Prupe.7G240700_v2.0.a1

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
20718503 .. 20721463
2961 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G240700.2

Sequence Viewer

Length: 1287 bp
ATGGACAGAAGGATACAGCCTCCGCTGGTTGATACAACAGCATGTTTATGTAGAGTAGATGCTGGCCTTAAAACTGTTTCTGGAGCAAAAAAGTATGTCCCAGGGGCAAAGCTCTGTCTTCAGCCTGACATTAAACCCTCCATTCATCCAACTAGGAGTAAGCCTTCACGTGGTGACGGTAGCCGGATTCAGTCCCCTCTACTTCCTGGACTTCCAGATGATCTTGCCATTGCTTGCCTAATCAGGGTCCCAAGAGTTGAGCATCGTAAGCTCCGCCTGGTTTGCAAAAGATGGTACCGTCTTTTGGTTGGTAACTTCTTTTACTCCCTCCGTAAGAGCCTTGGCATTGCAGAAGAATGGATATATTTAATTAAGAGAGATCGAGATGGGAAAATCTCCTGGCATGCCTTTGACCCCGTATACCAGCTATGGCAACCCCTTCCTCCTGTCCCTAAGGAATATTCTGAAGCCCTTGGGTTTGGTTGTGCTGTACTCAGTGGCTGTCACCTCTATTTGTTTGGGGGAAAAGACCCGCTAAAAGGATCAATGAGACGAGTCATTTTCTATAGTGCCAGGACCAATAAATGGCACCGTGCCCCAGATATGCTTCGGCGGCGGCATTTTTTTGGCTCATGTGTTATTAATAACTGCTTGTATGTTGCCGGTGGGGAGAATGAGGGGATGCATCGGTCCTTGAGATCAGCTGAAGTCTATGATCCCAACAAGAACAGATGGTCCTTCATTTCAGATATGAGCACTGCAATGGTGCCCTTCATTGGGGTTGTTTATGAAGGCAAATGGTTCTTGAAGGGGTTAGGGTCTCATCGGCAAGTTTTGAGTGAGGTCTACCAACCAGAAAATGACAGCTGGTACTCTGTGTATGACGGAATGGTTGCAGGCTGGAGGAACCCAAGTGCTGCTTTAAATGGGCATCTCTATGCTTTGGACTGCAAAGATGGCTGCAAACTTAGAGTTTATGATGAAGCGACTGATTCTTGGGGCAAGCATATCGACAGCAAGATGCATTTGGGTAATTCTAGGGCTTTGGAGGCAGCTTCCCTTGTTCCCCTGAATGGTAAACTTTGCATCATCCGGAATAATATGAGCATTTCACTGGTTGATGTTTCGAAATCCAGTGATGTTGGTGGAGCAAGTGCTGAACATCTATGGGAAACTATAGCAGGCAGAGGGCAGTTCAGGACCTTGGTCACAAATCTGTGGTCAAGCCTCGCTGGCAGGAACCGCCTGAAAAGTCACATAGTTCACTGCCAGGTTCTTCAAGCCTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

429

Amino Acids

48.17

Weight (kDa)

9.51

Isoelectric Point (pI)

52.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 294
AccB1I GGYRCC 3 cut(s) 294, 588, 766
AccB7I CCANNNNNTGG 1 cut(s) 585
AccI GTMKAC 2 cut(s) 420, 846
AccIII TCCGGA 1 cut(s) 1092
AciI CCGC 6 cut(s) 23, 274, 533, 613, 616, 1243
AclWI GGATC 2 cut(s) 550, 710
AcuI CTGAAG 3 cut(s) 104, 486, 726
AcvI CACGTG 1 cut(s) 170
AdeI CACNNNGTG 1 cut(s) 173
AfaI GTAC 3 cut(s) 296, 492, 872
AfiI CCNNNNNNNGG 8 cut(s) 170, 244, 304, 539, 585, 776, 777, 1073
AgsI TTSAA 2 cut(s) 808, 1280
AjnI CCWGG 6 cut(s) 100, 205, 276, 398, 572, 1269
AloI GAACNNNNNNTCC 2 cut(s) 719, 751
AluBI AGCT 6 cut(s) 112, 271, 427, 704, 867, 1055
AluI AGCT 6 cut(s) 112, 271, 427, 704, 867, 1055
Alw21I GWGCWC 1 cut(s) 758
Alw26I GTCTC 2 cut(s) 544, 825
AlwI GGATC 2 cut(s) 550, 710
AlwNI CAGNNNCTG 1 cut(s) 501
Aor13HI TCCGGA 1 cut(s) 1092
AoxI GGCC 1 cut(s) 64
ApeKI GCWGC 3 cut(s) 917, 960, 1052
ArsI GACNNNNNNTTYG 2 cut(s) 1205, 1237
AseI ATTAAT 1 cut(s) 642
Asp718I GGTACC 1 cut(s) 294
AspS9I GGNCC 5 cut(s) 247, 576, 690, 735, 1200
AsuHPI GGTGA 2 cut(s) 185, 497
AsuII TTCGAA 1 cut(s) 1127
AvaII GGWCC 5 cut(s) 247, 576, 690, 735, 1200
AxyI CCTNAGG 1 cut(s) 453
BaeGI GKGCMC 2 cut(s) 598, 771
BanI GGYRCC 3 cut(s) 294, 588, 766
BbrPI CACGTG 1 cut(s) 170
BbsI GAAGAC 1 cut(s) 110
Bbv12I GWGCWC 1 cut(s) 758
BbvI GCAGC 3 cut(s) 904, 947, 1064
BccI CCATC 4 cut(s) 285, 380, 726, 950
BcgI CGANNNNNNTGC 2 cut(s) 991, 1025
BciT130I CCWGG 6 cut(s) 102, 207, 278, 400, 574, 1271
BciVI GTATCC 1 cut(s) 6
BcoDI GTCTC 2 cut(s) 544, 825
BfaI CTAG 3 cut(s) 153, 1038, 1285
BfmI CTRYAG 2 cut(s) 565, 1176
BfuI GTATCC 1 cut(s) 6
BglI GCCNNNNNGGC 1 cut(s) 1233
BisI GCNGC 5 cut(s) 614, 617, 918, 961, 1053
BlsI GCNGC 5 cut(s) 615, 618, 919, 962, 1054
Bme1390I CCNGG 6 cut(s) 102, 207, 278, 400, 574, 1271
Bme18I GGWCC 5 cut(s) 247, 576, 690, 735, 1200
BmgT120I GGNCC 5 cut(s) 247, 576, 690, 735, 1200
BmiI GGNNCC 7 cut(s) 248, 249, 296, 590, 768, 908, 1241
BmrFI CCNGG 6 cut(s) 102, 207, 278, 400, 574, 1271
BmsI GCATC 7 cut(s) 49, 271, 672, 694, 940, 1011, 1095
BoxI GACNNNNGTC 1 cut(s) 1205
BpiI GAAGAC 1 cut(s) 110
BpmI CTGGAG 2 cut(s) 102, 922
Bpu14I TTCGAA 1 cut(s) 1127
BpuEI CTTGAG 1 cut(s) 715
BsaAI YACGTR 1 cut(s) 170
BsaI GGTCTC 1 cut(s) 825
BsaJI CCNNGG 5 cut(s) 100, 101, 340, 472, 1203
BsaWI WCCGGW 1 cut(s) 1092
Bsc4I CCNNNNNNNGG 8 cut(s) 170, 244, 304, 539, 585, 776, 777, 1073
Bse118I RCCGGY 1 cut(s) 662
Bse1I ACTGG 2 cut(s) 1119, 1134
Bse21I CCTNAGG 1 cut(s) 453
Bse3DI GCAATG 3 cut(s) 228, 345, 768
BseAI TCCGGA 1 cut(s) 1092
BseBI CCWGG 6 cut(s) 102, 207, 278, 400, 574, 1271
BseDI CCNNGG 5 cut(s) 100, 101, 340, 472, 1203
BseGI GGATG 3 cut(s) 145, 687, 1089
BseLI CCNNNNNNNGG 8 cut(s) 170, 244, 304, 539, 585, 776, 777, 1073
BseMI GCAATG 3 cut(s) 228, 345, 768
BseMII CTCAG 1 cut(s) 508
BseNI ACTGG 2 cut(s) 1119, 1134
BseSI GKGCMC 2 cut(s) 598, 771
BseXI GCAGC 3 cut(s) 904, 947, 1064
BshFI GGCC 1 cut(s) 66
BshNI GGYRCC 3 cut(s) 294, 588, 766
BsiHKAI GWGCWC 1 cut(s) 758
BsiSI CCGG 3 cut(s) 184, 663, 1093
BslFI GGGAC 4 cut(s) 83, 178, 233, 434
BslI CCNNNNNNNGG 8 cut(s) 170, 244, 304, 539, 585, 776, 777, 1073
BsmAI GTCTC 2 cut(s) 544, 825
BsmBI CGTCTC 1 cut(s) 544
BsmFI GGGAC 4 cut(s) 83, 178, 233, 434
BsnI GGCC 1 cut(s) 66
Bso31I GGTCTC 1 cut(s) 825
Bsp119I TTCGAA 1 cut(s) 1127
Bsp1286I GDGCHC 3 cut(s) 598, 758, 771
Bsp13I TCCGGA 1 cut(s) 1092
Bsp143I GATC 5 cut(s) 220, 379, 542, 698, 715
BspACI CCGC 6 cut(s) 23, 274, 533, 613, 616, 1243
BspANI GGCC 1 cut(s) 66
BspCNI CTCAG 1 cut(s) 507
BspEI TCCGGA 1 cut(s) 1092
BspLI GGNNCC 7 cut(s) 248, 249, 296, 590, 768, 908, 1241
BspPI GGATC 2 cut(s) 550, 710
BspT104I TTCGAA 1 cut(s) 1127
BspT107I GGYRCC 3 cut(s) 294, 588, 766
BspTNI GGTCTC 1 cut(s) 825
BsrDI GCAATG 3 cut(s) 228, 345, 768
BsrFI RCCGGY 1 cut(s) 662
BsrI ACTGG 2 cut(s) 1119, 1134
BssAI RCCGGY 1 cut(s) 662
BssECI CCNNGG 5 cut(s) 100, 101, 340, 472, 1203
BssMI GATC 5 cut(s) 220, 379, 542, 698, 715
BssNAI GTATAC 1 cut(s) 421
BssT1I CCWWGG 3 cut(s) 340, 472, 1203
Bst1107I GTATAC 1 cut(s) 421
Bst2UI CCWGG 6 cut(s) 102, 207, 278, 400, 574, 1271
Bst4CI ACNGT 4 cut(s) 76, 179, 299, 593
BstBAI YACGTR 1 cut(s) 170
BstBI TTCGAA 1 cut(s) 1127
BstC8I GCNNGC 7 cut(s) 64, 235, 405, 898, 1004, 1183, 1234
BstDEI CTNAG 3 cut(s) 453, 494, 968
BstF5I GGATG 3 cut(s) 145, 687, 1089
BstKTI GATC 5 cut(s) 223, 382, 545, 701, 718
BstMAI GTCTC 2 cut(s) 544, 825
BstMBI GATC 5 cut(s) 220, 379, 542, 698, 715
BstMWI GCNNNNNNNGC 7 cut(s) 268, 282, 613, 957, 1049, 1233, 1242
BstNI CCWGG 6 cut(s) 102, 207, 278, 400, 574, 1271
BstNSI RCATGY 2 cut(s) 45, 407
BstPAI GACNNNNGTC 1 cut(s) 1205
BstSCI CCNGG 6 cut(s) 100, 205, 276, 398, 572, 1269
BstSFI CTRYAG 2 cut(s) 565, 1176
BstSLI GKGCMC 2 cut(s) 598, 771
BstV1I GCAGC 3 cut(s) 904, 947, 1064
BstV2I GAAGAC 1 cut(s) 110
BstZ17I GTATAC 1 cut(s) 421
Bsu36I CCTNAGG 1 cut(s) 453
BsuI GTATCC 1 cut(s) 6
BsuRI GGCC 1 cut(s) 66
BtsCI GGATG 3 cut(s) 145, 687, 1089
BtsI GCAGTG 2 cut(s) 756, 1264
BtsIMutI CAGTG 5 cut(s) 502, 756, 1112, 1141, 1264
Cac8I GCNNGC 7 cut(s) 64, 235, 405, 898, 1004, 1183, 1234
CaiI CAGNNNCTG 1 cut(s) 501
Cfr10I RCCGGY 1 cut(s) 662
Cfr13I GGNCC 5 cut(s) 247, 576, 690, 735, 1200
Csp6I GTAC 3 cut(s) 295, 491, 871
CviAII CATG 3 cut(s) 42, 404, 633
CviQI GTAC 3 cut(s) 295, 491, 871
DdeI CTNAG 3 cut(s) 453, 494, 968
DpnI GATC 5 cut(s) 222, 381, 544, 700, 717
DpnII GATC 5 cut(s) 220, 379, 542, 698, 715
DraI TTTAAA 1 cut(s) 924
DraIII CACNNNGTG 1 cut(s) 173
EciI GGCGGA 1 cut(s) 263
Eco130I CCWWGG 3 cut(s) 340, 472, 1203
Eco31I GGTCTC 1 cut(s) 825
Eco47I GGWCC 5 cut(s) 247, 576, 690, 735, 1200
Eco57I CTGAAG 3 cut(s) 104, 486, 726
Eco72I CACGTG 1 cut(s) 170
Eco81I CCTNAGG 1 cut(s) 453
EcoO109I RGGNCCY 2 cut(s) 247, 1200
EcoRII CCWGG 6 cut(s) 100, 205, 276, 398, 572, 1269
EcoT14I CCWWGG 3 cut(s) 340, 472, 1203
EcoT22I ATGCAT 2 cut(s) 687, 1026
ErhI CCWWGG 3 cut(s) 340, 472, 1203
Esp3I CGTCTC 1 cut(s) 544
FaeI CATG 3 cut(s) 45, 407, 636
FalI AAGNNNNNCTT 2 cut(s) 904, 936
FaqI GGGAC 4 cut(s) 83, 178, 233, 434
FatI CATG 3 cut(s) 41, 403, 632
FauI CCCGC 1 cut(s) 540
FblI GTMKAC 2 cut(s) 420, 846
Fnu4HI GCNGC 5 cut(s) 614, 617, 918, 961, 1053
FokI GGATG 3 cut(s) 132, 694, 1076
Fsp4HI GCNGC 5 cut(s) 614, 617, 918, 961, 1053
FspBI CTAG 3 cut(s) 153, 1038, 1285
GluI GCNGC 5 cut(s) 614, 617, 918, 961, 1053
GsuI CTGGAG 2 cut(s) 102, 922
HaeIII GGCC 1 cut(s) 66
HapII CCGG 3 cut(s) 184, 663, 1093
Hin1II CATG 3 cut(s) 45, 407, 636
HinfI GANTC 3 cut(s) 187, 555, 992
HpaII CCGG 3 cut(s) 184, 663, 1093
HphI GGTGA 2 cut(s) 185, 497
Hpy166II GTNNAC 4 cut(s) 421, 847, 1079, 1264
Hpy188I TCNGA 2 cut(s) 466, 748
Hpy188III TCNNGA 6 cut(s) 81, 215, 383, 805, 1093, 1198
Hpy8I GTNNAC 4 cut(s) 421, 847, 1079, 1264
HpyAV CCTTC 7 cut(s) 3, 174, 449, 748, 781, 785, 802
HpyCH4III ACNGT 4 cut(s) 76, 179, 299, 593
HpyCH4IV ACGT 1 cut(s) 169
HpyCH4V TGCA 9 cut(s) 285, 350, 685, 761, 896, 951, 963, 1024, 1086
HpyF10VI GCNNNNNNNGC 7 cut(s) 268, 282, 613, 957, 1049, 1233, 1242
HpyF3I CTNAG 3 cut(s) 453, 494, 968
HpySE526I ACGT 1 cut(s) 169
Hsp92II CATG 3 cut(s) 45, 407, 636
KflI GGGWCCC 1 cut(s) 247
Kpn2I TCCGGA 1 cut(s) 1092
KpnI GGTACC 1 cut(s) 298
Kzo9I GATC 5 cut(s) 220, 379, 542, 698, 715
LmnI GCTCC 3 cut(s) 83, 276, 1148
Lsp1109I GCAGC 3 cut(s) 904, 947, 1064
LweI GCATC 7 cut(s) 49, 271, 672, 694, 940, 1011, 1095
MaeI CTAG 3 cut(s) 153, 1038, 1285
MaeII ACGT 1 cut(s) 169
MaeIII GTNAC 5 cut(s) 173, 311, 503, 1207, 1253
MalI GATC 5 cut(s) 222, 381, 544, 700, 717
MboI GATC 5 cut(s) 220, 379, 542, 698, 715
MboII GAAGA 3 cut(s) 110, 365, 1268
MhlI GDGCHC 3 cut(s) 598, 758, 771
MluCI AATT 2 cut(s) 369, 1033
MlyI GAGTC 1 cut(s) 564
MmeI TCCRAC 1 cut(s) 173
Mph1103I ATGCAT 2 cut(s) 687, 1026
MroI TCCGGA 1 cut(s) 1092
MseI TTAA 6 cut(s) 69, 132, 368, 372, 642, 923
MslI CAYNNNNRTG 3 cut(s) 46, 761, 936
MspA1I CMGCKG 3 cut(s) 25, 704, 867
MspI CCGG 3 cut(s) 184, 663, 1093
MspR9I CCNGG 6 cut(s) 102, 207, 278, 400, 574, 1271
MvaI CCWGG 6 cut(s) 102, 207, 278, 400, 574, 1271
MwoI GCNNNNNNNGC 7 cut(s) 268, 282, 613, 957, 1049, 1233, 1242
NdeII GATC 5 cut(s) 220, 379, 542, 698, 715
NlaIII CATG 3 cut(s) 45, 407, 636
NlaIV GGNNCC 7 cut(s) 248, 249, 296, 590, 768, 908, 1241
NmuCI GTSAC 4 cut(s) 173, 503, 1207, 1253
NsiI ATGCAT 2 cut(s) 687, 1026
NspI RCATGY 2 cut(s) 45, 407
NspV TTCGAA 1 cut(s) 1127
PacI TTAATTAA 1 cut(s) 372
PaeI GCATGC 1 cut(s) 407
PasI CCCWGGG 1 cut(s) 101
PfeI GAWTC 2 cut(s) 187, 992
PflMI CCANNNNNTGG 1 cut(s) 585
PfoI TCCNGGA 1 cut(s) 205
PkrI GCNGC 5 cut(s) 615, 618, 919, 962, 1054
PleI GAGTC 1 cut(s) 563
PmaCI CACGTG 1 cut(s) 170
PmlI CACGTG 1 cut(s) 170
PpsI GAGTC 1 cut(s) 563
Ppu21I YACGTR 1 cut(s) 170
PpuMI RGGWCCY 2 cut(s) 247, 1200
PshAI GACNNNNGTC 1 cut(s) 1205
PshBI ATTAAT 1 cut(s) 642
Psp5II RGGWCCY 2 cut(s) 247, 1200
Psp6I CCWGG 6 cut(s) 100, 205, 276, 398, 572, 1269
PspCI CACGTG 1 cut(s) 170
PspGI CCWGG 6 cut(s) 100, 205, 276, 398, 572, 1269
PspN4I GGNNCC 7 cut(s) 248, 249, 296, 590, 768, 908, 1241
PspPI GGNCC 5 cut(s) 247, 576, 690, 735, 1200
PspPPI RGGWCCY 2 cut(s) 247, 1200
PstNI CAGNNNCTG 1 cut(s) 501
PvuII CAGCTG 2 cut(s) 704, 867
RsaI GTAC 3 cut(s) 296, 492, 872
RsaNI GTAC 3 cut(s) 295, 491, 871
RseI CAYNNNNRTG 3 cut(s) 46, 761, 936
SaqAI TTAA 6 cut(s) 69, 132, 368, 372, 642, 923
SatI GCNGC 5 cut(s) 614, 617, 918, 961, 1053
Sau3AI GATC 5 cut(s) 220, 379, 542, 698, 715
Sau96I GGNCC 5 cut(s) 247, 576, 690, 735, 1200
SchI GAGTC 1 cut(s) 564
ScrFI CCNGG 6 cut(s) 102, 207, 278, 400, 574, 1271
SduI GDGCHC 3 cut(s) 598, 758, 771
SfaNI GCATC 7 cut(s) 49, 271, 672, 694, 940, 1011, 1095
SfcI CTRYAG 2 cut(s) 565, 1176
SfuI TTCGAA 1 cut(s) 1127
SinI GGWCC 5 cut(s) 247, 576, 690, 735, 1200
SmiMI CAYNNNNRTG 3 cut(s) 46, 761, 936
SmlI CTYRAG 1 cut(s) 694
SmoI CTYRAG 1 cut(s) 694
SphI GCATGC 1 cut(s) 407
Sse9I AATT 2 cut(s) 369, 1033
SsiI CCGC 6 cut(s) 23, 274, 533, 613, 616, 1243
SspI AATATT 1 cut(s) 461
SspMI CTAG 3 cut(s) 153, 1038, 1285
StyD4I CCNGG 6 cut(s) 100, 205, 276, 398, 572, 1269
StyI CCWWGG 3 cut(s) 340, 472, 1203
TaaI ACNGT 4 cut(s) 76, 179, 299, 593
TaiI ACGT 1 cut(s) 172
TaqI TCGA 3 cut(s) 382, 1011, 1127
TaqII GACCGA 1 cut(s) 678
TasI AATT 2 cut(s) 369, 1033
TatI WGTACW 1 cut(s) 490
TauI GCSGC 2 cut(s) 616, 619
TfiI GAWTC 2 cut(s) 187, 992
Tru1I TTAA 6 cut(s) 69, 132, 368, 372, 642, 923
Tru9I TTAA 6 cut(s) 69, 132, 368, 372, 642, 923
TscAI CASTG 5 cut(s) 502, 763, 1119, 1141, 1271
TseFI GTSAC 4 cut(s) 173, 503, 1207, 1253
TseI GCWGC 3 cut(s) 917, 960, 1052
Tsp45I GTSAC 4 cut(s) 173, 503, 1207, 1253
TspDTI ATGAA 5 cut(s) 134, 730, 763, 804, 996
TspGWI ACGGA 2 cut(s) 320, 900
TspRI CASTG 5 cut(s) 502, 763, 1119, 1141, 1271
Van91I CCANNNNNTGG 1 cut(s) 585
VpaK11BI GGWCC 5 cut(s) 247, 576, 690, 735, 1200
VspI ATTAAT 1 cut(s) 642
XceI RCATGY 2 cut(s) 45, 407
XmiI GTMKAC 2 cut(s) 420, 846
XspI CTAG 3 cut(s) 153, 1038, 1285
Zsp2I ATGCAT 2 cut(s) 687, 1026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.