Prupe.6G009200_v2.0.a1

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
724000 .. 727959
3960 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G009200.2

Sequence Viewer

Length: 1314 bp
ATGGACTCAAACACTGAACGGTCTTCCAATGCTCAGAGGGGCTTCAGAGTTCAAGCTCCACTGGTTGACTCTGTATCATGCTATTGCAAAGTAGATGCAAGCTTAAAAACCGTTGCAGGGGCAAGAAAGTTTGTCCCAGGATCAAAACTTTGCATCCAGCCTGATATTAATCCTAATGCACACAGGGGAAAAAATTTACGCAGGGAAAAGACCAGAATCCAGCCACCCCTCCTGCCTGGCCTACCTGATGATCTTGCAATCGCTTGTTTAATCAGAGTCCCTCGCGTTGAACATAGAAAACTCCGTCTAGTTTGCAAAAGATGGTACCGCCTTCTGGCTGGTAACTTCTTTTATTCACTTAGGAAAAGTCTTGGAATGGCAGAAGAGTGGGTTTATGTCATCAAAAGAGAACGTGATGGAAGGATCTCTTGGCATGCTTTTGATCCTACATACCAGCTCTGGCAGCCGCTTCCACCTGTTCCTGGTGAATATTCTGCAGCGCTTGGTTTCGGTTGTGCTGTCCTTAGTGGTTGTCACCTGTACTTATTTGGAGGAAAAGATCCATTGAAGGGATCTATGAGACGGGTTATTTTTTACAGTGCTCGGACAAATAAATGGCACAGGGCACCAGATATGCTTCGGAAACGCCATTTCTTTGGGTCTTGTGTTATTAATAATTGCCTTTATGTAGCTGGTGGGGAGTGTGATGGAATTCAAAGGACTCTTCGTTCTGCTGAAATTTATGATCCTAACAAGAATCGGTGGAGCTTTATTTCAGATATGAGCACAGCTATGGTTCCCTTTATCGGGGTTGTTCATGAAGGAATGTGGTTCCTAAAAGGACTTGGGACACAGCGTGAGGTAATGAGTGAAGCCTATTCTCCCGAAGCTAATACCTGGACCCCCATTAGTGAGGGGATGGTTGCTGACTGGCGCAACCCGAGTATTTCTTTAAATGGGCAGCTCTATGGTCTGGGTTGCCCCGATGGGTGCAAGCTTAAAGTTTATGATAGAGTAACAGATTCGTGGAACAAATTTATAGATAGCAAGCTTCATCTAGGCAGGTCTTTTGCTTTTAAGGCTGCTGCACTTGTTCCCCTTAACGGGAAGCTTTGCATTATTCGTAATAACATGAGCATCAGTTTAGTCGATATTTCAAGTCCGGATAAACCTGTAGAAGGCAACCCTCACCTTTGGGAAAATATTGCTGGTAAAGGTCATTTCAGAACTCTCGTCTCAAATTTATGGTCAACTATAGCGGCCCGAACTGGTTTGAAGAGTCACATTGTACACTGTCAAGTGCTCCAAGCATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

438

Amino Acids

49.17

Weight (kDa)

9.59

Isoelectric Point (pI)

44.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1053
Acc65I GGTACC 1 cut(s) 324
AccB1I GGYRCC 2 cut(s) 324, 625
AccII CGCG 1 cut(s) 285
AccIII TCCGGA 1 cut(s) 1162
AciI CCGC 3 cut(s) 328, 467, 1259
AclWI GGATC 6 cut(s) 148, 431, 437, 554, 580, 740
AcsI RAATTY 5 cut(s) 193, 711, 738, 1034, 1240
AcuI CTGAAG 1 cut(s) 28
AdeI CACNNNGTG 1 cut(s) 857
AfaI GTAC 3 cut(s) 326, 542, 1290
AfeI AGCGCT 1 cut(s) 501
AfiI CCNNNNNNNGG 9 cut(s) 117, 334, 482, 569, 806, 807, 1103, 1104, 1178
AgsI TTSAA 6 cut(s) 53, 290, 568, 716, 1158, 1276
AjnI CCWGG 4 cut(s) 136, 235, 481, 896
AjuI GAANNNNNNNTTGG 2 cut(s) 412, 444
AloI GAACNNNNNNTCC 2 cut(s) 712, 744
Alw21I GWGCWC 3 cut(s) 604, 788, 1305
Alw26I GTCTC 2 cut(s) 574, 1240
AlwI GGATC 6 cut(s) 148, 431, 437, 554, 580, 740
Ama87I CYCGRG 1 cut(s) 940
Aor13HI TCCGGA 1 cut(s) 1162
Aor51HI AGCGCT 1 cut(s) 501
AoxI GGCC 2 cut(s) 238, 1260
ApeKI GCWGC 5 cut(s) 463, 497, 961, 1082, 1085
ApoI RAATTY 5 cut(s) 193, 711, 738, 1034, 1240
ArsI GACNNNNNNTTYG 2 cut(s) 1232, 1264
AseI ATTAAT 2 cut(s) 168, 672
Asp718I GGTACC 1 cut(s) 324
AspLEI GCGC 2 cut(s) 502, 936
AspS9I GGNCC 2 cut(s) 900, 1261
AsuHPI GGTGA 3 cut(s) 497, 527, 1181
AvaI CYCGRG 1 cut(s) 940
AvaII GGWCC 1 cut(s) 900
BaeGI GKGCMC 1 cut(s) 628
BanI GGYRCC 2 cut(s) 324, 625
BbsI GAAGAC 1 cut(s) 15
Bbv12I GWGCWC 3 cut(s) 604, 788, 1305
BbvI GCAGC 5 cut(s) 475, 509, 973, 1069, 1072
BccI CCATC 5 cut(s) 315, 410, 701, 913, 980
BciT130I CCWGG 4 cut(s) 138, 237, 483, 898
BcoDI GTCTC 2 cut(s) 574, 1240
BfaI CTAG 2 cut(s) 308, 1058
BfmI CTRYAG 3 cut(s) 495, 1173, 1254
BfoI RGCGCY 1 cut(s) 503
BfuAI ACCTGC 1 cut(s) 1053
BisI GCNGC 7 cut(s) 464, 467, 498, 962, 1083, 1086, 1260
BlsI GCNGC 7 cut(s) 465, 468, 499, 963, 1084, 1087, 1261
Bme1390I CCNGG 4 cut(s) 138, 237, 483, 898
Bme18I GGWCC 1 cut(s) 900
BmeT110I CYCGRG 1 cut(s) 940
BmgT120I GGNCC 2 cut(s) 900, 1261
BmiI GGNNCC 5 cut(s) 326, 627, 798, 833, 902
BmrFI CCNGG 4 cut(s) 138, 237, 483, 898
BmsI GCATC 3 cut(s) 85, 162, 1146
BpiI GAAGAC 1 cut(s) 15
BsaBI GATNNNNATC 1 cut(s) 168
BsaJI CCNNGG 1 cut(s) 136
BsaWI WCCGGW 1 cut(s) 1162
Bsc4I CCNNNNNNNGG 9 cut(s) 117, 334, 482, 569, 806, 807, 1103, 1104, 1178
Bse1I ACTGG 3 cut(s) 66, 935, 1273
Bse8I GATNNNNATC 1 cut(s) 168
BseAI TCCGGA 1 cut(s) 1162
BseBI CCWGG 4 cut(s) 138, 237, 483, 898
BseDI CCNNGG 1 cut(s) 136
BseGI GGATG 2 cut(s) 153, 924
BseJI GATNNNNATC 1 cut(s) 168
BseLI CCNNNNNNNGG 9 cut(s) 117, 334, 482, 569, 806, 807, 1103, 1104, 1178
BseMII CTCAG 1 cut(s) 47
BseNI ACTGG 3 cut(s) 66, 935, 1273
BseSI GKGCMC 1 cut(s) 628
BseXI GCAGC 5 cut(s) 475, 509, 973, 1069, 1072
BsgI GTGCAG 1 cut(s) 1071
Bsh1236I CGCG 1 cut(s) 285
BshFI GGCC 2 cut(s) 240, 1262
BshNI GGYRCC 2 cut(s) 324, 625
BsiHKAI GWGCWC 3 cut(s) 604, 788, 1305
BsiHKCI CYCGRG 1 cut(s) 940
BsiSI CCGG 1 cut(s) 1163
BslFI GGGAC 3 cut(s) 119, 263, 862
BslI CCNNNNNNNGG 9 cut(s) 117, 334, 482, 569, 806, 807, 1103, 1104, 1178
BsmAI GTCTC 2 cut(s) 574, 1240
BsmBI CGTCTC 2 cut(s) 574, 1240
BsmFI GGGAC 3 cut(s) 119, 263, 862
BsnI GGCC 2 cut(s) 240, 1262
BsoBI CYCGRG 1 cut(s) 940
Bsp1286I GDGCHC 4 cut(s) 604, 628, 788, 1305
Bsp13I TCCGGA 1 cut(s) 1162
Bsp1407I TGTACA 1 cut(s) 1288
Bsp143I GATC 7 cut(s) 140, 250, 423, 442, 559, 572, 745
BspACI CCGC 3 cut(s) 328, 467, 1259
BspANI GGCC 2 cut(s) 240, 1262
BspCNI CTCAG 1 cut(s) 46
BspEI TCCGGA 1 cut(s) 1162
BspFNI CGCG 1 cut(s) 285
BspHI TCATGA 1 cut(s) 817
BspLI GGNNCC 5 cut(s) 326, 627, 798, 833, 902
BspMAI CTGCAG 1 cut(s) 499
BspMI ACCTGC 1 cut(s) 1053
BspPI GGATC 6 cut(s) 148, 431, 437, 554, 580, 740
BspT107I GGYRCC 2 cut(s) 324, 625
BsrGI TGTACA 1 cut(s) 1288
BsrI ACTGG 3 cut(s) 66, 935, 1273
BssECI CCNNGG 1 cut(s) 136
BssMI GATC 7 cut(s) 140, 250, 423, 442, 559, 572, 745
Bst2UI CCWGG 4 cut(s) 138, 237, 483, 898
Bst4CI ACNGT 4 cut(s) 21, 112, 599, 1295
Bst6I CTCTTC 3 cut(s) 378, 729, 1271
BstAUI TGTACA 1 cut(s) 1288
BstC8I GCNNGC 4 cut(s) 100, 435, 995, 1049
BstDEI CTNAG 3 cut(s) 33, 359, 524
BstENI CCTNNNNNAGG 1 cut(s) 1176
BstF5I GGATG 2 cut(s) 153, 924
BstFNI CGCG 1 cut(s) 285
BstH2I RGCGCY 1 cut(s) 503
BstHHI GCGC 2 cut(s) 502, 936
BstKTI GATC 7 cut(s) 143, 253, 426, 445, 562, 575, 748
BstMAI GTCTC 2 cut(s) 574, 1240
BstMBI GATC 7 cut(s) 140, 250, 423, 442, 559, 572, 745
BstMWI GCNNNNNNNGC 2 cut(s) 463, 1079
BstNI CCWGG 4 cut(s) 138, 237, 483, 898
BstNSI RCATGY 1 cut(s) 437
BstSCI CCNGG 4 cut(s) 136, 235, 481, 896
BstSFI CTRYAG 3 cut(s) 495, 1173, 1254
BstSLI GKGCMC 1 cut(s) 628
BstUI CGCG 1 cut(s) 285
BstV1I GCAGC 5 cut(s) 475, 509, 973, 1069, 1072
BstV2I GAAGAC 1 cut(s) 15
BstX2I RGATCY 3 cut(s) 423, 559, 572
BstXI CCANNNNNNTGG 1 cut(s) 656
BstYI RGATCY 3 cut(s) 423, 559, 572
BsuRI GGCC 2 cut(s) 240, 1262
BtsCI GGATG 2 cut(s) 153, 924
BtsIMutI CAGTG 4 cut(s) 12, 59, 604, 1291
BveI ACCTGC 1 cut(s) 1053
Cac8I GCNNGC 4 cut(s) 100, 435, 995, 1049
CciI TCATGA 1 cut(s) 817
CfoI GCGC 2 cut(s) 502, 936
Cfr13I GGNCC 2 cut(s) 900, 1261
Csp6I GTAC 3 cut(s) 325, 541, 1289
CviAII CATG 5 cut(s) 78, 434, 818, 1132, 1311
CviQI GTAC 3 cut(s) 325, 541, 1289
DdeI CTNAG 3 cut(s) 33, 359, 524
DpnI GATC 7 cut(s) 142, 252, 425, 444, 561, 574, 747
DpnII GATC 7 cut(s) 140, 250, 423, 442, 559, 572, 745
DraI TTTAAA 1 cut(s) 954
DraIII CACNNNGTG 1 cut(s) 857
Eam1104I CTCTTC 3 cut(s) 378, 729, 1271
EarI CTCTTC 3 cut(s) 378, 729, 1271
Eco47I GGWCC 1 cut(s) 900
Eco47III AGCGCT 1 cut(s) 501
Eco57I CTGAAG 1 cut(s) 28
Eco88I CYCGRG 1 cut(s) 940
EcoNI CCTNNNNNAGG 1 cut(s) 1176
EcoRI GAATTC 1 cut(s) 711
EcoRII CCWGG 4 cut(s) 136, 235, 481, 896
Esp3I CGTCTC 2 cut(s) 574, 1240
FaeI CATG 5 cut(s) 81, 437, 821, 1135, 1314
FalI AAGNNNNNCTT 2 cut(s) 412, 444
FaqI GGGAC 3 cut(s) 119, 263, 862
FatI CATG 5 cut(s) 77, 433, 817, 1131, 1310
Fnu4HI GCNGC 7 cut(s) 464, 467, 498, 962, 1083, 1086, 1260
FokI GGATG 2 cut(s) 140, 931
Fsp4HI GCNGC 7 cut(s) 464, 467, 498, 962, 1083, 1086, 1260
FspBI CTAG 2 cut(s) 308, 1058
GlaI GCGC 2 cut(s) 501, 935
GluI GCNGC 7 cut(s) 464, 467, 498, 962, 1083, 1086, 1260
HaeII RGCGCY 1 cut(s) 503
HaeIII GGCC 2 cut(s) 240, 1262
HapII CCGG 1 cut(s) 1163
HhaI GCGC 2 cut(s) 502, 936
Hin1II CATG 5 cut(s) 81, 437, 821, 1135, 1314
Hin6I GCGC 2 cut(s) 500, 934
HinP1I GCGC 2 cut(s) 500, 934
HincII GTYRAC 2 cut(s) 67, 1251
HindII GTYRAC 2 cut(s) 67, 1251
HindIII AAGCTT 4 cut(s) 100, 995, 1049, 1109
HinfI GANTC 8 cut(s) 5, 68, 216, 276, 721, 757, 1022, 1279
HpaII CCGG 1 cut(s) 1163
HphI GGTGA 3 cut(s) 497, 527, 1181
Hpy166II GTNNAC 3 cut(s) 67, 1251, 1291
Hpy188I TCNGA 7 cut(s) 36, 47, 275, 606, 642, 778, 1226
Hpy188III TCNNGA 3 cut(s) 818, 884, 1163
Hpy8I GTNNAC 3 cut(s) 67, 1251, 1291
HpyAV CCTTC 5 cut(s) 341, 414, 562, 815, 1172
HpyCH4III ACNGT 4 cut(s) 21, 112, 599, 1295
HpyCH4IV ACGT 1 cut(s) 412
HpyF10VI GCNNNNNNNGC 2 cut(s) 463, 1079
HpyF3I CTNAG 3 cut(s) 33, 359, 524
HpySE526I ACGT 1 cut(s) 412
Hsp92II CATG 5 cut(s) 81, 437, 821, 1135, 1314
HspAI GCGC 2 cut(s) 500, 934
Kpn2I TCCGGA 1 cut(s) 1162
KpnI GGTACC 1 cut(s) 328
Kzo9I GATC 7 cut(s) 140, 250, 423, 442, 559, 572, 745
LmnI GCTCC 3 cut(s) 61, 765, 1308
Lsp1109I GCAGC 5 cut(s) 475, 509, 973, 1069, 1072
LweI GCATC 3 cut(s) 85, 162, 1146
MaeI CTAG 2 cut(s) 308, 1058
MaeII ACGT 1 cut(s) 412
MaeIII GTNAC 4 cut(s) 341, 533, 1015, 1280
MalI GATC 7 cut(s) 142, 252, 425, 444, 561, 574, 747
MboI GATC 7 cut(s) 140, 250, 423, 442, 559, 572, 745
MboII GAAGA 4 cut(s) 15, 395, 716, 1288
MflI RGATCY 3 cut(s) 423, 559, 572
MhlI GDGCHC 4 cut(s) 604, 628, 788, 1305
MluCI AATT 6 cut(s) 193, 676, 711, 738, 1034, 1240
MlyI GAGTC 4 cut(s) 62, 285, 715, 1288
MnlI CCTC 7 cut(s) 30, 239, 291, 545, 853, 907, 1197
MroI TCCGGA 1 cut(s) 1162
MseI TTAA 8 cut(s) 104, 168, 269, 672, 953, 999, 1077, 1101
MslI CAYNNNNRTG 1 cut(s) 791
MspI CCGG 1 cut(s) 1163
MspR9I CCNGG 4 cut(s) 138, 237, 483, 898
MvaI CCWGG 4 cut(s) 138, 237, 483, 898
MvnI CGCG 1 cut(s) 285
MwoI GCNNNNNNNGC 2 cut(s) 463, 1079
NdeII GATC 7 cut(s) 140, 250, 423, 442, 559, 572, 745
NlaIII CATG 5 cut(s) 81, 437, 821, 1135, 1314
NlaIV GGNNCC 5 cut(s) 326, 627, 798, 833, 902
NmuCI GTSAC 2 cut(s) 533, 1280
NspI RCATGY 1 cut(s) 437
PaeI GCATGC 1 cut(s) 437
PagI TCATGA 1 cut(s) 817
PfeI GAWTC 3 cut(s) 216, 757, 1022
PkrI GCNGC 7 cut(s) 465, 468, 499, 963, 1084, 1087, 1261
PleI GAGTC 4 cut(s) 62, 284, 715, 1287
PpsI GAGTC 4 cut(s) 62, 284, 715, 1287
PshBI ATTAAT 2 cut(s) 168, 672
Psp6I CCWGG 4 cut(s) 136, 235, 481, 896
PspGI CCWGG 4 cut(s) 136, 235, 481, 896
PspN4I GGNNCC 5 cut(s) 326, 627, 798, 833, 902
PspPI GGNCC 2 cut(s) 900, 1261
PstI CTGCAG 1 cut(s) 499
PsuI RGATCY 3 cut(s) 423, 559, 572
RsaI GTAC 3 cut(s) 326, 542, 1290
RsaNI GTAC 3 cut(s) 325, 541, 1289
RseI CAYNNNNRTG 1 cut(s) 791
SaqAI TTAA 8 cut(s) 104, 168, 269, 672, 953, 999, 1077, 1101
SatI GCNGC 7 cut(s) 464, 467, 498, 962, 1083, 1086, 1260
Sau3AI GATC 7 cut(s) 140, 250, 423, 442, 559, 572, 745
Sau96I GGNCC 2 cut(s) 900, 1261
SchI GAGTC 4 cut(s) 62, 285, 715, 1288
ScrFI CCNGG 4 cut(s) 138, 237, 483, 898
SduI GDGCHC 4 cut(s) 604, 628, 788, 1305
SfaNI GCATC 3 cut(s) 85, 162, 1146
SfcI CTRYAG 3 cut(s) 495, 1173, 1254
SinI GGWCC 1 cut(s) 900
SmiMI CAYNNNNRTG 1 cut(s) 791
SphI GCATGC 1 cut(s) 437
Sse9I AATT 6 cut(s) 193, 676, 711, 738, 1034, 1240
SsiI CCGC 3 cut(s) 328, 467, 1259
SspI AATATT 2 cut(s) 491, 1204
SspMI CTAG 2 cut(s) 308, 1058
StyD4I CCNGG 4 cut(s) 136, 235, 481, 896
TaaI ACNGT 4 cut(s) 21, 112, 599, 1295
TaiI ACGT 1 cut(s) 415
TaqI TCGA 1 cut(s) 1149
TasI AATT 6 cut(s) 193, 676, 711, 738, 1034, 1240
TatI WGTACW 2 cut(s) 540, 1288
TauI GCSGC 2 cut(s) 469, 1262
TfiI GAWTC 3 cut(s) 216, 757, 1022
Tru1I TTAA 8 cut(s) 104, 168, 269, 672, 953, 999, 1077, 1101
Tru9I TTAA 8 cut(s) 104, 168, 269, 672, 953, 999, 1077, 1101
TscAI CASTG 4 cut(s) 19, 66, 604, 1298
TseFI GTSAC 2 cut(s) 533, 1280
TseI GCWGC 5 cut(s) 463, 497, 961, 1082, 1085
Tsp45I GTSAC 2 cut(s) 533, 1280
TspDTI ATGAA 3 cut(s) 806, 834, 1043
TspGWI ACGGA 1 cut(s) 293
TspRI CASTG 4 cut(s) 19, 66, 604, 1298
VpaK11BI GGWCC 1 cut(s) 900
VspI ATTAAT 2 cut(s) 168, 672
XagI CCTNNNNNAGG 1 cut(s) 1176
XapI RAATTY 5 cut(s) 193, 711, 738, 1034, 1240
XceI RCATGY 1 cut(s) 437
XspI CTAG 2 cut(s) 308, 1058
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.