s)	282, 330
EheI	GGCGCC	2 cut(s)	282, 330
ErhI	CCWWGG	1 cut(s)	204
Esp3I	CGTCTC	1 cut(s)	291
FaeI	CATG	7 cut(s)	67, 217, 328, 712, 835, 902, 912
FatI	CATG	7 cut(s)	63, 213, 324, 708, 831, 898, 908
FauI	CCCGC	2 cut(s)	150, 183
FblI	GTMKAC	1 cut(s)	222
Fnu4HI	GCNGC	8 cut(s)	101, 245, 373, 465, 525, 550, 621, 756
Fsp4HI	GCNGC	8 cut(s)	101, 245, 373, 465, 525, 550, 621, 756
FspBI	CTAG	1 cut(s)	653
GlaI	GCGC	3 cut(s)	282, 330, 468
GluI	GCNGC	8 cut(s)	101, 245, 373, 465, 525, 550, 621, 756
GsaI	CCCAGC	1 cut(s)	473
HaeII	RGCGCY	3 cut(s)	284, 332, 470
HaeIII	GGCC	6 cut(s)	218, 253, 352, 436, 815, 836
HapII	CCGG	5 cut(s)	135, 250, 266, 307, 433
HgaI	GACGC	2 cut(s)	140, 382
HhaI	GCGC	3 cut(s)	283, 331, 469
Hin1I	GRCGYC	5 cut(s)	132, 281, 329, 381, 393
Hin1II	CATG	7 cut(s)	67, 217, 328, 712, 835, 902, 912
Hin6I	GCGC	3 cut(s)	281, 329, 467
HinP1I	GCGC	3 cut(s)	281, 329, 467
HincII	GTYRAC	2 cut(s)	223, 388
HindII	GTYRAC	2 cut(s)	223, 388
HinfI	GANTC	4 cut(s)	95, 164, 554, 902
HpaII	CCGG	5 cut(s)	135, 250, 266, 307, 433
HphI	GGTGA	2 cut(s)	223, 466
Hpy166II	GTNNAC	6 cut(s)	196, 223, 231, 301, 388, 804
Hpy188I	TCNGA	5 cut(s)	91, 125, 130, 258, 735
Hpy188III	TCNNGA	1 cut(s)	170
Hpy8I	GTNNAC	6 cut(s)	196, 223, 231, 301, 388, 804
Hpy99I	CGWCG	5 cut(s)	134, 224, 337, 386, 693
HpyAV	CCTTC	3 cut(s)	337, 568, 847
HpyCH4IV	ACGT	1 cut(s)	381
HpyCH4V	TGCA	4 cut(s)	608, 755, 860, 908
HpyF10VI	GCNNNNNNNGC	6 cut(s)	187, 215, 250, 629, 842, 851
HpyF3I	CTNAG	5 cut(s)	255, 276, 537, 589, 863
HpySE526I	ACGT	1 cut(s)	381
Hsp92I	GRCGYC	5 cut(s)	132, 281, 329, 381, 393
Hsp92II	CATG	7 cut(s)	67, 217, 328, 712, 835, 902, 912
HspAI	GCGC	3 cut(s)	281, 329, 467
KasI	GGCGCC	2 cut(s)	280, 328
KroI	GCCGGC	1 cut(s)	134
KroNI	GCCGGC	1 cut(s)	136
Kzo9I	GATC	7 cut(s)	120, 125, 210, 410, 562, 672, 712
LmnI	GCTCC	5 cut(s)	108, 252, 362, 546, 872
Lsp1109I	GCAGC	3 cut(s)	511, 607, 767
LweI	GCATC	1 cut(s)	752
MaeI	CTAG	1 cut(s)	653
MaeII	ACGT	1 cut(s)	381
MaeIII	GTNAC	2 cut(s)	655, 881
MalI	GATC	7 cut(s)	122, 127, 212, 412, 564, 674, 714
MbiI	CCGCTC	3 cut(s)	103, 247, 549
MboI	GATC	7 cut(s)	120, 125, 210, 410, 562, 672, 712
MboII	GAAGA	6 cut(s)	389, 451, 469, 677, 697, 722
MlsI	TGGCCA	1 cut(s)	815
MluCI	AATT	1 cut(s)	784
MluNI	TGGCCA	1 cut(s)	815
Mly113I	GGCGCC	2 cut(s)	281, 329
MlyI	GAGTC	4 cut(s)	89, 173, 548, 896
MmeI	TCCRAC	2 cut(s)	153, 340
MnlI	CCTC	9 cut(s)	180, 264, 309, 313, 395, 408, 437, 481, 881
Mox20I	TGGCCA	1 cut(s)	815
MreI	CGCCGGCG	1 cut(s)	134
MroNI	GCCGGC	1 cut(s)	134
MscI	TGGCCA	1 cut(s)	815
MslI	CAYNNNNRTG	1 cut(s)	809
Msp20I	TGGCCA	1 cut(s)	815
MspI	CCGG	5 cut(s)	135, 250, 266, 307, 433
MspR9I	CCNGG	2 cut(s)	433, 842
Mva1269I	GAATGC	1 cut(s)	277
MvaI	CCWGG	1 cut(s)	842
MvnI	CGCG	1 cut(s)	661
MwoI	GCNNNNNNNGC	6 cut(s)	187, 215, 250, 629, 842, 851
NaeI	GCCGGC	1 cut(s)	136
NarI	GGCGCC	2 cut(s)	281, 329
NciI	CCSGG	1 cut(s)	433
NdeII	GATC	7 cut(s)	120, 125, 210, 410, 562, 672, 712
NgoMIV	GCCGGC	1 cut(s)	134
NlaIII	CATG	7 cut(s)	67, 217, 328, 712, 835, 902, 912
NlaIV	GGNNCC	5 cut(s)	6, 282, 330, 351, 364
NmuCI	GTSAC	1 cut(s)	655
PcsI	WCGNNNNNNNCGW	3 cut(s)	168, 390, 434
PctI	GAATGC	1 cut(s)	277
PdiI	GCCGGC	1 cut(s)	136
PflFI	GACNNNGTC	1 cut(s)	383
PinAI	ACCGGT	1 cut(s)	306
PkrI	GCNGC	8 cut(s)	102, 246, 374, 466, 526, 551, 622, 757
Ple19I	CGATCG	1 cut(s)	565
PleI	GAGTC	4 cut(s)	89, 172, 548, 896
PluTI	GGCGCC	2 cut(s)	284, 332
PpsI	GAGTC	4 cut(s)	89, 172, 548, 896
PsiI	TTATAA	1 cut(s)	636
Psp6I	CCWGG	1 cut(s)	840
PspFI	CCCAGC	1 cut(s)	469
PspGI	CCWGG	1 cut(s)	840
PspN4I	GGNNCC	5 cut(s)	6, 282, 330, 351, 364
PspPI	GGNCC	1 cut(s)	350
PstI	CTGCAG	1 cut(s)	757
PstNI	CAGNNNCTG	1 cut(s)	721
PsyI	GACNNNGTC	1 cut(s)	383
PvuI	CGATCG	1 cut(s)	565
RsaI	GTAC	4 cut(s)	239, 302, 720, 895
RsaNI	GTAC	4 cut(s)	238, 301, 719, 894
RseI	CAYNNNNRTG	1 cut(s)	809
SalI	GTCGAC	1 cut(s)	221
SatI	GCNGC	8 cut(s)	101, 245, 373, 465, 525, 550, 621, 756
Sau3AI	GATC	7 cut(s)	120, 125, 210, 410, 562, 672, 712
Sau96I	GGNCC	1 cut(s)	350
ScaI	AGTACT	1 cut(s)	239
SchI	GAGTC	4 cut(s)	89, 173, 548, 896
ScrFI	CCNGG	2 cut(s)	433, 842
SetI	ASST	8 cut(s)	348, 384, 406, 492, 584, 595, 720, 869
SfaNI	GCATC	1 cut(s)	752
SfcI	CTRYAG	1 cut(s)	753
SfoI	GGCGCC	2 cut(s)	282, 330
SgrAI	CRCCGGYG	1 cut(s)	134
SmiMI	CAYNNNNRTG	1 cut(s)	809
Sse9I	AATT	1 cut(s)	784
SspDI	GGCGCC	2 cut(s)	280, 328
SspMI	CTAG	1 cut(s)	653
StyD4I	CCNGG	2 cut(s)	431, 840
StyI	CCWWGG	1 cut(s)	204
TaiI	ACGT	1 cut(s)	384
TaqI	TCGA	8 cut(s)	80, 222, 311, 341, 413, 428, 561, 699
TaqII	GACCGA	1 cut(s)	814
TasI	AATT	1 cut(s)	784
TatI	WGTACW	2 cut(s)	237, 300
TauI	GCSGC	5 cut(s)	103, 247, 375, 467, 552
TscAI	CASTG	1 cut(s)	823
TseFI	GTSAC	1 cut(s)	655
TseI	GCWGC	3 cut(s)	524, 620, 755
Tsp45I	GTSAC	1 cut(s)	655
TspDTI	ATGAA	3 cut(s)	80, 98, 697
TspGWI	ACGGA	1 cut(s)	821
TspRI	CASTG	1 cut(s)	823
Tth111I	GACNNNGTC	1 cut(s)	383
XcmI	CCANNNNNNNNNTGG	1 cut(s)	211
XmiI	GTMKAC	1 cut(s)	222
XspI	CTAG	1 cut(s)	653
ZraI	GACGTC	1 cut(s)	382
ZrmI	AGTACT	1 cut(s)	239

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.