Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G06720 AT5G06730 |
| fragaria_vesca | FvH4_3g44360 |
| malus_domestica | MD03G1014200.v1.1 MD03G1014400.v1.1 MD11G1015300.v1.1 MD12G1056000.v1.1 |
| prunus_persica | Prupe.6G013500_v2.0.a1 Prupe.6G013600_v2.0.a1 Prupe.7G079100_v2.0.a1 |
| pyrus_communis | pycom03g01180 pycom11g01070 pycom12g04890 |
| rosa_chinensis | RchiOBHm_Chr5g0054001 RchiOBHm_Chr5g0080751 RchiOBHm_Chr5g0080861 RchiOBHm_Chr5g0080911 |
| rosa_laevigata | RLG00000036891 RLG00000036897 |
| rosa_multiflora | Rmu_sc0003177.1_g000004 Rmu_sc0003177.1_g000020 |
| rosa_roxburghii | Rroxscaffold_1G00002590 |
| rosa_rugosa | Rorug05G0472000 |
| rosa_samantha | Rh5AG525400 Rh5BG547400 Rh5BG547900 Rh5CG570900 Rh5CG571400 Rh5DG557700 |
| rosa_wichuraiana | Rw5G048710 Rw5G048720 Rw5G049270 Rw5G049300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 206 |
| Acc65I | GGTACC | 1 cut(s) | 467 |
| AccB1I | GGYRCC | 1 cut(s) | 467 |
| AccII | CGCG | 2 cut(s) | 739, 786 |
| AciI | CCGC | 6 cut(s) | 583, 699, 719, 786, 825, 850 |
| AclWI | GGATC | 1 cut(s) | 810 |
| AcsI | RAATTY | 2 cut(s) | 61, 518 |
| AfaI | GTAC | 3 cut(s) | 469, 617, 712 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 418, 698, 929 |
| AflIII | ACRYGT | 1 cut(s) | 737 |
| AgsI | TTSAA | 3 cut(s) | 18, 428, 494 |
| AjiI | CACGTC | 1 cut(s) | 275 |
| AjnI | CCWGG | 2 cut(s) | 183, 343 |
| AluBI | AGCT | 4 cut(s) | 81, 146, 811, 885 |
| AluI | AGCT | 4 cut(s) | 81, 146, 811, 885 |
| Alw21I | GWGCWC | 1 cut(s) | 571 |
| Alw26I | GTCTC | 3 cut(s) | 358, 435, 822 |
| AlwI | GGATC | 1 cut(s) | 810 |
| Ama87I | CYCGRG | 1 cut(s) | 329 |
| AoxI | GGCC | 1 cut(s) | 409 |
| ApeKI | GCWGC | 1 cut(s) | 26 |
| ApoI | RAATTY | 2 cut(s) | 61, 518 |
| Asp718I | GGTACC | 1 cut(s) | 467 |
| AspLEI | GCGC | 1 cut(s) | 786 |
| AspS9I | GGNCC | 2 cut(s) | 410, 721 |
| AvaI | CYCGRG | 1 cut(s) | 329 |
| AvaII | GGWCC | 1 cut(s) | 721 |
| BanI | GGYRCC | 1 cut(s) | 467 |
| Bbv12I | GWGCWC | 1 cut(s) | 571 |
| BbvI | GCAGC | 1 cut(s) | 38 |
| BccI | CCATC | 4 cut(s) | 215, 242, 287, 659 |
| BceAI | ACGGC | 2 cut(s) | 695, 712 |
| BciT130I | CCWGG | 2 cut(s) | 185, 345 |
| BclI | TGATCA | 1 cut(s) | 900 |
| BcoDI | GTCTC | 3 cut(s) | 358, 435, 822 |
| BfaI | CTAG | 1 cut(s) | 822 |
| BisI | GCNGC | 1 cut(s) | 27 |
| BlsI | GCNGC | 1 cut(s) | 28 |
| Bme1390I | CCNGG | 2 cut(s) | 185, 345 |
| Bme18I | GGWCC | 1 cut(s) | 721 |
| BmeT110I | CYCGRG | 1 cut(s) | 329 |
| BmgBI | CACGTC | 1 cut(s) | 275 |
| BmgT120I | GGNCC | 2 cut(s) | 410, 721 |
| BmiI | GGNNCC | 2 cut(s) | 469, 638 |
| BmrFI | CCNGG | 2 cut(s) | 185, 345 |
| BmsI | GCATC | 1 cut(s) | 259 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 800, 832 |
| BpuEI | CTTGAG | 1 cut(s) | 521 |
| BsaJI | CCNNGG | 1 cut(s) | 343 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 819, 849 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 418, 698, 929 |
| BseBI | CCWGG | 2 cut(s) | 185, 345 |
| BseDI | CCNNGG | 1 cut(s) | 343 |
| BseGI | GGATG | 1 cut(s) | 180 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 418, 698, 929 |
| BseXI | GCAGC | 1 cut(s) | 38 |
| BsgI | GTGCAG | 1 cut(s) | 309 |
| Bsh1236I | CGCG | 2 cut(s) | 739, 786 |
| BshFI | GGCC | 1 cut(s) | 411 |
| BshNI | GGYRCC | 1 cut(s) | 467 |
| BsiHKAI | GWGCWC | 1 cut(s) | 571 |
| BsiHKCI | CYCGRG | 1 cut(s) | 329 |
| BslFI | GGGAC | 1 cut(s) | 261 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 418, 698, 929 |
| BsmAI | GTCTC | 3 cut(s) | 358, 435, 822 |
| BsmFI | GGGAC | 1 cut(s) | 261 |
| BsnI | GGCC | 1 cut(s) | 411 |
| BsoBI | CYCGRG | 1 cut(s) | 329 |
| Bsp1286I | GDGCHC | 1 cut(s) | 571 |
| Bsp1407I | TGTACA | 1 cut(s) | 615 |
| Bsp143I | GATC | 3 cut(s) | 547, 802, 900 |
| BspACI | CCGC | 6 cut(s) | 583, 699, 719, 786, 825, 850 |
| BspANI | GGCC | 1 cut(s) | 411 |
| BspFNI | CGCG | 2 cut(s) | 739, 786 |
| BspLI | GGNNCC | 2 cut(s) | 469, 638 |
| BspPI | GGATC | 1 cut(s) | 810 |
| BspT107I | GGYRCC | 1 cut(s) | 467 |
| BsrGI | TGTACA | 1 cut(s) | 615 |
| BssECI | CCNNGG | 1 cut(s) | 343 |
| BssMI | GATC | 3 cut(s) | 547, 802, 900 |
| Bst2UI | CCWGG | 2 cut(s) | 185, 345 |
| Bst4CI | ACNGT | 4 cut(s) | 215, 446, 611, 835 |
| Bst6I | CTCTTC | 1 cut(s) | 433 |
| BstAUI | TGTACA | 1 cut(s) | 615 |
| BstC8I | GCNNGC | 3 cut(s) | 144, 585, 788 |
| BstDEI | CTNAG | 2 cut(s) | 77, 667 |
| BstF5I | GGATG | 1 cut(s) | 180 |
| BstFNI | CGCG | 2 cut(s) | 739, 786 |
| BstHHI | GCGC | 1 cut(s) | 786 |
| BstKTI | GATC | 3 cut(s) | 550, 805, 903 |
| BstMAI | GTCTC | 3 cut(s) | 358, 435, 822 |
| BstMBI | GATC | 3 cut(s) | 547, 802, 900 |
| BstNI | CCWGG | 2 cut(s) | 185, 345 |
| BstNSI | RCATGY | 1 cut(s) | 105 |
| BstSCI | CCNGG | 2 cut(s) | 183, 343 |
| BstUI | CGCG | 2 cut(s) | 739, 786 |
| BstV1I | GCAGC | 1 cut(s) | 38 |
| BsuRI | GGCC | 1 cut(s) | 411 |
| BtrI | CACGTC | 1 cut(s) | 275 |
| BtsCI | GGATG | 1 cut(s) | 180 |
| BtsI | GCAGTG | 2 cut(s) | 471, 940 |
| BtsIMutI | CAGTG | 4 cut(s) | 471, 631, 831, 940 |
| Cac8I | GCNNGC | 3 cut(s) | 144, 585, 788 |
| CfoI | GCGC | 1 cut(s) | 786 |
| Cfr13I | GGNCC | 2 cut(s) | 410, 721 |
| Csp6I | GTAC | 3 cut(s) | 468, 616, 711 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 607, 642 |
| CviAII | CATG | 2 cut(s) | 102, 898 |
| CviJI | RGCY | 9 cut(s) | 81, 146, 411, 455, 486, 790, 811, 864, 885 |
| CviKI_1 | RGCY | 9 cut(s) | 81, 146, 411, 455, 486, 790, 811, 864, 885 |
| CviQI | GTAC | 3 cut(s) | 468, 616, 711 |
| DdeI | CTNAG | 2 cut(s) | 77, 667 |
| DpnI | GATC | 3 cut(s) | 549, 804, 902 |
| DpnII | GATC | 3 cut(s) | 547, 802, 900 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 206 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 206 |
| Eam1104I | CTCTTC | 1 cut(s) | 433 |
| EarI | CTCTTC | 1 cut(s) | 433 |
| EciI | GGCGGA | 1 cut(s) | 734 |
| Eco47I | GGWCC | 1 cut(s) | 721 |
| Eco88I | CYCGRG | 1 cut(s) | 329 |
| EcoRII | CCWGG | 2 cut(s) | 183, 343 |
| FaeI | CATG | 2 cut(s) | 105, 901 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 70, 102 |
| FaqI | GGGAC | 1 cut(s) | 261 |
| FatI | CATG | 2 cut(s) | 101, 897 |
| FauI | CCCGC | 2 cut(s) | 576, 779 |
| FbaI | TGATCA | 1 cut(s) | 900 |
| Fnu4HI | GCNGC | 1 cut(s) | 27 |
| FokI | GGATG | 1 cut(s) | 167 |
| Fsp4HI | GCNGC | 1 cut(s) | 27 |
| FspBI | CTAG | 1 cut(s) | 822 |
| GlaI | GCGC | 1 cut(s) | 785 |
| GluI | GCNGC | 1 cut(s) | 27 |
| HaeIII | GGCC | 1 cut(s) | 411 |
| HhaI | GCGC | 1 cut(s) | 786 |
| Hin1II | CATG | 2 cut(s) | 105, 901 |
| Hin6I | GCGC | 1 cut(s) | 784 |
| HinP1I | GCGC | 1 cut(s) | 784 |
| HincII | GTYRAC | 1 cut(s) | 211 |
| HindII | GTYRAC | 1 cut(s) | 211 |
| HinfI | GANTC | 2 cut(s) | 539, 966 |
| Hpy166II | GTNNAC | 3 cut(s) | 211, 607, 847 |
| Hpy188I | TCNGA | 1 cut(s) | 955 |
| Hpy188III | TCNNGA | 2 cut(s) | 331, 806 |
| Hpy8I | GTNNAC | 3 cut(s) | 211, 607, 847 |
| Hpy99I | CGWCG | 1 cut(s) | 530 |
| HpyCH4III | ACNGT | 4 cut(s) | 215, 446, 611, 835 |
| HpyCH4IV | ACGT | 3 cut(s) | 274, 416, 528 |
| HpyCH4V | TGCA | 3 cut(s) | 272, 326, 960 |
| HpyF3I | CTNAG | 2 cut(s) | 77, 667 |
| HpySE526I | ACGT | 3 cut(s) | 274, 416, 528 |
| Hsp92II | CATG | 2 cut(s) | 105, 901 |
| HspAI | GCGC | 1 cut(s) | 784 |
| KpnI | GGTACC | 1 cut(s) | 471 |
| Ksp22I | TGATCA | 1 cut(s) | 900 |
| Kzo9I | GATC | 3 cut(s) | 547, 802, 900 |
| LmnI | GCTCC | 2 cut(s) | 139, 808 |
| Lsp1109I | GCAGC | 1 cut(s) | 38 |
| LweI | GCATC | 1 cut(s) | 259 |
| MaeI | CTAG | 1 cut(s) | 822 |
| MaeII | ACGT | 3 cut(s) | 274, 416, 528 |
| MaeIII | GTNAC | 3 cut(s) | 112, 740, 935 |
| MalI | GATC | 3 cut(s) | 549, 804, 902 |
| MboI | GATC | 3 cut(s) | 547, 802, 900 |
| MboII | GAAGA | 3 cut(s) | 29, 447, 450 |
| MfeI | CAATTG | 4 cut(s) | 18, 375, 428, 970 |
| MhlI | GDGCHC | 1 cut(s) | 571 |
| MluCI | AATT | 9 cut(s) | 18, 30, 61, 375, 428, 507, 518, 619, 970 |
| MluI | ACGCGT | 1 cut(s) | 737 |
| MlyI | GAGTC | 1 cut(s) | 975 |
| MmeI | TCCRAC | 1 cut(s) | 90 |
| MnlI | CCTC | 3 cut(s) | 401, 701, 782 |
| MspR9I | CCNGG | 2 cut(s) | 185, 345 |
| MunI | CAATTG | 4 cut(s) | 18, 375, 428, 970 |
| MvaI | CCWGG | 2 cut(s) | 185, 345 |
| MvnI | CGCG | 2 cut(s) | 739, 786 |
| NdeII | GATC | 3 cut(s) | 547, 802, 900 |
| NlaIII | CATG | 2 cut(s) | 105, 901 |
| NlaIV | GGNNCC | 2 cut(s) | 469, 638 |
| NmuCI | GTSAC | 2 cut(s) | 740, 935 |
| NspI | RCATGY | 1 cut(s) | 105 |
| PaeR7I | CTCGAG | 1 cut(s) | 329 |
| PfeI | GAWTC | 1 cut(s) | 539 |
| PkrI | GCNGC | 1 cut(s) | 28 |
| PleI | GAGTC | 1 cut(s) | 974 |
| PpsI | GAGTC | 1 cut(s) | 974 |
| Psp6I | CCWGG | 2 cut(s) | 183, 343 |
| PspGI | CCWGG | 2 cut(s) | 183, 343 |
| PspN4I | GGNNCC | 2 cut(s) | 469, 638 |
| PspPI | GGNCC | 2 cut(s) | 410, 721 |
| RsaI | GTAC | 3 cut(s) | 469, 617, 712 |
| RsaNI | GTAC | 3 cut(s) | 468, 616, 711 |
| SatI | GCNGC | 1 cut(s) | 27 |
| Sau3AI | GATC | 3 cut(s) | 547, 802, 900 |
| Sau96I | GGNCC | 2 cut(s) | 410, 721 |
| SchI | GAGTC | 1 cut(s) | 975 |
| ScrFI | CCNGG | 2 cut(s) | 185, 345 |
| SduI | GDGCHC | 1 cut(s) | 571 |
| SfaNI | GCATC | 1 cut(s) | 259 |
| Sfr274I | CTCGAG | 1 cut(s) | 329 |
| SinI | GGWCC | 1 cut(s) | 721 |
| SlaI | CTCGAG | 1 cut(s) | 329 |
| SmlI | CTYRAG | 2 cut(s) | 329, 500 |
| SmoI | CTYRAG | 2 cut(s) | 329, 500 |
| Sse9I | AATT | 9 cut(s) | 18, 30, 61, 375, 428, 507, 518, 619, 970 |
| SsiI | CCGC | 6 cut(s) | 583, 699, 719, 786, 825, 850 |
| SspI | AATATT | 1 cut(s) | 390 |
| SspMI | CTAG | 1 cut(s) | 822 |
| StyD4I | CCNGG | 2 cut(s) | 183, 343 |
| TaaI | ACNGT | 4 cut(s) | 215, 446, 611, 835 |
| TaiI | ACGT | 3 cut(s) | 277, 419, 531 |
| TaqI | TCGA | 5 cut(s) | 227, 330, 542, 654, 750 |
| TasI | AATT | 9 cut(s) | 18, 30, 61, 375, 428, 507, 518, 619, 970 |
| TatI | WGTACW | 1 cut(s) | 615 |
| TfiI | GAWTC | 1 cut(s) | 539 |
| TscAI | CASTG | 4 cut(s) | 478, 631, 838, 940 |
| TseFI | GTSAC | 2 cut(s) | 740, 935 |
| TseI | GCWGC | 1 cut(s) | 26 |
| Tsp45I | GTSAC | 2 cut(s) | 740, 935 |
| TspDTI | ATGAA | 1 cut(s) | 179 |
| TspGWI | ACGGA | 2 cut(s) | 815, 954 |
| TspRI | CASTG | 4 cut(s) | 478, 631, 838, 940 |
| VpaK11BI | GGWCC | 1 cut(s) | 721 |
| XapI | RAATTY | 2 cut(s) | 61, 518 |
| XceI | RCATGY | 1 cut(s) | 105 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 904 |
| XhoI | CTCGAG | 1 cut(s) | 329 |
| XspI | CTAG | 1 cut(s) | 822 |